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At least 145 records · Page 8

Ecological forecasts for marine resource management during climate extremes

Forecasting weather has become commonplace, but as society faces novel and uncertain environmental conditions there is a critical need to forecast ecology. Forewarning of ecosystem conditions during climate extremes can support proactive decision-making, yet applications of ecological forecasts are still limited. We showcase the capacity for existing marine management tools to transition to a forecasting configuration and provide skilful ecological forecasts up to 12 months in advance. The management tools use ocean temperature anomalies to help mitigate whale entanglements and sea turtle bycatch, and we show that forecasts can forewarn of human-wildlife interactions caused by unprecedented climate extremes. We further show that regionally downscaled forecasts are not a necessity for ecological forecasting and can be less skilful than global forecasts if they have fewer ensemble members. Our results highlight capacity for ecological forecasts to be explored for regions without the infrastructure or capacity to regionally downscale, ultimately helping to improve marine resource management and climate adaptation globally.

54 ENVIRONMENTAL SCIENCES↗

Response of the Indian Summer Monsoon to Global Warming, Solar Geoengineering and its Termination

The response of the Indian Summer Monsoon (ISM) to global warming, solar geoengineering and its termination is examined using the multi-model mean of eight global climate model simulations from G2 experiment of the Geoengineering Model Intercomparison Project. Under the global warming scenario, land-ocean temperature contrasts and low-level monsoon circulation progressively strengthen accompanied by enhanced precipitation over the Indian subcontinent. Notably, in the solar geoengineered scenario, marginal surface cooling is projected over the majority of the ISM region, and there is strengthening of both upper and lower level circulation. Upon the termination of the geoengineering, the climatic conditions temperature, precipitation, and winds — would abruptly change to what it would have been under the global warming scenario, and such abrupt change may cause devastating consequences.

Bhowmick, Mansi↗

CMIP6 skill at predicting interannual to multi-decadal summer monsoon precipitation variability

Monsoons affect the economy, agriculture, and human health of two thirds of the world’s population. Therefore, predicting variations in monsoon precipitation is societally important. We explore the ability of climate models from the sixth phase of the Climate Model Intercomparison Project to predict summer monsoon precipitation variability by using hindcasts from the Decadal Climate Prediction Project (Component A). The multi-model ensemble-mean shows significant skill at predicting summer monsoon precipitation from one year to 6–9 years ahead. However, this skill is dependent on the model, monsoon domain, and lead-time. In general, the skill of the multi-model ensemble-mean prediction is low in year 1 but increases for longer-lead times and is largely consistent with externally forced changes. The best captured region is northern Africa for the 2–5 and 6–9 year forecast lead times. In contrast, there is no significant skill using the ensemble-mean over East and South Asia and, furthermore, there is significant spread in skill among models for these domains. By sub-sampling the ensemble we show that the difference in skill between models is tied to the simulation of the externally forced response over East and South Asia, with models with a more skilful forced response capable of better predictions. A further contribution is from skilful prediction of Pacific Ocean temperatures for the South Asian summer monsoon at longer lead-times. Therefore, these results indicate that predictions of the East and South Asian monsoons could be significantly improved.

54 ENVIRONMENTAL SCIENCES↗

Generation of a highly attenuated strain of Pseudomonas aeruginosa for commercial production of alginate

Alginate is an important polysaccharide that is commonly used as a gelling agent in foods, cosmetics and healthcare products. Currently, all alginate used commercially is extracted from brown seaweed. However, with environmental changes such as increasing ocean temperature and the increasing number of biotechnological uses of alginates with specific properties, there is an emerging need for more reliable and customizable sources of alginate. An alternative to seaweed for alginate production is Pseudomonas aeruginosa, a common Gram-negative bacterium that can form alginate containing biofilms. However, P. aeruginosa is an opportunistic pathogen that can cause life-threatening infections in immunocompromised patients. Therefore, we sought to engineer a non-pathogenic P. aeruginosa strain that is safe for commercial production of alginate. Using a homologous recombination strategy, we sequentially deleted five key pathogenicity genes from the P. aeruginosa chromosome, resulting in the marker-free strain PGN5. Intraperitoneal injection of mice with PGN5 resulted in 0% mortality, while injection with wild-type P. aeruginosa resulted in 95% mortality, providing evidence that the systemic virulence of PGN5 is highly attenuated. Importantly, PGN5 produces large amounts of alginate in response to overexpression of MucE, an activator of alginate biosynthesis. The alginate produced by PGN5 is structurally identical to alginate produced by wildtype P. aeruginosa, indicating that the alginate biosynthetic pathway remains functional in this modified strain. The genetic versatility of P. aeruginosa will allow us to further engineer PGN5 to produce alginates with specific chemical compositions and physical properties to meet different industrial and biomedical needs.

