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At least 1,315 records · Page 73

Bedrock weathering rates, reactive nitrogen influxes and effluxes, and nitrous oxide emissions rates from the Pumphouse Hillslope, East River Watershed, Colorado

Atmospheric nitrous oxide contributes directly to global warming, yet models of the nitrogen cycle do not account for bedrock, the largest pool of terrestrial nitrogen, as a source of nitrous oxide. Although it is known that release rates of nitrogen from bedrock are large, there is an incomplete understanding of the connection between bedrock-hosted nitrogen and atmospheric nitrous oxide. Here, we quantify nitrogen fluxes and mass balances at a hillslope underlain by marine shale. We found that at this site bedrock weathering contributes 78% of the subsurface reactive nitrogen, while atmospheric sources (commonly regarded as the sole sources of reactive nitrogen in pristine environments) account for only the remaining 22%. About 56% of the total subsurface reactive nitrogen denitrifies, including 14% emitted as nitrous oxide. The remaining reactive nitrogen discharges in porewaters to a floodplain where additional denitrification likely occurs. We also found that the release of bedrock nitrogen occurs primarily within the zone of the seasonally fluctuating water table and suggest that the accumulation of nitrate in the vadoes zone, often attributed to fertilization and soil leaching, may also include contributions from weathered nitrogen-rich bedrock. Our hillslope study suggests that under oxygenated and moisture-rich conditions, weathering of deep, nitrogen-rich bedrock makes an important contribution to the nitrogen cycle. The data files are in Excel, which can be accessed using Microsoft Office, and consist of many data sets from the Pumphouse Hillslope PLM (Pumphouse Lower Montane) 1, 2, 3, and 4. They include soil to rock (0-10 meters) solid phase minerals and elements compositions; time- and depth-resolved pore-water chemistry and pore-gas compositions; time- and depth-resolved water table depths and water fluxes; subsurface weathering rates; nitrogen influxes and effluxes and mass balance. The attached paper is in a Word document, which can be accessed using Microsoft Office, and in pdf format.

54 ENVIRONMENTAL SCIENCES↗

16S and ITS Amplicon Sequencing Fastq files and metadata from PARCHED Panama Tropical Forest soils, 2019-2020,

Model projections predict tropical forests will experience longer periods of drought and more intense precipitation cycles under a changing climate. Such transitions have implications for structure-function relationships within microbial communities. We examine how chronic drying might reshape prokaryotic and fungal communities across four lowland forests in Panama with a wide variation in mean annual precipitation and soil fertility. Four sites were established across a 1000 mm span in mean annual precipitation (2335 to 3300 mm). We expected microbial communities at sites with lower MAP to be less sensitive to chronic drying than sites with higher MAP; while fungal communities to be more resistant to disturbance than prokaryotes. At each location, partial throughfall exclusion structures were established over 10 x 10 m plots to reduce direct precipitation input. Raw demultiplexed sequences (bacteria, archaea, fungal) from soil samples taken from PARCHED Panama Tropical Forest throughfall exclusion experiments. Files that contain 16S are sequences from prokaryotes, ITS indicates sequences from fungi. Compressed fastq files are contained in Field_PARCHED_ITS_fastq_2020.zip, Field_PARCHED_ITS_fastq_2019.zip, Field_PARCHED_16S_fastq_2020.zip, Field_PARCHED_16S_fastq_2019.zip.There are four sites across the isthmus of Panama, each with 4 control and 4 exclusion plots. Throughfall exclusion shelters were built to intercept 50% of throughfall precipitation that hits the soil. Samples were taken on May 2019 and Jan 2020 from 0-10 cm and 10-20 cm depth approximately 9 and 18 months after shelter installation. Metadata and sample IDs for fastq files for 2019 sampling are within Field_PARCHED_Metadata_2019_ITS.csv and Field_PARCHED_Metadata_2019_16S.csv. The metadata for both 16S and ITS fastq files for January 2020 is included in Field_PARCHED_Metadata_2020.csv. No data processing or QA/QC was done on the raw data. Data processing example provided in R notebook file.

