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At least 1,261 records · Page 70

Spatial validation reveals poor predictive performance of large-scale ecological mapping models

Mapping aboveground forest biomass is central for assessing the global carbon balance. However, current large-scale maps show strong disparities, despite good validation statistics of their underlying models. Here, we attribute this contradiction to a flaw in the validation methods, which ignore spatial autocorrelation (SAC) in data, leading to overoptimistic assessment of model predictive power. To illustrate this issue, we reproduce the approach of large-scale mapping studies using a massive forest inventory dataset of 11.8 million trees in central Africa to train and validate a random forest model based on multispectral and environmental variables. A standard nonspatial validation method suggests that the model predicts more than half of the forest biomass variation, while spatial validation methods accounting for SAC reveal quasi-null predictive power. This study underscores how a common practice in big data mapping studies shows an apparent high predictive power, even when predictors have poor relationships with the ecological variable of interest, thus possibly leading to erroneous maps and interpretations.

biomass↗

Rupture Dynamics Simulations for Shallow Crustal Earthquakes

In this study we perform simulations of rupture dynamics for shallow crustal earthquakes. The objective is to investigate the implication of multi-scale and depth-dependent stress drop variations on rupture dynamics, and creation of strong motion generation areas (SMGAs) and long period ground motion generation areas (LMGAs) for a M6.7crustal earthquake on a strike slip vertical fault. In our fault rupture simulation we used heterogenous stress drop models with correlated stochastic perturbations, following the work of Pitarka et al. (2009). The stress model with multiscale variability is designed to accommodate high-stress drop asperity areas and small-scale spatial stress variations. The stress drop and size of asperities are based on the IM2011 (Irikura and Miyake, 2011) recipe.

58 GEOSCIENCES↗

Automated Verification of Spatial Resolution in Remotely Sensed Imagery

Image spatial resolution characteristics can vary widely among sources. In the case of aerial-based imaging systems, the image spatial resolution characteristics can even vary between acquisitions. In these systems, aircraft altitude, speed, and sensor look angle all affect image spatial resolution. Image spatial resolution needs to be verified with estimators that include the ground sample distance (GSD), the modulation transfer function (MTF), and the relative edge response (RER), all of which are key components of image quality, along with signal-to-noise ratio (SNR) and dynamic range. Knowledge of spatial resolution parameters is important to determine if features of interest are distinguishable in imagery or associated products, and to develop image restoration algorithms. An automated Spatial Resolution Verification Tool (SRVT) was developed to rapidly determine the spatial resolution characteristics of remotely sensed aerial and satellite imagery. Most current methods for assessing spatial resolution characteristics of imagery rely on pre-deployed engineered targets and are performed only at selected times within preselected scenes. The SRVT addresses these insufficiencies by finding uniform, high-contrast edges from urban scenes and then using these edges to determine standard estimators of spatial resolution, such as the MTF and the RER. The SRVT was developed using the MATLAB programming language and environment. This automated software algorithm assesses every image in an acquired data set, using edges found within each image, and in many cases eliminating the need for dedicated edge targets. The SRVT automatically identifies high-contrast, uniform edges and calculates the MTF and RER of each image, and when possible, within sections of an image, so that the variation of spatial resolution characteristics across the image can be analyzed. The automated algorithm is capable of quickly verifying the spatial resolution quality of all images within a data set, enabling the appropriate use of those images in a number of applications.

Davis, Bruce↗

Remotely Sensed Spatial Structure as an Indicator of Internal Changes of Vegetation Communities in Desert Landscapes

