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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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DOE OSTI2026

Probing Interfacial Reaction Pathways in Atomic Layer Deposition on Sulfide Superionic Conductors

Sulfide superionic conductors (e.g., argyrodite Li 6 PS 5 Cl, LPSCl) are extremely promising for all solid-state batteries, but poor atmospheric stability and high interfacial reactivity limit widespread adoption. Coating LPSCl powders with ultrathin coatings using atomic layer deposition (ALD) mitigates these problems, protecting against atmospheric degradation and reducing reactivity with Li metal, yielding more stable cycling. Despite significant promise, the ALD mechanism is unknown, hampering the development of new coating chemistries. In this study, we elucidate the mechanism for Al 2 O 3 ALD on LPSCl using trimethyl aluminum (TMA) and H 2 O by combining in situ Fourier transform infrared spectroscopy, ex situ solid-state magic angle spinning nuclear magnetic resonance, UV Raman spectroscopy, X-ray photoelectron spectroscopy, and density functional theory calculations. We determine that ALD Al 2 O 3 nucleates promptly via TMA reaction with native —OH, —SH, and PS 3 -OH groups to form transient C–Al–O(S) species that are rapidly hydrolyzed during the subsequent H 2 O exposure. This reversible transformation maintains surface nucleophilicity and prevents sulfide decomposition. The resulting layer-by-layer growth leads to highly conformal Al 2 O 3 coatings on LPSCl that are readily scalable to ≥ 50 g quantities using a rotating drum fixture. This detailed understanding of ALD surface reactions provides critical insights guiding the selection of future ALD chemistries with improved performance.

atomic layer deposition↗

DOE OSTI2025

Crystalline Peptoid Nanofibers with a Single-Unit Cell Cross Section

Ultranarrow crystalline one-dimensional nanostructures formed from soft materials facilitate precise structural control in nanomaterial design, which is essential for biomedicine and nanotechnology applications. Systematic control of their hierarchical structure is challenging due to the complexities of simultaneously manipulating multiple noncovalent interactions at such small scales. We employed a polypeptoid crystal motif as a supramolecular synthon to engineer ultranarrow crystalline nanofibers constrained to a single lattice axis by incorporating a single ionizable side chain into the hydrophobic core of a nanosheet-forming peptoid. Cryogenic transmission electron microscopy of the nanofibers revealed detailed molecular arrangements of a unit-cell cross-section and the presence of distinct pH-dependent lattice isoforms that resulted in morphological transformations. Molecular dynamics simulations demonstrated that the ionizable side chain plays a critical role in changing the local conformation of the unit cell, which further impacts the dimensionality of hierarchical structures. Moreover, these fibers were readily functionalized with biological ligands to afford one-dimensional (1D) protein arrays. This approach for the high-precision bottom-up assembly of ultranarrow 1D nanostructures offers significant potential for developing novel biomimetic nanostructures.

Lee, Yen Jea↗

NASA NTRS1994

Alpha-helical hydrophobic polypeptides form proton-selective channels in lipid bilayers

