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At least 1,405 records · Page 78

Electron distribution functions in solar flares from combined X-ray and extreme-ultraviolet observations

Simultaneous solar flare observations with SDO and RHESSI provide spatially resolved information about hot plasma and energetic particles in flares. RHESSI allows the properties of both hot (≳8 MK) thermal plasma and non-thermal electron distributions to be inferred, while SDO/AIA is more sensitive to lower temperatures. We present and implement a new method to reconstruct electron distribution functions from SDO/AIA data. The combined analysis of RHESSI and AIA data allows the electron distribution function to be inferred over the broad energy range from 0.1 keV up to a few tens of keV. The analysis of two well-observed flares suggests that the distributions in general agree to within a factor of three when the RHESSI values are extrapolated into the intermediate range 1-3 keV, with AIA systematically predicting lower electron fluxes. Possible instrumental and numerical effects, as well as potential physical origins for this discrepancy, are discussed. The inferred electron distribution functions in general show one or two nearly Maxwellian components at energies below ∼15 keV and a non-thermal tail above.

79 ASTRONOMY AND ASTROPHYSICS↗

Array magnetics modal analysis for the DIII-D tokamak based on localized time-series modelling

Here, time-series analysis of magnetics data in tokamaks is typically done using block-based fast Fourier transform methods. This work presents the development and deployment of a new set of algorithms for magnetic probe array analysis. The method is based on an estimation technique known as stochastic subspace identification (SSI). Compared with the standard coherence approach or the direct singular value decomposition approach, the new technique exhibits several beneficial properties. For example, the SSI method does not require that frequencies are orthogonal with respect to the timeframe used in the analysis. Frequencies are obtained directly as parameters of localized time-series models. The parameters are extracted by solving small-scale eigenvalue problems. Applications include maximum-likelihood regularized eigenmode pattern estimation, detection of neoclassical tearing modes, including locked mode precursors, and automatic clustering of modes, and magnetics-pattern characterization of sawtooth pre- and postcursors, edge harmonic oscillations and fishbones.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

An integrated study of thermal treatment effects on the microstructure and magnetic properties of Zn-ferrite nanoparticles

The evolution of the magnetic state, crystal structure and microstructure parameters of nanocrystalline zinc–ferrite, tuned by thermal annealing of ~4 nm nanoparticles, was systematically studied by complementary characterization methods. Structural analysis of neutron and synchrotron x-ray radiation data revealed a mixed cation distribution in the nanoparticle samples, with the degree of inversion systematically decreasing from 0.25 in an as-prepared nanocrystalline sample to a non-inverted spinel structure with a normal cation distribution in the bulk counterpart. The results of DC magnetization and Mossbauer spectroscopy experiments indicated a superparamagnetic relaxation in ~4 nm nanoparticles, albeit with different freezing temperatures T f of 27.5 K and 46 K, respectively. The quadrupole splitting parameter decreases with the annealing temperature due to cation redistribution between the tetrahedral and octahedral sites of the spinel structure and the associated defects. DC magnetization measurements indicated the existence of significant interparticle interactions among nanoparticles (‘superspins’). Additional confirmation for the presence of interparticle interactions was found from the fit of the T f (H) dependence to the AT line, from which a value of the anisotropy constant of K eff = 5.6 × 10 5 erg cm -3 was deduced. Further evidence for strong interparticle interactions was found from AC susceptibility measurements, where the frequency dependence of the freezing temperature T f (ƒ) was satisfactory described by both Vogel–Fulcher and dynamic scaling theory, both applicable for interacting systems. The parameters obtained from these fits suggest collective freezing of magnetic moments at T f .

Antic, Bratislav↗

Measurement of off-shell Higgs boson production in the $H^*\rightarrow ZZ\rightarrow 4\ell$ decay channel using a neural simulation-based inference technique in 13 TeV pp collisions with the ATLAS detector

A measurement of off-shell Higgs boson production in the $H^*\to ZZ\to 4\ell$ decay channel is presented. The measurement uses 140 fb −1 of proton–proton collisions at $\sqrt{s} = 13$ TeV collected by the ATLAS detector at the Large Hadron Collider and supersedes the previous result in this decay channel using the same dataset. The data analysis is performed using a neural simulation-based inference method, which builds per-event likelihood ratios using neural networks. The observed (expected) off-shell Higgs boson production signal strength in the $ZZ\to 4\ell$ decay channel at 68% CL is $0.87^{+0.75}_{-0.54}$ ($1.00^{+1.04}_{-0.95}$ ). The evidence for off-shell Higgs boson production using the $ZZ\to 4\ell$ decay channel has an observed (expected) significance of 2.5σ (1.3σ). The expected result represents a significant improvement relative to that of the previous analysis of the same dataset, which obtained an expected significance of 0.5σ. When combined with the most recent ATLAS measurement in the $ZZ\to 2\ell 2\nu$ decay channel, the evidence for off-shell Higgs boson production has an observed (expected) significance of 3.7σ (2.4σ). The off-shell measurements are combined with the measurement of on-shell Higgs boson production to obtain constraints on the Higgs boson total width. The observed (expected) value of the Higgs boson width at 68% CL is $4.3^{+2.7}_{-1.9}$ ($4.1^{+3.5}_{-3.4}$ ) MeV.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Prototype acoustic positioning system for the Pacific Ocean Neutrino Experiment

