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At least 127 records · Page 7

Temporal RNA Integrity Analysis of Archived Spaceflight Biological Samples from ALSDA from 1991 to 2016

The purpose of this study is to assess the quality of spaceflight tissues stored in Ames Life Science Data Archive (ALSDA) freezers. Garnering information for downstream functional analysis such as generation of omics datasets from tissues is, in part, dependent on the state of sample preservation. To assess the viability of a select group of tissues, RNA integrity number (RIN) values were calculated for RNA extracted from rodent livers. Rat livers from Spacelab Life Sciences 1 (SLS-1) and mouse livers from Commercial Biomedical Test Module 3 (CBTM-3), Rodent Research 1 (RR1), and Rodent Research 3 (RR3) were tested. It was found that mean RIN values from CBTM3, RR1, and RR3 were suitable for downstream functional analysis (RIN greater than 5) while the mean RIN value for SLS-1 was not (RIN equal to 2.5 plus or minus 0.1). Information from this study could lay the foundation for future efforts in determining the types of assays that are most appropriate for different tissues in ALSDA freezers, which would maximize the scientific return on rare spaceflight samples.

ALSDA↗

From Data to Knowledge in Earth Science, Planetary Science, and Astronomy

This paper examines three NASA science data archive systems from the Earth, planetary, and astronomy domains, and discusses the various efforts underway to provide their science communities with not only better access to their holdings, but also with the services they need to interpret the data and understand their physical meaning. The paper identifies problems common to all three domains and suggests ways that common standards, technologies, and even implementations be leveraged to benefit each other.

remote sensing data↗

Unlocking the Secrets of Space Biology: From the Twin Study to Groundbreaking Open Science Discoveries

In this interdisciplinary lecture, we will delve into the fascinating world of Space Biology and the realm of Open Science at NASA. Join us as we explore the profound insights gained from the groundbreaking twin study, which was published several years ago and continues to shape our understanding of spaceflight's impact on human health. We will highlight the study's key findings and contextualize them alongside more recent research endeavors, including the remarkable Inspiration 4 mission and several comprehensive meta-analysis publications enabled by the NASA GeneLab Omics database and the Ames Life Science Data Archive for physiological and phenotypic data.

Omics↗

The new space and Earth science information systems at NASA's archive

The on-line interactive systems of the National Space Science Data Center (NSSDC) are examined. The worldwide computer network connections that allow access to NSSDC users are outlined. The services offered by the NSSDC new technology on-line systems are presented, including the IUE request system, Total Ozone Mapping Spectrometer (TOMS) data, and data sets on astrophysics, atmospheric science, land sciences, and space plasma physics. Plans for future increases in the NSSDC data holdings are considered.

Green, James L.↗

The new space and earth science information systems at NASA's archive

The on-line interactive systems of the National Space Science Data Center (NSSDC) are examined. The worldwide computer network connections that allow access to NSSDC users are outlined. The services offered by the NSSDC new technology on-line systems are presented, including the IUE request system, ozone TOMS data, and data sets on astrophysics, atmospheric science, land sciences, and space plasma physics. Plans for future increases in the NSSDC data holdings are considered.

Green, James L.↗

Stewardship Best Practices for Improved Discovery and Reuse of Heterogeneous and Cross-Disciplinary Earth System Data

Some of the Earth system data products such as those from NASA airborne and field investigations (a.k.a. campaigns), are highly heterogeneous and cross-disciplinary, making the data extremely challenging to manage. For example, airborne and field campaign measurements tend to be sporadic over a period of time, with large gaps. Data products generated are of various processing levels and utilized for a wide range of inter- and cross-disciplinary research and applications. Data and derived products have been historically stored in a variety of domain-specific standard (and some non-standard) formats and in various locations such as NASA Distributed Active Archive Centers (DAACs), NASA airborne science facilities, field archives, or even individual scientists’ computer hard drives. As a result, airborne and field campaign data products have often been managed and represented differently, making it onerous for data users to find, access, and utilize campaign data. Some difficulties in discovering and accessing the campaign data originate from the incomplete data product and contextual metadata that may contain details relevant to the campaign (e.g. campaign acronym and instrument deployment locations), but tend to lack other significant information needed to understand conditions surrounding the data. Such details can be burdensome to locate after the conclusion of a campaign. Utilizing consistent terminology, essential for improved discovery and reuse, is also challenging due to the variety of involved disciplines. To help address the aforementioned challenges faced by many repositories and data managers handling airborne and field data, this presentation will describe stewardship practices developed by the Airborne Data Management Group (ADMG) within the Interagency Implementation and Advanced Concepts Team (IMPACT) under the NASA’s Earth Science Data systems (ESDS) Program.

