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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 1,369 records · Page 76
All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

Multi-objective optimization of root phenotypes for nutrient capture using evolutionary algorithms

Root phenotypes are avenues to the development of crop cultivars with improved nutrient capture, which is an important goal for global agriculture. The fitness landscape of root phenotypes is highly complex and multidimensional. It is difficult to predict which combinations of traits (phene states) will create the best performing integrated phenotypes in various environments. Brute force methods to map the fitness landscape by simulating millions of phenotypes in multiple environments are computationally challenging. Evolutionary optimization algorithms may provide more efficient avenues to explore high dimensional domains such as the root phenotypic space. We coupled the three-dimensional functional–structural plant model, SimRoot, to the Borg Multi-Objective Evolutionary Algorithm (MOEA) and the evolutionary search over several generations facilitated the identification of optimal root phenotypes balancing trade-offs across nutrient uptake, biomass accumulation, and root carbon costs in environments varying in nutrient availability. Our results show that several combinations of root phenes generate optimal integrated phenotypes where performance in one objective comes at the cost of reduced performance in one or more of the remaining objectives, and such combinations differed for mobile and non-mobile nutrients and for maize (a monocot) and bean (a dicot). Functional–structural plant models can be used with multi-objective optimization to identify optimal root phenotypes under various environments, including future climate scenarios, which will be useful in developing the more resilient, efficient crops urgently needed in global agriculture.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

Quantum time dynamics employing the Yang-Baxter equation for circuit compression

Quantum time dynamics (QTD) is considered a promising problem for quantum supremacy on near-term quantum computers. However, QTD quantum circuits grow with increasing time simulations. This study focuses on simulating the time dynamics of one-dimensional (1D) integrable spin chains with nearest-neighbor interactions. We have proved the existence of a reflection symmetry in the quantum circuit employed for simulating the time evolution of certain classes of 1D Heisenberg model Hamiltonians by virtue of the quantum Yang-Baxter equation, and how this symmetry can be exploited to compress and produce a shallow quantum circuit. With this compression scheme, the depth of the quantum circuit becomes independent of step size and only depends on the number of spins. We show that the depth of the compressed circuit is rigorously a linear function of the system size for the studied Heisenberg model Hamiltonians in the present work. As a consequence, the number of CNOT gates in the compressed circuit only scales quadratically with the system size, which allows for the simulations of time dynamics of very large 1D spin chains. We derive the compressed circuit representations for different special cases of the Heisenberg Hamiltonian. We compare and demonstrate the effectiveness of this approach by performing simulations on quantum computers.

1-dimensional spin chains↗
DOE OSTI2016

On the Degradation of the Effectiveness of Nonlinear Diffusion Acceleration with Parallel Block Jacobi Splitting