Proton translocation is important in membrane-mediated processes such as ATP-dependent proton pumps, ATP synthesis, bacteriorhodopsin, and cytochrome oxidase function. The fundamental mechanism, however, is poorly understood. To test the theoretical possibility that bundles of hydrophobic alpha-helices could provide a low energy pathway for ion translocation through the lipid bilayer, polyamino acids were incorporated into extruded liposomes and planar lipid membranes, and proton translocation was measured. Liposomes with incorporated long-chain poly-L-alanine or poly-L-leucine were found to have proton permeability coefficients 5 to 7 times greater than control liposomes, whereas short-chain polyamino acids had relatively little effect. Potassium permeability was not increased markedly by any of the polyamino acids tested. Analytical thin layer chromatography measurements of lipid content and a fluorescamine assay for amino acids showed that there were approximately 135 polyleucine or 65 polyalanine molecules associated with each liposome. Fourier transform infrared spectroscopy indicated that a major fraction of the long-chain hydrophobic peptides existed in an alpha-helical conformation. Single-channel recording in both 0.1 N HCl and 0.1 M KCl was also used to determine whether proton-conducting channels formed in planar lipid membranes (phosphatidylcholine/phosphatidylethanolamine, 1:1). Poly-L-leucine and poly-L-alanine in HCl caused a 10- to 30-fold increase in frequency of conductive events compared to that seen in KCl or by the other polyamino acids in either solution. This finding correlates well with the liposome observations in which these two polyamino acids caused the largest increase in membrane proton permeability but had little effect on potassium permeability. Poly-L-leucine was considerably more conductive than poly-L-alanine due primarily to larger event amplitudes and, to a lesser extent, a higher event frequency. Poly-L-leucine caused two populations of conductive events, one in the 0.1-0.5 pA range, and one in the 1.0-5.0 pA range, whereas nearly all events caused by poly-L-alanine were in the 0.1-0.5 pA range at an applied voltage of +60 mV. The channel-like activity appeared to switch between conductive and nonconductive states, with most open-times in the range of 50-200 ms. We conclude that hydrophobic polyamino acids produce proton-conducting defects in lipid bilayers that may be used to model functional proton channels in biological membranes.

NASA Discipline Exobiology↗

NASA NTRS1980

Generation of C-type cascade grids for viscous flow computation

A rapid procedure for generating C-type cascade grids suitable for viscous flow computations in turbomachinery blade rows is presented. The resulting mesh is periodic from one blade passage to the next, nearly orthogonal, and continuous across the wake downstream of a blade. The procedure employs a pair of conformal mappings that take the exterior of the cascade into the interior of an infinite strip with curved boundaries. The final transformation to a rectangular computational domain is accomplished numerically. The boundary values are obtained from a panel solution of an integral equation and the interior values by a rapid ADI solution of Laplace's equation. Examples of C-type grids are presented for both compressor and turbine blades and the extension of the procedure to three dimensions is briefly outlined.

Sockol, P. M.↗

DOE OSTI2024

Celestial leaf amplitudes

Celestial amplitudes may be decomposed as weighted integrals of AdS 3 -Witten diagrams associated to each leaf of a hyperbolic foliation of spacetime. We show, for the Kleinian three-point MHV amplitude, that each leaf subamplitude is smooth except for the expected light-cone singularities. Moreover, we find that the full translationally-invariant celestial amplitude is simply the residue of the pole in the leaf amplitude at the point where the total conformal weights of the gluons equals three. This full celestial amplitude vanishes up to light-cone contact terms, as required by spacetime translation invariance, and reduces to the expression previously derived by Mellin transformation of the Parke-Taylor formula.

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2025

Enantioselective Hydrodifluoroalkylation of Alkenes with Conformationally Tuned Peptidyl Hydrogen Atom Transfer Catalysts

Here, we report the enantioselective hydrodifluoroalkylation of alkenes proceeding via an asymmetric hydrogen atom transfer (HAT) event catalyzed by thiol-containing tetrapeptides. Photocatalytic generation of a difluoroacetyl radical followed by carbon–carbon bond formation results in a prochiral carbon-centered radical that engages with the chiral catalyst. A trialkylamine reductant is proposed to turn over the catalyst in this net-reductive transformation. Notably, incorporating an (S)-β-methyl-substituted cysteine as the N-terminal residue improved selectivity relative to that of the native N-terminal cysteine (Cys) residue, and X-ray crystallographic analysis supports the conformational underpinning of this effect. A range of enantioenriched γ-substituted amides were synthesized in up to a 96:4 enantiomeric ratio, demonstrating the broad functional group tolerance of this method. Models accounting for asymmetric induction are proposed with supporting DFT calculations.

