Development of a Fully Implicit Flow and Solute Transport Model in PFLOTRAN.
Abstract not provided.
Fukuyama, David↗
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Verification of an energy-conserving semi-implicit electrostatic particle-in-cell scheme for modeling high-density plasma at scale
A verification study of a semi-implicit energy-conserving electrostatic particle-in-cell algorithm is presented. The algorithm relaxes the time-step and mesh-size constraints that require resolution of the plasma period and Debye length associated with traditional explicit momentum-conserving particle-in-cell algorithms. Physical implications and applicability of using the semi-implicit scheme for modeling high-density plasmas are discussed. Where possible, numerical results are compared against analytical solutions. The simulation results indicate that the algorithm is stable at time steps larger than twice the inverse plasma frequency and cell sizes larger than the Debye length. It is found that the algorithm gives adequate results, provided that the distribution function and the spatiotemporal scales dictating the physics of the problem are resolved. As such, the algorithm may provide a robust method for kinetic modeling of high-density plasmas at scale.
Cyclotron resonance↗
A diagonally inverted LU implicit multigrid scheme for the 3-D Navier-Stokes equations and a two equation model of turbulence
An LU implicit multigrid algorithm is developed to calculate 3-D compressible viscous flows. This scheme solves the full 3-D Reynolds-Averaged Navier-Stokes equation with a two-equation kappa-epsilon model of turbulence. The flow equations are integrated by an efficient, diagonally inverted, LU implicit multigrid scheme while the kappa-epsilon equations are solved, uncoupled from the flow equations, by a block LU implicit algorithm. The flow equations are solved within the framework of the multigrid method using a four-grid level W-cycle, while the kappa-epsilon equations are iterated only on the finest grid. This treatment of the Reynolds-Averaged Navier-Stokes equations proves to be an efficient method for calculating 3-D compressible viscous flows.
Yokota, Jeffrey W.↗
A diagonally inverted LU implicit multigrid scheme for the 3-D Navier-Stokes equations and a two equation model of turbulence
An LU implicit multigrid algorithm is developed to calculate 3-D compressible viscous flows. This scheme solves the full 3-D Reynolds-Averaged Navier-Stokes equation with a two-equation kappa-epsilon model of turbulence. The flow equations are integrated by an efficient, diagonally inverted, LU implicit multigrid scheme while the kappa-epsilon equations are solved, uncoupled from the flow equations, by a block LU implicit algorithm. The flow equations are solved within the framework of the multigrid method using a four-grid level W-cycle, while the kappa-epsilon equations are iterated only on the finest grid. This treatment of the Reynolds-Averaged Navier-Stokes equations proves to be an efficient method for calculating 3-D compressible viscous flows.
Yokota, Jeffrey W.↗
Advancing representations of equity and justice in climate mitigation futures
THIS PAPER WAS PRIMARILY COMPLETED PRIOR TO THE AUTHOR JOINING PNNL AND NO DOE FUNDING WAS USED FOR THIS PAPER. In this work, we review how equity and justice issues in global climate mitigation scenarios are addressed within Integrated Assessment Models (IAMs) and propose a new research agenda to strengthen their integration in model development and application. We begin by examining prominent concerns at the science-policy interface. We introduce a typology of equity and justice limitations in climate mitigation scenarios, distinguishing among structural, methodological, and epistemological biases that shape what integrated assessment models can reveal at policy-relevant scales. Reflecting on these concerns, we propose a research agenda that describes new avenues of work and draws together distinct emerging initiatives. This agenda is based on the feasibility and depth of required interventions, from incremental improvements to structural reforms and alternative participatory approaches. Drawing on reflexive insights from integrated assessment practitioners, it addresses the operational challenges of translating justice concepts into metrics, including risks of reductionism, tokenism, and narrow definitions. Underlying this research agenda is a recognition that modeling communities must engage more critically with implicit assumptions in model design and use that have equity and justice implications. Achieving equitable climate futures will require transformative actions that integrate diverse justice concerns, advance sustainable development goals, and confront systemic inequities across both human and ecological dimensions. Although models will never capture all these aspects, they can be significantly enhanced to support more informed discussion and practical application. Our contribution proposes a way forward to achieving this goal.
Pachauri, Shonali↗
Structural Error and Identifiability in Mathematical Models
Errors and previously implicit assumptions treated explicitly. Paper discusses errors in mathematical models of physical systems and problem of identifying model from system input and output. Problem approached by explicitly taking account of erroneous choices of model structure. Paper concerned specifically with linear or weakly nonlinear models.