MOOSE's radiation transport module Rattlesnake comprises a first order S N solver that can be accelerated with a flexible Nonlinear Diffusion Acceleration. At each NDA iteration, the streaming and collision operator of the S{sub N} equations are (approximately) inverted using a transport sweep. When executed on multiple processors parallel block Jacobi (PBJ) splitting is utilized lagging the processor sub-domain's incoming angular fluxes making the implemented method asynchronous, i.e. the convergence properties of NDA become dependent on the number of concurrent tasks and details of the partitioning. Within this work, we study the NDA convergence properties for the two-dimensional C5G7 benchmark problem PBJ with p = 1, 2, 4, 8, 12, 16, 24, 32, 48, 60, 72, 96 and 144 concurrent tasks. Rosa studied the convergence properties of PBJ splitting methods with and without transport synthetic acceleration (TSA) in slab geometry and two-dimensional Cartesian geometry, respectively. Rosa's iteration scheme lags both the incoming angular fluxes and the scattering source making it very similar to the method described here. Rosa found by means of Fourier analysis that convergence of unaccelerated PBJ can degrade for optically thin subdomains, i.e. for a large number of processors given a fixed domain size. Depending on the choice of parameters application of TSA can lead to an effective algorithm. In contrast to Rosa's work, this work focuses on PBJ splitting for NDA accelerated solution of the multigroup eigenvalue problem. Later, Zerr and Anistratov used their integral transport matrix method in conjunction with PBJ. This iteration scheme is different as it does not lag the scattering source. Nevertheless, Fourier analysis with Diamond Difference spatial discretization showed that the method degrades with increasing the overall size of the spatial domain while keeping the sub-domain size constant. In the case of an infinite medium, the observed spectral radius becomes unity. These references establish the iterative performance of PBJ for one-group fixed source problems discretized on rectangular cells, but for the Rattlesnake first order NDA method, an emphasis lies on multigroup eigenvalue problems. In this setting, the additional complication arises that the low order equations are not exactly inverted, but only to some iterative criterion. Further, as the low order problem is solved using Jacobian-Free Newton Krylov methods, a suitable preconditioner for the GMRES iterations is required. As the effectiveness of the preconditioners may decrease when more concurrent processes are used, we expect the low order solve to impact the overall effectiveness of the NDA method in parallel execution as well. Therefore, this work focuses on the question of how detrimental the asynchronicity of the high and low order iterative solutions is for the effectiveness of NDA solutions of realistic, unstructured grid, multigroup eigenvalue problems. The iterative convergence properties of Rattlesnake's NDA method for multigroup eigenvalue problems are studied for varying number of concurrent processes. Rattlesnake's NDA method is asynchronous because the high order transport sweep uses PBJ splitting and because the low order solve's preconditioners, algebraic multigrid and additive Schwarz, are asynchronous. We found that up to 144 processes the number of Picard iterations increases by a factor of 2-3 affecting but not destroying NDA's parallel performance for the C5G7 benchmark problem, a representative LWR (light water reactor) configuration. The solution of the NDA low order eigenvalue problem posed greater problems than expected for the solvers currently available in Rattlesnake mainly because of problems to effectively precondition the modified low-order problem. As a matter of fact, the low order problem becomes an advection-diffusion problem. Non-robustness was observed for the AMG preconditioned coarse mesh acceleration for more than 60 concurrent processes, which was fixed by increasing the number of permissible V-cycles per AMG call. For fine mesh acceleration AMG proved to be ineffective and we resorted to ASM. For both AMG and ASM, increasing number of linear iterations per nonlinear are observed when increasing the number of processes, but for ASM this problem appears to be worse. The results from this work also indicate that initial development efforts should be diverted from implementation of a high-order parallel sweeping algorithm to the effective and robust iterative solution of the low order NDA multigroup eigenvalue problem. (authors)

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2020

3D Coded SUMMA: Communication-Efficient and Robust Parallel Matrix Multiplication

In this paper, we propose a novel fault-tolerant parallel matrix multiplication algorithm called 3D Coded SUMMA that achieves higher failure-tolerance than replication-based schemes for the same amount of redundancy. This work bridges the gap between recent developments in coded computing and fault-tolerance in high-performance computing (HPC). The core idea of coded computing is the same as algorithm-based fault-tolerance (ABFT), which is weaving redundancy in the computation using error-correcting codes. In particular, we show that MatDot codes, an innovative code construction for parallel matrix multiplications, can be integrated into three-dimensional SUMMA (Scalable Universal Matrix Multiplication Algorithm [30]) in a communication-avoiding manner. To tolerate any two node failures, the proposed 3D Coded SUMMA requires ~50% less redundancy than replication, while the overhead in execution time is only about 5–10%.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2016

Fast Parallel Stochastic Subspace Algorithms for Large-Scale Ambient Oscillation Monitoring

With the installation of synchrophasors widely across the power grid, measurement-based oscillation monitoring algorithms are becoming increasingly useful in identifying the real-time oscillatory modal properties in power systems. When the number of phasor measurement unit (PMU) channels grows, the computational time of many PMU data based algorithms is dominated by the computational burden in processing large-scale dense matrices. In order to overcome this limitation, this paper presents new formulations and computational strategies for speeding up an ambient oscillation monitoring algorithm, namely, stochastic subspace identification (SSI). Based on previous work, two fast singular value decomposition (SVD) approaches are first applied to the SVD evaluation within the SSI algorithm. Next, block structures are exploited so that the large-scale dense matrix computations can be processed in parallel. This helps in memory savings as well as in overall computational time. Experimental results from three sets of archived data of the western interconnection demonstrate that the new approaches can provide significant speedups while retaining modal estimation accuracy. With proposed fast parallel algorithms, the real-time oscillation monitoring of the large-scale system using hundreds of PMU measurements becomes feasible.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2022

