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NASA NTRS2017

Atmospheric Correction for Hyperspectral Ocean Color Retrieval with Application to the Hyperspectral Imager for the Coastal Ocean (HICO)

The classical multi-spectral Atmospheric Correction (AC) algorithm is inadequate for the new generation of spaceborne hyperspectral sensors such as NASA's first hyperspectral Ocean Color Instrument (OCI) onboard the anticipated Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) satellite mission. The AC process must estimate and remove the atmospheric path radiance contribution due to the Rayleigh scattering by air molecules and scattering by aerosols from the measured top-of-atmosphere (TOA) radiance, compensate for the absorption by atmospheric gases, and correct for reflection and refraction of the air-sea interface. In this work, we present and evaluate an improved AC for hyperspectral sensors developed within NASA's Sea-viewing Wide Field-of-view Sensor (SeaWiFS) Data Analysis System software package (SeaDAS). The improvement is based on combining the classical AC approach of multi-spectral capabilities to correct for the atmospheric path radiance, extended to hyperspectral, with a gas correction algorithm to compensate for absorbing gases in the atmosphere, including water vapor. The SeaDAS-hyperspectral version is capable of operationally processing the AC of any hyperspectral airborne or spaceborne sensor. The new algorithm development was evaluated and assessed using the Hyperspectral Imager for Coastal Ocean (HICO) scenes collected at the Marine Optical BuoY (MOBY) site, and other SeaWiFS Bio-optical Archive and Storage System (SeaBASS) and AERosol Robotic NETwork - Ocean Color (AERONET-OC) coastal sites. A hyperspectral vicarious calibration was applied to HICO, showing the validity and consistency of HICO's ocean color products. The hyperspectral AC capability is currently available in SeaDAS to the scientific community at https://oceancolor.gsfc.nasa.gov/.

Ocean Color↗

NASA NTRS2021

A Visual Tour of Carbon Export by Sinking Particles

To better quantify the ocean's biological carbon pump, we resolved the diversity of sinking particles that transport carbon into the ocean's interior, their contribution to carbon export, and their attenuation with depth. Sinking particles collected in sediment trap gel layers from four distinct ocean ecosystems were imaged, measured, and classified. The size and identity of particles was used to model their contribution to particulate organic carbon (POC) flux. Measured POC fluxes were reasonably predicted by particle images. Nine particle types were identified, and most of the compositional variability was driven by the relative contribution of aggregates, long cylindrical fecal pellets, and salp fecal pellets. While particle composition varied across locations and seasons, the entire range of compositions was measured at a single well-observed location in the subarctic North Pacific over one month, across 500 m of depth. The magnitude of POC flux was not consistently associated with a dominant particle class, but particle classes did influence flux attenuation. Long fecal pellets attenuated most rapidly with depth whereas certain other classes attenuated little or not at all with depth. Small particles (<100 m) consistently contributed ~5% to total POC flux in samples with higher magnitude fluxes. The relative importance of these small particle classes (spherical mini pellets, short oval fecal pellets, and dense detritus) increased in low flux environments (up to 46% of total POC flux). Imaging approaches that resolve large variations in particle composition across ocean basins, depth, and time will help to better parameterize biological carbon pump models

Carbon flux↗

NASA NTRS2013

Retrieving Marine Inherent Optical Properties from Satellites Using Temperature and Salinity-dependent Backscattering by Seawater

Time-series of marine inherent optical properties (IOPs) from ocean color satellite instruments provide valuable data records for studying long-term time changes in ocean ecosystems. Semi-analytical algorithms (SAAs) provide a common method for estimating IOPs from radiometric measurements of the marine light field. Most SAAs assign constant spectral values for seawater absorption and backscattering, assume spectral shape functions of the remaining constituent absorption and scattering components (e.g., phytoplankton, non-algal particles, and colored dissolved organic matter), and retrieve the magnitudes of each remaining constituent required to match the spectral distribution of measured radiances. Here, we explore the use of temperature- and salinity-dependent values for seawater backscattering in lieu of the constant spectrum currently employed by most SAAs. Our results suggest that use of temperature- and salinity-dependent seawater spectra elevate the SAA-derived particle backscattering, reduce the non-algal particles plus colored dissolved organic matter absorption, and leave the derived absorption by phytoplankton unchanged.