Hadaegh, F. Y.↗
Effect of Spatial Filtering in Implicit Large-Eddy Simulations of Separated Flows
The relatively high Reynolds number of turbulent flows encountered in various applications puts these problems well beyond the reach of direct numerical simulation (DNS) at present. Meanwhile, lower-fidelity Reynolds-averaged Navier-Stokes (RANS) calculations are known to be not accurate enough in complex problems, such as smooth-body flow separation and other flows involving highly-unsteady phenomena. Hence, given the current infeasibility of DNS and the unsatisfactory performance of RANS, intermediate techniques such as large-eddy simulation (LES) and hybrid RANS-LES, whose fidelity lie between RANS and DNS, have received much attention for application to various problems of practical importance. Modeling of the effect of missing scales on resolved scales, also known as subgrid-scale (SGS) modeling, is an important subject for LES. SGS models can be broadly categorized as explicit or implicit approaches. The explicit approach is based on an SGS model that explicitly appears in the governing equations expressed in the form of so-called “filtered Navier-Stokes equations”, which describe the evolution of the turbulence scales resolved by the LES grid. The effect of the scales unresolved by the grid is represented by the SGS model. The implicit modeling approach, on the other hand, does not employ an explicit model but instead treats the intrinsic dissipation of the numerical discretization scheme as an implicit SGS model. An LES without an explicit SGS model is commonly termed as an implicit LES (ILES). The relative merits of one SGS modeling approach over another is a subject of ongoing debate. We have opted to employ an ILES methodology, based on high-order compact finite-difference and spatial filtering schemes, in our recent investigations of separated flow problems [1, 2]. Further discussion of our preference of ILES over explicit LES is provided in Uzun and Malik [2]. The spatial filtering operation, described in the next section, is treated as an implicit SGS model for the ILES. Some observations made during the course of our recent investigations, which pointed out to excessive numerical dissipation in certain parts of the flowfield, prompted us to take a closer look at the potential effect of the spatial filter on ILES predictions. This technical note is therefore devoted to spatial filter effects in the context of a high Reynolds number, transonic shock-induced separated flow.
Ali Uzun↗
An implicit solution for Asay foil trajectories generated by separable, sustained-production ejecta source models
We present a simple implicit solution for the time-dependent trajectory of a thin Asay foil ejecta diagnostic for the general case where the impinging ejecta cloud is generated by a source function characterized by an arbitrary (sustained) time dependence and a time-independent (stationary) particle velocity distribution. In the limit that the source function time dependence becomes a delta function, this solution—which is amenable to rapid numerical calculations of arbitrary accuracy—exactly recovers a previously published solution for the special case of instantaneous ejecta production. We also derive simple expressions for the free-surface arrival (catch-up) time as well as the true ejecta areal mass accumulation on the accelerating foil and place bounds on the level of error incurred when applying instant-production mass solutions to a sustained-production trajectory. We demonstrate these solutions with example calculations for hypothetical source functions spanning a wide range of ejecta production durations, velocity distributions, and temporal behaviors. These calculations demonstrate how the foil trajectory is often insensitive to the temporal dependence of the source function, instead being dominated by the velocity distribution. We quantify this insensitivity using a “compatibility score” metric. Under certain conditions, one may capitalize upon this insensitivity to obtain a good approximation of the second integral of the velocity distribution from the observed foil trajectory.
70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
Small-Signal Angle Stability-Oriented False Data Injection Cyber-Attacks on Power Systems
The small-signal angle stability (SSAS) of a power system is determined by the property of operation points. The widely applied false data injection (FDI) cyber-attack, however, is able to stealthily mislead the optimal power flow (OPF) and thus compromise operation points, leading to damages to the SSAS margin. Here, to provide insights for cyber defenders, this paper proposes and investigates a stealthy SSAS-oriented FDI cyber-attack focusing on two attacking purposes, i.e., the SSAS margin and operation cost, with higher priority on the former one. First, this paper establishes a novel bi-level model with an implicit SSAS constraint based on a structure preserving model to compromise operation points. Then, for the SSAS interarea mode in a typical two-area system, this paper formulates closed-form expressions of how the SSAS margin and operation cost behave with respect to stealthy injections. By comparison, for the SSAS local mode in general power systems, this paper proposes a moving target cyber-attack-based hierarchical solution algorithm. Simulation results on a two-area system, a Kundur 11 bus system, and a modified IEEE 14 bus system demonstrate the significant damaging effects of the proposed SSAS-oriented FDI cyber-attack and the conflict between the two attacking purposes.