08 HYDROGEN↗

DOE OSTI2025

CryoTEN: efficiently enhancing cryo-EM density maps using transformers

Abstract Motivation Cryogenic electron microscopy (cryo-EM) is a core experimental technique used to determine the structure of macromolecules such as proteins. However, the effectiveness of cryo-EM is often hindered by the noise and missing density values in cryo-EM density maps caused by experimental conditions such as low contrast and conformational heterogeneity. Although various global and local map-sharpening techniques are widely employed to improve cryo-EM density maps, it is still challenging to efficiently improve their quality for building better protein structures from them. Results In this study, we introduce CryoTEN—a 3D UNETR++ style transformer to improve cryo-EM maps effectively. CryoTEN is trained using a diverse set of 1295 cryo-EM maps as inputs and their corresponding simulated maps generated from known protein structures as targets. An independent test set containing 150 maps is used to evaluate CryoTEN, and the results demonstrate that it can robustly enhance the quality of cryo-EM density maps. In addition, automatic de novo protein structure modeling shows that protein structures built from the density maps processed by CryoTEN have substantially better quality than those built from the original maps. Compared to the existing state-of-the-art deep learning methods for enhancing cryo-EM density maps, CryoTEN ranks second in improving the quality of density maps, while running >10 times faster and requiring much less GPU memory than them. Availability and implementation The source code and data are freely available at https://github.com/jianlin-cheng/cryoten.

Biochemistry & Molecular Biology↗

NASA NTRS1975

Analysis of liquid-metal-jet impingement cooling in a corner region and for a row of jets

A conformal mapping method was used to analyze liquid-metal-jet impingement heat transfer. The jet flow region and energy equation are transformed to correspond to uniform flow in a parallel plate channel with nonuniform heat addition along a portion of one wall. The exact solution for the wall-temperature distribution was obtained in the transformed channel, and the results are mapped back into the physical plane. Two geometries are analyzed. One is for a single slot jet directed either into an interior corner formed by two flat plates, or over the external sides of the corner; the flat plates are uniformly heated, and the corner can have various included angles. The heat-transfer coefficient at the stagnation point at the apex of the plates is obtained as a function of the corner angle, and temperature distributions are calculated along the heated walls. The second geometry is an infinite row of uniformly spaced parallel slot jets impinging normally against a uniformly heated plate. The heat-transfer behavior is obtained as a function of the spacing between the jets. Results are given for several jet Peclet numbers from 5 to 50.

Siegel, R.↗

DOE OSTI2025

From sequence to protein structure and conformational dynamics with artificial intelligence/machine learning

The 2024 Nobel Prize in Chemistry was awarded in part for de novo protein structure prediction using AlphaFold2, an artificial intelligence/machine learning (AI/ML) model trained on vast amounts of sequence and three-dimensional structure data. AlphaFold2 and related models, including RoseTTAFold and ESMFold, employ specialized neural network architectures driven by attention mechanisms to infer relationships between sequence and structure. At a fundamental level, these AI/ML models operate on the long-standing hypothesis that the structure of a protein is determined by its amino acid sequence. More recently, AlphaFold2 has been adapted for the prediction of multiple protein conformations by subsampling multiple sequence alignments. Herein, we provide an overview of the deterministic relationship between sequence and structure, which was hypothesized over half a century ago with profound implications for the biological sciences ever since. We postulate that protein conformational dynamics are also determined, at least in part, by amino acid sequence and that this relationship may be leveraged for construction of AI/ML models dedicated to predicting protein conformational ensembles. Accordingly, we describe a conceptual model architecture, which may be trained on sequence data in combination with conformationally sensitive structural information, coming primarily from nuclear magnetic resonance (NMR) spectroscopy. Notwithstanding certain limitations in this context, NMR offers abundant structural heterogeneity conducive to conformational ensemble prediction. As NMR and other data continue to accumulate, sequence-informed prediction of protein structural dynamics with AI/ML has the potential to emerge as a transformative capability across the biological sciences.

