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At least 127 records · Page 7

A Work-Efficient Parallel Sparse Matrix-Sparse Vector Multiplication Algorithm

We design and develop a work-efficient multithreaded algorithm for sparse matrix-sparse vector multiplication (SpMSpV) where the matrix, the input vector, and the output vector are all sparse. SpMSpV is an important primitive in the emerging GraphBLAS standard and is the workhorse of many graph algorithms including breadth-first search, bipartite graph matching, and maximal independent set. As thread counts increase, existing multithreaded SpMSpV algorithms can spend more time accessing the sparse matrix data structure than doing arithmetic. Our shared-memory parallel SpMSpV algorithm is work efficient in the sense that its total work is proportional to the number of arithmetic operations required. The key insight is to avoid each thread individually scan the list of matrix columns. Our algorithm is simple to implement and operates on existing column-based sparse matrix formats. It performs well on diverse matrices and vectors with heterogeneous sparsity patterns. A high-performance implementation of the algorithm attains up to 15x speedup on a 24-core Intel Ivy Bridge processor and up to 49x speedup on a 64-core Intel KNL manycore processor. In contrast to implementations of existing algorithms, the performance of our algorithm is sustained on a variety of different input types include matrices representing scale-free and high-diameter graphs.

97 MATHEMATICS AND COMPUTING↗

Cr3+ doped ZnGa2O4 far-red emission phosphor-in-glass: Toward high-power and color-stable plant growth LEDs with responds to all of phytochrome

Highlights: • A high-power and color-stable far-red emission phosphor-convertor LEDs is proposed. • The Cr{sup 3+} ion as the center of luminescence not only increase choice in plant lighting but also provides far-red light. • The ZGO:Cr{sup 3+}-PiG shows a quantum efficiency of ∼52.8%. • The high-power plant growth LEDs was fabricated, triggering providing broad spectral range for plant growth LEDs. - Abstract: In present work, a series of luminescent glass ceramic plates were prepared via phosphor-in-glass (PiG) technology, in which included the phosphor of ZnGa{sub 2}O{sub 4}:Cr{sup 3+} (ZGO:Cr{sup 3+}) and glass host with composition of 30SiO{sub 2}-30ZnO-22B{sub 2}O{sub 3}-12BaO-6Al{sub 2}O{sub 3} as matrix. The structure of ZnGa{sub 2}O{sub 4}:Cr{sup 3+}-based PiG (ZGO:Cr{sup 3+}-PiG) samples are characterized by powder X-ray diffraction, scanning electron microscope, and energy dispersive spectrometer mapping. These phosphors are found to be embedded in glass matrix without interfacial reaction. In addition, the ZGO:Cr{sup 3+}-PiG sample shows a quantum efficiency of ∼52.8% and its fluorescence intensity maintains 68.2% when temperature reaching 150 °C. Finally, high-power and color-stable far-red emission plant growth LEDs was fabricated by ZGO:Cr{sup 3+}-PiG and 400 nm near-UV LED chip, which spectra matches well the absorption of plant's photosynthetic pigments. More importantly, it responds to all of phytochrome, triggering providing broad spectral range for plant growth LEDs.

36 MATERIALS SCIENCE↗

Properties of Cerium Hydroxides from Matrix Infrared Spectra and Electronic Structure Calculations

Reactions of laser ablated cerium atoms with hydrogen peroxide or hydrogen and oxygen mixtures diluted in argon and condensed at 4 K produced the Ce(OH) 3 and Ce(OH) 2 molecules and Ce(OH) 2 + cation as major products. Additional minor products were identified as the Ce(OH) 4 , HCeO, and OCeOH molecules. These new species were identified from their matrix infrared spectra with D 2 O 2 , D 2 , and 18 O 2 isotopic substitution and correlating observed frequencies with values calculated by density functional theory. We find that the amounts of Ce(OH) 3 and of the Ce(OH) 2 + cation increase on UV ($λ$ > 220 nm) photolysis, while Ce(OH) 2 , Ce(OH) 4 , and HCeO are photosensitive. The observed major species for Ce are in the +III or +II oxidation state, and the minor product, Ce(OH) 4 , is in the +IV oxidation state. The calculations for the vibrational frequencies with the B3LYP functional agree well with the experiment. The NBO analysis shows significant backbonding to the metal 4f and 5d orbitals for the closed shell species. Most open shell species have the excess spin in the 4f with paired spin in the 5d due to backbonding. The heats of formation of the observed species were derived from the available data from experiment and the calculated reaction energies. The major products in this study are different from similar reactions for Th where the tetrahydroxide was the major species.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Plant Cell Growth and Cell Wall Enlargement