60 APPLIED LIFE SCIENCES↗

Chromosome-level genome assemblies and genetic maps reveal heterochiasmy and macrosynteny in endangered Atlantic Acropora

Abstract Background Over their evolutionary history, corals have adapted to sea level rise and increasing ocean temperatures, however, it is unclear how quickly they may respond to rapid change. Genome structure and genetic diversity contained within may highlight their adaptive potential. Results We present chromosome-scale genome assemblies and linkage maps of the critically endangered Atlantic acroporids,Acropora palmataandA. cervicornis. Both assemblies and linkage maps were resolved into 14 chromosomes with their gene content and colinearity. Repeats and chromosome arrangements were largely preserved between the species. The family Acroporidae and the genusAcroporaexhibited many phylogenetically significant gene family expansions. Macrosynteny decreased with phylogenetic distance. Nevertheless, scleractinians shared six of the 21 cnidarian ancestral linkage groups as well as numerous fission and fusion events compared to other distantly related cnidarians. Genetic linkage maps were constructed from oneA. palmatafamily and 16A. cervicornisfamilies using a genotyping array. The consensus maps span 1,013.42 cM and 927.36 cM forA. palmataandA. cervicornis, respectively. Both species exhibited high genome-wide recombination rates (3.04 to 3.53 cM/Mb) and pronounced sex-based differences, known as heterochiasmy, with 2 to 2.5X higher recombination rates estimated in the female maps. Conclusions Together, the chromosome-scale assemblies and genetic maps we present here are the first detailed look at the genomic landscapes of the critically endangered Atlantic acroporids. These data sets revealed that adaptive capacity of Atlantic acroporids is not limited by their recombination rates. The sister species maintain macrosynteny with few genes with high sequence divergence that may act as reproductive barriers between them. In the AtlanticAcropora, hybridization between the two sister species yields an F1 hybrid with limited fertility despite the high levels of macrosynteny and gene colinearity of their genomes. Together, these resources now enable genome-wide association studies and discovery of quantitative trait loci, two tools that can aid in the conservation of these species.

Biotechnology & Applied Microbiology↗

Predictability of Seawater DMS During the North Atlantic Aerosol and Marine Ecosystem Study (NAAMES)

This work presents an overview of a unique set of surface ocean dimethylsulfide (DMS) measurements from four shipboard field campaigns conducted during the North Atlantic Aerosol and Marine Ecosystem Study (NAAMES) project. Variations in surface seawater DMS are discussed in relation to biological and physical observations. Results are considered at a range of timescales (seasons to days) and spatial scales (regional to sub-mesoscale). Elevated DMS concentrations are generally associated with greater biological productivity, although chlorophyll a (Chl) only explains a small fraction of the DMS variability (15%). Physical factors that determine the location of oceanic temperature fronts and depth of vertical mixing have an important influence on seawater DMS concentrations during all seasons. The interplay of biomass and physics influences DMS concentrations at regional/seasonal scales and at smaller spatial and shorter temporal scales. Seawater DMS measurements are compared with the global seawater DMS climatology and predictions made using a recently published algorithm and by a neural network model. The climatology is successful at capturing the seasonal progression in average seawater DMS, but does not reproduce the shorter spatial/temporal scale variability. The input terms common to the algorithm and neural network approaches are biological (Chl) and physical (mixed layer depth, photosynthetically active radiation, seawater temperature). Both models predict the seasonal North Atlantic average seawater DMS trends better than the climatology. However, DMS concentrations tend to be under-predicted and the episodic occurrence of higher DMS concentrations is poorly predicted. The choice of climatological seawater DMS product makes a substantial impact on the estimated DMS flux into the North Atlantic atmosphere. These results suggest that additional input terms are needed to improve the predictive capability of current state-of-the-art approaches to estimating seawater DMS.

54 ENVIRONMENTAL SCIENCES↗

A protocol for calculating basal melt rates in the ISMIP6 Antarctic ice sheet projections

Climate model projections have previously been used to compute ice shelf basal melt rates in ice sheet models, but the strategies employed – e.g., ocean input, parameterization, calibration technique, and corrections – have varied widely and are often ad hoc. Here, a methodology is proposed for the calculation of circum-Antarctic basal melt rates for floating ice, based on climate models, that is suitable for ISMIP6, the Ice Sheet Model Intercomparison Project for CMIP6 (6th Coupled Model Intercomparison Project). The past and future evolution of ocean temperature and salinity is derived from a climate model by estimating anomalies with respect to the modern day, which are added to a present-day climatology constructed from existing observational datasets. Temperature and salinity are extrapolated to any position potentially occupied by a simulated ice shelf. A simple formulation is proposed for a basal melt parameterization in ISMIP6, constrained by the observed temperature climatology, with a quadratic dependency on either the nonlocal or local thermal forcing. Two calibration methods are proposed: (1) based on the mean Antarctic melt rate (MeanAnt) and (2) based on melt rates near Pine Island's deep grounding line (PIGL). Future Antarctic mean melt rates are an order of magnitude greater in PIGL than in MeanAnt. The PIGL calibration and the local parameterization result in more realistic melt rates near grounding lines. PIGL is also more consistent with observations of interannual melt rate variability underneath Pine Island and Dotson ice shelves. This work stresses the need for more physics and less calibration in the parameterizations and for more observations of hydrographic properties and melt rates at interannual and decadal timescales.