Artificial intelligence↗

DOE OSTI2026

Nanocrystal Geometry Governs Phase Transformation Pathways in Palladium Hydride

Pathways and structural dynamics of phase transformations impact performance of materials in energy and information storage technologies. Palladium hydride (PdH x ) nanocrystals are an ideal model system for studying solute-induced phase transformations, where elastic energy from lattice mismatch between α-PdH x and β-PdH x phases is often considered a key to determining the transformation pathways. α/β-PdH x interfacial elastic energy is affected by the confined geometry of a nanocrystal. However, how nanocrystal geometry influences phase transformation pathways is largely unknown. Using in situ liquid phase transmission electron microscopy, we directly visualize hydrogenation in Pd nanocrystals with two geometries, a nanocube and a hexagonal nanoplate. Both follow similar sequences of an initially curved nucleus, interface flattening, and reverse-stage nucleation; however, their evolving α/β-PdH x interfaces exhibit geometry-dependent crystallographic alignments. In nanocubes, {100}-aligned configurations conform to static elastic energy ordering, representing a pathway that maintains a local mechanical equilibrium, whereas nanoplates display both {110}- and {211}-aligned interfaces. Theoretical simulations show that geometry determines the accessibility of alternative phase transformation pathways as the system is driven far from equilibrium during hydrogenation. In conclusion, these findings identify geometry as a fundamental parameter for directing phase transformation pathways, offering design principles for accessing atypical configurations and improving properties of intercalation-based devices.

Lee, Daewon [Lawrence Berkeley National Laboratory↗

NASA NTRS1984

Method and apparatus for self-calibration and phasing of array antenna

A technique for self-calibrating and phasing a lens-feed array antenna, while normal operation is stopped, utilizes reflected energy of a continuous and coherent wave broadcast by a transmitter through a central feed while a phase controller advances the phase angles of reciprocal phase shifters in radiation electronics of the array elements at different rates to provide a distinct frequency modulation of electromagnetic wave energy returned by reflection in one mode and leakage in another mode from the radiation electronics of each array element. The composite return signal received by a synchronous receiver goes through a Fourier transform processing system and produces a response function for each antenna element. Compensation of the phase angles for the antenna elements required to conform the antenna response to a precomputed array pattern is derived from the reciprocal square root of the response functions for the antenna elements which, for a rectangular array of NXM elements, is a response function T(n,m). A third mode of calibration uses an external pilot tone from a separate antenna element. Respective responses are thus obtained from the three modes of calibration.

Wu, C.↗

NASA NTRS1987

A comparison of two conformal mapping techniques applied to an aerobrake body

Conformal mapping is a classical technique which has been utilized for solving problems in aerodynamics and hydrodynamics. Conformal mapping has been successfully applied in the construction of grids around airfoils, engine inlets and other aircraft configurations. Conformal mapping techniques were applied to an aerobrake body having an axis of symmetry. Two different approaches were utilized: (1) Karman-Trefftz transformation; and (2) Point Wise Schwarz Christoffel transformation. In both cases, the aerobrake body was mapped onto a near circle, and a grid was generated in the mapped plane. The mapped body and grid were then mapped back into physical space and the properties of the associated grids were examined. Advantages and disadvantages of both approaches are discussed.

Hommel, Mark J.↗

NASA NTRS1973

Numerical calculation of the three dimensional transonic flow over a yawed wing.

Results are presented of calculations of the three dimensional steady transonic flow over a finite yawed wing. The full potential flow equation is solved in a transformed coordinate system which permits the boundary conditions to be satisfied exactly. The correct differential properties are enforced by rotating the difference scheme to conform with the flow direction, and fast convergence is assured by simulating a time dependent equation designed to settle quickly to a steady state. Computed lift drag ratios are consistent with the results of wind tunnel tests of a yawed wing conducted by R. T. Jones (1972).-