Irreversible cell enlargement begins with cell wall loosening which induces wall stress relaxation, leading to cell water uptake and cell enlargement. Growing cell walls consist of a cohesive network of cellulose microfibrils embedded in hydrophilic pectins and cellulose-binding hemicelluloses. Models of the growing cell wall are provisional hypotheses about how these wall polymers interact to make a strong yet extensible wall. Recent results clarify how wall strength, plasticity and elasticity depend mostly on the stretching, straightening and sliding of cellulose microfibril networks in the wall. Passive sliding of cellulose microfibrils is facilitated by nonenzymic proteins named expansins while various enzymes modify pectins and hemicelluloses, altering their interactions with each other and with cellulose. Growth cessation is correlated with reduced expression of genes that promote wall loosening as well as changes in the direction of cellulose deposition and the structure of matrix polysaccharides, leading to a less extensible cell wall.

59 BASIC BIOLOGICAL SCIENCES↗

Experimental Study of Spontaneous Emission in the Bragg Multiple Quantum Wells Structure of InAs Monolayers Embedded in a GaAs Matrix

Time-resolved photoluminescence of a Bragg structure of InAs-monolayer quantum wells in GaAs matrix was experimentally studied with. Comparison of luminescence patterns from the side and from the surface of a sample showed that Bragg-type ordering of quantum wells leads to a substantial alteration of the photoluminescence spectra including appearance of additional radiative modes. The sample side spectrum contains a single line corresponding to a ground state of an exciton. The surface spectrum at high excitation levels a new radiation line appears whose frequency and propagation angle correspond to the Bragg condition for quantum wells. A numerical calculation of the modal Purcell factor explains why the radiative emission amplification occurs only at a set of specific angles and frequencies, as opposed to the whole range that satisfies the Bragg condition.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Structural characterization of HIV-1 matrix mutants implicated in envelope incorporation

During the late phase of HIV-1 infection, viral Gag polyproteins are targeted to the plasma membrane (PM) for assembly. Gag localization at the PM is a prerequisite for the incorporation of the envelope protein (Env) into budding particles. Gag assembly and Env incorporation are mediated by the N-terminal myristoylated matrix (MA) domain of Gag. Nonconservative mutations in the trimer interface of MA (A45E, T70R, and L75G) were found to impair Env incorporation and infectivity, leading to the hypothesis that MA trimerization is an obligatory step for Env incorporation. Conversely, Env incorporation can be rescued by a compensatory mutation in the MA trimer interface (Q63R). The impact of these MA mutations on the structure and trimerization properties of MA is not known. In this study, we employed NMR spectroscopy, X-ray crystallography, and sedimentation techniques to characterize the structure and trimerization properties of HIV-1 MA A45E, Q63R, T70R, and L75G mutant proteins. NMR data revealed that these point mutations did not alter the overall structure and folding of MA but caused minor structural perturbations in the trimer interface. Analytical ultracentrifugation data indicated that mutations had a minimal effect on the MA monomer–trimer equilibrium. The high-resolution X-ray structure of the unmyristoylated MA Q63R protein revealed hydrogen bonding between the side chains of adjacent Arg-63 and Ser-67 on neighboring MA molecules, providing the first structural evidence for an additional intermolecular interaction in the trimer interface. These findings advance our knowledge of the interplay of MA trimerization and Env incorporation into HIV-1 particles.