best practices↗

Defining the Core Archive Data Standards of the International Planetary Data Alliance (IPDA)

A goal of the International Planetary Data Alliance (lPDA) is to develop a set of archive data standards that enable the sharing of scientific data across international agencies and missions. To help achieve this goal, the IPDA steering committee initiated a six month proj ect to write requirements for and draft an information model based on the Planetary Data System (PDS) archive data standards. The project had a special emphasis on data formats. A set of use case scenarios were first developed from which a set of requirements were derived for the IPDA archive data standards. The special emphasis on data formats was addressed by identifying data formats that have been used by PDS nodes and other agencies in the creation of successful data sets for the Planetary Data System (PDS). The dependency of the IPDA information model on the PDS archive standards required the compilation of a formal specification of the archive standards currently in use by the PDS. An ontology modelling tool was chosen to capture the information model from various sources including the Planetary Science Data Dictionary [I] and the PDS Standards Reference [2]. Exports of the modelling information from the tool database were used to produce the information model document using an object-oriented notation for presenting the model. The tool exports can also be used for software development and are directly accessible by semantic web applications.

ontology↗

NLSP: NASA Life Sciences Portal

NASA’s Life Sciences Ports (NLSP) serves the scientific community by providing curated data from space life science experiment. The Human Research Program (HRP) with the help of NLSP is currently transforming their life sciences data archive systems and processes to improve compliance with the FAIR principles. Some of these improvements will at the same time support the twin pillars of Open Science: transparency of methods and reproducibility of results. This video is a high level overview of the NLSP for existing and new users.

Life Sciences data↗

NASA Life Sciences Portal (NLSP): Supporting Scientific Transparency and Reproducibility

NASA’s Life Sciences Ports (NLSP) serves the scientific community by providing curated data from space life science experiment. The Human Research Program (HRP) with the help of NLSP is currently transforming their life sciences data archive systems and processes to improve compliance with the FAIR principles [1]. Some of these improvements will at the same time support the twin pillars of Open Science [2]: transparency of methods and reproducibility of results. Scientific transparency is marked by the easily intelligible communication of what has been investigated: what were the procedures for collecting sample and the characteristics of samples collected? what kinds of measurements were made, what were the environmental conditions of the measurements? What were the analysis techniques of the collected data? Reproducibility of the results and findings from the investigation requires a high level of transparency for all but the simplest investigations; the slightest deviation in communicating and replicating complex experimental procedures or data analyses can often yield quite different data and even findings, thwarting their validation. One of the ways the NLSP is aiming to improve the communication of scientific information is through the use of ontology-driven metadata. Ontologies are powerful, graph-based knowledge representation structures, which can be leveraged to increase data interoperability, the area of the FAIR principles in which many data systems most lack compliance. Over the past decade, there has been a concerted effort in the biomedical community to develop modular and narrowly focused domain and application-specific ontologies in a common, open-source framework, the Open Biological and Biomedical Ontology (OBO) Foundry [3]. The open sharing and modular nature of this effort promises huge increases in harmonized data sharing for systems that leverage these models. Which is in line with the FAIR Data Principles of Findability, Accessibility, Interoperability, and Reuse for scientific data management and stewardship. 1. Wilkinson, M.D., et al., The FAIR Guiding Principles for scientific data management and stewardship. Sci Data, 2016. 3: p. 160018. 2. National Academies of Sciences, E. and Medicine, Open Science by Design: Realizing a Vision for 21st Century Research. 2018, Washington, DC: The National Academies Press. 232. 3. Smith, B., et al., The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration. Nat Biotechnol, 2007. 25(11): p. 1251-5.