Passive Remote Sensing↗

NASA NTRS2021

Adaptive Data Screening for Multi-Angle Polarimetric Aerosol and Ocean Color Remote Sensing Accelerated by Automatic Differentiation

Remote sensing measurements from multi-angle polarimeters (MAPs) contain rich aerosol microphysical property information, and these sensors have been used to perform retrievals in optically complex atmosphere and ocean systems. Previous studies have concluded that, generally, five moderately separated viewing angles in each spectral band provide sufficient accuracy for aerosol property retrievals, with performance gradually saturating as angles are added above that threshold. The Hyper-Angular Rainbow Polarimeter (HARP) instruments provide high angular sampling with a total of 90-120 unique angles across four bands, a capability developed mainly for liquid cloud retrievals. In practice, not all view angles are optimal for aerosol retrievals due to impacts of clouds, sun glint, and other impediments. The many viewing angles of HARP can provide resilience to these effects, if the impacted views are screened from the dataset, as the remaining views may be sufficient for successful analysis. In this study, we discuss how the number of available viewing angles impacts aerosol and ocean color retrieval uncertainties, as applied to two versions of the HARP instrument. AirHARP is an airborne prototype that was deployed in the ACEPOL field campaign, while HARP2 is an instrument in development for the upcoming NASA Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) mission. Based on synthetic data, we find that a total of 20-30 angles across all bands (i.e. five to eight viewing angles per band) are sufficient to achieve good retrieval performance. Following from this result, we develop an adaptive multi-angle polarimetric data screening (MAPDS) approach to evaluate data quality by comparing measurements with their best-fitted forward model. The FastMAPOL retrieval algorithm is used to retrieve scene geophysical values, by matching an efficient, deep learning-based, radiative transfer emulator to observations. The data screening method effectively identifies and removes viewing angles affected by thin cirrus clouds and other anomalies, improving retrieval performance. This was tested with AirHARP data, and we found agreement with the High Spectral Resolution Lidar-2 (HSRL-2) aerosol data. The data screening approach can be applied to modern satellite remote sensing missions, such as PACE, where a large amount of multi-angle, hyperspectral, polarimetric measurements will be collected.

multi-angle polarimeter↗

NASA NTRSDate not supplied

CyanoSCape: Freshwater Phytoplankton and Floating Aquatic Vegetation Biodiversity

In Southern Africa, the impacts of anthropogenic activities on biodiversity and ecosystem services are exacerbated by the climate crisis. Rapid land use change and the lack of emphasis on environmentally sustainable agricultural practices has hindered hydrological processes and compromised riverine and aquatic ecosystems. This poses obvious risks to natural/indigenous aquatic biodiversity and long-term ecosystem sustainability. Phytoplankton serve as the foundation of the freshwater food web with zooplankton as consumers, which feed fish, invertebrates, and so on up the food chain that comprises the biodiversity of the freshwater system that serves as habitat for biodiversity as well. The diversity of phytoplankton (microscopic organisms) includes photosynthesizing bacteria (cyanobacteria), plant-like diatoms, dinoflagellates, and green algae. Nutrient run-off from agricultural fertilizers and urban overflows, warm temperatures, abundant light availability and compromised hydrological systems provide an ideal environment for cyanobacteria to flourish. Increased prevalence of cyanobacteria, due to both natural and anthropogenic causes, can incur significant effects on the biodiversity of the overall phytoplankton assemblage. These bloom forming algae can significantly outcompete other phytoplankton classes in warmer and eutrophic waters where they are quick to dominate the freshwater system. Eutrophication and toxic cyanobacteria blooms (cyanoHABs) in the inland waters of the Greater Cape Floristic Region (GCFR) incur significant effects on the biodiversity of the overall phytoplankton assemblage and provide a favorable environment forthe overgrowth of floating aquatic vegetation (FAV), which is often invasive and associated with reduced aquatic biodiversity. The algal biodiversity of the GCFR’s freshwater systems is not well characterized. Hyperspectral optical observations are expected to facilitate the improvement of current phytoplankton functional type retrievals significantly, as the sensitivity is sufficient that the distinctive, fine spectral features of different phytoplankton groups can be detected. This will enable testing emerging algorithms and inform the development of new algorithms for use with upcoming hyperspectral satellite missions in this decade. Innovations in optical sensor sensitivity and next generation machine learning capabilities considerably enhance the potential for accurate and rapid detection of phytoplankton, namely the presence, extent, and diversity of cyanobacteria present in cyanoHABs and additionally, invasive FAV. Upcoming hyperspectral satellite missions such as NASA’s Surface Biology and Geology (SBG), Plankton, Aerosol, Cloud, ocean Ecosystem (PACE), and the European Space Agency’s Copernicus Hyperspectral Imaging Mission (CHIME) will provide imagery with unprecedented spectral and spatial resolution which will further enable the discovery of linkages between the seasonality and dynamics of HABs and FAV. The overarching goal of this project is to utilize hyperspectral data, with recently developed and next-generation algorithms, to determine the biodiversity of freshwater systems phytoplankton assemblage with emphasis on genus level distinction, as well as monitor the prevalence and diversity of FAV.

