Results for “data parallel” — Page 77

DOE OSTI2015

A mechanism for the dynamo terms to sustain closed-flux current, including helicity balance, by driving current which crosses the magnetic field

An analysis of imposed dynamo current drive (IDCD) [T.R. Jarboe et al., Nucl. Fusion 52 083017 (2012)] reveals: (a) current drive on closed flux surfaces seems possible without relaxation, reconnection, or other flux-surface-breaking large events; (b) the scale size of the key physics may be smaller than is often computationally resolved; (c) helicity can be sustained across closed flux; and (d) IDCD current drive is parallel to the current which crosses the magnetic field to produce the current driving force. In addition to agreeing with spheromak data, IDCD agrees with selected tokamak data.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

DOE OSTI2020

Progress in modelling fast-ion D-alpha spectra and neutral particle analyzer fluxes using FIDASIM

FIDASIM is a code that models signals produced by charge-exchange reactions between neutrals and ions (both fast and thermal) in magnetically confined plasmas. With the ion distribution function as input, the code predicts the efflux to a neutral particle analyzer diagnostic and the photon radiance of Balmer-alpha light to a fast-ion D α diagnostic, in addition to many other related quantities. A new, parallelized version of the Monte Carlo code FIDASIM has been developed in Fortran90 that is substantially faster than the original interactive data language version. Modified algorithms include more accurate treatments of the time dependent collisional-radiative equations that describe neutral energy levels, of the cloud of ‘halo’ neutrals that surround the injected neutral beam, and of finite Larmor radius effects. Enhanced physics capabilities include modelling ‘passive’ signals from cold edge neutrals, the ability to treat general three-dimensional magnetic confinement configurations, and calculations of diagnostic-specific weight functions that enable tomographic reconstructions of the fast-ion distribution function. Neutral beam attenuation, beam emission, and fast-ion birth profiles are also modelled. Finally, the new algorithms have been successfully validated against experimental data and new features have been tested through benchmarks between two independently developed versions of the code.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

DOE OSTI2021

The status of the Japanese material properties handbook and the challenge to facilitate structural design criteria for DEMO in-vessel components

This work summarizes the current status of the material properties handbook for a structural design using Japanese reduced-activation ferritic/martensitic steel F82H. Specifically, the key structural parameters, e.g. time-independent/dependent design stresses and fatigue design curves, were determined by following the French structural design code RCC-MRx. Moreover, under the Japan–U.S. collaboration, tensile data were newly added to the benchmark heavy irradiation data up to 80 dpa, as critical input information in the intermediate check and review in Japan. Furthermore, the status of structural material data and the near-term and long-term issues were clarified by the evaluation using the attribute guides. In parallel, the structural design approaches, which were newly introduced and extended to cope with the structural design issues under the complex environmental conditions peculiar to the DEMO reactor, were noted with the initial R&D results. Of the many design issues, the multi-axial loading conditions due to the complexity of the DEMO reactor as well as the coolant compatibility and the irradiation effect are mentioned. For example, in the paper, multi-axial fatigue–creep testing and evaluation using the modified universal slope method and brittle/ductile fracture testing and evaluation using the local approach are explained toward DEMO.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

DOE OSTI2022

Modeling pre-Exascale AMR Parallel I/O Workloads via Proxy Applications

The present work investigates the modeling of preexascale input/output (I/O) workloads of Adaptive Mesh Refinement (AMR) simulations through a simple proxy application. We collect data from the AMReX Castro framework running on the Summit supercomputer for a wide range of scales and mesh partitions for the hydrodynamic Sedov case as a baseline to provide sufficient coverage to the formulated proxy model. The non-linear analysis data production rates are quantified as a function of a set of input parameters such as output frequency, grid size, number of levels, and the Courant-Friedrichs-Lewy (CFL) condition number for each rank, mesh level and simulation time step. Linear regression is then applied to formulate a simple analytical model which allows to translate AMReX inputs into MACSio proxy I/O application parameters, resulting in a simple “kernel” approximation for data production at each time step. Results show that MACSio can simulate actual AMReX nonlinear “static” I/O workloads to a certain degree of confidence on the Summit supercomputer using the present methodology. The goal is to provide an initial level of understanding of AMR I/O workloads via lightweight proxy applications models to facilitate autotune data management strategies in anticipation of exascale systems.

Godoy, William↗

DOE OSTI2014

HSLOT: The HERCULES Scriptable Loop Transformations Engine

HSLOT arms users with a rich set of configurable transformation directives, to be used as-they-are or to be specialized and combined into powerful custom transformations. We offer a plethora of loop transformations, which includes both the classic set (unroll, fuse, fission, tile, and so on) as well as unique ones (specialize, swap nest, split, fork, and so on) that are not found in other state-of-the-art systems. We show how HSLOT enables more transformations such as merging two loops that cannot be fused because of data dependencies and how HSLOT can be used in a simple and systematic fashion to improve memory accesses and expose better parallelism. To use our system, users simply annotate loops with the transformations sequence and compile with our Open64-based HSLOTimplementing Fortran compiler, HSLF90, which produces both object files and optionally source. We describe our experiment results using a set of scientific kernels written in Fortran with HSLOT directives on AMD 32 core system.