Life Sciences data↗

NASA Life Sciences Portal (NLSP): Supporting Scientific Transparency and Reproducibility

NASA’s Life Sciences Ports (NLSP) serves the scientific community by providing curated data from space life science experiment. The Human Research Program (HRP) with the help of NLSP is currently transforming their life sciences data archive systems and processes to improve compliance with the FAIR principles [1]. Some of these improvements will at the same time support the twin pillars of Open Science [2]: transparency of methods and reproducibility of results. Scientific transparency is marked by the easily intelligible communication of what has been investigated: what were the procedures for collecting sample and the characteristics of samples collected? what kinds of measurements were made, what were the environmental conditions of the measurements? What were the analysis techniques of the collected data? Reproducibility of the results and findings from the investigation requires a high level of transparency for all but the simplest investigations; the slightest deviation in communicating and replicating complex experimental procedures or data analyses can often yield quite different data and even findings, thwarting their validation. One of the ways the NLSP is aiming to improve the communication of scientific information is through the use of ontology-driven metadata. Ontologies are powerful, graph-based knowledge representation structures, which can be leveraged to increase data interoperability, the area of the FAIR principles in which many data systems most lack compliance. Over the past decade, there has been a concerted effort in the biomedical community to develop modular and narrowly focused domain and application-specific ontologies in a common, open-source framework, the Open Biological and Biomedical Ontology (OBO) Foundry [3]. The open sharing and modular nature of this effort promises huge increases in harmonized data sharing for systems that leverage these models. Which is in line with the FAIR Data Principles of Findability, Accessibility, Interoperability, and Reuse for scientific data management and stewardship.

Life Sciences data↗

NASA's Rodent Research Project: Validation of Capabilities for Conducting Long Duration Experiments in Space

Research using rodents is an essential tool for advancing biomedical research on Earth and in space. Prior rodent experiments on the Shuttle were limited by the short flight duration. The International Space Station (ISS) provides a new platform for conducting rodent experiments under long duration conditions. Rodent Research (RR)-1 was conducted to validate flight hardware, operations, and science capabilities that were developed at the NASA Ames Research Center. Twenty C57BL6J adult female mice were launched on Sept 21, 2014 in a Dragon Capsule (SpaceX-4), then transferred to the ISS for a total time of 21-22 days (10 commercial mice) or 37 days (10 validation mice). Tissues collected on-orbit were either rapidly frozen or preserved in RNAlater at -80C (n2group) until their return to Earth. Remaining carcasses on-orbit were rapidly frozen for dissection post-flight. The three controls groups at Kennedy Space Center consisted of: Basal mice euthanized at the time of launch, Vivarium controls housed in standard cages, and Ground Controls (GC) housed in flight hardware within an environmental chamber. Upon return to Earth, there were no differences in body weights between Flight (FLT) and GC at the end of the 37 days in space. Liver enzyme activity levels of FLT mice and all control mice were similar in magnitude to those of the samples that were processed under optimal conditions in the laboratory. Liver samples dissected on-orbit yielded high quality RNA (RIN8.99+-0.59, n7). Liver samples dissected post-flight from the intact, frozen FLT carcasses yielded RIN of 7.27 +- 0.52 (n6). Additionally, wet weights of various tissues were measured. Adrenal glands and spleen showed no significant differences in FLT compared to GC although thymus and livers weights were significantly greater in FLT compared to GC. Over 3,000 tissue aliquots collected post-flight from the four groups of mice were deposited into the Ames Life Science Data Archives for future Biospecimen Sharing Program. Together, the RR validation flight successfully demonstrates the capability to support long-duration experimentation on the ISS to achieve both basic science and biomedical objectives.

spaceflight↗

EOS MLS Science Data Processing System: A Description of Architecture and Capabilities

This paper describes the architecture and capabilities of the Science Data Processing System (SDPS) for the EOS MLS. The SDPS consists of two major components--the Science Computing Facility and the Science Investigator-led Processing System. The Science Computing Facility provides the facilities for the EOS MLS Science Team to perform the functions of scientific algorithm development, processing software development, quality control of data products, and scientific analyses. The Science Investigator-led Processing System processes and reprocesses the science data for the entire mission and delivers the data products to the Science Computing Facility and to the Goddard Space Flight Center Earth Science Distributed Active Archive Center, which archives and distributes the standard science products.