CyanoSCape↗

NASA NTRSDate not supplied

Pulse Response of the Short-Wave Infrared Detection System of the Ocean Color Instrument for the NASA Pace Mission

The Ocean Color Instrument (OCI) on NASA’s Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) mission is a hyperspectral Earth imager with a spatial resolution of 1 km x 1 km and a spectral resolution of 5 nm in 2.5 nm steps over 342-887 nm. In addition, OCI provides 7 discrete bands in the 940-2260 nm Short-Wave InfraRed (SWIR) range. The front-end optical imager is a rotating mirror-based system that images the ground scene onto a slit with an instantaneous field of view of 16 km x 1 km. For the SWIR bands, the slit-image is re-imaged onto a 16x1 micro-lens array that effectively acts as the focal plane since each lens element is fiber coupled to wavelength filtered InGaAs and HgCdTe Photo Diodes (PDs). The pulse response of the detection system is critical to OCI SWIR performance. We find that PDs introduce an inherent slow tail in the pulse response due to slow diffusion moving carriers in their n and p regions. We show that this introduces response errors ranging from 1 down to 0.01 % for up to tens of science pixels after the pulse depending on the PD design and materials. It is shown that the response is distinctly different for the InGaAs and HgCdTe PDs. We explain how the front-end design can further increase this error. Finally, we detail the cause of the slow pulse response tail, how to model it, its impact on OCI performance and how it is characterized and corrected to meet OCI requirements.

ocean color↗

NASA NTRS2023

Pulse Response of the Short-Wave Infrared Detection System of the Ocean Color Instrument for the NASA PACE Mission

ocean color↗

NASA NTRS1987

Estimating population size of Pygoscelid Penguins from TM data

An estimate was made toward a continent wide population of penguins. The results indicate that Thematic Mapper data can be used to identify penguin rookeries due to the unique reflectance properties of guano. Strong correlations exist between nesting populations and rookery area occupied by the birds. These correlations allow estimation of the number of nesting pairs in colonies. The success of remote sensing and biometric analyses leads one to believe that a continent wide estimate of penguin populations is possible based on a timely sample employing ground based and remote sensing techniques. Satellite remote sensing along the coastline may well locate previously undiscovered penguin nesting sites, or locate rookeries which have been assumed to exist for over a half century, but never located. Observations which found that penguins are one of the most sensitive elements in the complex of Southern Ocean ecosystems motivated this study.

