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DOE OSTI2023

Phase-resolved terahertz nanoimaging of W Te 2 microcrystals

The terahertz (THz) electrodynamics of few-layer W⁢Te 2 is dominated by the plasmon response. However, THz surface plasmons (SPs) with long wavelengths in two-dimensional exfoliated crystals are typically confined by the lateral geometry. Direct visualization of the plasmonic standing wave patterns is challenging due to the spatial confinement and low quality factor of the SP, especially for samples that are only a few monolayers thick. Here, we resolve subtle real-space features of the plasmonic response of W⁢Te 2 by augmenting more common scattering amplitude experiments with the phase contrast accomplished within the time-domain version of THz nanoimaging. Amplitude and phase images allow us to quantitatively evaluate the evolution of the plasmonic response at cryogenic temperatures in samples with variable thickness from 3 to 12 monolayers. Further, the proposed imaging modality is universally applicable to the THz near-field nanoscopy of low-dimensional materials.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

DOE OSTI2024

A Science Gateway for the Repeatable Analysis of Machine Learning Predicted Gravity Anomalies

In recent years, deep learning has become an increasingly popular alternative for modeling in geoscience applications due to its scalability and efficiency. However, the interpretability, compute, data volume, and hyperparameter tuning requirements of deep learning models make development and monitoring difficult. Furthermore, model explainability and communicating results obtained by these models to users or domain experts is a challenge, as domain experts in geoscience also need to have a deep understanding of how those models function in order to support their scientific works. Here, we describe a science gateway and machine learning pipeline for predicting gravity anomalies from geophysical data. The gateway, built on open-source technologies, provides a holistic view of the pipeline through interactive visualizations aimed at enabling efficient exploratory data analysis. The repeatability, reproducibility, and monitoring capabilities of this overall system allow us to iterate and analyze at scale. Using this pipeline and gateway, we can repeatedly produce accurate high-resolution gravity anomaly datasets. By describing the underlying technologies, implementation, and results, here we provide a foundation for the broader adoption of science gateways into cross-cutting geoscience and machine learning research projects as a means to improve the scientific discovery and collaboration in the geophysics and computational sciences community.

58 GEOSCIENCES↗

DOE OSTI2021

Gravitation and Mesh Adaption

The Gravitation and Mesh Adaptation (GaMA) toolbox consists of a set of Matlab classes for modeling the environment around asteroids and comets. A variety of gravitational models and supporting algorithms from are consolidated alongside a custom meshing utility tailored for the application. This allows the user to work within a single streamlined environment to import and manipulate surface definitions, probe the dynamical environment, integrate trajectories, and post-process results. For other applications, modified surface meshes can be exported. Gravity Models: 1) Werner's analytic polyhedron model 2) Mascon model 3) Gottlieb's spherical harmonic model 4) Approximate polyhedron models 5) Curvilinear surface models 6) Custom composite models Meshing Features: 1) Array-based half-edge data structure 2) Supports curvilinear surface definitions up to degree 4 3) Ray-tracing 4) Coarsening 5) Feature-based refinement 6) Projection 7) Smoothing 8) Mesh quality validity tests 9) Mesh repair Additional Features: 1) Solar radiation pressure model 2) Distant 3rd body model 3) Collision detection 4) Trajectory integration and post-processing 5) Visualization of surface fields

