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At least 1,333 records · Page 74

Time-dependent study of anisotropy in Rayleigh-Taylor instability induced turbulent flows with a variety of density ratios

This study focuses on understanding the time-dependent anisotropy, mixing, scaling of flows induced by Rayleigh-Taylor instability, and complementing the late-time snapshots reported by Cabot and Zhou [“Statistical measurements of scaling and anisotropy of turbulent flows induced by Rayleigh-Taylor instability,” Phys. Fluids 25, 015107 (2013)]. In particular, we utilize three large datasets with different Atwood numbers (density ratios) from well resolved direct numerical simulations at a moderate Reynolds number with the goal of determining the degree of departure of this inhomogeneous flow from that of homogeneous, isotropic turbulence. Three key time-dependent statistical measurements are considered in detail to delineate the role played by the acceleration. First, a number of directional length scales in this anisotropic turbulence are inspected. Second, the relationship among the outer-scale, the turbulence length, and the Taylor-microscale based Reynolds numbers is also clarified. Lastly, the normalized dissipation rate is employed to inspect the distinctive features of the flow in the inhomogeneous direction parallel to gravity and in the homogeneous perpendicular directions.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Ptychographic phase retrieval by proximal algorithms

We derive a set of ptychography phase-retrieval iterative engines based on proximal algorithms originally developed in convex optimization theory, and discuss their connections with existing ones. The use of proximal operator creates a simple frame work that allows us to incorporate the effect of noise from a maximum-likelihood (ML) principle. We focus on three particular algorithms, namely proximal minimization, alternating direction method of multiplier and accelerated proximal gradient (APG). We benchmark their performance with numerical simulations, and discuss their optimal conditions for convergence and accuracy. An experimental dataset is used to demonstrate their effectiveness as well, in which case an array of cubic Au nanoparticles with a size of 50 nm is imaged. We show that with the presence of Poisson noise, a dataset with photon counts up to 10 4 at one detector pixel already requires ML-based methods to achieve a stable convergence. Among the three algorithms derived in this work, APG method is reported first time for its application in ptychographic reconstruction and shows superior performance in terms of both accuracy and convergence rate with a noisy dataset.

36 MATERIALS SCIENCE↗

The Origins of the ParaView and VisIt Scientific Visualization Tools

ParaView and VisIt play a key role in the visual understanding of scientific simulation data. These tools are open source, designed to handle extremely large datasets, and can run on supercomputers and large-scale display walls. They are in daily use by scientists, practitioners, and students at supercomputing centers, in industry, and at universities. In conclusion, this article gives personal accounts of the origins of these visualization tools.

Ahrens, James [Los Alamos National Laboratory (LAN↗

Medium- and Heavy-Duty Truck Duty Cycles

This dataset provides second-by-second duty cycle data for Class 6 and Class 8 diesel trucks in Texas, including key vehicle metrics, engine-related data, and GPS data (excluding GPS latitude and longitude to ensure confidentiality). The data were collected via tablets installed on the trucks and organized into daily datasets, each associated with a unique vehicle ID and date. There are 12 daily datasets for Class 6 diesel trucks (three unique vehicle IDs) and 43 daily datasets for Class 8 diesel trucks (six unique vehicle IDs). The units associated with each column are included in the name. The engine performance data include columns such as engine speed, engine percent torque, and engine fuel rate. Road grade (%/100) was estimated using the GPS altitude and wheel-based vehicle speed, which is used as an input for FASTSim. Cumulative distance was also calculated using the wheel-based vehicle speed. Additional columns include: - Engine Speed (RPM): Removed inaccurate readings and used to calculate angular velocity (radians/second). - Torque (N·m): Calculated using engine percent torque, nominal friction percent torque, and engine reference torque values (those columns were removed from dataset), then normalized to express as torque (%). - Flywheel Power (%): Calculated using the angular velocity and torque (in kW), then normalized as a percentage of the maximum value. - Engine Fuel Rate (%) and Torque (%): Both metrics were normalized by dividing by their respective maximum values within each dataset to express them as percentages. The datasets were analyzed to assess the energy impact of various driving behaviors, simulate energy efficiency, and recommend optimal routes for diesel trucks using NLR’s tool called RouteE. For driver coaching, factors like speed and acceleration limits were considered, and idle periods were reduced (assuming the engine was off during idling) to adjust each drive cycle. These adjusted drive cycles were then simulated in FASTSim to evaluate their effect on fleet energy consumption and estimate potential energy savings. The original cycles are available for download on this page ![image](CoVaR_Image_for_Data_Page_Kenworth_Truck.jpg)