Desert environments are sensitive to disturbances, and their functions and processes can take many years to recover. Detecting early signs of disturbance is critical, but developing such a capability for expansive remote desert regions is challenging. Using a variogram and 15-cm resolution Visible Atmospherically Resistant Index (VARI) imagery, we examined the usefulness of the spatial structure of desert lands for monitoring early signs of habitat changes using the Riverside East solar energy zone located within Riverside County, California. We tested the method on four habitat types in the region, Parkinsonia florida–Olneya tesota , Chorizanthe rigida–Geraea canescens , Larrea tridentata–Ambrosia dumosa , and Larrea tridentata–Encelia farinosa alliances. The results showed that the sill, range, form, and partial sill of the variogram generated from VARI strongly correlate with overall vegetation cover, average canopy size, canopy size variation, and spatial structure within a dryland habitat, respectively. Establishing a baseline of variogram parameters for each habitat and comparing to subsequent monitoring parameters would be most effective for detecting internal changes because values of variogram parameters would not match absolute values of landscape properties. When monitoring habitats across varying landscape characteristics, a single appropriate image resolution would likely be the resolution that could adequately characterize the habitat dominated by the smallest vegetation. For the variogram generated from VARI, which correlates to vegetation greenness, the sills may indicate the health of vegetation communities. However, further studies are warranted to determine the effectiveness of variograms for monitoring habitat health. Remotely sensed landscape structure obtained from variograms could provide complementary information to traditional methods for monitoring internal changes in dryland vegetation communities.

54 ENVIRONMENTAL SCIENCES↗

Microfocus diffraction from different regions of a protein crystal: structural variations and unit-cell polymorphism

Real macromolecular crystals can be non-ideal in a myriad of ways. This often creates challenges for structure determination, while also offering opportunities for greater insight into the crystalline state and the dynamic behavior of macromolecules. To evaluate whether different parts of a single crystal of a dynamic protein, EutL, might be informative about crystal and protein polymorphism, a microfocus X-ray synchrotron beam was used to collect a series of 18 separate data sets from non-overlapping regions of the same crystal specimen. A principal component analysis (PCA) approach was employed to compare the structure factors and unit cells across the data sets, and it was found that the 18 data sets separated into two distinct groups, with large R values (in the 40% range) and significant unit-cell variations between the members of the two groups. This categorization mapped the different data-set types to distinct regions of the crystal specimen. Atomic models of EutL were then refined against two different data sets obtained by separately merging data from the two distinct groups. A comparison of the two resulting models revealed minor but discernable differences in certain segments of the protein structure, and regions of higher deviation were found to correlate with regions where larger dynamic motions were predicted to occur by normal-mode molecular-dynamics simulations. The findings emphasize that large spatially dependent variations may be present across individual macromolecular crystals. This information can be uncovered by simultaneous analysis of multiple partial data sets and can be exploited to reveal new insights about protein dynamics, while also improving the accuracy of the structure-factor data ultimately obtained in X-ray diffraction experiments.

Thompson, Michael C. (ORCID:0000000260992027)↗

Isotropy of Hubble Expansion in the Early and Late Universe

We test the isotropy of Hubble expansion by combining several probes for the first time, constructing full-sky maps of expansion rate variation using Type Ia supernovae, fundamental plane galaxies, and cosmic microwave background (CMB) temperature fluctuations. We find no hint of anisotropy or correlation between early- and late-Universe expansion across all systematic models. The 99% confidence upper limits on expansion rate anisotropy are 0.39% for low-redshift supernovae, 0.95% for high-redshift CMB, and 0.37% when combined at a 60-degree smoothing scale. A significant anomaly in the fundamental plane residual map may reflect systematics in the current dark energy spectroscopic instrument dataset, as evidenced by the absence of cross-correlation with other tracers and its correlation with spatial density variations.

Zhou, Alan Junzhe [Chicago U.; Chicago U., KICP] (↗

Characterization of Ice Roughness Variations in Scaled Glaze Icing Conditions

Because of the significant influence of surface tension in governing the stability and breakdown of the liquid film in flooded stagnation regions of airfoils exposed to glaze icing conditions, the Weber number is expected to be a significant parameter governing the formation and evolution of ice roughness. To investigate the influence of the Weber number on roughness formation, 53.3-cm (21-in.) and 182.9-cm (72-in.) NACA 0012 airfoils were exposed to flow conditions with essentially the same Weber number and varying stagnation collection efficiency to illuminate similarities of the ice roughness created on the different airfoils. The airfoils were exposed to icing conditions in the Icing Research Tunnel (IRT) at the NASA Glenn Research Center. Following exposure to the icing event, the airfoils were then scanned using a ROMER Absolute Arm scanning system. The resulting point clouds were then analyzed using the self-organizing map approach of McClain and Kreeger (2013) to determine the spatial roughness variations along the surfaces of the iced airfoils. The roughness characteristics on each airfoil were then compared using the relative geometries of the airfoil. The results indicate that features of the ice shape and roughness such as glaze-ice plateau limits and maximum airfoil roughness were captured well by Weber number and collection efficiency scaling of glaze icing conditions. However, secondary ice roughness features relating the instability and waviness of the liquid film on the glaze-ice plateau surface are scaled based on physics that were not captured by the local collection efficiency variations.