Microwave Limb Sounder (MLS)↗

Restoration of Apollo Data by the Lunar Data Project/PDS Lunar Data Node: An Update

The Apollo 11, 12, and 14 through 17 missions orbited and landed on the Moon, carrying scientific instruments that returned data from all phases of the missions, included long-lived Apollo Lunar Surface Experiments Packages (ALSEPs) deployed by the astronauts on the lunar surface. Much of these data were never archived, and some of the archived data were on media and in formats that are outmoded, or were deposited with little or no useful documentation to aid outside users. This is particularly true of the ALSEP data returned autonomously for many years after the Apollo missions ended. The purpose of the Lunar Data Project and the Planetary Data System (PDS) Lunar Data Node is to take data collections already archived at the NASA Space Science Data Coordinated Archive (NSSDCA) and prepare them for archiving through PDS, and to locate lunar data that were never archived, bring them into NSSDCA, and then archive them through PDS. Preparing these data for archiving involves reading the data from the original media, be it magnetic tape, microfilm, microfiche, or hard-copy document, converting the outmoded, often binary, formats when necessary, putting them into a standard digital form accepted by PDS, collecting the necessary ancillary data and documentation (metadata) to ensure that the data are usable and well-described, summarizing the metadata in documentation to be included in the data set, adding other information such as references, mission and instrument descriptions, contact information, and related documentation, and packaging the results in a PDS-compliant data set. The data set is then validated and reviewed by a group of external scientists as part of the PDS final archive process. We present a status report on some of the data sets that we are processing.

Lunar↗

Availability of previously lost data and metadata from the Apollo Lunar Surface Experiments Package (ALSEP)

Fourteen types of geophysical instruments deployed at the Apollo 12, 14, 15, 16, and 17 sites by the astronauts for long-term observation were collectively called the Apollo Lunar Surface Experiments Package (ALSEP). These instruments were active from the times of their deployment (November 1969–December 1972) to September 1977. At the conclusion of the experiments, the raw instrument data received from the Moon prior to March 1976 were left unarchived. Portions of the data processed by the principal investigators (PIs) of these experiments had been archived at the NASA Space Science Data Coordinated Archive (NSSDCA) in various formats. The unarchived data, residing then on open-reel magnetic tapes, became lost in the decades since, along with much of the metadata (the supporting documents for these data). We have recently recovered 440 of the previously lost tapes, containing raw ALSEP instrument data from April through June of 1975. Here we describe the data extracted from these tapes and summarize the data products generated for archiving at the NASA Planetary Data System (PDS) and NSSDCA, along with their historical narrative. In addition, we have reformatted many of the datasets delivered to NSSDCA by the PIs in the 1970s for archiving at the PDS. Finally, we have compiled an online searchable repository of ALSEP-related documents by optically scanning tens of thousands of pages of them kept at the Lunar and Planetary Institute in Texas.

S. Nagihara↗

The Field Guide to NASA’s Life Sciences Data Repositories

For over 30 years, NASA has invested in life sciences research both in space and on the ground. Data accessibility is an important tool for researchers, and NASA has committed to preserving this vital resource for ongoing use. The Life Sciences Data Archive’s multi-center collaboration between NASA’s Johnson Space Center, Ames Research Center, and Kennedy Space Center is geared toward preserving unique and high-value data from a wide variety of disciplines, data collection methods, and species within NASA’s Life Sciences Portal (NLSP). The data generated by the Human Research Program (HRP) require a systematic approach to data preservation that accounts for diverse data sources, formats, physical storage requirements, and security and privacy protections. This poster presentation will provide a guide to the repositories where the various types of human, non-human animal, plant, and microbial data NASA generates are archived and tips for navigating these data collections. Topics will include where different types of data, metadata, and biospecimens are archived or preserved, how the federated repositories work together as a data preservation ecosystem, and how researchers can access each repository’s collections.

Robert S Beaton↗

A Field Guide to NASA’s Life Sciences Data Repositories

For over 30 years, NASA has invested in life sciences research both in space and on the ground. Data accessibility is an important tool for researchers, and NASA has committed to preserving this vital resource for ongoing use. The Life Sciences Data Archive’s multi-center collaboration between NASA’s Johnson Space Center, Ames Research Center, and Kennedy Space Center is geared toward preserving unique and high-value data from a wide variety of disciplines, data collection methods, and species within NASA’s Life Sciences Portal (NLSP). The data generated by the Human Research Program (HRP) require a systematic approach to data preservation that accounts for diverse data sources, formats, physical storage requirements, and security and privacy protections. This poster presentation will provide a guide to the repositories where the various types of human, non-human animal, plant, and microbial data NASA generates are archived and tips for navigating these data collections. Topics will include where different types of data, metadata, and biospecimens are archived or preserved, how the federated repositories work together as a data preservation ecosystem, and how researchers can access each repository’s collections.