54 ENVIRONMENTAL SCIENCES↗

Radiocarbon of deep fine roots across four in lowland seasonal tropical forests in Panama

Objectives:Fine roots are key to ecosystem-scale nutrient, carbon (C), and water cycling, but our understanding of fine root traits variation within and among tropical forests, one of Earth’s most C-rich ecosystems, is limited. In 2022 and 2023, we aimed to explore differences in deep root characteristics among four lowland tropical forests in Panama, which vary in fertility and mean annual precipitation. We measured radiocarbon content (fraction modern [FM] and Δ14C) and δ13C of live fine roots at depths greater than 80 cm, up to 120 cm. The goal was to understand how deep root characteristics differ across these sites.Datasets included:The datasets provided include .csv and .xlsx files for radiocarbon content (fraction modern [FM] and Δ14C) and δ13C of live fine roots at depths greater than 80 cm, up to 120 cm collected from late 2017 to 2018 across four different forests. Additionally, a .kml file is provided with coordinates for all 32 plots included in the study across four forests (n = 8 plots per site). This dataset serves as baseline data before a throughfall exclusion experiment, Panama Rainforest Changes with Experimental Drying (PARCHED), was implemented. No special software is needed to open these files.

54 ENVIRONMENTAL SCIENCES↗

Reproductive and leaf litterfall fluxes in forest ecosystem sites globally (1950-2022)

Forest allocation of net primary productivity (NPP) to reproduction is poorly quantified globally, despite its critical role in forest regeneration and a well-supported trade-off with allocation to growth. Although field measurements of total NPP are rare, our work finds that a proxy for reproductive carbon allocation constructed from leaf (L) and reproductive (R) litterfall fluxes, R/(R+L), is strongly correlated with R/NPP, facilitating analysis across a wide range of sites where biometric estimates of NPP are not available (R² = 0.85; Hanbury-Brown et al., 2022, Ward et al., in prep). To investigate relationships between ecosystem-scale reproductive allocation (RA) and climate, soil fertility, and stand age gradients, we conducted a literature search and synthesized 824 observations of annual average leaf and reproductive litterfall fluxes across forest sites globally. The zip file includes 1) a folder Data/ containing the litterfall data ("GlobalForestRA_data.csv") and metadata ("GlobalForestRA_metadata.doc") files. The data file includes geographic coordinates, long-term mean annual temperature and precipitation (1970-2000, extracted from WorldClim2.1), leaf and reproductive litterfall fluxes, sampling interval and protocols, forest characteristics (dominant leaf morphology, information pertaining to forest age and successional stage, and disturbance history) and soil properties (% sand, %silt, %clay, total phosphorus (P), nitrogen (N), cation exchange capacity (CEC) and pH) extracted from SoilGrids250 and from on-site measurements, where available. The metadata file contains information about each variable reported in the data file, including data sources, processing methods, and all references. The Data folder contains two additional files used to create Figure 1; these are described in greater detail in the README.2) R scripts GloalForestRA_analysis.r and GlobalForestRA_SI.r and a folder /Functions used to produce results, figures, and tables in the manuscript Ward et al. (in press)3) a README file describing how the data and R scripts can be used to reproduce statistical results, figures, and tables found in the manuscript. Ward et al. (in press)This repository can also be found at: https://github.com/r-ward/Global_Analysis_ForestRA.Ward, R.E., Zhang-Zheng, H. Aernethy, K., Adu-Bredu, S., Arroyo, L., Bailey, A. et al. (in press). Forest age rivals climate to explain reproductive allocation patterns in forest ecosystems globally. Ecology Letters. Hanbury-Brown, A.R., Ward, R.E. & Kueppers, L.M. (2022). Forest regeneration within Earth system models: current process representations and ways forward. New Phytol., 235, 20–40.Ward et al. (2025), Forest age rivals climate to explain reproductive allocation patterns in forest ecosystems globally, in prep.