Pearl, Jason↗

DOE OSTI2016

Nondestructive Examination Guidance for Dry Storage Casks

In this report, an assessment of NDE methods is performed for components of NUHOMS 80 and 102 dry storage system components in an effort to assist NRC staff with review of license renewal applications. The report considers concrete components associated with the horizontal storage modules (HSMs) as well as metal components in the HSMs. In addition, the report considers the dry shielded canister (DSC). Scope is limited to NDE methods that are considered most likely to be proposed by licensees. The document, ACI 349.3R, Evaluation of Existing Nuclear Safety-Related Concrete Structures, is used as the basis for the majority of the NDE methods summarized for inspecting HSM concrete components. Two other documents, ACI 228.2R, Nondestructive Test Methods for Evaluation of Concrete in Structures, and ORNL/TM-2007/191, Inspection of Nuclear Power Plant Structure--Overview of Methods and Related Application, supplement the list with additional technologies that are considered applicable. For the canister, the ASME B&PV Code is used as the basis for NDE methods considered, along with currently funded efforts through industry (Electric Power Research Institute [EPRI]) and the U.S. Department of Energy (DOE) to develop inspection technologies for canisters. The report provides a description of HSM and DSC components with a focus on those aspects of design considered relevant to inspection. This is followed by a brief description of other concrete structural components such as bridge decks, dams, and reactor containment structures in an effort to facilitate comparison between these structures and HSM concrete components and infer which NDE methods may work best for certain HSM concrete components based on experience with these other structures. Brief overviews of the NDE methods are provided with a focus on issues and influencing factors that may impact implementation or performance. An analysis is performed to determine which NDE methods are most applicable to specific components.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

DOE OSTI2018

Augmented Reality Tools for Nuclear Facilities - 18318

In this work we explore the possibility of improving nuclear facility operations through the use of emerging augmented reality technology. Specifically we focus on the use of augmented reality headsets. Augmented reality opens up the possibility for easy, on-the-fly access to documentation related to canisters, rooms, and carts. It also can be used to help plan complicated material moves in ways that do not violate nuclear criticality safety regulations. Modern augmented reality technology can also be interacted with using gaze, gesture and voice commands, thus making it particularly attractive for facilitating the documentation of nuclear material operations and work verification. An augmented reality-based nuclear facility criticality safety system would have a number of benefits for operations in nuclear facilities. This work could be used across the DOE complex to ensure technicians in gloveboxes work safely and securely. It could greatly reduce downtime associated with administrative criticality incidents. It would be a step forward in the process of improving the quality of documentation of the work that occurs in nuclear facilities while simultaneously increasing the ease with which this documentation can be collected. The augmented reality effectively endows the glovebox technicians with a sense for administrative nuclear criticality safety and the reactivity changes caused directly by their actions. Augmented reality also has great potential for facilitating inspections of nuclear infrastructure. Examples of Augmented Reality applications that facilitate infrastructure inspection and work verification will also be presented. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

DOE OSTI2018

Visualization of the High-Burnup Spent Fuel Rod Phase 1 Test Plan: Technical Memo - Spent Fuel and Waste Disposition (Technical Memo)

Twenty-five high-burnup fuel rods were extracted from seven different fuel assemblies used for power production at the North Anna nuclear power plant and shipped to Oak Ridge National Laboratory (ORNL) in 2016 for detailed non-destructive examination (NDE) and destructive examination (DE). The spent fuel rods were from 17×17 lattices and consist of four cladding types—Zirlo ® , M5 ® , Zircaloy-4, and low tin Zircaloy-4 (Zirc-4). These spent fuel rods are being tested to provide: (a) baseline characterization and mechanical property data that can be used as a comparison to fuel that was loaded into a modified TN-32B cask in November 2017, as part of the high-burnup confirmatory data project and (b) data applicable to high-burnup fuel rods (>45 GWd/MTU) currently stored and to be stored in the dry-cask fleet. The TN-32B cask is referred to as the “Demo” cask and is currently expected to be transported to a separate location and the internal contents inspected in approximately ten years. ORNL has completed the NDE of the twenty-five fuel rods. The purpose of this technical memorandum is to present a simplified summary of the first phase of destructive examinations and test conditions that will be used for communicating with various stakeholders. The destructive examinations will leverage the expertise and capabilities from multiple national laboratories for performing independent measurements of relevant data. Close coordination is required to ensure that all examinations follow well documented procedures and are performed so that measured data and characteristics can be readily compared. Pacific Northwest National Laboratory (PNNL) has published a detailed overview of the test program. ORNL and PNNL developed detailed draft test plans for testing to be performed at their facilities. ORNL and PNNL are in the process of refining these test plans to apply specifically to the testing described in this memorandum. Argonne National Laboratory (ANL) contributed to the ORNL test plan by describing tests to be conducted at ANL. Testing will be based on continuous learning. If a test produces results that are inconsistent with expectations or current trends, further testing will be paused until a path forward is established to understand the results and to identify follow-on testing.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

