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At least 1,351 records · Page 75

Enhanced climate reproducibility testing with false discovery rate correction

Simulating the Earth's climate is an important and complex problem, thus climate models are similarly complex, comprised of millions of lines of code. In order to appropriately utilize the latest computational and software infrastructure advancements in Earth system models running on modern hybrid computing architectures to improve their performance, precision, accuracy, or all three; it is important to ensure that model simulations are repeatable and robust. This introduces the need for establishing statistical or non-bit-for-bit reproducibility, since bit-for-bit reproducibility may not always be achievable. Here, we propose a short-simulation ensemble-based test for an atmosphere model to evaluate the null hypothesis that modified model results are statistically equivalent to that of the original model. We implement this test in version 2 of the US Department of Energy's Energy Exascale Earth System Model (E3SM). The test evaluates a standard set of output variables across the two simulation ensembles and uses a false discovery rate correction to account for multiple testing. The false positive rates of the test are examined using re-sampling techniques on large simulation ensembles and are found to be lower than the currently implemented bootstrapping-based testing approach in E3SM. We also evaluate the statistical power of the test using perturbed simulation ensemble suites, each with a progressively larger magnitude of change to a tuning parameter. The new test is generally found to exhibit more statistical power than the current approach, being able to detect smaller changes in parameter values with higher confidence.

Kelleher, Michael E. [Oak Ridge National Laborator↗

Characterization of U.S. Wave Energy Converter (WEC) Test Sites: A Catalogue of Met-Ocean Data, 2nd Edition

This report presents met-ocean data and wave energy characteristics at eight U.S. wave energy converter (WEC) test and potential deployment sites. Its purpose is to enable the comparison of wave resource characteristics among sites as well as the selection of test sites that are most suitable for a developer's device and that best meet their testing needs and objectives. It also provides essential inputs for the design of WEC test devices and planning WEC tests, including the planning of deployment, and operations and maintenance. For each site, this report catalogues wave statistics recommended in the International Electrotechnical Commission Technical Speci cation (IEC 62600-101 TS) on Wave Energy Characterization, as well as the frequency of occurrence of weather windows and extreme sea states, and statistics on wind and ocean currents. It also provides useful information on test site infrastructure and services.

16 TIDAL AND WAVE POWER↗

Characterization of U.S. Wave Energy Converter (WEC) test sites: a catalogue of met-ocean data (Second edition)

This report presents met-ocean data and wave energy characteristics at eight U.S. wave energy converter (WEC) test and potential deployment sites. Its purpose is to enable the comparison of wave resource characteristics among sites as well as the selection of test sites that are most suitable for a developer’s device and that best meet their testing needs and objectives. It also provides essential inputs for the design of WEC test devices and planning WEC tests, including the planning of deployment, and operations and maintenance. For each site, this report catalogues wave statistics recommended in the International Electrotechnical Commission Technical Specification (IEC 62600-101 TS) on Wave Energy Characterization, as well as the frequency of occurrence of weather windows and extreme sea states, and statistics on wind and ocean currents. It also provides useful information on test site infrastructure and services.

16 TIDAL AND WAVE POWER↗

Evaluation of Field-Mapping Data for the MI-Tech MI-506CE-1 Compact-Range Reflector in the Sandia National Laboratories' Facility for Antenna and Radar-cross-section Measurements (FARM)

The compact range, located at the Sandia National Laboratories Facility for Antenna and Radar-cross-section Measurements (FARM), has been upgraded by the addition of a new, larger reflector. The new reflector, an MI Technologies model MI-506CE-1, was installed and tested during August through October of 2013. Extensive field mapping was performed by MI Tech personnel, and that data is presented and examined here. Statistics describing the field quality are provided for the nominal test zone, as well as several reduced-size test zones. Spatial-frequency analysis has been applied to the data, and this process allows a determination of amplitude and direction information associated with unwanted reflected and diffracted field components arriving in the test zone.