1Hz↗

Cyber Physical Subsystems under Adverse Conditions

The United States power grid is built upon complex cyber-physical systems (CPS), including many distributed energy resources (DERs) and microgrid structures. Due to cross-disciplinary domains that govern the interplay between cyber and physical technologies that sustain DERs, it is difficult to confidently predict how these systems will react under adverse conditions such as faults and cyberattacks. This project utilized power hardware in the loop (PHiL) to gain system behavior knowledge and robust understanding through experimentation and observational science. It also produced a large volume of datasets to feed into other efforts to advance high-fidelity model simulations and to support the design of novel control approaches.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Uncertainty in Atlantic Multidecadal Oscillation derived from different observed datasets and their possible causes

As a leading mode of sea surface temperature (SST) variability over the North Atlantic in both observations and model simulations, the Atlantic Multidecadal Oscillation (AMO) can have a substantial influence on regional and global climate. By using Low-Frequency Component Analysis, we explore the uncertainties of the resulting AMO indices and the corresponding spatial patterns derived from three observational SST datasets. We found that the known coherent spatial pattern of the AMO at the basin scale over the North Atlantic appears in two out of the three datasets. Further analysis indicates that both the warming trend and the different techniques used to construct these observed gridded SSTs contribute to the AMO’s spatial coherence over the North Atlantic, especially during periods of sparse data sampling. The SST in the Extended Reconstructed SST dataset version 5 (ERSSTv5), changes from being systematically below the other datasets during the dense sampling periods on either side of the Second World War (WWII), to systematically above the other datasets during WWII, thereby introducing an artificial 10–20-year variability that affects the AMO’s spatial coherence. This coherence in the AMO’s spatial pattern is also affected by bias adjustment in ERSSTv5 at relative cool (i.e., non-summer) seasons, and by the heterogeneous North Atlantic warming pattern. The different AMO patterns can induce the different effects of wind, surface heat fluxes, and then drive ocean circulation and its heat transport convergence, especially for some seasons. For AMO indices, both the different detrending methods and different observational data result in uncertainty for the period 1935–1950. Such SST uncertainty is important to detect the relative role of the atmosphere and ocean in shaping the AMO.

54 ENVIRONMENTAL SCIENCES↗

Microtopographic control on the ground thermal regime in ice wedge polygons

The goal of this research is to constrain the influence of ice wedge polygon microtopography on near-surface ground temperatures. Ice wedge polygon microtopography is prone to rapid deformation in a changing climate, and cracking in the ice wedge depends on thermal conditions at the top of the permafrost; therefore, feedbacks between microtopography and ground temperature can shed light on the potential for future ice wedge cracking in the Arctic. We first report on a year of sub-daily ground temperature observations at 5 depths and 9 locations throughout a cluster of low-centered polygons near Prudhoe Bay, Alaska, and demonstrate that the rims become the coldest zone of the polygon during winter, due to thinner snowpack. We then calibrate a polygon-scale numerical model of coupled thermal and hydrologic processes against this dataset, achieving an RMSE of less than 1.1 °C between observed and simulated ground temperature. Finally, we conduct a sensitivity analysis of the model by systematically manipulating the height of the rims and the depth of the troughs and tracking the effects on ice wedge temperature. The results indicate that winter temperatures in the ice wedge are sensitive to both rim height and trough depth, but more sensitive to rim height. Rims act as preferential outlets of subsurface heat; increasing rim size decreases winter temperatures in the ice wedge. Deeper troughs lead to increased snow entrapment, promoting insulation of the ice wedge. The potential for ice wedge cracking is therefore reduced if rims are destroyed or if troughs subside, due to warmer conditions in the ice wedge. These findings can help explain the origins of secondary ice wedges in modern and ancient polygons. The findings also imply that the potential for re-establishing rims in modern thermokarst-affected terrain will be limited by reduced cracking activity in the ice wedges, even if regional air temperatures stabilize.