LSDA↗

NASA’s Human Data Repositories: An In Depth Look at the New Data Request Process

As NASA transitions its focus to travel back to the moon and on to new destinations, the need to ensure the capture, analysis, and application of research and medical data is of greater urgency than at any other previous time. In this era of limited resources and challenging schedules, the Human Research Program (HRP), based at NASA’s Johnson Space Center (JSC), recognizes the need to extract the greatest possible amount of information from the data already captured. To this end, the HRP Chief Scientist Office (CSO), HRP Program Planning and Control (PP&C) Office, and the Space Medicine Operations Division have been working together to make reuse of both research data and medical monitoring data more accessible to the user community through the Life Science Data Archive (LSDA) and the Lifetime Surveillance of Astronaut Health (LSAH) Repositories. The task of both LSDA and LSAH repositories is to acquire, preserve, and distribute retrospective research (LSDA) and medical (LSAH) data and information both within the NASA community and to the science community at large, for knowledge discovery, retrospective analysis, and planning of future research studies. An additional goal is to encourage collaboration with non-NASA institutions also faced with enhancing human performance in extreme environments. In September 2022, the LSDA website and its contents transitioned to a new NASA Life Sciences Portal (https://nlsp.nasa.gov/explore/lsdahome). This site continues to feature publicly releasable information such as non-attributable datasets, experiment descriptions (from Project Mercury to ISS, as well as from multiple flight analog missions), descriptions of medical monitoring data, and LSAH newsletters (1992 - 2022). The website also provides an updated portal to request additional research and medical data not accessible from the public website. This presentation will provide an in-depth look at the new system as it relates to finding and requesting retrospective data. We will also detail processes from making a request to delivering data for different types of data requests (i.e., attributable, or non-attributable). This includes descriptions of various approval boards, what information and actions the requestor is responsible for, and key milestones in making data available for reuse.

D. M. Thomas↗

NASA Tech Briefs, December 2007

Topics include: Ka-Band TWT High-Efficiency Power Combiner for High-Rate Data Transmission; Reusable, Extensible High-Level Data-Distribution Concept; Processing Satellite Imagery To Detect Waste Tire Piles; Monitoring by Use of Clusters of Sensor-Data Vectors; Circuit and Method for Communication Over DC Power Line; Switched Band-Pass Filters for Adaptive Transceivers; Noncoherent DTTLs for Symbol Synchronization; High-Voltage Power Supply With Fast Rise and Fall Times; Waveguide Calibrator for Multi-Element Probe Calibration; Four-Way Ka-Band Power Combiner; Loss-of-Control-Inhibitor Systems for Aircraft; Improved Underwater Excitation-Emission Matrix Fluorometer; Metrology Camera System Using Two-Color Interferometry; Design and Fabrication of High-Efficiency CMOS/CCD Imagers; Foam Core Shielding for Spacecraft CHEM-Based Self-Deploying Planetary Storage Tanks Sequestration of Single-Walled Carbon Nanotubes in a Polymer PPC750 Performance Monitor Application-Program-Installer Builder Using Visual Odometry to Estimate Position and Attitude Design and Data Management System Simple, Script-Based Science Processing Archive Automated Rocket Propulsion Test Management Online Remote Sensing Interface Fusing Image Data for Calculating Position of an Object Implementation of a Point Algorithm for Real-Time Convex Optimization Handling Input and Output for COAMPS Modeling and Grid Generation of Iced Airfoils Automated Identification of Nucleotide Sequences Balloon Design Software Rocket Science 101 Interactive Educational Program Creep Forming of Carbon-Reinforced Ceramic-Matrix Composites Dog-Bone Horns for Piezoelectric Ultrasonic/Sonic Actuators Benchtop Detection of Proteins Recombinant Collagenlike Proteins Remote Sensing of Parasitic Nematodes in Plants Direct Coupling From WGM Resonator Disks to Photodetectors Using Digital Radiography To Image Liquid Nitrogen in Voids Multiple-Parameter, Low-False-Alarm Fire-Detection Systems Mosaic-Detector-Based Fluorescence Spectral Imager Plasmoid Thruster for High Specific-Impulse Propulsion Analysis Method for Quantifying Vehicle Design Goals Improved Tracking of Targets by Cameras on a Mars Rover Sample Caching Subsystem Multistage Passive Cooler for Spaceborne Instruments GVIPS Models and Software Stowable Energy-Absorbing Rocker-Bogie Suspensions

Source record↗