Olson, Charles E., Jr.↗

NASA NTRS1989

A remote sensing analysis of Adelie penguin rookeries

The Adelie penguin (Pygoscelis adeliae) makes up the vast majority of bird biomass in the Antarctic. As a major consumer of krill, these birds play an important role in the Antarctic food web, and they have been proposed as an indicator species of the vitality of the Southern Ocean ecosystem. This study explores the terrestrial habitat of the Adelie penguin as a target for remote sensing reconnaissance. Laboratory and ground-level reflectance measurements of Antarctic materials found in and around penguin rookeries were examined in detail. These analyses suggested data transformations which helped separate penguin rookeries from surrounding areas in Landsat Thematic Mapper imagery. The physical extent of penguin rookeries on Ross and Beaufort Islands, Antarctic, was estimated from the satellite data and compared to published estimates of penguin populations. The results suggest that TM imagery may be used to identify previously undiscovered penguin rookeries, and the imagery may provide a means of developing new population estimation methods for Antarctic ornithology.

Schwaller, Mathew R.↗

NASA NTRS2003

Dust Emissions, Transport, and Deposition Simulated with the NASA Finite-Volume General Circulation Model

Mineral dust aerosols have radiative impacts on Earth's atmosphere, have been implicated in local and regional air quality issues, and have been identified as vectors for transporting disease pathogens and bringing mineral nutrients to terrestrial and oceanic ecosystems. We present for the first time dust simulations using online transport and meteorological analysis in the NASA Finite-Volume General Circulation Model (FVGCM). Our dust formulation follows the formulation in the offline Georgia Institute of Technology-Goddard Global Ozone Chemistry Aerosol Radiation and Transport Model (GOCART) using a topographical source for dust emissions. We compare results of the FVGCM simulations with GOCART, as well as with in situ and remotely sensed observations. Additionally, we estimate budgets of dust emission and transport into various regions.

Colarco, Peter↗

NASA NTRS2007

MODIS Aerosol Observations used to Constrain Dust Distributions and Lifecycle in the NASA GEOS-5 Model

Approximately 240 Tg of mineral dust aerosol are transported annually from Saharan Africa to the Atlantic Ocean. Dust affects the Earth radiation budget, and plays direct (through scattering and absorption of radiation) and indirect (through modification of cloud properties and environment) roles in climate. Deposition of dust to the surface provides an important nutrient source to terrestrial and oceanic ecosystems. Dust is additionally a contributor to adverse air quality. Among the tools toward understanding the lifecycle and impacts of mineral dust aerosols are numerical models. Important constraints on these models come from quantitative satellite observations, like those from the space-based Moderate Resolution Imaging Spectroradiometer (MODIS). In particular, Kauhan et al. [2005] used MODIS aerosol observations to infer transport and deposition fluxes of Saharan dust over the Atlantic, Caribbean, and Amazonian basins. Those observations are used here to constrain the transport of dust and its interannual variability simulated in the NASA GEOS-5 general circulation model and data assimilation system. Significant uncertainty exists in the MODIS-derived fluxes, however, due to uncertainty in the wind fields provided by meteorological analyses in this region. That same uncertainty in the wind fields is manifest in our GEOS-5 simulations of dust distributions. Here we use MODIS observations to investigate the seasonality and location of the Saharan dust plume and explore through sensitivity analysis of our model the meteorological controls on the dust distribution, including dust direct radiative effects and sub-gridscale source and sink processes.