42 ENGINEERING↗

Statistical Analysis of Strength Data for an Aerospace Aluminum Alloy

Aerospace vehicles are produced in limited quantities that do not always allow development of MIL-HDBK-5 A-basis design allowables. One method of examining production and composition variations is to perform 100% lot acceptance testing for aerospace Aluminum (Al) alloys. This paper discusses statistical trends seen in strength data for one Al alloy. A four-step approach reduced the data to residuals, visualized residuals as a function of time, grouped data with quantified scatter, and conducted analysis of variance (ANOVA).

Neergaard, Lynn↗

Statistical Analysis of Strength Data for an Aerospace Aluminum Alloy

Aerospace vehicles are produced in limited quantities that do not always allow development of MIL-HDBK-5 A-basis design allowables. One method of examining production and composition variations is to perform 100% lot acceptance testing for aerospace Aluminum (Al) alloys. This paper discusses statistical trends seen in strength data for one Al alloy. A four-step approach reduced the data to residuals, visualized residuals as a function of time, grouped data with quantified scatter, and conducted analysis of variance (ANOVA).

Neergaard, L.↗

Tools for Water Ingress Testing

The Safety Storage and Engineering Team, as part of the Production Support Services division (PSS-2), is tasked with ensuring the safety of containers used for handling and storage of nuclear materials. As part of this work, water ingress tests are conducted to evaluate the water-tightness of containers intended for in-glovebox use. In collaboration, the statistics group of the Computer and Computational Sciences Division (CCS-6) provided support in developing a statistically defensible approach for determining appropriate sample sizes for water ingress testing. Water ingress testing involves multiple measurements on multiple containers. Our approach uses a simple random effects model to analyze a pilot data set, implementing prediction limits to evaluate the efficacy of collecting additional data. Although this study capitalizes on available data, our approach can be used with estimates of the ratio of between and within variability and average values, often available from past testing or expert knowledge. An interactive Shiny tool was developed as a final user-friendly product for future testing. The Shiny interface is an open-source package providing a framework for building web applications. Raw data exploration and prediction interval-based sample size assessments can quickly be conducted by the engineering team without needing to interact with the underlying code.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Calculating Conductance of Ion Channels

We have simulated two small ion channels in a water/membrane system, which consists of 71,000-72,000 atoms, and have estimated the conductance by way of counting ions crossing these channels in applied field. The calculated values of conductance have been compared with predictions of the electrodiffusion model. In a recently developed theoretical framework, all commonly used assumptions of the model can be tested. If they are satisfied, which is often the case, the approach provides a rigorous way to extrapolate conductance calculated at one voltage to other voltages. This, in turn, allows for efficient estimations of current-voltage dependence, examining rectifying behavior of channels and calculating the reversal potential. Furthermore, the consistency of the results can be precisely tested. Simulations at microsecond time scales are required to sufficiently reduce statistical errors and separate them from possible systematic errors. Only then the accuracy of the proposed approach can be properly tested. Linking simulations with electrophysiology provides a stringent, highly relevant test for the correctness of computer simulations of ion channels. Considering biological, medical and pharmaceutical importance of these proteins, results of the proposed study might motivate the development of improved hardware and software that would enable applying a similar strategy to more complex channels at longer times.

Ion↗

Population Pharmacokinetics of Intranasal Scopolamine

Introduction: An intranasal gel dosage formulation of scopolamine (INSCOP) was developed for the treatment of Space Motion Sickness (SMS).The bioavailability and pharmacokinetics (PK) was evaluated using data collected in Phase II IND protocols. We reported earlier statistically significant gender differences in PK parameters of INSCOP at a dose level of 0.4 mg. To identify covariates that influence PK parameters of INSCOP, we examined population covariates of INSCOP PK model for 0.4 mg dose. Methods: Plasma scopolamine concentrations versus time data were collected from 20 normal healthy human subjects (11 male/9 female) after a 0.4 mg dose. Phoenix NLME was employed for PK analysis of these data using gender, body weight and age as covariates for model selection. Model selection was based on a likelihood ratio test on the difference of criteria (-2LL). Statistical significance for base model building and individual covariate analysis was set at P less than 0.05{delta(-2LL)=3.84}. Results: A one-compartment pharmacokinetic model with first-order elimination best described INSCOP concentration ]time profiles. Inclusion of gender, body weight and age as covariates individually significantly reduced -2LL by the cut-off value of 3.84(P less than 0.05) when tested against the base model. After the forward stepwise selection and backward elimination steps, gender was selected to add to the final model which had significant influence on absorption rate constant (ka) and the volume of distribution (V) of INSCOP. Conclusion: A population pharmacokinetic model for INSCOP has been identified and gender was a significant contributing covariate for the final model. The volume of distribution and Ka were significantly higher in males than in females which confirm gender-dependent pharmacokinetics of scopolamine after administration of a 0.4 mg dose.