58 GEOSCIENCES↗

Improved Mars Upper Atmosphere Climatology

The detailed characterization of the Mars upper atmosphere is important for future Mars aerobraking activities. Solar cycle, seasonal, and dust trends (climate) as well as planetary wave activity (weather) are crucial to quantify in order to improve our ability to reasonably depict the state of the Mars upper atmosphere over time. To date, our best information is found in the Mars Global Surveyor (MGS) Accelerometer (ACC) database collected during Phase 1 (Ls = 184 - 300; F10.7 = 70 - 90) and Phase 2 (Ls = 30 - 90; F10.7 = 90 - 150) of aerobraking. This database (100 - 170 km) consists of thermospheric densities, temperatures, and scale heights, providing our best constraints for exercising the coupled Mars General Circulation Model (MGCM) and the Mars Thermospheric General Circulation Model (MTGCM). The Planetary Data System (PDS) contains level 0 and 2 MGS Accelerometer data, corresponding to atmospheric densities along the orbit track. Level 3 products (densities, temperatures, and scale heights at constant altitudes) are also available in the PDS. These datasets provide the primary model constraints for the new MGCM-MTGCM simulations summarized in this report. Our strategy for improving the characterization of the Mars upper atmospheres using these models has been three-fold : (a) to conduct data-model comparisons using the latest MGS data covering limited climatic and weather conditions at Mars, (b) to upgrade the 15-micron cooling and near-IR heating rates in the MGCM and MTGCM codes for ad- dressing climatic variations (solar cycle and seasonal) important in linking the lower and upper atmospheres (including migrating tides), and (c) to exercise the detailed coupled MGCM and MTGCM codes to capture and diagnose the planetary wave (migrating plus non-migrating tidal) features throughout the Mars year. Products from this new suite of MGCM-MTGCM coupled simulations are being used to improve our predictions of the structure of the Mars upper atmosphere for the upcoming MRO aerobraking exercises in 2006. A Michigan website, containing MTGCM output fields from previous climate simulations, is being expanded to include new MGCM-MTGCM simulations addressing planetary wave influences upon thermospheric aerobraking fields (densities and temperatures). In addition, similar MTGCM output fields have been supplied to the MSFC MARSGRAM - 200X empirical model, which will be used in mission operations for conducting aerobraking maneuvers.

Bougher, S. W.↗

Large-Scale Simulations and Detailed Flow Field Measurements for Turbomachinery Aeroacoustics

The presentation is a review of recent work in highly loaded compressors, turbine aeroacoustics and cooling fan noise. The specific topics are: the importance of correct numerical modeling to capture blade row interactions in the Ultra Efficient Engine Technology Proof-of-Concept Compressor, the attenuation of a detonation pressure wave by an aircraft axial turbine stage, current work on noise sources and acoustic attenuation in turbines, and technology development work on cooling fans for spaceflight applications. The topic areas were related to each other by certain themes such as the advantage of an experimentalist s viewpoint when analyzing numerical simulations and the need to improve analysis methods for very large numerical datasets.

VanZante, Dale↗

Science Driven By Space Biology Omics Data Utilizing NASA's GeneLab Platform

Determining the biological impact of spaceflight through novel approaches is essential to reduce the health risks to astronauts for long-term space missions. The current established health risks due to spaceflight are only reflecting known symptomatic and physiologic responses and do not reflect early onset of other potential diseases. There are many unknown variables which still need to be identified to fully understand the health impacts due to the environmental factors in space. One method to uncover potential novel biological mechanisms responsible for health risks in astronauts is by utilizing NASA's GeneLab Data Systems (genelab.nasa.gov). GeneLab is public repository that hosts multiple omics datasets generated from space biology experiments that include experiments flown in space, simulated cosmic radiation.

