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At least 145 records · Page 8

Excited Vibrational Level Rotational Constants for SiC2: A Sensitive Molecular Diagnostic for Astrophysical Conditions

Silacyclopropynylidene, SiC2, is a known and highly abundant circumstellar molecule. Its spectrum has been established as a major component of lines observed toward the carbon-rich star IRC +10216 (CW Leonis). It has been detected in its low-lying v(sub 3) = 1 and 2 vibrational states as well as in various isotopic compositions. Increasing sensitivity and spatial resolution will enable many more emission or absorption lines to be detected. In order to detect new molecular species, unassigned lines of known species must be identified. This work uses established ab initio quartic force fields to produce data necessary for this classification of lines related to SiC2. Agreement between the theoretical vibrational frequencies and known rotational and spectroscopic constants is quite good, as good as 5 cm(exp -1) and 3 MHz, respectively in some cases. Additionally, experimentally unknown vibrational frequencies and rotational constants are provided for the first overtones and combination bands in addition to 3(sub v3), the second overtone of the low-lying antisymmetric stretch/carbide rotation mode. Frequencies of v(sub 3) = 3 low-J rotational transitions of the main isotopic species are also estimated from published data for v(sub 3) ≤ 2. Further, we determine rotational and centrifugal distortion parameters for which in most cases vibrational effects due to the v(sub 3) mode were reduced to first, and in several cases also to second order. These values may approximate equilibrium values better than the ground state values. The data produced herein will aid in the experimental and observational characterization of this known astromolecule in order to identify some of the unassigned lines for a known entity.

Astrochemistry↗

Electron paramagnetic resonance studies of slowly tumbling vanadyl spin probes in nematic liquid crystals

The purposes of this vanadyl spin probe study are threefold: (1) to establish when the breakdown of motionally narrowed formulas occurs; (2) to analyze the experimental vanadyl EPR line shapes by the stochastic Lioville method as developed by Polnaszek et al. (1973) for slow tumbling in an anisotropic liquid; and (3) to compare the vanadyl probe study results with those of Polnaszek and Freed (1975). Spectral EPR line shapes are simulated for experimental spectra of vanadyl acetylacetonate (VOAA) in nematic liquid crystal butyl p-(p-ethoxyphenoxycarbonyl) phenyl carbonate (BEPC) and Phase V of EM laboratories. It is shown that the use of typical vanadyl complexes as spin probes for nematic liquid crystals simplifies the theoretical analysis and the subsequent interpretation. Guidelines for the breakdown of motionally narrowed formulas are established. Both the slow tumbling aspects and the effects of non-Brownian rotation should be resolved in order to extract quantitative information about molecular ordering and rotational mobility.

Bruno, G. V.↗

High spectral and spatial resolution observations of the 12.28 micron emission from H2 in the Orion Molecular Cloud

The pure rotational S(2) line of H2 at 12.28 microns was sought in 44 positions in the Orion Molecular Cloud with 6-arcsec beams and 35 km/s spectral resolution; and it was detected in 27 positions. The lines are approximately symmetric and have full widths at half-maximum ranging from 100 km/s down to the resolution limit. The distribution of intensities and line shapes is largely consistent with that observed in the 2-micron hydrogen transitions; however, unexpectedly complex line profiles and point-to-point variations in line shapes appear, particularly in the region near IRc9.

Beck, S. C.↗

Molecular orbital predictions of the vibrational frequencies of some molecular ions

The initial detections of IR vibration-rotation bands in polyatomic molecular ions by recent spectroscopic advances were guided by ab initio prediction of vibrational frequencies. The present calculations predict the vibrational frequencies of additional ions which are candidates for laboratory analysis. Neutral molecule vibrational frequencies were computed at three levels of theory and then compared with experimental data; the effect of scaling was also investigated, in order to determine how accurately vibrational frequencies could be predicted. For 92 percent of the frequencies examined, the relatively simple HF/6-31G theory's vibrational frequencies were within 100/cm of experimental values, with a mean absolute error of 49/cm. On this basis, the frequencies of 30 molecular ions (many possessing astrophysical significance) were computed.