54 ENVIRONMENTAL SCIENCES↗

Microbial community data from throughfall exclusion experiment: Metadata, SI, community composition, LefSe, and FunGuilR data tables from PARCHED Panama tropical forest soils, 2024-2025

Soil contains more carbon (C) than terrestrial vegetation and the atmosphere combined, with some of the largest terrestrial C stocks in tropical rainforests. Soil microbes decompose organic matter, playing a vital role in the storage or loss of soil C. With climate change, drought conditions are predicted to increase in many tropical regions, including both chronic drying and extended drought, potentially influencing these processes. This project explored the effects of chronic and seasonal drying on soil microbial communities across four distinct tropical forests in a long-term drying experiment. We investigated the effects of a chronic drying manipulation on soil microbial community abundance and variation across different forests and seasons. We also compared findings with previously published data from these forests after short-term drying. This project used soils from a long-term drying experiment established in 2018 across four seasonal lowland forests in Panama. Soils were collected from 0 – 10 cm depths during three seasonal periods in control and drying plots in 2024 and 2025 from a total of 32 plots (n = 4 per forest per treatment). The forests varied in baseline rainfall and soil fertility. We calculated alpha and beta diversity indices and compared taxonomic community composition. We found significant biogeographic variation in microbial diversity and taxonomy, with significant differences across the forests and significant effects of the drying treatment. Metadata and sample IDs are within Metadata_16S.csv and Metadata_ITS.csv. Relative abundance tables of every sample at every season are shown in the Excel workbooks 16S Relative Abundance.xlsx and ITS Relative Abundance.xlsx. They are then also shown in CSV files by each taxonomic level. Linear discriminant analysis effect size (LefSe) tables are shown for the full 16S and ITS datasets (n = 96), subsets for every site at every season (n = 8), and then for the forests with each plot merged by season (n = 8). FunGuildR data table of ITS data is uploaded.

Bacteria↗

Root-soil depth profile in Luquillo Experimental Forest, Puerto Rico, February, 2019

With an objective of associating the distribution of roots in the soil profile with functional attributes related to phosphorus nutrition, 1-m cores were collected from sites in the Luquillo Experimental Forest, Puerto Rico, in February, 2019. The sampled sites were ridge and valley locations at El Verde and Icacos with soils that differ in parent material and phosphorus fertility. Depth profiles of soil physical characteristics (bulk density, moisture content, and particle size distribution), phosphorus content (total phosphorus, organic phosphorus, and resin or available phosphorus), soil and root-associated phosphatase activity, and fine-root traits (biomass, specific root length and area, and phosphorus content) were determined.

54 ENVIRONMENTAL SCIENCES↗

Tropical root traits in response to global changes from 1984 to 2023

This dataset is a compilation of tropical root traits data in response to different global changes in tropical sites, considering 23.50N and S as latitudinal boundaries. The global changes considered are warming, drought, flooding, cyclones, nitrogen addition, CO2 fertilization, and fire. This dataset contains 266 root trait observations from 93 studies across 24 tropical countries. The full citation from where the data was taken from is provided in the dataset, as well as the global change, the ecosystem type, location, coordinates, the root traits measured, and the direction of their response after the global change. Additional information such as the duration of the experiment, the intensity of the global change, the soil layers from where the roots were collected, the root orders, and the type of experiment are also shown. We obtained this dataset by performing a systematic literature review on Web of Science using standardized keywords in English, Spanish, and Portuguese (Yaffar, Lugli et al. in press).

54 ENVIRONMENTAL SCIENCES↗

Metals in Past Societies: A Global Perspective on Indigenous African Metallurgy Shadreck Chirikure

This slim book (166 pages) shines a spotlight on pre-industrial African metallurgy, its global connections, and anthropological implications. It integrates seemingly disparate disciplines, such as history, geology, ethnography, archeology, and metallurgy, to illustrate the diversity and innovation in metallurgy across Africa and the role of metals in the rise of socio-economic inequalities and political power. The book has 7 chapters and the focus on metals as enablers of human needs and wants is evident in each chapter. The first chapter presents the context of the work and data sources. The second chapter focuses on the origin and development of mining and metallurgy in pre-industrial Africa. Chapter 3 is dedicated to the interaction of nature and culture in the process of mining. Chapter 4 deals with the transformation of the ore into metal by smelting and the sociocultural aspects of this process. Chapter 5 explores the social and cultural roles acquired by metals as a result of fabrication into objects. Chapter 6 examines the social role of metals, trade in metals, cultural contact, proto-globalization, and technology transfer. Finally, Chapter 7 draws lessons for global anthropology from the African experience. The sources of information are adequately cited and the long list of references at the end of each chapter will be a boon to researchers in this field. The author highlights the cultural aspects and social context of the adoption of metallurgy in Africa while drawing parallels between practices in pre-industrial Africa and those in other parts of the world. The book is peppered with delightful vignettes that offer insights into the process of transforming nature into culturally significant objects. For instance, African miners, like their counterparts in Nepal and Latin America, called upon deities, spirits and ancestors to mediate between nature and humans. Women had distinct roles in this process, but there were variations in these roles and in the caste status of metal workers across Africa. Taboos, rituals and magic were very much a part of the development of metallurgical technology. The smelting of metal was considered analogous to conception, gestation, and child birth. Power, fertility and metallurgy were intertwined as shown by the decoration of furnaces with female anatomical features. The book concludes with a warning against broad generalizations and stereotypes about African practices. This volume is well written and illustrated with photos, micrographs, colorful maps and illustrations that make it eminently readable.