Wu, L.↗

Separating the Chemical and Dynamical Contributions to the Ozone Change

Statistical analysis is used to extract the sensitivity of ozone to changes in stratospheric chlorine due to emissions of chlorofluorcarbons from the observed ozone record. The statistical analysis relies on a model that accounts for natural variations in ozone including the seasonal cycle, the solar cycle, variations in aerosols due to volcanic eruption, and the quasi- biennial oscillation, A noise term includes contributions to ozone variability due to inter-annual variability in the stratospheric circulation not due to the quasi-biennial oscillation, The residual circulation varies due to variability in planetary wave forcing, and studies using meteorological analyses show that the build-up of ozone over the winter is correlated with the planetary wave Eliassen-Palm flux. This variability in the residual circulation is not included in the statistical model, and contributes to the apparent ozone sensitivity to chlorine derived from observations for 1979 - 2000. We have investigated these relationships using multi-decadal simulations of our off-line chemistry and transport model (CTM). Our simulations use meteorological fields output from a 50 year simulation of a general circulation model (GCM). A 50 climatology specifies the sea surface temperatures to produce the GCM simulation. The CTM was used with these winds to produce two simulations, one in which the boundary conditions for chlorofluorcarbons and other source gases vary as specified for 1973-2022 by the Scenario A2 of the World Meteorological Organization ozone assessment, and the second with source gases fixed to their 1979 values. The same statistical analysis used to derive trends from observations is applied to the CTM output. When applied to the difference between the two simulations the statistical analysis provides a more precise measure of the ozone sensitivity to chlorine change. We are testing ways of including the interannual variability in the residual circulation in the statistical model so that we can derive the same result from the Scenario A2 simulation as is obtained when the statistical analysis is applied to the difference between the two simulations. This should provide direction as to how to account for the changes in ozone due to interannual variability in the residual circulation in the statistical model that is applied to the observed data record.

Douglass, Anne R.↗

Safety and Efficacy of Radiation Therapy in Advanced Melanoma Patients Treated With Ipilimumab

Purpose: Ipilimumab and radiation therapy (RT) are standard treatments for advanced melanoma; preclinical models suggest the potential for synergy. However, limited clinical information exists regarding safety and optimal timing of the combination. Methods and Materials: We reviewed the records of consecutive patients with unresectable stage 3 or 4 melanoma treated with ipilimumab. Patients were categorized as having received RT or not. Differences were estimated between these 2 cohorts. Results: We identified 88 patients treated with ipilimumab. At baseline, the ipilimumab-plus-RT group (n=44) had more unfavorable characteristics. Despite this, overall survival, progression-free survival, and both immune-related and non–immune-related toxicity were not statistically different (P=.67). Patients who received ipilimumab before RT had an increased duration of irradiated tumor response compared with patients receiving ipilimumab after RT (74.7% vs 44.8% at 12 months; P=.01, log-rank test). In addition, patients receiving ablative RT had non–statistically significantly improved median overall survival (19.6 vs 10.2 months), as well as 6-month (95.1% vs 72.7%) and 12-month (79.7% vs 48.5%) survival rates, compared with those treated with conventionally fractionated RT. Conclusions: We found that both ablative and conventionally fractionated RT can be safely administered with ipilimumab without a clinically apparent increase in toxicity. Patients who received ipilimumab before RT had an increased duration of irradiated tumor response.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