Roughness Formation↗

Far field effects of weak spatially periodic inhomogeneities.

Small variations in the properties of an acoustic medium produce cumulative effects that significantly alter wave forms propagating over long distances. To investigate some aspects of these effects, without statistical models, the one-dimensional wave equation with a weak spatially periodic variation in the sound speed is treated. An approximation is developed valid for such weak inhomogeneities over large distances based upon the approximate treatment of a linear differential equation with a periodic coefficient. It is applied to the propagation of an initial step wave and identifies the dispersive nature of the medium which accounts for the cumulative effects.

Friedman, M. B.↗

An Experimental Study of the Fluid Mechanics Associated With Porous Walls

The fluid mechanics of air exiting from a porous material is investigated. The experiments are filter rating dependent, as porous walls with filter ratings differing by about three orders of magnitude are studied. The flow behavior is investigated for its spatial and temporal stability. The results from the investigation are related to jet behavior in at least one of the following categories: (1) jet coalescence effects with increasing flow rate; (2) jet field decay with increasing distance from the porous wall; (3) jet field temporal turbulence characteristics; and (4) single jet turbulence characteristics. The measurements show that coalescence effects cause jet development, and this development stage can be traced by measuring the pseudoturbulence (spatial velocity variations) at any flow rate. The pseudoturbulence variation with increasing mass flow reveals an initial increasing trend followed by a leveling trend, both of which are directly proportional to the filter rating. A critical velocity begins this leveling trend and represents the onset of fully developed jetting action in the flow field. A correlation is developed to predict the onset of fully developed jets in the flow emerging from a porous wall. The data further show that the fully developed jet dimensions are independent of the filter rating, thus providing a length scale for this type of flow field (1 mm). Individual jet characteristics provide another unifying trend with similar velocity decay behavior with distance; however, the respective turbulence magnitudes show vast differences between jets from the same sample. Measurements of the flow decay with distance from the porous wall show that the higher spatial frequency components of the jet field dissipate faster than the lower frequency components. Flow turbulence intensity measurements show an out of phase behavior with the velocity field and are generally found to increase as the distance from the wall is increased.

N Ramachandran↗

ENSO Diversity Simulated in a Revised Cane-Zebiak Model

The El Niño-Southern Oscillation (ENSO) phenomenon features rich sea surface temperature (SST) spatial pattern variations dominated by the Central Pacific (CP) and Eastern Pacific (EP) patterns during its warm phase. Understanding such ENSO pattern diversity has been a subject under extensive research activity. To provide a framework for unveiling the fundamental dynamics of ENSO diversity, an intermediate coupled model based on the Cane-Zebiak-type framework, named RCZ, is established in this study. Compared with the original Cane-Zebiak model, RCZ consists of revised model formulation and well-tuned parameterization schemes. All model components are carefully validated against the observations via the standalone mode, in which the observed anomalous SST (wind stress) forcing is prescribed to drive the atmospheric (oceanic) component. The superiority of RCZ’s model components over those in the original Cane-Zebiak model is evidenced by their better performance in simulating the observations. Coupled simulation with RCZ satisfactorily reproduces aspects of the observed ENSO characteristics, including the spatial pattern, phase-locking, amplitude asymmetry, and, particularly, ENSO diversity/bi-modality. RCZ serves as a promising tool for studying dynamics of ENSO diversity as it resolves most of the relevant processes proposed in the literature, including atmospheric nonlinear convective heating, oceanic nonlinear dynamical heating, and the ENSO/westerly wind burst interaction.

54 ENVIRONMENTAL SCIENCES↗

What can the GRACE seasonal cycle tell us about lake-aquifer interactions?