Kartsaklis, Christos↗

DOE OSTI2020

Machine Learning for Distributed Acoustic Sensing data (MLDAS) v1.0.1

MLDAS is a Python-written package for exploratory data analysis and deep learning training on Distributed Acoustic Sensing data. The machine learning tools are powered by the PyTorch library and designed to work efficiently on large scale datasets using parallel computing. Various SLURM scripts as well as a tutorial have also been made available to allow geophysicists to quickly and easily implement the available tools in their analysis workflow on supercomputer facilities.

Dumont, Vincent↗

DOE OSTI2024

CORRLA-RS

The CORRLA-RS package provides a suite of statistical methods for sampling multidimensional distributions and to conduct sensitivity and correlation analysis of large scale data in the Rust programming language. The software provides a unique solution to multidimensional constrained sampling problems utilizing a combination of parallelized Markov Chain Monte Carlo methods and traditional rejection sampling. The sensitivity and correlation analysis methods are backed by a high performance randomized singular value decomposition implementation which enables datasets larger than the random access memory (RAM) size to be analyzed. Additionally, CORRLA-RS implements the active subspace identification method using a KD-Tree and the randomized singular value decomposition acting in concert.

Gurecky, William [Oak Ridge National Laboratory (O↗

DOE OSTI2024

CMIP6-based Multi-model Streamflow Projections over the Conterminous US, Version 1.1

This dataset presents an ensemble of streamflow projections covering the conterminous United States (CONUS), developed to support the SECURE Water Act Section 9505 Assessment for the US Department of Energy (DOE) Water Power Technologies Office (WPTO). Multiple Coupled Models Intercomparison Project phase 6 (CMIP6) Global Climate Models (GCMs) were downscaled using either statistical (DBCCA) or dynamical (RegCM) downscaling methods, based on two meteorological reference datasets (Daymet and Livneh). Subsequently, the downscaled precipitation, temperature, and wind speed data were used to drive two calibrated hydrologic models (VIC and PRMS), with total runoff routed through the Routing Application for Parallel computatIon of Discharge (RAPID) routing model, producing an ensemble of streamflow projections across 2.7 million NHDPlusV2 stream reaches across the CONUS. Each ensemble member covers the 1980-2019 baseline and 2020-2059 near-future periods under the high-end (SSP585) emission scenario. Additionally, using only DBCCA and Daymet, the projections extend to the 2060-2099 far-future period and encompass three additional emission scenarios (SSP370, SSP245, and SSP126). This dataset is designed to support the SECURE Water Act Section 9505 Assessment for the US Department of Energy (DOE) Water Power Technologies Office (WPTO). For further details, refer to Kao et al. (2022), Rastogi et al. (2022), and Ghimire et al. (2023).

13 HYDRO ENERGY↗

DOE OSTI2025

Altermagnetic behavior in OsO2: Parallels with RuO2

This dataset contains input and output files from DFT simulations used to reproduce the electronic and phonon band structures of bulk OsO₂ and RuO₂. The files include data from initial electronic structure and phonon calculations performed with Hubbard-U correction (i.e., Antiferromagnetic, AFM) and without Hubbard-U correction (i.e., Non-magnetic, NM). The electronic structure calculations are provided both with and without spin-orbit coupling (SOC). The computed electronic properties are compared with existing literature, while the calculated phonon density of states (PhDOS) is compared with experimental PhDOS.

36 MATERIALS SCIENCE↗

DOE OSTI2017

2011.2 Revision of the Evaluated Nuclear Data Library (ENDL2011.2)

LLNL's Computational Nuclear Physics Group and Nuclear Theory and Modeling Group have col- laborated to create the 2011.2 revised release of the Evaluated Nuclear Data Library (ENDL2011.2). ENDL2011.2 is designed to support LLNL's current and future nuclear data needs and will be em- ployed in nuclear reactor, nuclear security and stockpile stewardship simulations with ASC codes. This database is currently the most complete nuclear database for Monte Carlo and deterministic transport of neutrons and charged particles. This library was assembled with strong support from the ASC PEM and Attribution programs, leveraged with support from Campaign 4 and the DOE/O ce of Science's US Nuclear Data Program. This document lists the revisions made in ENDL2011.2 compared with the data existing in the original ENDL2011.0 release and the ENDL2011.1-rc4 re- lease candidate of April 2015. These changes are made in parallel with some similar revisions for ENDL2009.2.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

DOE OSTI2018

SIERRA Multimechanics Module: Aria Thermal Theory Manual - Version 4.50.