Deformation and fracture characteristics of zirconium plate produced via ultrasonic additive manufacturing

Abstract The microstructural evolution, deformation modes, and fracture mechanisms of zirconium plate produced using ultrasonic additive manufacturing (UAM) are presented. In addition to conventional tensile testing techniques, digital image correlation captured highly variable strain accumulation in specimens loaded perpendicular or parallel to the build height (Z). When tested in parallel to Z, delamination at prior foil/foil interfaces creates strain localization noticeable in strain rate maps, whereas specimens loaded perpendicular to Z illustrate conventional strain hardening until necking accelerates delamination. Although bond strengths are statistically and spatially variable, in situ electron backscattering diffraction tests illustrate the ability for grains near interfaces to accommodate strain with twinning and slip modes consistent with conventionally produced zirconium alloys. Finally, mixtures of ductile and delamination-induced fracture highlight the interface-driven failure modes of UAM zirconium plate in the as-built condition. Graphic abstract

36 MATERIALS SCIENCE↗

The influence of various test plans on mission reliability

Methods have been developed for the evaluation of cost effective vibroacoustic test plans for Shuttle Spacelab payloads. The shock and vibration environments of components have been statistically represented, and statistical decision theory has been used to evaluate the cost effectiveness of five basic test plans with structural test options for two of the plans. Component, subassembly, and payload testing have been performed for each plan along with calculations of optimum test levels and expected costs. The tests have been ranked according to both minimizing expected project costs and vibroacoustic reliability. It was found that optimum costs may vary up to $6 million with the lowest plan eliminating component testing and maintaining flight vibration reliability via subassembly tests at high acoustic levels.

Stahle, C. V.↗

Deep Learning Experiments for Tropical Cyclone Intensity Forecasts

Reducing tropical cyclone (TC) intensity forecast errors is a challenging task that has interested the operational forecasting and research community for decades. To address this, we developed a deep learning (DL)-based multilayer perceptron (MLP) TC intensity prediction model. The model was trained using the global Statistical Hurricane Intensity Prediction Scheme (SHIPS) predictors to forecast the change in TC maximum wind speed for the Atlantic basin. In the first experiment, a 24-h forecast period was considered. To overcome sample size limitations, we adopted a leave one year out (LOYO) testing scheme, where a model is trained using data from all years except one and then evaluated on the year that is left out. When tested on 2010–18 operational data using the LOYO scheme, the MLP outperformed other statistical–dynamical models by 9%–20%. Additional independent tests in 2019 and 2020 were conducted to simulate real-time operational forecasts, where the MLP model again outperformed the statistical–dynamical models by 5%–22% and achieved comparable results as HWFI. The MLP model also correctly predicted more rapid intensification events than all the four operational TC intensity models compared. In the second experiment, we developed a lightweight MLP for 6-h intensity predictions. When coupled with a synthetic TC track model, the lightweight MLP generated realistic TC intensity distribution in the Atlantic basin. Therefore, the MLP-based approach has the potential to improve operational TC intensity forecasts, and will also be a viable option for generating synthetic TCs for climate studies.

58 GEOSCIENCES↗

SU-F-T-392: Superior Brainstem and Cochlea Sparing with VMAT for Glioblastoma Multiforme