Colarco, P.↗

NASA NTRS2009

Skill Assessment of a Spectral Ocean-Atmosphere Radiative Model

Ocean phytoplankton, detrital material, and water absorb and scatter light spectrally. The Ocean- Atmosphere Spectral Irradiance Model (OASIM) is intended to provide surface irradiance over the oceans with sufficient spectral resolution to support ocean ecology, biogeochemistry, and heat exchange investigations, and of sufficient duration to support inter-annual and decadal investigations. OASIM total surface irradiance (integrated 200 nm to 4 microns) was compared to in situ data and three publicly available global data products at monthly 1-degree resolution. OASIM spectrally-integrated surface irradiance had root mean square (RMS) difference= 20.1 W/sq m (about 11%), bias=1.6 W/sq m (about 0.8%), regression slope= 1.01 and correlation coefficient= 0.89, when compared to 2322 in situ observations. OASIM had the lowest bias of any of the global data products evaluated (ISCCP-FD, NCEP, and ISLSCP 11), and the best slope (nearest to unity). It had the second best RMS, and the third best correlation coefficient. OASIM total surface irradiance compared well with ISCCP-FD (RMS= 20.7 W/sq m; bias=-11.4 W/sq m, r=0.98) and ISLSCP II (RMS =25.2 W/sq m; bias= -13.8 W/sq m; r=0.97), but less well with NCEP (RMS =43.0 W/sq m ;bias=-22.6 W/sq m; x=0.91). Comparisons of OASIM photosynthetically available radiation (PAR) with PAR derived from SeaWiFS showed low bias (-1.8 mol photons /sq m/d, or about 5%), RMS (4.25 mol photons /sq m/d ' or about 12%), near unity slope (1.03) and high correlation coefficient (0.97). Coupled with previous estimates of clear sky spectral irradiance in OASIM (6.6% RMS at 1 nm resolution), these results suggest that OASIM provides reasonable estimates of surface broadband and spectral irradiance in the oceans, and can support studies on ocean ecosystems, carbon cycling, and heat exchange.

Gregg, Watson, W.↗

NASA NTRS2013

Contemplating Synergistic Algorithms for the NASA ACE Mission

ACE is a proposed Tier 2 NASA Decadal Survey mission that will focus on clouds, aerosols, and precipitation as well as ocean ecosystems. The primary objective of the clouds component of this mission is to advance our ability to predict changes to the Earth's hydrological cycle and energy balance in response to climate forcings by generating observational constraints on future science questions, especially those associated with the effects of aerosol on clouds and precipitation. ACE will continue and extend the measurement heritage that began with the A-Train and that will continue through Earthcare. ACE planning efforts have identified several data streams that can contribute significantly to characterizing the properties of clouds and precipitation and the physical processes that force these properties. These include dual frequency Doppler radar, high spectral resolution lidar, polarimetric visible imagers, passive microwave and submillimeter wave radiometry. While all these data streams are technologically feasible, their total cost is substantial and likely prohibitive. It is, therefore, necessary to critically evaluate their contributions to the ACE science goals. We have begun developing algorithms to explore this trade space. Specifically, we will describe our early exploratory algorithms that take as input the set of potential ACE-like data streams and evaluate critically to what extent each data stream influences the error in a specific cloud quantity retrieval.

precipitation↗

NASA NTRS2011

Optical Component Performance for the Ocean Radiometer for Carbon Assessment (ORCA)

The Ocean Radiometer for Carbon Assessment (ORCA) is a new design for the next generation remote sensing of ocean biology and biogeochemistry. ORCA is configured to meet all the measurement requirements of the Decadal Survey Aerosol, Cloud, and Ecology (ACE), the Ocean Ecosystem (OES) radiometer and the Pro-ACE climate data continuity mission (PACE). Under the auspices of a 2007 grant from NASA Research Opportunity in Space and Earth Science (ROSES) and the Instrument Incubator Program (IIP), a team at the Goddard Space Flight Center (GSFC) has been working on a functional prototype with flight-like fore and aft optics and scan mechanisms. As part of the development efforts to bring ORCA closer to a flight configuration and in order to reduce cost, we have conducted component-level optical testing using standard spectrophotometers and system-level characterizations using non-flight commercial off-the-shelf (COTS) focal plane array detectors. Although these arrays would not be able to handle flight data rates, they are adequate for optical alignment and performance testing. The purpose of this presentation is to describe the results of this testing performed at GSFC and the National Institute of Standards and Technology (NIST) at the component and system level. Specifically, we show results for ORCA's spectral calibration ranging from the near UV, visible, and near-infrared spectral region.