Defrees, D. J.↗

CS J = 2 yields 1 emission toward the central region of M82

M82 is an irregular (Type II) galaxy located at a distance of approximately 3.5 Mpc. Its unusual appearance and high luminosity, particularly in the infrared, has led many astronomers to classify it as a starburst galaxy. This interpretation is supported by the observation of a large number of radio continuum sources within the central arcminute of the galaxy. These sources are thought to be associated with supernova remnants. The starburst in the central region of the galaxy is believed to have been triggered by tidal interaction with either M81 or the HI cloud surrounding the M81 group. High angular resolution CO-12 J=1 to 0 maps by Nakai (1984) and Lo et al. (1987) indicate the existence of a 400 to 450 pc rotating ring of molecular material about the central region of M82. Red- and blue-shifted absorption components of the HI and OH lines measured by Weliachew et al. (1984) provided the first evidence for the presence of the ring. Many astronomers, each using a different angular resolution, have compared CO-12 J=1 to 0, J=2 to 1, and J=3 to 2 emission and concluded that a large fraction of the CO emission is optically thin. Additional observations suggest that the molecular material toward the center of M82 is clumpy and dense. Unlike the lower rotational transitions of CO, CS is excited only at relatively high densities, n sub H sub 2 greater than or equal to 10(exp 4) cm(-3). It is in clouds with these densities that stars are expected to form. This makes CS an excellent probe of star formation regions. Researchers observed the CS J=2 to 1 transition (97.981 GHz) toward 52 positions in M82 using the National Radio Astronomy Observatory (NRAO) 12 m telescope.

Walker, C. E.↗

Broadening of the D lines and the relaxation of the resonance levels of sodium due to collisions with helium.

Calculated potentials for the NaHe molecule are used to obtain collision-induced widths and shifts for the sodium D lines together with cross sections for fine-structure transitions and the relaxation of the multipole polarizations of the resonance levels. The atomic collision is treated in an adiabatic approximation in which the colliding atoms form a molecular system which rotates during the collision. We find the resonance lines to be broadened equally and to be approximately 70% wider, and with associated shifts of an order of magnitude smaller, than expected on the basis of van der Waals forces. The dependence of the cross sections for relaxation of the multipole polarizations of the resonance levels on the molecular-coupling conditions and the rotation of the system during collision is discussed and indicates a limitation of the sum rule for these cross sections.

Lewis, E. L.↗

Electroweak Nuclear Properties from Single Molecular Ions in a Penning Trap

Here, we present a novel technique to probe electroweak nuclear properties by measuring parity violation (PV) in single molecular ions in a Penning trap. The trap’s strong magnetic field Zeeman shifts opposite-parity rotational and hyperfine molecular states into near degeneracy. The weak interaction-induced mixing between these degenerate states can be larger than in atoms by more than 12 orders of magnitude, thereby vastly amplifying PV effects. The single molecule sensitivity would be suitable for applications to nuclei across the nuclear chart, including rare and unstable nuclei.

electronic structure of atoms & molecules↗

Infrared Space Observatory Observations of Molecular Hydrogen in HH 54: Measurement of a Nonequilibrium Ratio of Ortho- to Para-H2

We have detected the S(1), S(2), S(3), S(4), and S(5) pure rotational lines of molecular hydrogen toward the outflow source HH 54 using the Short Wavelength Spectrometer on board the Infrared Space Observatory. The observed H2 line ratios indicate the presence of warm molecular gas with an H2 density of at least 10(sup 5) /cc and a temperature approximately 650 K in which the ratio of ortho- to para-H2 is only 1.2 -+ 0.4, significantly smaller than the equilibrium ratio of 3 expected in gas at that temperature. These observations imply that the measured ratio of ortho- to para-H2 is the legacy of an earlier stage in the thermal history of the gas when the gas had reached equilibrium at a temperature approximately 90 K. Based upon the expected timescale for equilibration, we argue that the nonequilibrium ratio of ortho- to para-H2 observed in HH 54 serves as a chronometer that places a conservative upper limit of approximately 5000 yr on the period for which the emitting gas has been warm. The S(2)/,S(l) and S(3)/S(1) H2 line ratios measured toward HH 54 are consistent with recent theoretical models of Timmermann for the conversion of para- to ortho-H2 behind slow, C-type shocks, but only if the preshock ratio of ortho- to para-H2 was approximately < 0.2.