We present the design and initial performance characterization of the prototype acoustic positioning system intended for the Pacific Ocean Neutrino Experiment. It comprises novel piezo-acoustic receivers with dedicated filtering- and amplification electronics installed in P-ONE instruments and is complemented by a commercial system comprised of cabled and autonomous acoustic pingers for sub-sea installation manufactured by Sonardyne Ltd. We performed an in-depth characterization of the acoustic receiver electronics and their acoustic sensitivity when integrated into P-ONE pressure housings. These show absolute sensitivities of up to -125 dB re V2/μPa2 in a frequency range of 10–40 kHz. We furthermore conducted a positioning measurement campaign in the ocean by deploying three autonomous acoustic pingers on the seafloor, as well as a cabled acoustic interrogator and a P-ONE prototype module deployed from a ship. Using a simple peak-finding detection algorithm, we observe high accuracy in the tracking of relative ranging times at approximately 230–280 μs at distances of up to 1600 m, which is sufficient for positioning detectors in a cubic-kilometer detector and which can be further improved with more involved detection algorithms. The tracking accuracy is further confirmed by independent ranging of the Sonardyne system and closely follows the ship's drift in the wind measured by GPS. The absolute positioning shows the same tracking accuracy with its absolute precision only limited by the large uncertainties of the deployed pinger positions on the seafloor.

Data analysis↗

Modern Senicide in the Face of a Pandemic: An Examination of Public Discourse and Sentiment About Older Adults and COVID-19 Using Machine Learning

Objectives This study examined public discourse and sentiment regarding older adults and COVID-19 on social media and assessed the extent of ageism in public discourse. Methods Twitter data (N = 82,893) related to both older adults and COVID-19 and dated from January 23 to May 20, 2020, were analyzed. We used a combination of data science methods (including supervised machine learning, topic modeling, and sentiment analysis), qualitative thematic analysis, and conventional statistics. Results The most common category in the coded tweets was “personal opinions” (66.2%), followed by “informative” (24.7%), “jokes/ridicule” (4.8%), and “personal experiences” (4.3%). The daily average of ageist content was 18%, with the highest of 52.8% on March 11, 2020. Specifically, more than 1 in 10 (11.5%) tweets implied that the life of older adults is less valuable or downplayed the pandemic because it mostly harms older adults. A small proportion (4.6%) explicitly supported the idea of just isolating older adults. Almost three-quarters (72.9%) within “jokes/ridicule” targeted older adults, half of which were “death jokes.” Also, 14 themes were extracted, such as perceptions of lockdown and risk. A bivariate Granger causality test suggested that informative tweets regarding at-risk populations increased the prevalence of tweets that downplayed the pandemic. Discussion Ageist content in the context of COVID-19 was prevalent on Twitter. Information about COVID-19 on Twitter influenced public perceptions of risk and acceptable ways of controlling the pandemic. Finaly, public education on the risk of severe illness is needed to correct misperceptions.

60 APPLIED LIFE SCIENCES↗

Learning nuclear cross sections across the chart of nuclides with graph neural networks

We explore the use of deep learning techniques to learn how nuclear cross sections change as we add or remove protons and neutrons. As a proof of principle, we focus on the neutron-induced reactions in the fast energy regime. Our approach follows a two-stage learning framework. First, we apply representation learning to encode cross section data into a latent space using either variational autoencoders (VAEs) or implicit neural representations (INRs). Then, we train graph neural networks (GNNs) on the resulting embeddings to predict missing values across the nuclear chart by leveraging the topological structure of neighboring isotopes. We demonstrate accurate cross section predictions within a 9 × 9 block of missing nuclei. We also find that the optimal GNN training strategy depends on the type of latent representation used, with VAE embeddings performing best under end-to-end optimization in the original space, while INR embeddings achieve better results when the GNN is trained only in the latent space. Furthermore, using clustering algorithms, we map groups of latent vectors into regions of the nuclear chart and show that VAEs and INRs can discover some of the neutron magic numbers. These findings suggest that deep-learning models based on the representation encoding of cross sections combined with graph neural networks hold significant potential in augmenting nuclear theory models, e.g., by providing reliable estimates of covariances of cross sections, including cross-material covariances.