60 APPLIED LIFE SCIENCES↗

Characterization of silver/polystyrene nanocomposites prepared by in situ bulk radical polymerization

Graphical abstract: - Highlights: • Synthesis and characterization of polystyrene nanocomposites based on Ag nanoparticles. • The glass transition temperature decreased in nanocomposites with respect to the pure polymer. • Resistance of the polymer to thermal degradation enhanced with Ag nanoparticles content. - Abstract: Nanocomposites (NCs) with different content of silver nanoparticles (Ag NPs) embeded in polystyrene (PS) matrix were prepared by in situ bulk radical polymerization. The nearly monodisperse Ag NPs protected with oleylamine were synthesized via organic solvo-thermal method and further used as a filler. The as-prepared spherical Ag NPs with diameter of 7.0 ± 1.5 nm were well dispersed in the PS matrix. The structural properties of the resulting Ag/PS NCs were characterized by transmission electron microscope (TEM) and Fourier transform infrared (FTIR) spectroscopy, while optical properties were characterized using optical absorption measurements. The gel permeation chromatography (GPC) measurements showed that the presence of Ag NPs stabilized with oleylamine has no influence on the molecular weight and polydispersity of the PS matrix. The influence of silver content on the thermal properties of Ag/PS NCs was investigated by thermogravimetric analysis (TGA) and differential scanning calorimetry (DSC). The results indicated that resistance of PS to thermal degradation was improved upon incorporation of Ag NPs. The Ag/PS NCs have lower glass transition temperatures than neat PS because loosely packed oleylamine molecules at the interface caused the increase of free volume and chain segments mobility near the surface of Ag NPs.

36 MATERIALS SCIENCE↗

Positive semidefinite tensor factorizations of the two-electron integral matrix for low-scaling ab initio electronic structure

Tensor factorization of the 2-electron integral matrix is a well-known technique for reducing the computational scaling of ab initio electronic structure methods toward that of Hartree-Fock and density functional theories. The simplest factorization that maintains the positive semidefinite character of the 2-electron integral matrix is the Cholesky factorization. In this paper, we introduce a family of positive semidefinite factorizations that generalize the Cholesky factorization. Using an implementation of the factorization within the parametric 2-RDM method [D. A. Mazziotti, Phys. Rev. Lett. 101, 253002 (2008)], we study several inorganic molecules, alkane chains, and potential energy curves and find that this generalized factorization retains the accuracy and size extensivity of the Cholesky factorization, even in the presence of multi-reference correlation. The generalized family of positive semidefinite factorizations has potential applications to low-scaling ab initio electronic structure methods that treat electron correlation with a computational cost approaching that of the Hartree-Fock method or density functional theory.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Crazing of nanocomposites with polymer-tethered nanoparticles

The crazing behavior of polymer nanocomposites formed by blending polymer grafted nanoparticles with an entangled polymer melt is studied by molecular dynamics simulations. We focus on the three key differences in the crazing behavior of a composite relative to the pure homopolymer matrix, namely, a lower yield stress, a smaller extension ratio, and a grafted chain length dependent failure stress. The yield behavior is found to be mostly controlled by the local nanoparticle-grafted polymer interfacial energy, with the grafted polymer-polymer matrix interfacial structure being of little to no relevance. Increasing the attraction between nanoparticle core and the grafted polymer inhibits void nucleation and leads to a higher yield stress. In the craze growth regime, the presence of “grafted chain” sections of ≈100 monomers alters the mechanical response of composite samples, giving rise to smaller extension ratios and higher drawing stresses than for the homopolymer matrix. As a result, the dominant failure mechanism of composite samples depends strongly on the length of the grafted chains, with disentanglement being the dominant mechanism for short chains, while bond breaking is the failure mode for chain lengths >10N e , where N e is the entanglement length.

36 MATERIALS SCIENCE↗

Photoconductivity of Si/Ge multilayer structures with Ge quantum dots pseudomorphic to the Si matrix

Longitudinal photoconductivity spectra of Si/Ge multilayer structures with Ge quantum dots grown pseudomorphically to the Si matrix are studied. Lines of optical transitions between hole levels of quantum dots and Si electronic states are observed. This allowed us to construct a detailed energy-level diagram of electron-hole levels of the structure. It is shown that hole levels of pseudomorphic Ge quantum dots are well described by the simplest 'quantum box' model using actual sizes of Ge islands. The possibility of controlling the position of the long-wavelength photosensitivity edge by varying the growth parameters of Si/Ge structures with Ge quantum dots is determined.