DOE OSTI2017

Morse-Smale Analysis of Ion Diffusion in Ab Initio Battery Materials Simulations

Ab initio molecular dynamics (AIMD) simulations are increasingly useful in modeling, optimizing and synthesizing materials in energy sciences. In solving Schrödinger’s equation, they generate the electronic structure of the simulated atoms as a scalar field. However, methods for analyzing these volume data are not yet common in molecular visualization. The Morse-Smale complex is a proven, versatile tool for topological analysis of scalar fields. In this paper, we apply the discrete Morse-Smale complex to analysis of first-principles battery materials simulations. We consider a carbon nanosphere structure used in battery materials research, and employ Morse-Smale decomposition to determine the possible lithium ion diffusion paths within that structure. Our approach is novel in that it uses the wavefunction itself as opposed distance fields, and that we analyze the 1-skeleton of the Morse-Smale complex to reconstruct our diffusion paths. Furthermore, it is the first application where specific motifs in the graph structure of the complete 1-skeleton define features, namely carbon rings with specific valence. We compare our analysis of DFT data with that of a distance field approximation, and discuss implications on larger classical molecular dynamics simulations.

25 ENERGY STORAGE↗

DOE OSTI2020

Unsaturated and Saturated Hydraulic Parameters of Soils at the East River Watershed, Colorado Calculated using the Pedotransfer Function Method.

The purpose of the data package is to present the results of calculations of the following unsaturated-saturated hydraulic parameters of soils of the East River Watershed, Colorado: fully saturated water content (Qs), residual saturation (Qr), van genuchten parameters alpha and n, field capacity (FC), and saturated hydraulic conductivity (Ks). Calculations were conducted for the following soil texture types: sandy_loam, loam, silty_clay_loam, clay_loam, silt loam; the particle size distribution included the percentage of sand, silt, clay, and the bulk density (BD) of soils. Calculations were conducted for the following areas- Lower_Subalpine (6 samples),- Lower_Montane_lower_hillslope (7 samples),- Floodplain_at_base_of_lower_montane_hillslope, (11 samples),- PLM-0 (10 samples),- PLM-1 (10 samples), and - PLM-3 (13 samples)Calculations were conducted using the Pedotransfer Function Method developed by Tóth et al. (2014) with the application of the code ”euptf” in Rstudio. The data are being summarized in the Excel file ”Unsaturated_Saturated_Hydraulic_Parameters_PTF_calculated_EASt_EIver.xls" including two worksheets:“full_data_EAST_RIVER” which includes (a) the input data used for calculations, the soil texture triangle, and the plots of the water retention curves and unsaturated hydraulic conductivity for several types of soil texture, and (b) the summary table with the averaged parameters for each area. The the texture triangle was plotted using the Rstudio "soiltexture." Microsoft Excel software is required to open the Excel file. The metadata and a list of references to the Rstudio libraries used for calculations and data visualization are giving in the Word Readme file.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2019