Lake-aquifer interactions have been the subject of investigation and debate for decades. Traditional investigation methods include measurement of water flux across the groundwater-surface water interface, application of heat and environmental tracer methods, conducting numerical simulations of the water flow, and mass balance-based approaches. We first review, evaluate and describe the different approaches that have been applied for examining lake-aquifer interactions and propose an additional complementary approach. While the leakage from lakes and its slow movement through porous media (laminar flow) is well characterized by existing methods, modeling the rapid and turbulent flow through preferred pathways (faults/karst) remains a challenging task. To better understand the nature, and the full scale, of the lake aquifer interactions, and using Lake Nasser and the underlying Dakhla subbasin of the Nubian Sandstone Aquifer System (NSAS) in the Western Desert of Egypt (area: 0.66 x 10 6 km 2 ) as a test site, we examine, model, and correlate temporally and spatially, the variations in Gravity Recovery and Climate Experiment terrestrial water storage (GRACE TWS ) solutions, with precipitation, lake levels, area, and water volume. We review current GRACE applications in hydrology and present our novel approach. Findings include: firstly, large seasonal fluctuations (peak: Nov./Dec.; trough: July/Aug.) in Lake Nasser's surface water levels (average annual fluctuations: from 3.7 m to 7.5 m), area (average area: 3622 km 2 but up to 4530 km 2 ), and volume (annual average: 13.4 km 3 , and up to 34 km 3 ) are observed throughout years 2006 to 2015. These fluctuations are accompanied by an increase in GRACE TWS (average: 50 ± 13 mm/yr, up to 77 ± 18 mm/yr) over Lake Nasser and by a progression of a front of increasing GRACE TWS values (> 50 ± 13 mm) away from the lake reaching distances of up to 700 km some 3 to 5 months following peak lake level periods. The areas witnessing the seasonal increase in GRACE TWS display a progressive increase in phase and decrease in amplitude with distance from the lake. Secondly, the negligible precipitation over the Dakhla subbasin cannot account for the observed seasonal GRACE TWS patterns and neither can the leakage signal from Lake Nasser. Thirdly, overall similarities in the distribution of GRACE TWS seasonal spatial patterns are observed. During high lake level periods (e.g., Dec. 2007; Feb. 2015) additional, and more distant, areas from Lake Nasser saw increases in GRACE TWS and vice versa during low lake level periods (e.g., July 2006; Aug. 2010). These observations are consistent with Lake Nasser being the main source of modern recharge for the Dakhla subbasin and suggest a new conceptual model for the subbasin: a slow groundwater flow through a porous matrix and a rapid groundwater flow along a network of faults, fractures, and karst topography across the matrix. We suggest that the proposed conceptual model for the interaction between Lake Nasser and the Dakhla subbasin could be applicable to aquifers of similar geologic, climatic, and hydrologic settings worldwide and that approaches similar to those advocated here could be used to investigate the validity of this suggestion.

54 ENVIRONMENTAL SCIENCES↗

Multispectral Quantitative Phase Imaging Using a Diffractive Optical Network

As a label‐free imaging technique, quantitative phase imaging (QPI) provides optical path length information of transparent specimens for various applications in biology, materials science, and engineering. Multispectral QPI measures quantitative phase information across multiple spectral bands, permitting the examination of wavelength‐specific phase and dispersion characteristics of samples. Herein, the design of a diffractive processor is presented that can all‐optically perform multispectral quantitative phase imaging of transparent phase‐only objects within a snapshot. The design utilizes spatially engineered diffractive layers, optimized through deep learning, to encode the phase profile of the input object at a predetermined set of wavelengths into spatial intensity variations at the output plane, allowing multispectral QPI using a monochrome focal plane array. Through numerical simulations, diffractive multispectral processors are demonstrated to simultaneously perform quantitative phase imaging at 9 and 16 target spectral bands in the visible spectrum. The generalization of these diffractive processor designs is validated through numerical tests on unseen objects, including thin Pap smear images. Due to its all‐optical processing capability using passive dielectric diffractive materials, this diffractive multispectral QPI processor offers a compact and power‐efficient solution for high‐throughput quantitative phase microscopy and spectroscopy.