Purpose: Volumetric arc therapy (VMAT) can provide similar target coverage and normal tissue sparing as IMRT but with shorter treatment times. At our institution VMAT was adopted for the treatment glioblastoma multiforme (GBM) after a small number of test plans demonstrated its non-inferiority. In this study, we compare actual clinical treatment plans for a larger cohort of patients treated with either VMAT or IMRT. Methods: 90 GBM patients were included in this study, 45 treated with IMRT and 45 with VMAT. All planning target volumes (PTVs) were prescribed a dose of 50 Gy, with a simultaneous integrated boost to 60 Gy. Most IMRT plans used 5 non-coplanar beams, while most VMAT plans used 2 coplanar beams. Statistical analysis was performed using Fisher’s exact test or the Wilcoxon-Mann-Whitney rank sum test. Included in the analysis were patient and treatment characteristics as well as the doses to the target volumes and organs at risk. Results: Treatment times for the VMAT plans were reduced by 5 minutes compared with IMRT. The PTV coverage was similar, with at least 95% covered for all plans, while the median boost PTV dose differed by 0.1 Gy between the IMRT and VMAT cohorts. The doses to the brain, optic chiasm, optic nerves and eyes were not significantly different. The mean dose to the brainstem, however, was 9.4 Gy less with VMAT (p<0.001). The dose to the ipsilateral and contralateral cochleae were respectively 19.7 and 9.5 Gy less (p<0.001). Conclusion: Comparison of clinical treatment plans for separate IMRT and VMAT cohorts demonstrates that VMAT can save substantial treatment time while providing similar target coverage and superior sparing of the brainstem and cochleae. To our knowledge this is the first study to demonstrate this benefit of VMAT in the management of GBM.

60 APPLIED LIFE SCIENCES↗

Topographically Induced Thermal Effects on Lunar Hydrogen Distributions: Correlated Observations from the LRO LEND and LOLA Instruments

The question of whether water exists on the Moon's surface has long been an enigma to Lunar researchers. Largely, this was due to the thermally extreme lunar surface environment that would seem to preclude any long term maintenance, manufacture, transport or accumulation of hydrogen (H) volatiles over most of the lunar surface. As a result, for many years the cold permanent shadow regions (PSR) in the bottoms of craters near the lunar poles appeared to provide the basic conditions at least for maintenance of lunar hydrogen. Importantly, recent discoveries indicate that there is some hydrogen at the poles. However, the picture of the lunar hydrogen budget may be more complex than the PSR hypothesis has suggested. This evidence comes from observations by the Lunar Exploration Neutron Detector (LEND) onboard the Lunar Reconnaissance Orbiter (LRO) that inclici1te 1) some H concentrations lie outside PSR and 2) though a few of the larger PSR's have high hydrogen, PSR does not appear to be an independent factor influencing the large-scale suppression of polar epithermals observed by LEND and the Lunar Prospector Neutron Spectrometer. In this research we investigate the possibility that the thermal contrast between pole-facing and equator facing-slopes is a factor influencing the surface distributions of lunar H. We perform this bulk correlated observation and study by developing a thermal proxy from slope data of the Lunar Orbiting Laser Altimeter (LOLA) digital elevation model (DEM) which is registered with the collimated LEND epithermal map. From the LOLA transforms we impose a thermal functional decomposition and systematic statistical analysis of the LEND epithermal map. Our hypothesis testing suggests in most high latitude bands studied> +/- 45 deg: Epithermal rates in pole-facing slopes are significantly lower than epithermal rates in equivalent equator-facing slopes. As a control study, we find that there is no statistically significant difference between equivalent east and west facing slopes. This finding suggests topographic modulation of insolation is a factor influencing the lunar H budget. Importantly, this result is consistent with observations in terrestrial, Martian research.

McClanahan, T. P.↗

Application of Markov Chain Monte Carlo for Uncertainty Quantification in Quantitative Imaging Problems

The Differential Evolution Adaptive Metropolis (DREAM) method, a Markov chain Monte Carlo approach, is used for optimization and uncertainty analysis of a radioactive source/shield system using pixelated measured data generated by radiation imagers, where each pixel in the image contains a gamma-ray spectrum with statistical uncertainty. DREAM uses this spectral information to determine source thickness and source strength while also propagating uncertainty from the measured data to the solution. Using measurements simulated with GEANT4, successful parameter reconstruction is demonstrated on a numerical test case in a slab/shield geometry. In the presence of statistical noise of 5-9%, parameters are calculated to better than 95% with 2σ error bars that generally encompass the actual values. In a test problem with real-world measurements, source strength per energy line is calculated to within 78-97% of the actual value.

Bledsoe, Keith↗