Biomolecular Solvation Structure Revealed by Molecular Dynamics Simulations

To compare ordered water positions from experiment with those from molecular dynamics (MD) simulations, a number of MD models of water structure in crystalline endoglucanase were calculated. The starting MD model was derived from a joint X-ray and neutron diffraction crystal structure, enabling the use of experimentally assigned protonation states. Simulations were performed in the crystalline state, using a periodic 2 × 2 × 2 supercell with explicit solvent. Water X-ray and neutron scattering density maps were computed from MD trajectories using standard macromolecular crystallography methods. In one set of simulations, harmonic restraints were applied to bias the protein structure toward the crystal structure. For these simulations, the recall of crystallographic waters using strong peaks in the MD water electron density was very good, and there also was substantial visual agreement between the boomerang-like wings of the neutron scattering density and the crystalline water hydrogen positions. An unrestrained simulation also was performed. For this simulation, the recall of crystallographic waters was much lower. For both restrained and unrestrained simulations, the strongest water density peaks were associated with crystallographic waters. Overall, the results demonstrate that it is now possible to recover crystallographic water structure using restrained MD simulations but that it is not yet reasonable to expect unrestrained MD simulations to do the same. Further development and generalization of MD water models for force-field development, macromolecular crystallography, and medicinal chemistry applications is now warranted. In particular, the combination of room-temperature crystallography, neutron diffraction, and crystalline MD simulations promises to substantially advance modeling of biomolecular solvation.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2019

Engineering the hCRBPII Domain-Swapped Dimer into a New Class of Protein Switches

Protein conformational switches or allosteric proteins play a key role in the regulation of many essential biological pathways. Nonetheless, the implementation of protein conformational switches in protein design applications has proven challenging, with only a few known examples that are not derivatives of naturally occurring allosteric systems. In this work, we have discovered that the domain-swapped (DS) dimer of hCRBPII undergoes a large and robust conformational change upon retinal binding, making it a potentially powerful template for the design of protein conformational switches. Atomic resolution structures of the apo- and holo-forms illuminate a simple, mechanical movement involving sterically driven torsion angle flipping of two residues that drive the motion. We further demonstrate that the conformational “readout” can be altered by addition of cross-domain disulfide bonds, also visualized at atomic resolution. Finally, as a proof of principle, we have created an allosteric metal binding site in the DS dimer, where ligand binding results in a reversible 5-fold loss of metal binding affinity. The high resolution structure of the metal-bound variant illustrates a well-formed metal binding site at the interface of the two domains of the DS dimer and confirms the design strategy for allosteric regulation.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2014

Breast tumor segmentation in high resolution x-ray phase contrast analyzer based computed tomography

Purpose: Phase contrast computed tomography has emerged as an imaging method, which is able to outperform present day clinical mammography in breast tumor visualization while maintaining an equivalent average dose. To this day, no segmentation technique takes into account the specificity of the phase contrast signal. In this study, the authors propose a new mathematical framework for human-guided breast tumor segmentation. This method has been applied to high-resolution images of excised human organs, each of several gigabytes. Methods: The authors present a segmentation procedure based on the viscous watershed transform and demonstrate the efficacy of this method on analyzer based phase contrast images. The segmentation of tumors inside two full human breasts is then shown as an example of this procedure’s possible applications. Results: A correct and precise identification of the tumor boundaries was obtained and confirmed by manual contouring performed independently by four experienced radiologists. Conclusions: The authors demonstrate that applying the watershed viscous transform allows them to perform the segmentation of tumors in high-resolution x-ray analyzer based phase contrast breast computed tomography images. Combining the additional information provided by the segmentation procedure with the already high definition of morphological details and tissue boundaries offered by phase contrast imaging techniques, will represent a valuable multistep procedure to be used in future medical diagnostic applications.

60 APPLIED LIFE SCIENCES↗

DOE OSTI2022

AOI.1 Application of Artificial Intelligence techniques enabling coal fired power plants the ability to achieve higher efficiency, improved availability, and increased reliability of their operations (Final Report)

During this effort, SparkCognition with support from the Electric Power Research Institute (EPRI) was tasked with applying artificial intelligence (AI) to improve the reliability, efficiency, and safety of operations at a coal-fired plant. By implementing AI techniques, like machine learning (ML), it is believed that operators can leverage existing data sources to gain more insights such as advanced warning of machine degradation. With enough lead time, a reliability engineer can take action to minimize, or even avoid, impact to production. To complete this work effort, SparkCognition developed and refined an ML-based model using sensor data for a Steam Turbine unit at a host site. The models were deployed in an online, web-based solution that allows users to visualize model outputs and supporting data. The final solution, based on SparkCognition’s proprietary software platform called SparkPredict®, was shared with EPRI who completed an online evaluation of results to determine the solution’s ability to detect actionable events.