Solving Large‐Scale Linear Systems of Equations by a Quantum Hybrid Algorithm

Abstract Today's intermediate‐scale quantum computers, although imperfect, already perform computational tasks that are manifestly beyond the capabilities of modern classical supercomputers. However, so far, quantum‐enabled large‐scale solutions have been realized only for limited set of problems. Here a hybrid algorithm based on phase estimation and classical optimization of the circuit width and depth is employed for solving a specific class of large linear systems of equations ubiquitous to many areas of science and engineering. A classification of linear systems based on the entanglement properties of the associated phase‐estimation unitary operation is introduced, enabling a highly efficient search for solutions that is facilitated by a straightforward matrix‐to‐circuit map. A 2 17 ‐dimensional problem is implemented on several IBM quantum computer superconducting quantum processors, a record‐breaking result for a linear system solved by a quantum computer. Demonstrated realisation sets a clear benchmark in the quest for the future quantum speedup in the linear systems of equations solution.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2021

A Stochastic Multi-Criteria Decision-Making Algorithm for Dynamic Load Prioritization in Grid-Interactive Efficient Buildings

Increasing deployment of advanced sensing, controls, and communication infrastructure enables buildings to provide services to the power grid, leading to the concept of grid-interactive efficient buildings. Since occupant activities and preferences primarily drive the availability and operational flexibility of building devices, there is a critical need to develop occupant-centric approaches that prioritize devices for providing grid services, while maintaining the desired end-use quality of service. In this paper, we present a decision-making framework that facilitates a building owner/operator to effectively prioritize loads for curtailment service under uncertainties, while minimizing any adverse impact on the occupants. The proposed framework uses a stochastic (Markov) model to represent the probabilistic behavior of device usage from power consumption data, and a load prioritization algorithm that dynamically ranks building loads using a stochastic multi-criteria decision-making algorithm. The proposed load prioritization framework is illustrated via numerical simulations in a residential building use-case, including plug-loads, air-conditioners, and plug-in electric vehicle chargers, in the context of load curtailment as a grid service. Suitable metrics are proposed to evaluate the closed-loop performance of the proposed prioritization algorithm under various scenarios and design choices. Scalability of the proposed algorithm is established via computational analysis, while time-series plots are used for intuitive explanation of the ranking choices.

24 POWER TRANSMISSION AND DISTRIBUTION↗
DOE OSTI2016

Power Converter Control Algorithm Design and Simulation for the NREL Next-Generation Drivetrain: July 8, 2013 - January 7, 2016

The National Renewable Energy Laboratory (NREL) and NREL Next-Generation Drivetrain Partners are developing a next-generation drivetrain (NGD) design as part of a Funding Opportunity Announcement award from the U.S. Department of Energy. The proposed NGD includes comprehensive innovations to the gearbox, generator, and power converter that increase the gearbox reliability and drivetrain capacity, while lowering deployment and operation and maintenance costs. A key task within this development effort is the power converter fault control algorithm design and associated computer simulations using an integrated electromechanical model of the drivetrain. The results of this task will be used in generating the embedded control software to be utilized in the power converter during testing of the NGD in the National Wind Technology Center 2.5-MW dynamometer. A list of issues to be addressed with these algorithms was developed by review of the grid interconnection requirements of various North American transmission system operators, and those requirements that presented the greatest impact to the wind turbine drivetrain design were then selected for mitigation via power converter control algorithms.

17 WIND ENERGY↗
DOE OSTI2025

ODIN: Probing the LAE Ly α Luminosity Function across Cosmic Time and Different Environments

The ubiquity and relative ease of discovery make 2 ≲ z ≲ 5 Lyα emitting galaxies (LAEs) ideal tracers for large-scale structure of the distant Universe. In addition, because Lyα is a resonance line, but frequently observed at large equivalent width, it is potentially a probe of galaxy evolution. The LAE Lyα luminosity function (LF) is an essential measurement for making progress on both of these topics. Although several studies have computed the LAE LF, very few have delved into how the function varies with environment. The large area and depth of the One-hundred-deg 2 DECam Imaging in Narrowbands (ODIN) survey makes such measurements possible at the cosmic noon redshifts of z ∼ 2.4, 3.1, and 4.5. In this initial work, we present algorithms needed to rigorously compute the LAE LF, and test them on the ∼16,000 ODIN LAEs found in the extended COSMOS field. Using these limited samples, we find weak evidence that protocluster environments suppress the numbers of faint LAEs compared to the field. We also find that the LF decreases in number density and evolves towards a steeper faint-end slope over cosmic time from z ∼ 4.5 to z ∼ 2.4.