Beheshti, Afshin↗

AbacusSummit Cleaned Halo Catalogs

This is a data release from the AbacusSummit suite of cosmological N-body simulations. It contains dark matter halo catalogs and particle samples from those halos. The halo catalogs have been augmented (cleaned) using halo merger tree information. Descriptions of AbacusSummit, the cleaned halo catalogs, and instructions for manipulating these catalogs can be found at the following URL: abacussummit.readthedocs.io/ The halo catalog cleaning is structured as a set of auxiliary files that are ingested by the reader code at runtime. But this release contains both the original catalogs and the auxiliary files, thus forming a self-contained dataset. The files in this release are aggregated by redshift. We define sets of simulations (like all c000 sims or all hugebase sims), and then store one redshift from all simulations per tarball. This is designed to support the use-case where a user wants to analyze multiple simulations at a certain redshift.

79 ASTRONOMY AND ASTROPHYSICS↗

The E3SM Diagnostics Package (E3SM Diags v2.7): a Python-based diagnostics package for Earth system model evaluation

Abstract. The E3SM Diagnostics Package (E3SM Diags) is a modern, Python-based Earth system model (ESM) evaluation tool (with Python module name e3sm_diags), developed to support the Department of Energy (DOE) Energy Exascale Earth System Model (E3SM). E3SM Diags provides a wide suite of tools for evaluating native E3SM output, as well as ESM data on regular latitude–longitude grids, including output from Coupled Model Intercomparison Project (CMIP) class models. E3SM Diags is modeled after the National Center for Atmospheric Research (NCAR) Atmosphere Model Working Group (AMWG, 2022) diagnostics package. In its version 1 release, E3SM Diags included a set of core essential diagnostics to evaluate the mean physical climate from model simulations. As of version 2.7, more process-oriented and phenomenon-based evaluation diagnostics have been implemented, such as analysis of the quasi-biennial oscillation (QBO), the El Niño–Southern Oscillation (ENSO), streamflow, the diurnal cycle of precipitation, tropical cyclones, ozone and aerosol properties. An in situ dataset from DOE's Atmospheric Radiation Measurement (ARM) program has been integrated into the package for evaluating the representation of simulated cloud and precipitation processes. This tool is designed with enough flexibility to allow for the addition of new observational datasets and new diagnostic algorithms. Additional features include customizable figures; streamlined installation, configuration and execution; and multiprocessing for fast computation. The package uses an up-to-date observational data repository maintained by its developers, where recent datasets are added to the repository as they become available. Finally, several applications for the E3SM Diags module were introduced to fit a diverse set of use cases from the scientific community.

54 ENVIRONMENTAL SCIENCES↗

Predicting variation in subject thermal response during transcranial magnetic resonance guided focused ultrasound surgery: Comparison in seventeen subject datasets