36 MATERIALS SCIENCE↗

AmeriFlux US-Ne2 Mead - irrigated maize-soybean rotation site

This is the AmeriFlux version of the carbon flux data for the site US-Ne2 Mead - irrigated maize-soybean rotation site. Site Description - The study site is one of three fields (all located within 1.6 km of each other) at the University of Nebraska Eastern Nebraska Research, Extension and Education Center near Mead, Nebraska. This site is irrigated with a center pivot system. Prior to the initiation of the study, the irrigated site had a 10-yr history of maize-soybean rotation under no-till management. A tillage operation (disking) was done just prior to the 2001 planting to homogenize the top 0.1 m of soil, incorporate P and K fertilizers, as well as previously accumulated surface residues. Since this tillage operation, the site has been under no-till management in a maize-soybean rotation (maize odd years and soybean even years). There was a brief period due to an intercomparison study from 2010 to 2013 when fall conservation tillage was performed and maize (not soybean) was planted in 2010 and 2012. The management reverted to a strictly no-till maize-soybean crop rotation after 2014.

Suyker, Andy↗

AmeriFlux US-Ne3 Mead - rainfed maize-soybean rotation site

This is the AmeriFlux version of the carbon flux data for the site US-Ne3 Mead - rainfed maize-soybean rotation site. Site Description - The study site is one of three fields (all located within 1.6 km of each other) at the University of Nebraska Agricultural Research and Development Center near Mead, Nebraska. While the other two sites are equipped with irrigation systems, this site relies on rainfall. A tillage operation (disking) was done just prior to the 2001 planting to homogenize the top 0.1 m of soil, incorporate P and K fertilizers, as well as previously accumulated surface residues. Since initiation of the study in 2001, this site has been under a strictly no-till, maize-soybean rotation (maize odd years and soybean even years).

Suyker, Andy↗

AmeriFlux US-AR2 ARM USDA UNL OSU Woodward Switchgrass 2

This is the AmeriFlux version of the carbon flux data for the site US-AR2 ARM USDA UNL OSU Woodward Switchgrass 2. Site Description - The ARM USDA UNL OSU Woodward Switchgrass 2 tower is located on public land owned by the USDA-ARS Southern Plains Range Research Station in Woodward, Oklahoma. The site is on a former wheat field that is in the process of changing to switchgrass. A companion site (ARM USDA UNL OSU Woodward Switchgrass 1) is on a former native prairie. Previous wheat was planted in Fall 2008. In Spring 2009, herbicide was applied to kill the wheat prior to switchgrass planting. Later in the year, the site was sprayed with post-emergence herbicide. In 2010, fertilization occurred before herbicide was sprayed for broadleaf control.

Billesbach, Dave↗

AmeriFlux US-Twt Twitchell Island

This is the AmeriFlux version of the carbon flux data for the site US-Twt Twitchell Island. Site Description - The Twitchell Island site is a rice paddy that is owned by the state and managed by the California Department of Water Resources. While Bare Peat field was leveled for rice planting, the tower was installed on April 3, 2009. The rice paddy was converted from corn in 2007. In Summer 2009, Bispyribac-sodium and Pendimethalin herbicides were applied to the fields prior to rice planting and flooding, then pesticide and fertilizer application took place. Each year after rice is planted in the spring by drilling, the field is flooded. Then, the field is drained in early fall, rice is harvested, and the field site is moved.