Neufeld, David A.↗

Infrared Space Observatory Observations of Molecular Hydrogen in HH 54: Measurement of a Nonequilibrium Ratio of Ortho- to Para-H2

We have detected the S(1), S(2), S(3), S(4), and S(5) pure rotational lines of molecular hydrogen toward the outflow source HH 54 using the Short Wavelength Spectrometer on board the Infrared Space Observatory. The observed H2 line ratios indicate the presence of warm molecular gas with an H2 density of at least 10(exp 5) cm(exp -3) and a temperature approximately 650 K in which the ratio of ortho- to para-H2 is only 1.2 +/- 0.4, significantly smaller than the equilibrium ratio of 3 expected in gas at that temperature. These observations imply that the measured ratio of ortho- to para-H2 is the legacy of an earlier stage in the thermal history of the gas when the gas had reached equilibrium at a temperature approximately less than 90 K. Based upon the expected timescale for equilibration, we argue that the nonequilibrium ratio of ortho- to para-H2 observed in HH 54 serves as a chronometer that places a conservative upper limit of approximately 5000 yr on the period for which the emitting gas has been warm. The S(2)/S(1) and S(3)/S(1) H2 line ratios measured toward HH 54 are consistent with recent theoretical models of Timmermann for the conversion of para- to ortho-H2 behind slow, C-type shocks, but only if the preshock ratio of ortho- to para-H2 was approximately less than 0.2.

Neufeld, David A.↗

A molecular conveyor belt-associated protein controls the rotational direction of the bacterial type 9 secretion system

ABSTRACT Many bacteria utilize the type 9 secretion system (T9SS) for gliding motility, surface colonization, and pathogenesis. This dual-function motor supports both gliding motility and protein secretion, where rotation of the T9SS plays a central role. Fueled by the energy of the stored proton motive force and transmitted through the torque of membrane-anchored stator units, the rotary T9SS propels an adhesin-coated conveyor belt along the bacterial outer membrane like a molecular snowmobile, thereby enabling gliding motion. However, the mechanisms controlling the rotational direction and gliding motility of T9SS remain elusive. Shedding light on this mechanism, we find that in the gliding bacteriumFlavobacterium johnsoniae, deletion of the C-terminus of the conveyor belt-associated protein GldJ controls and, in fact, reverses the rotational direction of T9SS from counterclockwise (CCW) to clockwise (CW). This suggests that the interface between the conveyor belt-associated protein GldJ and the T9SS ring protein GldK plays an important role in controlling the directionality of T9SS, potentially by modulating its interaction with the stator complex GldLM, which drives motor rotation. Combined with MD simulation of the T9SS stator units GldLM, we suggest a “tri-component gearset” model where GldJ controls the rotational direction of its driver, the T9SS, thus providing adaptive sensory feedback to influence the motility of the gliding bacterium. IMPORTANCE The type 9 secretion system (T9SS) is fundamental to bacterial gliding motility, pathogenesis, and surface colonization. Our findings reveal that the C-terminal region of the conveyor belt-associated protein GldJ functions as a molecular switch which is capable of reversing the rotational direction of T9SS. Through the coordinated actions of the T9SS stator units (akin to a driving motor), the GldK ring (the gear that converts rotational energy into linear movement), and GldJ, this machinery forms a smart conveyor belt system reminiscent of flexible or cognitive mechanical conveyors. Such advanced conveyors can alter their direction to adapt to shifting demands. Here, we show that the bacterial T9SS similarly adjusts its rotational bias based on feedback from the conveyor belt-associated protein GldJ. This dual-role feedback mechanism underscores an evolved, controllable biological snowmobile, offering new avenues for studying how bacteria fine-tune motility in dynamic environments.