This document describes the theoretical foundation of thermal analysis in Sierra Mechanics. The SIERRA Multimechanics Module: Aria, henceforth referred to as Aria for brevity, was developed at Sandia National Laboratories under the ASC program, and approximates linear and nonlinear continuum models of heat transfer. Aria uses the SIERRA Framework, which provides data management services commonly required by computational mechanics software, and facilitates the development of coupled, multi-mechanics applications for massively parallel computers. The mathematical models in Aria are based heavily on those of COYOTE, a well-established thermal analysis program that was also developed at Sandia and its ASC code predecessor, Calore. Aria, Calore and COYOTE share a significant body of numerical methods, which are described in detail by Reddy and Gartling. Throughout this document, the terms software and implementation are synonymous with the Aria thermal-fluid analysis computer program. Whether one uses Aria to perform heat transfer analysis, or in developing a new capability for the Aria application, this document provides the information needed understand the existing numerical algorithm implementations. Justification for the fundamental assumptions of heat transfer, nor derivation of the energy conservation equations are included in this document. For a more thorough theoretical background, one is referred to one of the many available textbooks, e.g. Another reference, which is freely available in downloadable electronic form, is Lienhard and Lienhard.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2018

SIERRA Multimechanics Module: Aria Thermal Theory Manual - Version 4.48

This document describes the theoretical foundation of thermal analysis in Sierra Mechanics. The SIERRA Multimechanics Module: Aria, henceforth referred to as Aria for brevity, was developed at Sandia National Laboratories under the ASC program, and approximates linear and nonlinear continuum models of heat transfer. Aria uses the SIERRA Framework, which provides data management services commonly required by computational mechanics software, and facilitates the development of coupled, multi-mechanics applications for massively parallel computers. The mathematical models in Aria are based heavily on those of COYOTE, a well-established thermal analysis program that was also developed at Sandia and its ASC code predecessor, Calore. Aria, Calore and COYOTE share a significant body of numerical methods, which are described in detail by Reddy and Gartling. Throughout this document, the terms software and implementation are syn onymous with the Aria thermal-fluid analysis computer program. Whether one uses Aria to perform heat transfer analysis, or in developing a new capability for the Aria application, this document provides the information needed understand the existing numerical algorithm implementations. Justification for the fundamental assumptions of heat transfer, nor derivation of the energy conservation equations are included in this document. For a more thorough theoretical background, one is referred to one of the many available textbooks, e.g. Another reference, which is freely available in downloadable electronic form, is Lienhard and Lienhard.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

DOE OSTI2017

SIERRA Multimechanics Module: Aria Thermal Theory Manual (Version 4.46)

This document describes the theoretical foundation of thermal analysis in Sierra Mechanics. The SIERRA Multimechanics Module: Aria, henceforth referred to as Aria for brevity, was developed at Sandia National Laboratories under the ASC program, and approximates linear and nonlinear continuum models of heat transfer. Aria uses the SIERRA Framework, which provides data management services commonly required by computational mechanics software, and facilitates the development of coupled, multi-mechanics applications for massively parallel computers. The mathematical models in Aria are based heavily on those of COYOTE, a well-established thermal analysis program that was also developed at Sandia and its ASC code predecessor, Calore. Aria, Calore and COYOTE share a significant body of numerical methods, which are described in detail by Reddy and Gartling. Throughout this document, the terms software and implementation are synonymous with the Aria thermal-fluid analysis computer program.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2017

SIERRA Multimechanics Module: Aria Thermal Theory Manual (Version 4.44)

This document describes the theoretical foundation of thermal analysis in Sierra Mechanics. The SIERRA Multimechanics Module: Aria, henceforth referred to as Aria for brevity, was developed at Sandia National Laboratories under the ASC program, and approximates linear and nonlinear continuum models of heat transfer. Aria uses the SIERRA Framework, which provides data management services commonly required by computational mechanics software, and facilitates the development of coupled, multi-mechanics applications for massively parallel computers. The mathematical models in Aria are based heavily on those of COYOTE, a well-established thermal analysis program that was also developed at Sandia and its ASC code predecessor, Calore. Aria, Calore and COYOTE share a significant body of numerical methods, which are described in detail by Reddy and Gartling. Throughout this document, the terms software and implementation are synonymous with the Aria thermal-fluid analysis computer program.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2016

SIERRA Multimechanics Module: Aria Thermal Theory Manual (Version 4.42)