Benders decomposition↗
A Numerical Study of Hypoxia in Chesapeake Bay Using an Unstructured Grid Model: Validation and Sensitivity to Bathymetry Representation
A three-dimensional unstructured-grid hydrodynamic and water quality model (Semi-implicit Cross-scale Hydroscience Intergrated System Model-Integrated Compartment Model) is applied successfully for Chesapeake Bay. The model is validated with observations of salinity, chlorophyll-a, dissolved oxygen, nutrients, and phytoplankton productions from the year 1991 to 1995 for the mainstem and some major tributaries, based on multiple model skill scores. Model experiments are conducted to test the importance of having (1) an accurate representation of bathymetry to correctly predict hypoxia and other processes and (2) a high-resolution model grid for tributaries to correctly simulate water quality variables. Further, comparison with the model experiment results with bathymetry smoothing indicates that bathymetry smoothing, as commonly used for many systems, changes the stratification and lateral circulation pattern, resulting in more salt intrusion into shallow water regions, and an increase in the freshwater age. Consequently, a model with bathymetry smoothing can lead to an unrealistic prediction of the distribution of hypoxia and phytoplankton production. Local grid refinement shows significant improvement of model simulations on local stratification and water quality variables. Overall, the use of high-resolution unstructured grid model leads to a faithful representation of the complex geometry, and thus a seamless cross-scale capability for simulating water quality processes in the Bay including tributaries and tidal creeks.
54 ENVIRONMENTAL SCIENCES↗
Bayesian Optimization Framework for Imperfect Data or Models
Conventional Bayesian optimization methods implicitly assume that the data and model being optimized are “perfect.” This assumption leads to inaccurate posterior probability distribution functions (PDFs) when applied to “imperfect” data or models. The new Bayesian optimization framework presented in this report provides a way to parameterize the effect of imperfections usually encountered in a prior PDF of generalized data or a model on the posterior PDF. The effects of imperfections are parameterized by a set of constraints imposed on the posterior expectation values of deviations between the data and the model and on their covariance matrix elements. A particular set of values for these constraints conveys an evaluator’s best estimate of the effect of imperfections on the corresponding posterior expectation values. When a prior PDF of generalized data is assumed to be normal, an expression for a posterior PDF satisfying an arbitrary set of constraints is derived analytically for linear models. An analogous iterative algorithm is given for nonlinear models. The corresponding posterior PDF should be used to estimate any posterior expectation values in the presence of imperfections parameterized by that set of constraints. A posterior PDF of a conventional Bayesian optimization method is recovered analytically when all evaluator-specified constraints are set to zero (i.e., in the absence of any imperfections). The analytical expressions derived in this report for normal PDFs and linear models were verified numerically by a Metropolis–Hastings Monte Carlo method. The methods presented herein could be applied to any kind of data or models, including differential cross-section data or integral benchmark experiments.
97 MATHEMATICS AND COMPUTING↗
On High-Order/Low-Order and Micro-Macro Methods for Implicit Time-Stepping of the BGK Model
In this paper, a high-order/low-order (HOLO) method is combined with a micro-macro (MM) decomposition to accelerate iterative solvers in fully implicit time-stepping of the Bhatnagar–Gross–Krook (BGK) equation for gas dynamics. The MM formulation represents a kinetic distribution as the sum of a local Maxwellian and a perturbation. In highly collisional regimes, the perturbation away from initial and boundary layers is small and can be compressed to reduce the overall storage cost of the distribution. The convergence behavior of the MM methods, the usual HOLO method, and the standard source iteration method is analyzed on a linear BGK model. Both the HOLO and MM methods are implemented using a discontinuous Galerkin (DG) discretization in phase space, which naturally preserves the consistency between high- and low-order models required by the HOLO approach. Furthermore, the accuracy and performance of these methods are compared on the Sod shock tube problem and a sudden wall heating boundary layer problem. Overall, the results demonstrate the robustness of the MM and HOLO approaches and illustrate the compression benefits enabled by the MM formulation when the kinetic distribution is near equilibrium.