Microbiology↗

Retrieval of full angular- and energy-dependent complex transition dipoles in the molecular frame from laser-induced high-order harmonic signals with aligned molecules

High-order harmonic signals generated in molecules are the consequence of coherent summation of complex laser-induced transition dipoles $\textit{d}(θ, ω)$ with each fixed-in-space molecule; here $\theta$ is the angle of the molecular axis with respect to the laser polarization axis and $\omega$ is the harmonic energy. In the so-called rotational coherent spectroscopy, it is proposed to extract the fixed-in-space $\textit{d}(θ, ω)$ in the molecular frame by measuring harmonics generated by a probing laser from the rotational molecular wave packets that have been prepared by a prior pump laser. By varying the time delay between the two lasers, methods have been utilized to extract the $\theta$ dependence of both the amplitude and phase of each individual harmonic, but the relative phase between harmonics cannot be retrieved. Here we report that this limitation can be removed. It requires the additional measurement of harmonic spectra versus the pump-probe angles at one fixed time delay. The two-dimensional input harmonic data (time-delay and pump-probe angle) are then used to retrieve the full complex transition dipole $\textit{d}(θ, ω)$ using a retrieval method based on machine learning algorithms. Finally, we demonstrate this method on N 2 and CO 2 molecules.

74 ATOMIC AND MOLECULAR PHYSICS↗

The Shock Structure of Supernova Remnant IC443

We present and discuss ISO observations of IC443, a supernova remnant interacting with a molecular cloud. An SWS spectrum centered on molecular hydrogen clump R10E (RA(2000) = 6 17 7.6, Decl(2000) = 22 25 34.6) is dominated by strong [SiII] (34 microns) emission and the pure rotational transitions of molecular hydrogen ranging from 0-0 S(1) to 0-0 S(13). Fits to these H$-2$ lines imply a large column (approx. 7E19 cm$ {-2)$) of warm (T approx. 700 K) gas and an ortho/para ratio for hydrogen near 3. LWS Fabry-Perot spectra of [OI] (63 microns) and [CII] (158 microns) at positions R10E and C (RA(2000) = 6 17 42.8, Decl(2000) = 22 21 38.1) find broad (approx. 75 km/s), blue-shifted (-40 km/s) line profiles; their similarity strongly suggests a common, shock-generated origin for these two lines. The surprisingly large [CII]/[OI] ratio (approx. 0.1 to 0.2) confirms previous observations with the Kuiper Airborne Observatory. These [CII] and [OI] line intensities, the [SiII] intensity (above), and LWS grating measurements of OH (119 microns) and [OI] (145 microns) are all readily fit by a single, fast J-shock model. Although the [OI] (63) emission can alternatively be produced by a slow C-shock, this ensemble of lines can not be produced by such a shock and provides strong evidence for the existence of a J-shock. A 24-arcmin strip map shows that this far-infrared line emission is spatially correlated with the H$-2$ 1-0 S(1) emission, which most likely arises in an associated C-shock. In addition to this spatially correlated shock emission, the strip map identifies extended [CII] and [OI] emission with a significantly larger line ratio (approx. 0.6); this 'background' component is compared with current J-shock, C-shock, photo-dissociation region (PDR), and X-ray dissociation region (XDR) models in an effort to explain its origin.

Haas, Michael R.↗

Deuteron NMR (Nuclear Magnetic Resonance) in relation to the glass transition in polymers

H-2NMR is introduced as a tool for investigating slow molecular motion in the glass transition region of amorphous polymers. In particular, we compare H-2 spin alignment echo spectra of chain deuterated polystyrene with model calculations for restricted rotational Brownian motion. Molecular motion in the polyztyrene-toluene system has been investigated by analyzing H-2NMR of partially deuterated polystyrene and toluene, respectively. The diluent mobility in the mixed glass has been decomposed into solid and liquid components where the respective average correlation times differ by more than 5 decades.

Roessler, E.↗

Directional molecular flow analysis and leak detection with a rotatable gas analyzer in a large space simulation chamber

A system was developed and applied at the NASA Manned Spacecraft Center for measuring and analyzing directional molecular flows in a large thermal vacuum chamber in order to verify molecular environment and identify characteristic and abnormal test article and chamber conditions. The system is described, and some results obtained in over 1200 hours of operation are given.

Ehlers, H. K. F.↗