Lyman-alpha galaxies↗
DOE OSTI2022

Improving SGP4 Orbit Determination with New State Estimation Algorithm

The Simplified General Perturbations 4 Model (SGP4) is a well-known tool for performing satellite orbit determination. However, uncertainties and inaccuracies in the initial state inputs (required by SGP4) degrade the performance of the propagator. We present a new state estimation algorithm that allows for independent computation of these initial inputs using Unscented Kalman Filtering and GPS data from a satellite. The algorithm is tested on real flight data and demonstrates a notable performance improvement over the standard method of orbit determination using SGP4.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2017

Recovering Topology of Nested Volumes Represented by Single Closed Surfaces

As scientific computing abilities continue to advance, so too have the efforts to model and simulate highly complex geometries in radiation environments. Modeling has advanced from primitive constructive solid geometry (CSG) to voxelized models, and now to high fidelity polygon mesh models. While polygon mesh surface models are very accurate, most Monte Carlo codes do not allow for their direct use. Often they are converted to voxel or tetrahedral mesh models and then used with the physics codes. The Direct Accelerated Geometry Monte Carlo (DAGMC) software package has the ability to efficiently run transport calculations directly on tessellated surface models. Typically the surface meshes used for DAGMC calculations come from CAD-based geometry models generated by solid modeling software. In some cases geometries of interest, like human phantoms, are generated by other means and may not contain all of the necessary information for particle transport. For example, mesh geometries in the OBJ file format contain vertex and connectivity data for each surface, but do not have any information about surface topology. These types of file formats necessitate a tool that can build a hierarchy of surfaces and reconstruct the topological information. The generate hierarchy tool was developed for this purpose. The following summary will explain the algorithm behind the tool, describe a test case, and finally demonstrate a real-world application of the tool with an MCNP5 calculation that directly uses a polygon mesh human phantom.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2026

Clifford transformations for fermionic quantum systems: From Pauli and Majorana operators to Dirac fermions

Clifford gates and transformations, which map products of elementary Pauli or Majorana operators to other such products, are foundational in quantum computing, underpinning the stabilizer formalism, error-correcting codes, magic state distillation, quantum communication and cryptography, and qubit tapering. Moreover, circuits composed entirely of Clifford gates are classically simulatable, highlighting their computational significance. In this article we extend the concept of Clifford transformations to Dirac fermions. We demonstrate that discrete Clifford transformations are generated by half-body and pair operators while continuous Clifford transformations are generated by number operators, providing a systematic framework for their characterization. Additionally, we establish connections with fermionic mean-field theories and applications in qubit tapering, offering insights into their broader implications in quantum computing.

74 ATOMIC AND MOLECULAR PHYSICS↗
DOE OSTI2016

Diffraction pattern simulation of cellulose fibrils using distributed and quantized pair distances

Intensity simulation of X-ray scattering from large twisted cellulose molecular fibrils is important in understanding the impact of chemical or physical treatments on structural properties such as twisting or coiling. This paper describes a highly efficient method for the simulation of X-ray diffraction patterns from complex fibrils using atom-type-specific pair-distance quantization. Pair distances are sorted into arrays which are labelled by atom type. Histograms of pair distances in each array are computed and binned and the resulting population distributions are used to represent the whole pair-distance data set. These quantized pair-distance arrays are used with a modified and vectorized Debye formula to simulate diffraction patterns. This approach utilizes fewer pair distances in each iteration, and atomic scattering factors are moved outside the iteration since the arrays are labelled by atom type. As a result, this algorithm significantly reduces the computation time while maintaining the accuracy of diffraction pattern simulation, making possible the simulation of diffraction patterns from large twisted fibrils in a relatively short period of time, as is required for model testing and refinement.

09 BIOMASS FUELS↗
DOE OSTI2016

Optimization of tomographic reconstruction workflows on geographically distributed resources

New technological advancements in synchrotron light sources enable data acquisitions at unprecedented levels. This emergent trend affects not only the size of the generated data but also the need for larger computational resources. Although beamline scientists and users have access to local computational resources, these are typically limited and can result in extended execution times. Applications that are based on iterative processing as in tomographic reconstruction methods require high-performance compute clusters for timely analysis of data. Here, time-sensitive analysis and processing of Advanced Photon Source data on geographically distributed resources are focused on. Two main challenges are considered: (i) modeling of the performance of tomographic reconstruction workflows and (ii) transparent execution of these workflows on distributed resources. For the former, three main stages are considered: (i) data transfer between storage and computational resources, (i) wait/queue time of reconstruction jobs at compute resources, and (iii) computation of reconstruction tasks. These performance models allow evaluation and estimation of the execution time of any given iterative tomographic reconstruction workflow that runs on geographically distributed resources. For the latter challenge, a workflow management system is built, which can automate the execution of workflows and minimize the user interaction with the underlying infrastructure. The system utilizes Globus to perform secure and efficient data transfer operations. The proposed models and the workflow management system are evaluated by using three high-performance computing and two storage resources, all of which are geographically distributed. Workflows were created with different computational requirements using two compute-intensive tomographic reconstruction algorithms. Experimental evaluation shows that the proposed models and system can be used for selecting the optimum resources, which in turn can provide up to 3.13× speedup (on experimented resources). Furthermore, the error rates of the models range between 2.1 and 23.3% (considering workflow execution times), where the accuracy of the model estimations increases with higher computational demands in reconstruction tasks.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2018