Knox, Sara↗

AmeriFlux US-KUT KUOM Turfgrass Field

This is the AmeriFlux version of the carbon flux data for the site US-KUT KUOM Turfgrass Field. Site Description - The site was a low-maintenace lawn consisting of cool-season turfgrasses, typical of residential lawns or urban parks in the study area. It was mowed to a height of 70 mm approximately once per week with clippings left to decompose on the surface, was not irrigated, and received one application of inorganic N fertilizer per year. The surrounding suburban residential neighborhood experienced rapid residential development in the 1950s; prior to that time, farms and nurseries were the predominant land-use types. Note that the land management of the field site changed (removal of the turfgrass lawn and planting of trees) AFTER the flux study was completed--this means that imagery after 2009 does not show the land conditions during the flux study.

McFadden, Joe↗

AmeriFlux CA-ER1 Elora Research Station

This is the AmeriFlux version of the carbon flux data for the site CA-ER1 Elora Research Station. Site Description - This is an agricultural site that typically grows corn. It is part of a larger research project on N2O fluxes from different fertilizer treatments. The site is relatively flat and homogenous. The site has been managed as agricultural land since the 1960’s and records exist of the previously-grown crops.

Wagner-Riddle, Claudia↗

AmeriFlux FLUXNET-1F CA-ER1 Elora Research Station

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site CA-ER1 Elora Research Station. This is the FLUXNET version of the carbon flux data for the site CA-ER1 Elora Research Station produced by applying the standard ONEFlux (1F) software. Site Description - This is an agricultural site that typically grows corn. It is part of a larger research project on N2O fluxes from different fertilizer treatments. The site is relatively flat and homogenous. The site has been managed as agricultural land since the 1960’s and records exist of the previously-grown crops.

Wagner-Riddle, Claudia↗

AmeriFlux FLUXNET-1F US-AR2 ARM USDA UNL OSU Woodward Switchgrass 2

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-AR2 ARM USDA UNL OSU Woodward Switchgrass 2. This is the FLUXNET version of the carbon flux data for the site US-AR2 ARM USDA UNL OSU Woodward Switchgrass 2 produced by applying the standard ONEFlux (1F) software. Site Description - The ARM USDA UNL OSU Woodward Switchgrass 2 tower is located on public land owned by the USDA-ARS Southern Plains Range Research Station in Woodward, Oklahoma. The site is on a former wheat field that is in the process of changing to switchgrass. A companion site (ARM USDA UNL OSU Woodward Switchgrass 1) is on a former native prairie. Previous wheat was planted in Fall 2008. In Spring 2009, herbicide was applied to kill the wheat prior to switchgrass planting. Later in the year, the site was sprayed with post-emergence herbicide. In 2010, fertilization occurred before herbicide was sprayed for broadleaf control.

Billesbach, Dave↗

AmeriFlux US-YNS North Star Yedoma

This is the AmeriFlux version of the carbon flux data for the site US-YNS North Star Yedoma. Site Description - Dry hillslope underlain by ice rich permafrost and now covered with native grasses and managed as a rustic golf course. The land clearing performed decades ago has caused permafrost thawing, surface subsidence, and development of thermokarst mounds or baidjarahks. No foreign fill materials, pesticides or fertilizers have been used, and the area is not irrigated. The area outside the flux footprint is second growth deciduous forest with similar soil conditions.

Anthony, Katey Walter [University of Alaska Fairba↗

AmeriFlux FLUXNET-1F US-Twt Twitchell Island

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-Twt Twitchell Island. This is the FLUXNET version of the carbon flux data for the site US-Twt Twitchell Island produced by applying the standard ONEFlux (1F) software. Site Description - The Twitchell Island site is a rice paddy that is owned by the state and managed by the California Department of Water Resources. While Bare Peat field was leveled for rice planting, the tower was installed on April 3, 2009. The rice paddy was converted from corn in 2007. In Summer 2009, Bispyribac-sodium and Pendimethalin herbicides were applied to the fields prior to rice planting and flooding, then pesticide and fertilizer application took place. Each year after rice is planted in the spring by drilling, the field is flooded. Then, the field is drained in early fall, rice is harvested, and the field site is moved.

Knox, Sara [University of California, Berkeley]↗