This document describes the theoretical foundation of thermal analysis in Sierra Mechanics. The SIERRA Multimechanics Module: Aria, henceforth referred to as Aria for brevity, was developed at Sandia National Laboratories under the ASC program, and approximates linear and nonlinear continuum models of heat transfer. Aria uses the SIERRA Framework, which provides data management services commonly required by computational mechanics software, and facilitates the development of coupled, multi-mechanics applications for massively parallel computers. The mathematical models in Aria are based heavily on those of COYOTE, a well-established thermal analysis program that was also developed at Sandia and its ASC code predecessor, Calore. Aria, Calore and COYOTE share a significant body of numerical methods, which are described in detail by Reddy and Gartling. Throughout this document, the terms software and implementation are synonymous with the Aria thermal-fluid analysis computer program.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2024

Novel Full-Ceramic Multi-Tubular Membrane Systems for Pre-Combustion CO2 Capture with Simultaneous H2 Production: Fabrication, Performance Testing, and 3D CFD Modeling

Inorganic membranes show promise for application in pre-combustion CO2 capture with simultaneous H2 production. State-of-the-art systems for use under high temperature and pressure conditions consist of multiple membrane tube bundles prepared in a "candle-filter" configuration, in which the membrane tubes are open at one end and sealed at the other. This configuration is used for practical reasons, specifically the need to minimize potential problems due to thermal expansion mismatch, at high temperatures, between the ceramic tube bundle and the steel housing. The primary technical problem with the candle-filter configuration for use in commercial-scale installations is the inability to purge the permeate side (typically the tube side), a feature that is crucial for high H2 recovery. In this study, we fabricated dual-end open, commercial-size ceramic multiple-tube bundles made of zeolite, palladium (Pd), and carbon molecular sieve (CMS) membranes that enable permeate-side (tube-side) purge for gas separation applications. Experimental gas separation data with these membrane bundles under harsh operating conditions (temperatures up to 350 and pressures up to 800 psig), to be presented at the meeting, manifest excellent performance. Parallel to the membrane bundle construction and testing efforts, we have also developed a detailed 3D CFD modeling package using COMSOL Multiphysics software to gain more insight into the effect on the H2 purity and recovery of the detailed geometry of the multi-tubular membrane system, including the number of tubes used, their dimensions, and placement in the bundle, as well as the number, type, and positioning of internal baffles and other flow-enhancement accessories. The CFD package is validated with experimental data from different systems (1-tube, 3-tube, and 19-tube bundles), and shows high accuracy in predicting the experimental results (<5 % error in all cases). The results of our study show that the detailed internal geometry of these multi-tubular membrane systems has a considerable impact on the performance of the system as the flow maldistribution within the shell-side can substantially decrease (>40%) the H2 recovery.

20 FOSSIL-FUELED POWER PLANTS↗

DOE OSTI2019

Using Single-Molecule Chemo-Mechanical Unfolding to Simultaneously Probe Multiple Structural Parameters in Protein Folding

While single-molecule force spectroscopy has greatly advanced the study of protein folding, there are limitations to what can be learned from studying the effect of force alone. We developed a novel technique, chemo-mechanical unfolding, that combines multiple perturbants—force and chemical denaturant—to more fully characterize the folding process by simultaneously probing multiple structural parameters—the change in end-to-end distance, and solvent accessible surface area. Here, we describe the theoretical background, experimental design, and data analysis for chemo-mechanical unfolding experiments probing protein folding thermodynamics and kinetics. This technique has been applied to characterize parallel protein folding pathways, the protein denatured state, protein folding on the ribosome, and protein folding intermediates.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2022

Galaxy Alignments with Surrounding Structure in the Sloan Digital Sky Survey

Using data from the Sloan Digital Sky Survey Legacy Survey, we study the alignment of luminous galaxies with spectroscopic data with the surrounding larger-scale structure as defined by galaxies with only photometric data. We find that galaxies from the red sequence have a statistically significant tendency for their apparent long axes to align parallel to the projected surrounding structure. Red galaxies more luminous than the median of our sample (M r < –21.78) have a mean alignment angle $\langle$Φ$\rangle$ < 45°, indicating preferred parallel alignment, at a significance level >4.5σ on projected scales 0.1 Mpc < r p ≤ 7.5 Mpc. Fainter red galaxies have $\langle$Φ$\rangle$ < 45° at a significance level >4.3σ at scales 1 Mpc < r p < 3 Mpc. At a projected scale r p = 3.0 Mpc, the mean alignment angle decreases steadily with increasing luminosity for red galaxies with M r ≲ –22.5, reaching $\langle$Φ$\rangle$ = 40$^{°}_{.}$49 ± 0$^{°}_{.}$56 for the most luminous 1% (M r ~ –23.57). Galaxies from the blue sequence show no statistically significant tendency for their axes to align with larger-scale structure, regardless of galaxy luminosity. Galaxies in higher-density regions do not show a statistically significant difference in the mean alignment angle from galaxies in lower-density regions; this holds true for the faint blue, luminous blue, faint red, and luminous red subsets.

79 ASTRONOMY AND ASTROPHYSICS↗