36 MATERIALS SCIENCE↗

The Stomatopod Dactyl Club: A Formidable Damage-Tolerant Biological Hammer

Nature has evolved efficient strategies to synthesize complex mineralized structures that exhibit exceptional damage tolerance. One such example is found in the hypermineralized hammer-like dactyl clubs of the stomatopods, a group of highly aggressive marine crustaceans. The dactyl clubs from one species, Odontodactylus scyllarus, exhibit an impressive set of characteristics adapted for surviving high-velocity impacts on the heavily mineralized prey on which they feed. Consisting of a multiphase composite of oriented crystalline hydroxyapatite and amorphous calcium phosphate and carbonate, in conjunction with a highly expanded helicoidal organization of the fibrillar chitinous organic matrix, these structures display several effective lines of defense against catastrophic failure during repetitive high-energy loading events.

36 MATERIALS SCIENCE↗

Structural study of Ni- or Mg-based complexes incorporated within UiO-66-NH{sub 2} framework and their impact on hydrogen sorption properties

Nickel and magnesium acetylacetonate molecular complexes were post-synthetically incorporated into microporous zirconium-based MOF (UiO-66-NH{sub 2}) in order to introduce active open-metal sites for hydrogen sorption. Elemental analysis, nitrogen physisorption and DFT calculations revealed that 5 molecules of Ni(acac){sub 2} or 2 molecules of Mg(acac){sub 2} were incorporated into one unit cell of UiO-66-NH{sub 2}. {sup 1}H–{sup 13}C CPMAS and {sup 1}H MAS NMR spectroscopy showed that, although embedded within the pores, both Ni- and Mg-complexes interacted with the UiO-66-NH{sub 2} framework only through weak van der Waals bonds. Inclusion of metal complexes led to the decrease of hydrogen sorption capacities in Ni-modified as well as in Mg-modified samples in comparison with the parent UiO-66-NH{sub 2}. The isosteric hydrogen adsorption enthalpy slightly increased in the case of Ni-modified material, but not in the case of Mg-modified analogue. - Graphical abstract: A post-synthesis impregnation of Mg- and Ni-acetylacetonate complexes performed on zirconium-based MOF UiO-66-NH{sub 2} does influence the hydrogen sorption performance with respect to the parent matrix. The structural study revealed that Mg- and Ni-acetylacetonate molecules interact with zirconium-terephthalate framework only by weak interactions and they are not covalently bonded to aminoterephthalate ligand. Still, they remain confined into the pores even after hydrogen sorption experiments. - Highlights: • Mg- and Ni-acetylacetonate molecules embedded in the pores of UiO-66-NH{sub 2} by PSM. • Molecules of complexes interact with framework only by van der Waals interactions. • Type/structure of deposited metal-complex impact hydrogen enthalpy of adsorption.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