Machine learning↗

Cross sections for the formation of Rb84m,g, Rb83, and Rb82m in Sr86(d,x) reactions up to deuteron energies of 49 MeV: Competition between α-particle and multinucleon emission processes

Cross sections of Sr86(d,x) reactions leading to the products Rb84m,g, Rb83, and Rb82m were measured by the stacked-sample activation technique up to deuteron energies of 49 MeV. Nuclear model calculations were performed using the codes talys and empire, which combine the statistical, precompound, and direct interaction components. In all cases, the empire results were much higher than the talys calculation. Fairly good agreement was obtained between measured data and the talys calculation after some optimization of the input model parameters. Insight into competition between α-particle and multinucleon emission in the Y88 compound-nucleus system was also gained.

59 ≤ A ≤ 89↗

On the release of cppxfel for processing X-ray free-electron laser images

As serial femtosecond crystallography expands towards a variety of delivery methods, including chip-based methods, and smaller collected data sets, the requirement to optimize the data analysis to produce maximum structure quality is becoming increasingly pressing. Here cppxfel , a software package primarily written in C++, which showcases several data analysis techniques, is released. This software package presently indexes images using DIALS (diffraction integration for advanced light sources) and performs an initial orientation matrix refinement, followed by post-refinement of individual images against a reference data set. Cppxfel is released with the hope that the unique and useful elements of this package can be repurposed for existing software packages. However, as released, it produces high-quality crystal structures and is therefore likely to be also useful to experienced users of X-ray free-electron laser (XFEL) software who wish to maximize the information extracted from a limited number of XFEL images.

97 MATHEMATICS AND COMPUTING↗

CERES : a cryo-EM re-refinement system for continuous improvement of deposited models

The field of electron cryomicroscopy (cryo-EM) has advanced quickly in recent years as the result of numerous technological and methodological developments. This has led to an increase in the number of atomic structures determined using this method. Recently, several tools for the analysis of cryo-EM data and models have been developed within the Phenix software package, such as phenix.real_space_refine for the refinement of atomic models against real-space maps. Also, new validation metrics have been developed for low-resolution cryo-EM models. To understand the quality of deposited cryo-EM structures and how they might be improved, models deposited in the Protein Data Bank that have map resolutions of better than 5 Å were automatically re-refined using current versions of Phenix tools. The results are available on a publicly accessible web page (https://cci.lbl.gov/ceres). The implementation of a Cryo-EM Re-refinement System ( CERES ) for the improvement of models deposited in the wwPDB, and the results of the re-refinements, are described. Based on these results, contents are proposed for a `cryo-EM Table 1', which summarizes experimental details and validation metrics in a similar way to `Table 1' in crystallography. The consistent use of robust metrics for the evaluation of cryo-EM models and data should accompany every structure deposition and be reported in scientific publications.

59 BASIC BIOLOGICAL SCIENCES↗

Machine Learning Benchmarks for the Classification of Equivalent Circuit Models from Electrochemical Impedance Spectra

Analysis of Electrochemical Impedance Spectroscopy (EIS) data for electrochemical systems often consists of defining an Equivalent Circuit Model (ECM) using expert knowledge and then optimizing the model parameters to deconvolute various resistance, capacitive, inductive, or diffusion responses. For small data sets, this procedure can be conducted manually; however, it is not feasible to manually define a proper ECM for extensive data sets with a wide range of EIS responses. Automatic identification of an ECM would substantially accelerate the analysis of large sets of EIS data. We showcase machine learning methods to classify the ECMs of 9,300 impedance spectra provided by QuantumScape for the BatteryDEV hackathon. The best-performing approach is a gradient-boosted tree model utilizing a library to automatically generate features, followed by a random forest model using the raw spectral data. A convolutional neural network using boolean images of Nyquist representations is presented as an alternative, although it achieves a lower accuracy. We publish the data and open source the associated code. The approaches described in this article can serve as benchmarks for further studies. A key remaining challenge is the identifiability of the labels, underlined by the model performances and the comparison of misclassified spectra.