36 MATERIALS SCIENCE↗

Modeling the impacts of wood pellet demand on forest dynamics in southeastern United States

Abstract The export of wood pellets from the southeastern United States (USA) has grown significantly in recent years, following rising demand from Europe. Increased wood pellet demand could lead to spatially variable changes in timberland management and area in the USA. This study presents an assessment of the impacts of increasing wood pellet demand (an additional 11.6 Mt by 2030) on land‐use dynamics, taking into account developments in other wood product markets as well as expected changes in other land uses. An economic model for the forest sector of the southeastern USA (SRTS) was linked to a land‐use change model (PLUC) to identify potential locations of land‐use change following scenarios of demand for pellets and other wood products. Projections show that in the absence of additional demand for wood pellets, natural timberland area is projected to decline by 450–15 000 km 2 by 2030, mainly through urbanization and pine plantation establishment. Under the high wood pellet demand scenario, more (2000–7500 km 2 ) natural timberland area is retained and more (8000–20 000 km 2 ) pine plantation is established. Shifts from natural timberland to pine plantation occur predominantly in the Atlantic coastal region. Future work will assess the impact of projected transitions in natural timberland and pine plantations on biodiversity and carbon storage. This modeling framework can be applied for multiple scenarios and land‐use projections to identify locations of timberland area changes for the whole southeastern USA, thereby informing the debate about potential impacts of wood pellet demand on land‐use dynamics and environmental services. © 2017 The Authors. Biofuels, Bioproducts and Biorefining published by Society of Chemical Industry and John Wiley & Sons, Ltd.

54 ENVIRONMENTAL SCIENCES↗

Structural Trends and Vibrational Analysis of N,N,N′,N′−Tetramethylmalonamide Complexes Across the Lanthanide Series

Fundamental understanding of coordination chemistry across the lanthanide series is essential for explaining chemical behavior of rare-earth metals in complex liquid-liquid extraction processes, which in turn affects the distribution ratios and efficacy of separations as a whole. In this work, we explore the structural trends between the lanthanides and a neutral N,N,N',N'-tetramethylmalonamide (TMMA) ligand within four isolated families of solid-state compounds: Ln(trans-TMMA) 2 (NO 3 ) 3 Ln=La-Nd, Sm; Ln(cis-TMMA) 2 (NO 3 ) 3 Ln=Eu-Tb, Er; [Ln(TMMA) 3 (NO 3 ) 2 ][Ln(TMMA)(NO 3 ) 4 ] Ln=Dy-Tm; Ln(Κ 2 -TMMA)(iPrOH)(NO 3 ) 3 and Ln(Κ 1 -TMMA)(Κ 2 -TMMA)(NO 3 ) 3 Ln=Yb, Lu. Moving across the lanthanide series, we note the formation of both discrete charge-neutral complexes, as well as charged molecular anion-cation pairs, with variations in spatial ligand arrangement, coordination numbers, and ligand denticities. IR and Raman spectroscopy paired with DFT frequency calculations were used for an in-depth investigation of vibrational modes unique to each structural family. The collection of isolated model compounds was also discussed in the context of liquid-liquid separations based on reported distribution ratios from malonamide extraction.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

An overlooked nitrogen loss linked to anaerobic ammonium oxidation in estuarine sediments in China

Despite its importance, anammox (anaerobic ammonium oxidation) in estuarine sediment systems remains poorly understood, particularly at the continental scale. This study aimed to understand the abundance, diversity, and activity of anammox bacteria and to determine the main factors influencing the anammox process in estuarine sediments in China. Materials and methods Estuarine sediments were collected from 18 estuaries spanning over 4000 km. Experiments using an (15)Ntracer, quantitative PCR, and clone library construction were used to determine the activity, abundance, and diversity of anammox bacteria. The impact of environmental factors on anammox processes was also determined. Results and discussion The abundance of the anammox-specific hydrazine synthase (hzsB) gene ranged from 1.8 x 105 +/- 3.4 x 104 to 3.6 x 108 +/- 7.5 x 107 copies g(-1) dw. Candidatus Scalindua, Brocadia, Kuenenia, Jettenia, and two novel unidentified clusters were detected, with Scalindua dominating the anammox population. Additionally, the abundances of Scalindua, Kuenenia, and Brocadia were found to be significantly correlated with latitude. The anammox rates ranged from 0.29 +/- 0.15 to 13.68 +/- 3.98 nmol N g(-1) dw h(-1) and contributed to 2.39-82.61% of total N-2 production. Pearson correlation analysis revealed that the anammox rate was positively correlated with total nitrogen, total carbon, and temperature, and was negatively correlated with dissolved oxygen (DO). The key factors influencing the hzsB gene abundance were ammonium concentration, salinity, and DO. Ammonium concentration, pH, temperature, and latitude were main variables shaping the anammox-associated bacterial community. Conclusions Our results suggested that anammox bacteria are ubiquitous in coastal estuaries in China and underline the importance of anammox resulting in N loss at a continental scale.