The AGR-3/4 fission product transport irradiation experiment

AGR-3/4 was the combined third and fourth planned irradiations for the U.S. Department of Energy Advanced Gas Reactor (AGR) Fuel Development and Qualification Program. The primary purpose of the AGR program is to support the development and qualification of tristructural isotropic (TRISO) coated particle fuel for use in High Temperature Gas-cooled Reactors. AGR-3/4 was designed as a fission product transport irradiation experiment whose specific objectives were to: (1) irradiate fuel containing UCO (uranium oxycarbide) designed-to-fail (DTF) fuel particles that provide a fixed source of fission products for subsequent transport through compact matrix and structural graphite materials, (2) assess the effects of sweep gas impurities on fuel performance and fission product transport, (3) provide irradiated fuel and material samples for post-irradiation examination and post-irradiation heating, and (4) support the refinement of fuel performance and fission product transport models. The AGR-3/4 test train was irradiated in the northeast flux trap of the Advanced Test Reactor at Idaho National Laboratory for 369.1 effective full power days from December 2011 to April 2014. The experiment was successful in achieving its specification goals in terms of burnup and fast fluence levels reached at the end of irradiation and fuel temperature levels maintained throughout irradiation: peak compact burnup reached 15.27% fissions per initial heavy-metal atom and peak compact fast fluence reached 5.32 × 10 25 n/m 2 (E > 0.18 MeV), while the time-average volume-average temperatures of the compacts ranged from 854 to 1345°C. Fission product release to birth ratios reached values in the 10 -4 - 10 -3 range early during irradiation as the DTF particles started to fail. In conclusion, subsequent post-irradiation examination will provide information on fission product distributions in matrix and core graphite materials, enabling refinement of fission product transport models.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Experimental and Theoretical Investigations of Magnetic Properties of Co Ferrite/Polyvinyl Alcohol Nanocomposites

Cobalt ferrite nanoparticles (NPs) have been synthesized by the modified co-precipitation technique in the presence of the polyvinyl alcohol (PVA) matrix. The structural and magnetic properties of NPs are tunable by means of interaction between the polymer and the surface of NPs. Magnetic properties of NPs were simulated using the accurate Monte Carlo (MC) method. In addition, the magnetic anisotropy constant has been obtained by means of the law of approach to saturation magnetization (LAS). The experimental and theoretical results are in good agreement with each other and show that the as-synthesized NPs are single domain and approximately non-interacting. The anisotropy constant and size of the NPs increase by increasing the concentration of precursors in the reaction medium. Nanocomposites have been characterized by X-ray diffraction (XRD) and Fourier transform infrared spectroscopy (FT-IR). Hysteresis loops were investigated at room temperature using a vibrating sample magnetometer (VSM). The crystallite size of single-domain NPs is lower than 20 nm, and the obtained results from FT-IR confirmed the interaction between PVA and the surface of the particles. These approximately non-interacting NPs are useful for magnetic data storage.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Uncertainty in inventories for life cycle assessment: State‐of‐the‐art, challenges, and new technologies

Uncertainty is a critical factor that can hinder the quality and potential applications of life cycle assessment (LCA) results. A prominent source of uncertainty stems from the life cycle inventory (LCI) data. Various methodologies exist to estimate the uncertainty associated with LCI data, primarily based on the widely used structured pedigree matrix approach or the computationally intensive Monte Carlo simulation. This perspective review explores how new technologies (e.g., computational algorithms and data collection methods) from data science and related fields can contribute to identifying, quantifying, and reducing uncertainty in LCI modeling. A brief overview of the sources of uncertainty in LCI modeling and how they are addressed in current LCA practice is provided. Additionally, several new technologies are identified, and the potential benefits of their implementation in reducing uncertainties in LCI modeling are discussed. This perspective review concludes by identifying potential areas that require further development for these technologies.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