Jameson, A.↗

NASA NTRS2011

Compact Polarimetry in a Low Frequency Spaceborne Context

Compact polarimetry has been shown to be an interesting alternative mode to full polarimetry when global coverage and revisit time are key issues. It consists on transmitting a single polarization, while receiving on two. Several critical points have been identified, one being the Faraday rotation (FR) correction and the other the calibration. When a low frequency electromagnetic wave travels through the ionosphere, it undergoes a rotation of the polarization plane about the radar line of sight for a linearly polarized wave, and a simple phase shift for a circularly polarized wave. In a low frequency radar, the only possible choice of the transmit polarization is the circular one, in order to guaranty that the scattering element on the ground is illuminated with a constant polarization independently of the ionosphere state. This will allow meaningful time series analysis, interferometry as long as the Faraday rotation effect is corrected for the return path. In full-polarimetric (FP) mode, two techniques allow to estimate the FR: Freeman method using linearly polarized data, and Bickel and Bates theory based on the transformation of the measured scattering matrix to a circular basis. In CP mode, an alternate procedure is presented which relies on the bare surface scattering properties. These bare surfaces are selected by the conformity coefficient, invariant with FR. This coefficient is compared to other published classifications to show its potential in distinguishing three different scattering types: surface, doublebounce and volume. The performances of the bare surfaces selection and FR estimation are evaluated on PALSAR and airborne data. Once the bare surfaces are selected and Faraday angle estimated over them, the correction can be applied over the whole scene. The algorithm is compared with both FP techniques. In the last part of the paper, the calibration of a CP system from the point of view of classical matrix transformation methods in polarimetry is proposed.

radar polarization diversity↗

NASA NTRS1993

Free-Stream-Capturing Metrics

Report summarizes techniques for preservation of free-stream flows in finite-volume and finite-difference flow computations involving transformations between moving and stationary coordinates. Techniques necessary for accurate computations of complicated flows; such as, computing flow about helicopter rotor by use of grid conforming to and moving with rotor blades.

Obayashi, Shigeru↗

DOE OSTI2025

CSGL: chemical synthesis graph learning for molecule representation

Abstract Motivation Molecule representation learning (MRL) translates molecules into a real vector space, serving as input to downstream tasks in biology, chemistry, and computer science. This article introduces a chemical synthesis graph learning (CSGL) framework, which enhances MRL by considering both the atomic structures of molecules and their roles in chemical reactions through a hierarchical graph representation. Specifically, molecules are first modeled based on their molecular graphs, which capture atomic-level structural information. They are then further refined using a chemical synthesis graph, where nodes represent reactant and product molecule sets, and edges encode chemical transformations between reactants and products (e.g. changes in molecular structures). CSGL optimizes molecular embeddings of reactant and product nodes in a fashion that ensures the embeddings conform to a chemical balance constraint. Results Experimental results show that our method CSGL achieves strong performance on a variety of tasks, including product prediction, reaction classification, and molecular property prediction. Availability and implementation https://github.com/li-2023/CSGL.

Biochemistry & Molecular Biology↗

DOE OSTI2025

Stochastic Dark Matter from Curvature Perturbations

We investigate the production of dark matter from metric perturbations produced during inflation or in standard cosmology. Perturbations break Weyl flatness of the Friedmann-Lemaître-Robertson-Walker metric, allowing conformally coupled fields—in particular, fermions studied here—to be produced even when their mass is negligible. Particle production can be computed by studying the Bogoliubov transformation induced by the stochastic background. For perturbations generated during inflation, we present a closed formula for the resulting abundance of particles that depends solely on the power spectrum of curvature perturbations at the end of inflation. This production mechanism can be dominant especially if the amplitude of curvature perturbations is enhanced for modes that exit the horizon toward the end of inflation. In the simplest scenario, the critical dark matter abundance is reproduced for M ≳ 10 6 GeV . Published by the American Physical Society 2025

Garani, Raghuveer (ORCID:0000000175539914)↗

DOE OSTI2024

Infrared fixed point in the massless twelve-flavor SU(3) gauge-fermion system

We present strong numerical evidence for the existence of an infrared fixed point in the renormalization group flow of the SU(3) gauge-fermion system with twelve massless fermions in the fundamental representation. Our numerical simulations using nHYP-smeared staggered fermions with Pauli-Villars improvement do not exhibit any first-order bulk phase transition in the investigated parameter region. We utilize an infinite volume renormalization scheme based on the gradient flow transformation to determine the renormalization group β function. The gradient flow β function exhibits a zero at g GF ⋆ 2 = 6.60 ( 62 ) , implying that the system is infrared conformal. We calculate the leading irrelevant critical exponent γ g ⋆ = 0.199 ( 32 ) . Our prediction for γ g ⋆ is consistent with available literature at the 1 − 2 σ level. Published by the American Physical Society 2024

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