Purpose: In transcranial magnetic resonance-guided focused ultrasound (tcMRgFUS) treatments, the acoustic and spatial heterogeneity of the skull cause reflection, absorption, and scattering of the acoustic beams. These effects depend on skull-specific parameters and can lead to patient-specific thermal responses to the same transducer power. In this work, the authors develop a simulation tool to help predict these different experimental responses using 3D heterogeneous tissue models based on the subject CT images. The authors then validate and compare the predicted skull efficiencies to an experimental metric based on the subject thermal responses during tcMRgFUS treatments in a dataset of seventeen human subjects. Methods: Seventeen human head CT scans were used to create tissue acoustic models, simulating the effects of reflection, absorption, and scattering of the acoustic beam as it propagates through a heterogeneous skull. The hybrid angular spectrum technique was used to model the acoustic beam propagation of the InSightec ExAblate 4000 head transducer for each subject, yielding maps of the specific absorption rate (SAR). The simulation assumed the transducer was geometrically focused to the thalamus of each subject, and the focal SAR at the target was used as a measure of the simulated skull efficiency. Experimental skull efficiency for each subject was calculated using the thermal temperature maps from the tcMRgFUS treatments. Axial temperature images (with no artifacts) were reconstructed with a single baseline, corrected using a referenceless algorithm. The experimental skull efficiency was calculated by dividing the reconstructed temperature rise 8.8 s after sonication by the applied acoustic power. Results: The simulated skull efficiency using individual-specific heterogeneous models predicts well (R{sup 2} = 0.84) the experimental energy efficiency. Conclusions: This paper presents a simulation model to predict the variation in thermal responses measured in clinical ctMRGFYS treatments while being computationally feasible.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Numerical Simulations of A Conceptual MSR-EES Shoulder Recession

The present study demonstrates our in-house material response solver, Icarus's capability to simulate the ablative conditions, including pyrolysis effects due to the interaction between hypersonic boundary layers and the thermal protection system (TPS). A conceptual aeroshell shoulder design, which undergoes mission-relevant flow and material conditions, is selected for the demonstration purpose. LAURA, a structured flow solver, is used to solve flow around the shoulder at several trajectory points of a flight path. The aerothermal dataset obtained from LAURA is used to enforce boundary conditions on the aeroshell wall to simulate ablation processes. The two-layered material system is stacked with HEEET (TPS) and Aluminum (actual material). A set of base parameters, such as the angle of material orientation with respect to the flow direction, convective heat-transfer co-efficient, and aerothermal boundary conditions on the rear end of the HEEET material layer, is selected to conduct a base-case simulation. A small amount of recession was observed, indicating that the design should be fine to go through the selected flow and material conditions. Furthermore, the parameters mentioned above are individually altered and are observed to affect the shoulder design's recession compared to the base case. Verification of our Icarus setup was also carried out using a one-dimensional grid and FIAT, a one-dimensional material-response solver, to build credibility for our results. As the current work is an uncoupled fluid-material-response simulation, a local sharp mesh deformation in the recessed surface near the shoulder corner is observed.

Prakash Shrestha↗

Analysis-Specific Fast Simulation at the LHC with Deep Learning

Abstract We present a fast-simulation application based on a deep neural network, designed to create large analysis-specific datasets. Taking as an example the generation of W + jet events produced in $$\sqrt{s}=$$ s = 13 TeV proton–proton collisions, we train a neural network to model detector resolution effects as a transfer function acting on an analysis-specific set of relevant features, computed at generation level, i.e., in absence of detector effects. Based on this model, we propose a novel fast-simulation workflow that starts from a large amount of generator-level events to deliver large analysis-specific samples. The adoption of this approach would result in about an order-of-magnitude reduction in computing and storage requirements for the collision simulation workflow. This strategy could help the high energy physics community to face the computing challenges of the future High-Luminosity LHC.

Chen, C.↗

Using a surrogate-assisted Bayesian framework to calibrate the runoff-generation scheme in the Energy Exascale Earth System Model (E3SM) v1