20 FOSSIL-FUELED POWER PLANTS↗

DOE OSTI2018

A Metallurgical Investigation of the Direct Energy Deposition Surface Repair of Ferrous Alloys

Among additive manufacturing (AM) processes, the direct energy deposition (DED) by laser is explored to establish its applicability for the repair of ferrous alloys such as UNS G41400 low-alloy steel, UNS S41000 martensitic stainless steel, UNS S17400 precipitation-strengthened martensitic stainless steel, and UNS S32750 super-duplex stainless steel. Unlike plating, thermal spray, and conventional cladding weld, DED laser powder deposition offers potential advantages, e.g., thin deposits, limited dilutions, narrow heat-affected zones (HAZ), potentially improved surface properties. In this investigation, all AM deposits were completed with an IREPA CLAD™ system using a powder feed of UNS N06625, an alloy largely selected for its outstanding corrosion resistance. This investigation first addresses topological aspects of AM deposits (including visual imperfections) before focusing on changes in microstructure, microhardness, chemical composition across AM deposits and base materials. It has been established that dense, uniform, hard (~ 300 HVN), crack-free UNS N06625-compliant AM deposits of fine dendritic microstructures are reliably produced. However, except for the UNS S32750 steel, a significant martensitic hardening was observed in the HAZs of UNS G41400 (~ 650 HVN), UNS S41000 (~ 500 HVN), and UNS S17400 (~ 370 HVN). In summary, this investigation demonstrates that the DED laser repair of ferrous parts with UNS N06625 may restore damaged surfaces, but it also calls for cautions and complementary investigations for alloys experiencing a high HAZ hardening, for which industry standard recommendations are exceeded and lead to an increased risk of delayed cracking in corrosive environments.

36 MATERIALS SCIENCE↗

DOE OSTI2021

Automatic identification and quantification of dense microcracks in high-performance fiber-reinforced cementitious composites through deep learning-based computer vision

Highlights: • A method is presented to detect, locate, quantify, and visualize dense microcracks in HPFRCC. • Quantification of dense microcracks is realized using deep learning method for the first time. • The presented method uses deep learning models that are trained using a realistic dataset size. • The presented method has a high computation efficiency for identifying and quantifying cracks. • The presented method provides crack width with errors up to 50 μm and a R{sup 2} value of 0.984. High-performance fiber-reinforced cementitious composites (HPFRCCs) feature high mechanical strengths, crack resistance, and durability. Under excessive loading, HPFRCCs demonstrate dense microcracks that are difficult to identify using existing methods. This study presents a computer vision method for identification, quantification, and visualization of microcracks in HPFRCCs based on deep learning. The presented method integrates multiple deep learning models and computer vision techniques in a hierarchical architecture. The crack pattern (e.g., number, width, and spacing of cracks) are automatically determined from pictures without human intervention. This study shows that the presented method achieves an accuracy of 0.992 for crack detection and an accuracy finer than 50 μm (R{sup 2} > 0.984) for quantification of crack width when deep learning models are trained using only 200 pictures of HPFRCCs and 200 pictures of conventional concrete with incorporation of data augmentation. The presented method is expected to be also applicable to other materials featuring complex cracks.