25 ENERGY STORAGE↗

Single-cell proteomics of Arabidopsis leaf mesophyll reveals dynamic protein responses to water-deficit stress

Background The application of single-cell omics tools to biological systems can provide unique insights into diverse cellular populations and their heterogeneous responses to internal and external perturbations. Thus far, most single-cell studies in plant systems have been limited to RNA-sequencing approaches, which only provide indirect readouts of cellular functions. Results Here, we present a single-cell proteomics workflow for plant cells that integrates tape-sandwich protoplasting, piezoelectric cell sorting, nanoPOTS sample preparation, and ion mobility-based MS data acquisition method for label-free single-cell proteomics analysis of Arabidopsis leaf mesophyll cells. From a single leaf protoplast, over 3,000 proteins were quantified with high precision. The workflow is demonstrated to identify stress associated changes in protein abundance by analyzing 117 protoplasts from well-watered and water-deficit stressed plants. Additionally, we describe a new approach for constructing covarying protein networks at the single-cell level and demonstrate how single-cell protein covariation analysis can reveal previously unrecognized protein functions while also capturing stress-induced changes in protein–protein dynamics. Conclusions The label-free scProteomic approach presented here represents a significant advance through the demonstration of a facile protoplast isolation method combined with deep and precise proteomic coverage of Arabidopsis leaf mesophyll cell types. We believe this study will serve as an informative reference to future plant scProteomic investigations.

Arabidopsis↗

Single-shot measurement of the nonlinear refractive index of air at 92 µm with a picosecond terawatt CO 2 laser

We developed a simple, accurate single-shot method to determine the nonlinear refractive index of air by measuring the evolution of the spatial shape of a laser beam propagating through the atmosphere. A distinctive feature of this new method, which relies on a modified Fresnel propagation model for data analysis, is the use of a hard aperture for producing a welldefined, high-quality beam from a comparatively nonuniform quasi-flat-top beam which is typical for highpeak-power lasers. The nonlinear refractive index of air for a very short (2 ps) long-wave infrared (LWIR) laser pulse was measured for the first time, yielding n 2 = 3.0 × 10 -23 m 2 /W at 9.2 µm. This result is 40% lower than a corresponding measurement with longer (200 ps) LWIR pulses at a similar wavelength.

43 PARTICLE ACCELERATORS↗

Simulation of the Charge Measurements for the SuperCDMS Soudan Experiment

Astronomical observations lead us to believe that dark matter constitutes the majority of the mass of the Universe, yet it has never been directly observed experimentally. The Super Cryogenic Dark Matter Search Experiment (SuperCDMS) aims to discover the particle nature of dark matter, by developing and using some of the most sensitive detectors ever built. The SuperCDMS detectors are capable of rejecting known particles to search for dark matter interactions, but the discrimination is a complicated analysis task. Previous analyses with SuperCDMS set world leading sensitivity limits to dark matter interactions, but the analysis techniques have not been based on simulations. Now we have developed an efficient simulations infrastructure that will help better understand the detectors, develop a better background model, and optimize the next generation dark matter searches. In this thesis we present the fully-functional simulations infrastructure to produce high quality samples a s well as results for the charge system readout simulations, and comparisons to expectations from data. We show that our simulations well-reproduce dominant features of data, bringing SuperCDMS closer to a robust simulation-based analysis method, much needed for the upcoming SuperCDMS dark matter searches.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Intrusion Detection System Alarm Station Operator Interface Improvements

To address Alarm Station operator performance, Portable Intrusion Detection System team gathered information concerning AS operator data needs when assessing alarms. The purpose was to improve the Portable Intrusion Detection System operator interface to ensure that critical information was quickly presented and easily accessible. To gather the data, the team used a Goal Directed Task Analysis approach. The method of analysis was to prepare a set of interview questions, interview selected AS operator experts, conduct the interviews, create a goal/decision/information hierarchy based on information gathered, and then apply the results to the operator interface. In applying the results, the team had to consider not only the Goal Directed Task Analysis -determined information needs of the Alarm Station operator end-user population, but also account for customer requirements and differences in domain. The constraints in implementing all situation awareness recommendations are summarized and initial potential solutions presented.

98 NUCLEAR DISARMAMENT, SAFEGUARDS, AND PHYSICAL P↗

Collaborative Research: Large Scale Intensity Mapping of Neutral Hydrogen with the Tianlai Pathfinders

This program developed new analysis methods for current and upcoming cosmological hydrogen 21cm intensity mapping data from the Tianlai experiment, located in a radio quiet area of Western China. Such mapping provides important clues to the evolution of gas and galaxies in the early universe. The experiment measured the three-dimensional large-scale structure of the universe via hydrogen emission from distant galaxies. The primary goal was to develop ways to handle the large foreground signal, which has been previously quantified in a pathfinder 21cm program conducted on NSF's Green Bank Telescope.

79 ASTRONOMY AND ASTROPHYSICS↗

First Monte Carlo Analysis on Fragmentation Functions

We present a new global QCD analysis of fragmentation functions (FF) using Monte Carlo methods. The analysis includes all existing semi-inclusive hadron production data from electron-positron annihilation experiments including the most recent measurements from Belle and BaBar. Preliminary analysis of combined FF analysis with spin dependent PDF will be shown.

Sato, Nobuo↗