Abstract. Runoff is a critical component of the terrestrial water cycle, and Earth system models (ESMs) are essential tools to study its spatiotemporal variability. Runoff schemes in ESMs typically include many parameters so that model calibration is necessary to improve the accuracy of simulated runoff. However, runoff calibration at a global scale is challenging because of the high computational cost and the lack of reliable observational datasets. In this study, we calibrated 11 runoff relevant parameters in the Energy Exascale Earth System Model (E3SM) Land Model (ELM) using a surrogate-assisted Bayesian framework. First, the polynomial chaos expansion machinery with Bayesian compressed sensing is used to construct computationally inexpensive surrogate models for ELM-simulated runoff at 0.5∘ × 0.5∘ for 1991–2010. The error metric between the ELM simulations and the benchmark data is selected to construct the surrogates, which facilitates efficient calibration and avoids the more conventional, but challenging, construction of high-dimensional surrogates for the ELM simulated runoff. Second, the Sobol' index sensitivity analysis is performed using the surrogate models to identify the most sensitive parameters, and our results show that, in most regions, ELM-simulated runoff is strongly sensitive to 3 of the 11 uncertain parameters. Third, a Bayesian method is used to infer the optimal values of the most sensitive parameters using an observation-based global runoff dataset as the benchmark. Our results show that model performance is significantly improved with the inferred parameter values. Although the parametric uncertainty of simulated runoff is reduced after the parameter inference, it remains comparable to the multimodel ensemble uncertainty represented by the global hydrological models in ISMIP2a. Additionally, the annual global runoff trend during the simulation period is not well constrained by the inferred parameter values, suggesting the importance of including parametric uncertainty in future runoff projections.

58 GEOSCIENCES↗

SU-D-206-05: A Critical Look at CBCT-Based Dose Calculation Accuracy as It Is Applied to Adaptive Radiotherapy

Purpose: Cone-beam CTs (CBCT) obtained from On-Board Imaging Devices (OBI) are increasingly being used for dose calculation purposes in adaptive radiotherapy. Patient and target morphology are monitored and the treatment plan is updated using CBCT. Due to the difference in image acquisition parameters, dose calculated in a CBCT can differ from planned dose. We evaluate the difference between dose calculation in kV CBCT and simulation CT, and the effect of HU-density tables in dose discrepancies Methods: HU values for various materials were obtained using a Catphan 504 phantom for a simulator CT (CTSIM) and two different OBI systems using three imaging protocols: Head, Thorax and Pelvis. HU-density tables were created in the TPS for each OBI image protocol. Treatment plans were made on each Catphan 504 dataset and on the head, thorax and pelvis sections of an anthropomorphic phantom, with and without the respective HU-density table. DVH information was compared among OBI systems and planning CT. Results: Dose calculations carried on the Catphan 504 CBCTs, with and without the respective CT-density table, had a maximum difference of −0.65% from the values on the planning CT. The use of the respective HU-density table decreased the percent differences from planned values by half in most of the protocols. For the anthropomorphic phantom datasets, the use of the correct HU-density table reduced differences by 0.89% on OBI1 and 0.59% on OBI2 for the head, 0.49% on OBI1 for the thorax, and 0.25% on OBI2 for the pelvis. Differences from planned values without HU-density correction ranged from 3.13% (OBI1, thorax) to 0.30% (OBI2, thorax). Conclusion: CT-density tables in the TPS yield acceptable differences when used in partly homogeneous medium. Further corrections are needed when the medium contains pronounced density differences for accurate CBCT calculation. Current difference range (1–3%) can be clinically acceptable.

60 APPLIED LIFE SCIENCES↗

Impact of Misclassification Rates on Compression Efficiency of Red Blood Cell Images of Malaria Infection Using Deep Learning

Malaria is a severe public health problem worldwide, with some developing countries being most affected. Reliable remote diagnosis of malaria infection will benefit from efficient compression of high-resolution microscopic images. This paper addresses a lossless compression of malaria-infected red blood cell images using deep learning. Specifically, we investigate a practical approach where images are first classified before being compressed using stacked autoencoders. We provide probabilistic analysis on the impact of misclassification rates on compression performance in terms of the information-theoretic measure of entropy. We then use malaria infection image datasets to evaluate the relations between misclassification rates and actually obtainable compressed bit rates using Golomb–Rice codes. Simulation results show that the joint pattern classification/compression method provides more efficient compression than several mainstream lossless compression techniques, such as JPEG2000, JPEG-LS, CALIC, and WebP, by exploiting common features extracted by deep learning on large datasets. This study provides new insight into the interplay between classification accuracy and compression bitrates. The proposed compression method can find useful telemedicine applications where efficient storage and rapid transfer of large image datasets is desirable.

59 BASIC BIOLOGICAL SCIENCES↗