Cabana

Physics simulations that use particles in their algorithms are ubiquitous on modern high performance computers. Cabana is a C++ library for developing particle-based simulations on heterogeneous high performance computing platforms. Cabana provides general data structures and algorithms for common particle operations in a way that is both performant and portable on HPC systems. This includes particle data structure allocatable and configurable on GPU and CPU architectures, and threaded and distributed algorithms for sorting particles, halo exchanges, neighbor list generation, and other basic particle operations.

Slattery, StuartR↗
DOE OSTI2024

Establishing capabilities for quantum computing and simulations for energy applications

Quantum information science (QIS) is creating potential transformative opportunities to exploit intricate quantum mechanical phenomena in new ways for obtaining and processing information to advance many areas of science and engineering. Since the National Quantum Initiative Act was signed into law in 2018, developing QIS capability and competency is one of the most urgent tasks of DOE to make sure the US win the quantum race. The QIS contains four pillars: quantum computing, quantum simulations, quantum sensing, and quantum networking. To apply QIS in energy related applications, the key is to develop the capability of quantum computing & simulation tools. In this project, we propose to develop the capability of quantum computing and simulations at NETL to target fossil energy related problems. We will install a simulator (e. g. IBM qiskit) on the NETL supercomputer to simulate the environments of quantum computer. Based on the current available quantum algorithms for quantum chemistry, we will develop quantum computing codes to perform simulation which will focus on fossil energy sector challenges, including CO2 capture & conversion, sensing, and fuel conversion. We then will seek opportunities to run our codes on real quantum computers (such as IBM-Q, google Sycamore, etc.). Through this project, the new capability of quantum computing and simulations will be established at NETL. In addition, the NETL workforce in this area will be trained ready to conduct more complicated tasks in line with NETL missions to enhance the nation’s energy foundation.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2017

TeaLeaf: A Mini-Application to Enable Design-Space Explorations for Iterative Sparse Linear Solvers

Iterative sparse linear solvers are an important class of algorithm in high performance computing, and form a crucial component of many scientific codes. As intra and inter node parallelism continues to increase rapidly, the design of new, scalable solvers which can target next generation architectures becomes increasingly important. In this work we present TeaLeaf, a recent mini-app constructed to explore design space choices for highly scalable solvers. We then use TeaLeaf to compare the standard CG algorithm with a Chebyshev Polynomially Preconditioned Conjugate Gradient (CPPCG) iterative sparse linear solver. CPPCG is a communication-avoiding algorithm, requiring less global communication than previous approaches. TeaLeaf includes support for many-core processors, such as GPUs and Xeon Phi, and we include strong-scaling results across a range of world-leading Petascale supercomputers, including Titan and Piz Daint.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2017

Task allocation in geo-distributed cyber-physical systems - 256

This paper studies the task allocation algorithm for a distributed test facility (DTF), which aims to assemble geo-distributed cyber (software) and physical (hardware in the loop) components into a prototype cyber-physical system (CPS). This allows low cost testing on an early conceptual prototype (ECP) of the ultimate CPS (UCPS) to be developed. The DTF provides an instrumentation interface for carrying out reliability experiments remotely such as fault propagation analysis and in-situ testing of hardware and software components in a simulated environment. Unfortunately, the geo-distribution introduces an overhead that is not inherent to the UCPS, i.e. a significant time delay in communication that threatens the stability of the ECP and is not an appropriate representation of the behavior of the UCPS. This can be mitigated by implementing a task allocation algorithm to find a suitable configuration and assign the software components to appropriate computational locations, dynamically. This would allow the ECP to operate more efficiently with less probability of being unstable due to the delays introduced by geo-distribution. The task allocation algorithm proposed in this work uses a Monte Carlo approach along with Dynamic Programming to identify the optimal network configuration to keep the time delays to a minimum. (authors)

97 MATHEMATICS AND COMPUTING↗