activity↗

Evaluating the effect of internal aperture variability on transport in kilometer scale discrete fracture networks

The apertures of natural fractures in fractured rock are highly heterogeneous. However, in-fracture aperture variability is often neglected in flow and transport modeling and individual fractures are assumed to have uniform aperture distribution. The relative importance of in-fracture variability in flow and transport modeling within kilometer18 scale field–scale fracture networks has been under a matter of debate for a long time because the flow in each single fracture is controlled not only by in-fracture variability but also by boundary conditions. Computational limitations have previously prohibited researchers from investigating the relative importance of in-fracture variability in flow and transport modeling within large-scale fracture networks. We address this question by incorporating internal heterogeneity of individual fractures into 23 flow simulations within kilometer scale three-dimensional fracture networks, where fracture intensity, P32 (ratio between total fracture area and domain volume) is between 0.027 and 0.031 [1/m]. A recently developed discrete fracture network (DFN) simulation capability, dfnWorks, is used to generate DFNs that include in-fracture aperture variability represented by a stationary log-normal stochastic field with various correlation lengths and variances. The Lagrangian transport parameters, non-reacting travel time and cumulative retention, are calculated along particles streamlines. It is observed that due to local flow channeling early particle travel times are more sensitive to in-fracture variability than the tails of travel time distributions, where no significant effect of the in-fracture transmissivity variations and spatial correlation length is observed.

54 ENVIRONMENTAL SCIENCES↗

Wave energy resource characterization employing joint distributions in frequency-direction-time domain

Joint and marginal distributions in the frequency, direction, and time domain are employed to demonstrate their value for wave energy resource characterization when full spectra are available. Insights gained through analysis of these distributions support wave energy converter concept design, operation and maintenance. Spatial trends in the wave energy resource and contributing wave energy systems along the continental shelf of the West Coast of the United States are investigated using the most recent two-dimensional wave spectra measurements at four buoys over an eleven year period (2008 to 2018). Resource hot spots and dominant resolved energy resource bands in the frequency-direction-time domain are delineated. Resource attributes, including frequency and directional spreading, and seasonal variability, are characterized using joint distributions and marginal distributions of wave power spectra. North Pacific westerly swells in the winter season, augmented by Aleutian low-pressure southwesterly swells, are the principal suppliers of the dominant resource and main drivers influencing resource attributes. In conclusion, the modification of these systems southward, especially the North Pacific westerly swells, explains the observed spatial resource trends. The dominant resource wave period shifts two seconds to higher wave periods, thirty degrees in the dominant direction band to a more northward orientation, and forward by one month.

16 TIDAL AND WAVE POWER↗

An analytical phytoplankton model and its application in the tidal freshwater James River

Here, this study constructs an analytical model to understand the phytoplankton dynamics in a one-dimensional system by integrating physical and biological processes. We present an analytical solution of phytoplankton distribution along the longitudinal direction of a tidal river. The solution has two components: water age and accumulative growth. The water age represents the overall effect of physical transport due to advection, while the accumulative growth represents the accumulation of phytoplankton biomass due to biological processes during the transport. In addition, an alternative solution with nonlinear reaction term is given to account for the feedback mechanism of nonlinear processes that affect phytoplankton growth rate. The nonlinear reaction term can be also used to approximate the effect of physical mixing on phytoplankton distribution. The analytical solutions can be further used to predict the temporal variation and spatial distribution of phytoplankton along the tidal river. They also serve as a mathematical tool to unite different field phytoplankton observations. We applied the model in the Tidal Freshwater Region (TFR) of James River under different dynamic conditions and the model results match well with the observations, which validates the theory on different time scales. Furthermore, an analysis is conducted for the Local Chlorophyll-a Maximum (LCM) in the TFR. It shows that the condition for LCM is biologically controlled, but its location is regulated by river flow and river geomorphology.

54 ENVIRONMENTAL SCIENCES↗