54 ENVIRONMENTAL SCIENCES↗

CMIP5 model selection for ISMIP6 ice sheet model forcing: Greenland and Antarctica

Abstract. The ice sheet model intercomparison project for CMIP6 (ISMIP6) effort brings together the ice sheet and climate modeling communities to gain understanding of the ice sheet contribution to sea level rise. ISMIP6 conducts stand-alone ice sheet experiments that use space- and time-varying forcing derived from atmosphere–ocean coupled global climate models (AOGCMs) to reflect plausible trajectories for climate projections. The goal of this study is to recommend a subset of CMIP5 AOGCMs (three core and three targeted) to produce forcing for ISMIP6 stand-alone ice sheet simulations, based on (i) their representation of current climate near Antarctica and Greenland relative to observations and (ii) their ability to sample a diversity of projected atmosphere and ocean changes over the 21st century. The selection is performed separately for Greenland and Antarctica. Model evaluation over the historical period focuses on variables used to generate ice sheet forcing. For stage (i), we combine metrics of atmosphere and surface ocean state (annual- and seasonal-mean variables over large spatial domains) with metrics of time-mean subsurface ocean temperature biases averaged over sectors of the continental shelf. For stage (ii), we maximize the diversity of climate projections among the best-performing models. Model selection is also constrained by technical limitations, such as availability of required data from RCP2.6 and RCP8.5 projections. The selected top three CMIP5 climate models are CCSM4, MIROC-ESM-CHEM, and NorESM1-M for Antarctica and HadGEM2-ES, MIROC5, and NorESM1-M for Greenland. This model selection was designed specifically for ISMIP6 but can be adapted for other applications.

54 ENVIRONMENTAL SCIENCES↗

PMEL Passive Acoustics Research: Quantifying the Ocean Soundscape from Whales to Wave Energy

Passive acoustic monitoring of the global ocean has increased dramatically over the last decade, providing insights into seasonal sea ice and wind/wave variability, biodiversity, geophysical hazards, and anthropogenic noise impacts. All of these phenomena are sentinels of marine ecosystem health and ocean climate change. Recognizing the utility of underwater sound, the Pacific Marine Environmental Laboratory (PMEL) formed a passive acoustic research program with the goal of quantifying deep-ocean and coastal soundscapes in support of NOAA’s mission to conserve and manage marine ecosystems. PMEL Acoustics Program researchers have built a stable of novel ocean technologies, including autonomous stationary hydrophones, mobile platforms, and near-real-time surface buoys with satellite communication capability. These passive acoustic monitoring systems have been deployed in every major ocean basin on Earth, enabling significant advancements in understanding of natural and anthropogenic sounds. This progress includes evaluation of human-made sound levels across US waters, observations of ship noise fluctuations during the COVID-19 pandemic, and evaluation of noise levels from offshore wave-energy devices. Progress in natural sound research includes assessment of seasonal variability in the presence of endangered cetacean species due to population recovery and/or changing ocean temperatures as well as early detection of the collapse of an Antarctic ice shelf.

54 ENVIRONMENTAL SCIENCES↗

SEASAT-A - A user oriented systems design

The SEASAT-A spacecraft is tentatively scheduled for launch in 1978 into a nearly circular orbit with an altitude of approximately 800 km. The spacecraft is to demonstrate a capability for the global monitoring of wave height and spectra, surface winds, ocean temperature, and current patterns. Other objectives include the charting of ice fields and a mapping of the global geoid. The sensors to be carried by the spacecraft are discussed and a description is given of the satellite system and the subsystems.

Mccandless, S. W., Jr.↗

Seasat-A - An ocean observation satellite

Mission details, onboard equipment, and measurements to be taken are described for the Seasat-A global ocean monitoring satellite. The satellite is designed for mapping the global ocean geoid, charting ice fields and leads, precision measurement of sea surface topography, global monitoring of wave height and wave directional spectra, surface winds and wind direction, current patterns, and ocean temperature. Data handling subsystems, a compressed pulse radar altimeter, coherent synthetic aperture imaging radar, microwave wind scatterometer, scanning visible/IR radiometer, scanning multispectral (5 freq) microwave radiometer mounted on the satellite are described briefly.