Quijada, Manuel A.↗

NASA NTRS2017

Modeling Solar Energetic Particle Events Using ENLIL Heliosphere Simulations

Solar energetic particle (SEP) event modeling (SEPMOD) has gained renewed attention in part because of the availability of a decade of multipoint measurements from STEREO (Solar TErrestrial RElations Observatory) and L1 (Lagrangian point 1) spacecraft at 1 AU (Astronomical Unit). These observations are coupled with improving simulations of the geometry and strength of heliospheric shocks obtained by using coronagraph images to send erupted material into realistic solar wind backgrounds. The STEREO and ACE (Aerosol, Cloud systems, ocean Ecosystems) measurements in particular have highlighted the sometimes surprisingly widespread nature of SEP events. It is thus an opportune time for testing SEP models, which typically focus on protons approximately 1-100 megaelectronvolts, toward both physical insight to these observations and potentially useful space radiation environment forecasting tools. Some approaches emphasize the concept of particle acceleration and propagation from close to the Sun, while others emphasize the local field line connection to a traveling, evolving shock source. Among the latter is the previously introduced SEPMOD treatment, based on the widely accessible and well-exercised WSA-ENLIL (Wang-Sheeley-Arge-ENLIL)-cone model. SEPMOD produces SEP proton time profiles at any location within the ENLIL domain. Here we demonstrate a SEPMOD version that accommodates multiple, concurrent shock sources occurring over periods of several weeks. The results illustrate the importance of considering longer-duration time periods and multiple CME (Coronal Mass Ejection) contributions in analyzing, modeling, and forecasting SEP events.

Luhmann, J. G.↗

NASA NTRS2018

Developing a Community of Practice for Applied Uses of Future PACE Data to Address Food Security Challenges

Ocean color satellite measurements have yielded valuable information about the base of the marine food web for over 20 years. The Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) mission is building an advanced spectrometer to further refine ecosystem monitoring. Higher spectral resolution data from PACE will enable identification of additional marine biological indicators and their response to multiple stressors to guide sustainable management. Seafood is an important source of protein for a significant number of people. Wild catches cannot match increasing demand and their sustainability is in question. Aquaculture is an ever more important industry to feed the world's population. We share early efforts to engage a community of practice around food security to increase satellite data product use in support of resource management, business decisions, and policy analysis. Understanding the needs of applied scientists as well as non-traditional users of satellite data early in the PACE mission process will improve planning and preparation for a broader user base and hopefully help to mitigate food insecurity.

Schollaert Uz, Stephanie↗

NASA NTRS2018

A Case for Bundle Protocol in Space

NASA, through the Advanced Exploration Systems (AES) project, is investing in the development and infusion of delay tolerant networking (DTN) protocols for use on future space flight missions. The cornerstone of the DTN suite is the Bundle Protocol which provides network layer addressing and routing of data blocks. In 2017, the Plankton, Aerosol, Cloud, and Ocean Ecosystem (PACE) mission was selected as the first in-house robotic science mission to implement the Bundle Protocol for downlink of housekeeping telemetry. One year into the design and incorporation of the Bundle Protocol on PACE, this presentation makes a case for using the Bundle Protocol for communication with future space assets. Specifically, the use of the Bundle Protocol (1) simplifies relaying data through store and forward routing and custody transfer; (2) simplifies downlink management through delivery guarantees; and (3) simplifies storage services through block level interactions with memory devices.

Swinski, J. P.↗

NASA NTRS2018

PACE Technical Report Series, Volume 5: Mission Formulation Studies

This chapter summarizes the mission architecture for the Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) mission, ranging from its scientific rationale to the history of its realized conception to itspresent-day organization and management. This volume in the PACE Technical Report series focuses ontrade studies that informed the formulation of the mission in its pre-Phase A (2014-2016; pre-formulation:define a viable and affordable concept) and Phase A (2016-2017; concept and technology development).With that in mind, this chapter serves to introduce the mission by providing: a brief summary of thescience drivers for the mission; a history of the direction of the mission to NASA's Goddard Space Flight Center (GSFC); a synopsis of the mission's and instruments' management and development structures; and a brief description of the primary components and elements that form the foundation ofthe mission, encompassing the major mission segments (space, ground, and science data processing) and their roles in integration, testing, and operations.

Cetinic, Ivona↗