36 MATERIALS SCIENCE↗

DOE OSTI2015

Evaluation of High Temperature Elastomers for Geothermal Wells

This report describes the extension of a performance screening study of elastomers for geothermal well applications. Elastomeric O-rings were subjected to compression while submerged in water at elevated temperatures and pressure to determine performance under more aggressive conditions. Following the experiment, the elastic moduli of the O-ring cross-sections were assessed for any changes which may affect O-ring function down-hole. All materials showed susceptibility to thermo-oxidative degradation at high temperatures and pressures. Type I FKM had the least amount of compression set of all materials tested at 150ºC while Kalrez FFKM O-rings had the least amount of edge hardening of all materials, regardless of aging temperature. Prior visual observation of materials aged in simulated environments revealed an unusual trend with EPDM and FEPM materials: the degradation and disintegration of these polymers in an oxidative thermal cycle environment, but the ability to maintain mechanical performance and shape during oxidative thermal cycling in the presence of steam. EPDM and FEPM were subjected to additional testing at SNL in order to better understand this aging anomaly. No abnormalities were observed in the chemical (oxidation rates, FTIR spectra, solvent uptake, gel content, and weight loss vs. temperature) or physical (modulus profiles) measurements that could explain the visually observed aging differences. SNL validated this observation through a secondary controlled aging test using only EPDM, where, once again, it was shown that thermo-oxidative conditions appear to cause more degradative damage (enhanced embrittlement) than did thermo-oxidative coupled with hydrolytic environments. From these data we conclude that water may favorably interfere with normal thermo-oxidative degradation processes via some type of inhibition pathway which has yet to be identified.

15 GEOTHERMAL ENERGY↗

DOE OSTI2024

Heuristic algorithms for design of integrated monitoring of geologic carbon storage sites

Designs for Risk Evaluation and Management (DREAM) is a tool developed under the National Risk Assessment Partnership (NRAP) to enhance geologic carbon storage safety and efficiency. Using potential leakage scenarios generated externally by the users preferred history-matching approach, DREAM constructs ideal combinations of sensor locations in the right place at the right time to detect as many leaks as possible, detect them as early as possible, and minimize cost. This user-friendly tool, developed in Java, features a window-based GUI for input and a 3D visualization tool for viewing the domain space and optimized monitoring plans. DREAM's latest version accommodates real-world usage by allowing for joint optimization of wellbore point sensor placements and surface geophysics survey geometries, and by using more efficient multi-objective optimization algorithms. We show an example where, these two improvements combined allow us to support containment assurance and go from detecting 80–90 % of the potential CO 2 leakage to +99.7 %, a step-change improvement that can make the deciding difference in whether a site is suitable for geologic carbon storage. Though developed for geologic carbon storage, this tool would be equally applicable in many surface or offshore environmental monitoring projects.

58 GEOSCIENCES↗

DOE OSTI2015

WE-D-BRD-00: New Developments in Hybrid MR-Treatment: Technology

The advantages that make MR highly desirable for in-room treatment guidance, i.e. soft-tissue visualization and physiological assessment of healthy/tumor tissues, are largely recognized in the research community. However, the MR absorption in practical clinical workflows is still hindered by lack of sufficient technological infrastructure. Recent advances have been made towards filling that gap such as the development of integrated therapy systems relying on an MR scanner and a radiation source (linac, Co-60) and/or brachytherapy. The session is intended to present new efforts and methods aimed at facilitating the adoption of MR guidance for treatment delivery. Specifically, the discussion will focus on a) linac designs for reduced footprint and seamless integration with MR/linac systems, b) tracking coils for brachytherapy applications, and c) procedures for the commissioning and monitoring of MR and MR/linac performance. Learning Objectives: Understand limitations and proposed solutions for linac designs and associated integration with MR/linac systems; Understand current issues with MR-guided brachytherapy procedures Understand the issues and needs for new MR commissioning and QC. License agreement with Modus Medical Devices to develop a phantom for the quantification of MR image distortions.

60 APPLIED LIFE SCIENCES↗

DOE OSTI2015

WE-D-BRD-01: New Linac Designs for MR-Guided Therapy Systems

60 APPLIED LIFE SCIENCES↗