AAPM Truth‐based CT (TrueCT) reconstruction grand challenge

Background: This Special Report summarizes the 2022, AAPM grand challenge on Truth-based CT image reconstruction. Purpose: To provide an objective framework for evaluating CT reconstruction methods using virtual imaging resources consisting of a library of simulated CT projection images of a population of human models with various diseases. Methods: Two hundred unique anthropomorphic, computational models were created with varied diseases consisting of 67 emphysema, 67 lung lesions, and 66 liver lesions. The organs were modeled based on clinical CT images of real patients. The emphysematous regions were modeled using segmentations from patient CT cases in the COPDGene Phase I dataset. For the lung and liver lesion cases, 1–6 malignant lesions were created and inserted into the human models, with lesion diameters ranging from 5.6 to 21.9 mm for lung lesions and 3.9 to 14.9 mm for liver lesions. The contrast defined between the liver lesions and liver parenchyma was 82 ± 12 HU, ranging from 50 to 110 HU. Similarly, the contrast between the lung lesions and the lung parenchyma was defined as 781 ± 11 HU, ranging from 725 to 805 HU. For the emphysematous regions, the defined HU values were −950 ± 17 HU ranging from −918 to −979 HU. The developed human models were imaged with a validated CT simulator. The resulting CT sinograms were shared with the participants. The participants reconstructed CT images from the sinograms and sent back their reconstructed images. Further, the reconstructed images were then scored by comparing the results against the corresponding ground truth values. The scores included both task-generic (root mean square error [RMSE] and structural similarity matrix [SSIM]), and task-specific (detectability index [d’] and lesion volume accuracy) metrics. For the cases with multiple lesions, the measured metric was averaged across all the lesions. To combine the metrics with each other, each metric was normalized to a range of 0 to 1 per disease type, with “0” and “1” being the worst and best measured values across all cases of the disease type for all received reconstructions. Results: The True-CT challenge attracted 52 participants, out of which 5 successfully completed the challenge and submitted the requested 200 reconstructions. Across all participants and disease types, SSIM absolute values ranged from 0.22 to 0.90, RMSE from 77.6 to 490.5 HU, d’ from 0.1 to 64.6, and volume accuracy ranged from 1.2 to 753.1 mm3. The overall scores demonstrated that participant “A” had the best performance in all categories, except for the metrics of d’ for lung lesions and RMSE for liver lesions. Participant “A” had an average normalized score of 0.41 ± 0.22, 0.48 ± 0.32, and 0.42 ± 0.33 for the emphysema, lung lesion, and liver lesion cases, respectively. Conclusions: The True-CT challenge successfully enabled objective assessment of CT reconstructions with the unique advantage of access to a diverse population of diseased human models with known ground truth. This study highlights the significant potential of virtual imaging trials in objective assessment of medical imaging technologies.

60 APPLIED LIFE SCIENCES↗

Nanosized carriers for hydrophobic compounds based on mesoporous silica: synthesis and adsorption properties

MCM-41 type mesoporous silica particles were obtained using a template method in an alkaline medium and cetyltrimethylammonium bromide as a matrix. The structural and adsorption characteristics of the mesoporous material were studied by dynamic light scattering, scanning electron microscopy, low-temperature adsorption—desorption of nitrogen, IR spectroscopy, and simultaneous thermal analysis. It was shown that the obtained mesoporous material possesses high porosity with the specific pore volume in excess of 1 cm{sup 3} g{sup −1}. It was established that the size of silica particles does not exceed 200 nm, which is a value acceptable for the penetration of drugs through cell membranes. The optimal compositions of aqueous dispersions of MCM-41 with minimal sedimentation processes were determined. A drug (indomethacin) was encapsulated into the silica pores using the precipitation method at various temperatures (40 and 60 °C), the quantitative parameters of loading efficiency were calculated. The infl uence of temperature on the encapsulation ability was demonstrated.

77 NANOSCIENCE AND NANOTECHNOLOGY↗

Microstructure and hardness evolution induced by annealing of ion irradiated LiTaO 3

We report the evolution of the microstructure and mechanical properties of low-energy heavy-ion-irradiated LiTaO 3 crystals annealed at various temperatures was investigated by transmission electron microscopy (TEM) observations and nanoindentation tests to extend the applications of irradiated LiTaO 3 crystals. Before annealing, randomly distributed voids formed in an approximately 200 nm thick region at the end of the ion irradiation range, which was attributed to preferential absorption of interstitials by the amorphous-crystalline interface. After annealing, a new directional diffusion path of defects was identified, resulting in a void string. Furthermore, void string diffusion to the free surface was also found during the annealing temperature increase process, which offers a potential application in designing custom sized-thickness exfoliation at the nanoscale. Meanwhile, two competing processes were identified during the annealing process: epitaxial recrystallization from the amorphous-crystalline interface and grain nucleation process in the amorphous region, which formed phases different from the matrix crystal structure, resulting in an interaction between them. Furthermore, the hardness of irradiated samples was also found to be affected by the annealing process; in particular, a hardness decrease induced by the interstitial Fe ions in the recrystallized region was also confirmed, which can improve the processability of samples for further application.

36 MATERIALS SCIENCE↗