BGK model↗
A Comparative Study of Electrical Double Layer Effects for CO Reduction Reaction Kinetics
Solvation models describe how the interactions between the solutes and solvents affect the reactivity and selectivity in electrochemical processes. In this study, we developed a framework for evaluating the effects of applied potential and electrical double layer on CO reduction (COR), comparing fully explicit, implicit, and hybrid solvation models at the standard hydrogen electrode (SHE) scale. We analyzed all crucial intermediates leading to the production of C 1 and C 2 products and found good agreement across these models. Some notable differences were observed in the implicit description of *C and *CO adsorption at higher overpotentials and overall trends in the adsorption energies within the hybrid model. Using this unified SHE framework, we built comparable microkinetic models for COR kinetics and rates. Despite small differences in thermodynamics, solvation-model-based microkinetic simulations showed good agreement for onset potentials against the benchmark experiment. Only qualitative difference was observed for C 1+ versus hydrogen evolution at high overpotentials for the implicit model. Finally, we constructed a generalized C 2 selectivity map in descriptor space (U SHE , ΔG electrolyte CO ), which highlights the limitations of a copper-based COR catalyst and guides the search for optimal descriptor parameters to maximize C 2 selectivity. In conclusion, these findings demonstrate the importance of considering electrical double layer effects in reduction reactions and offer a useful framework for comparing solvation models and predicting optimal electrochemical conditions for specific applications.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
An implicit finite-difference code for a two-equation turbulence model for three-dimensional flows
An implicit finite difference code was developed which solves the transport equations for the turbulence kinetic energy and its dissipation rate in generalized coordinates in three dimensions. The finite difference equations are solved using the Beam-Warming algorithm. The kinetic energy-dissipation code, KEM, provides the closure; i.e., the turbulent viscosity for calculation of either compressible or incompressible flows. Turbulent internal flow over a backward-facing step has been calculated using the present code in conjunction with the Incompressible Navier-Stokes Code, INS3D. The results are in good agreement with experiments and two dimensional computations of other researchers.
Kaul, U. K.↗
Modeling supersonic combustion using a fully implicit numerical method
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Wilson, Gregory J.↗
About the coupling of turbulence closure models with averaged Navier-Stokes equations
The MacCormack implicit predictor-corrector model (1981) for numerical solution of the coupled Navier-Stokes equations for turbulent flows is extended to nonconservative multiequation turbulence models, as well as the inclusion of second-order Reynolds stress turbulence closure. A scalar effective pressure turbulent contribution to the pressure field is defined to approximate the effects of the Reynolds stress in strongly sheared flows. The Jacobian matrices of the transport equations are diagonalized to reduce the required computer memory and run time. Techniques are defined for including turbulence in the diagonalization. Application of the method is demonstrated with solutions generated for transonic nozzle flow and for the interaction between a supersonic flat plate boundary layer and a 12 deg compression-expansion ramp.
Vandromme, D.↗
Direct implicit and explicit energy-conserving particle-in-cell methods for modeling of capacitively coupled plasma devices
Achieving large-scale kinetic modeling is a crucial task for the development and optimization of modern plasma devices. With the trend of decreasing pressure in applications, such as plasma etching, kinetic simulations are necessary to self-consistently capture the particle dynamics. The standard, explicit, electrostatic, momentum-conserving particle-in-cell method suffers from restrictive stability constraints on spatial cell size and temporal time step, requiring resolution of the electron Debye length and electron plasma period, respectively. This results in a very high computational cost, making the technique prohibitive for large volume device modeling. We investigate the direct implicit algorithm and the explicit energy conserving algorithm as alternatives to the standard approach, both of which can reduce computational cost with a minimal (or controllable) impact on results. These algorithms are implemented into the well-tested EDIPIC-2D and LTP-PIC codes, and their performance is evaluated via 2D capacitively coupled plasma discharge simulations. The investigation reveals that both approaches enable the utilization of cell sizes larger than the Debye length, resulting in a reduced runtime, while incurring only minor inaccuracies in plasma parameters. The direct implicit method also allows for time steps larger than the electron plasma period; however, care must be taken to avoid numerical heating or cooling. It is demonstrated that by appropriately adjusting the ratio of cell size to time step, it is possible to mitigate this effect to an acceptable level.
70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
Acceleration of Power System Dynamic Simulations Using a Deep Equilibrium Layer and Neural ODE Surrogate
The dominant paradigm for power system dynamic simulation is to build system-level simulations by combining physics-based models of individual components. The sheer size of the system along with the rapid integration of inverter-based resources exacerbates the computational burden of running time domain simulations. Here, in this paper, we propose a data-driven surrogate model based on implicit machine learningspecifically deep equilibrium layers and neural ordinary differential equationsto learn a reduced order model of a portion of the full underlying system. The data-driven surrogate achieves similar accuracy and reduction in simulation time compared to a physics-based surrogate, without the constraint of requiring detailed knowledge of the underlying dynamic models. This work also establishes key requirements needed to integrate the surrogate into existing simulation workflows; the proposed surrogate is initialized to a steady state operating point that matches the power flow solution by design.
Neural ordinary differential equations↗