Williams, F. L.↗

Visible and infrared imaging radiometers for ocean observations

The current status of visible and infrared sensors designed for the remote monitoring of the oceans is reviewed. Emphasis is placed on multichannel scanning radiometers that are either operational or under development. Present design practices and parameter constraints are discussed. Airborne sensor systems examined include the ocean color scanner and the ocean temperature scanner. The costal zone color scanner and advanced very high resolution radiometer are reviewed with emphasis on design specifications. Recent technological advances and their impact on sensor design are examined.

Barnes, W. L.↗

Inversion of passive microwave remote sensing data from satellites

Global passive microwave observations from earth-orbiting satellites have mapped humidity and liquid water over ocean, temperature profiles, ice and snow, and other geophysical parameters. In most applications, the inversion problem is adequately approximated as linear with jointly Gaussian statistics, and, thus, a linear retrieval performs well. In some cases, the problem is typically factored into a decision process followed by appropriate linear or quasilinear processes. Certain problems, however, require more powerful nonlinear or nonstationary procedures, such as Kalman filtering.

Staelin, D. H.↗

Visible and infrared imaging radiometers for ocean observations

The technology of visible and infrared imaging sensors designed for the remote monitoring of the oceans is assessed. Emphasis is placed on multichannel scanning radiometers that are either operational or under development. Present design practices and parameter constraints are discussed. Airborne sensor systems examined include the Ocean Color Scanner (OCS) and the Ocean Temperature Scanner (OTS). The Coastal Zone Color Scanner (CZCS) and Advanced Very High Resolution Radiometer (AVHRR), are reviewed with emphasis on design specifications, expected completion, and anticipated performance. Finally, recent technology advances and their probable impact on sensor design are examined.

Barnes, W. L.↗

Remote sensing for water quality and biological measurements in coastal waters

Recent remote sensing experiments in the United States' coastal waters indicate that certain biological and water quality parameters have distinctive spectral characteristics. Data outputs from remote sensors, to date, include: (1) high resolution measurements to determine concentrations and distributions of total suspended particulates, temperature, salinity, chlorophyll a, and phytoplankton color group associations from airborne and/or satellite platforms, and (2) low resolution measurements of total suspended solids, temperature, ocean color, and possibly chlorophyll from satellite platforms. A summary of platforms, sensors and parameters measured is given. Remote sensing, especially when combined with conventional oceanographic research methods, can be useful in such high priority research areas as estuarine and continental shelf sediment transport dynamics, transport and fate of marine pollutants, marine phytoplankton dynamics, and ocean fronts.

Johnson, R. W.↗

Evaluation and use of TOVS retrievals at NMC

In a current analysis procedure at the National Meteorological Center (NMC), a first guess analysis (from the latest 6 or 12 hour forecast) is updated by new data. In the newest analysis procedures, which are based on optimum interpolation, the observational correction depends on the size of preassigned, expected observational errors versus the size of expected errors in the first guess forecast. In the case of Northern Hemisphere ocean temperatures, the latter are around 2 degrees. The infrared satellite retrievals have a similar size "error". If (as assumed) their errors are uncorrelated with the first guess error, they will improve the analysis. The larger errors of the microwave retrievals, however, mean that they will be given little weight in the analysis. An evaluation of the TIROS-N retrievals is currently underway at NMC to determine the impact of satellite derived data within operational analysis schemes, to isolate possible problems within current retrieval methods, and to offer possible solutions for these problems.

Phillips, N. A.↗

Oceanic Lidar

Instrument concepts which measure ocean temperature, chlorophyll, sediment and Gelbstoffe concentrations in three dimensions on a quantitative, quasi-synoptic basis were considered. Coastal zone color scanner chlorophyll imagery, laser stimulated Raman temperaure and fluorescence spectroscopy, existing airborne Lidar and laser fluorosensing instruments, and their accuracies in quantifying concentrations of chlorophyll, suspended sediments and Gelbstoffe are presented. Lidar applications to phytoplankton dynamics and photochemistry, Lidar radiative transfer and signal interpretation, and Lidar technology are discussed.

Carder, K. L.↗

Papers presented to the Conference on Large Body Impacts and Terrestrial Evolution: Geological, Climatological, and Biological Implications

The effects of large impacts on the environment are discussed and include thermal effects, atmospheric effects, changes in ocean temperatures, and geomagnetic anomalies. Biological factors such as extinction and increases in mutation development were investigated. Geological anomalies studied include stratigraphic gaps, extinction of entire boundary layers from the geological record, and geochemical oddities. Evidence was examined for impact cratering throughout the world.

Source record↗