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At least 145 records · Page 8

Evaluation of survival estimates generated from tracking downstream migrating juvenile sea lamprey ( Petromyzon marinus ) with a miniature acoustic telemetry tag

Fish that undertake juvenile migration pass through habitats that vary in mortality risk. The ability to identify regions of persistently low survival would improve fishery management. We conducted a field study combined with predictive modeling of survival in downstream migrating juvenile sea lamprey using a new micro-acoustic telemetry tag designed for implantation into small, slender-bodied fishes. Detection data were collected from eight receivers placed across a coastal riverine–wetland–lake complex. Juvenile sea lamprey initiated downstream movement near nautical twilight, stopped frequently, and were more likely to move during high river discharge. Estimated survival was highest in the riverine reach, declined through the river–wetland complex, and dropped precipitously in the drowned rivermouth lake. However, the high transmission rate and resulting short battery life of the microtransmitters (as configured) likely resulted in missed detections in the lower reaches. Simulation analyses suggested survival estimation could be improved by increasing the number of tagged lamprey and staggering release locations. We offer practical recommendations for the use of this new transmitter in field studies with small anguilliform fish.

59 BASIC BIOLOGICAL SCIENCES↗

B-flavor tagging at Belle II

We report on new flavor tagging algorithms developed to determine the quark-flavor content of bottom (B) mesons at Belle II. The algorithms provide essential inputs for measurements of quark-flavor mixing and charge-parity violation. We validate and evaluate the performance of the algorithms using hadronic B decays with flavor-specific final states reconstructed in a data set corresponding to an integrated luminosity of 62.8fb -1 , collected at the Υ(4S) resonance with the Belle II detector at the SuperKEKB collider. We measure the total effective tagging efficiency to be ε eff = (30.0 ± 1.2(stat) ± 0.4(syst))% for a category-based algorithm and ε eff = (28.8 ± 1.2(stat) ± 0.4(syst))% for a deep learning-based algorithm.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

ATLAS flavour-tagging algorithms for the LHC Run 2 $pp$ collision dataset

The flavour-tagging algorithms developed by the ATLAS Collaboration and used to analyse its dataset of $\sqrt{s}$ = 13 TeV $pp$ collisions from Run 2 of the Large Hadron Collider are presented. These new tagging algorithms are based on recurrent and deep neural networks, and their performance is evaluated in simulated collision events. These developments yield considerable improvements over previous jet-flavour identification strategies. At the 77% $b$-jet identification efficiency operating point, light-jet (charm-jet) rejection factors of 170 (5) are achieved in a sample of simulated Standard Model $t\bar{t}$ events; similarly, at a $c$-jet identification efficiency of 30%, a light-jet ($b$-jet) rejection factor of 70 (9) is obtained.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Calibration of the light-flavour jet mistagging efficiency of the b -tagging algorithms with Z+jets events using 139 $\textrm{fb}^{-1}$ of ATLAS proton–proton collision data at $\sqrt{s} = 13$ TeV

The identification of b -jets, referred to as b -tagging, is an important part of many physics analyses in the ATLAS experiment at the Large Hadron Collider and an accurate calibration of its performance is essential for high-quality physics results. This publication describes the calibration of the light-flavour jet mistagging efficiency in a data sample of proton–proton collision events at $\sqrt{s} = 13$ TeV corresponding to an integrated luminosity of 139 fb -1 . The calibration is performed in a sample of Z bosons produced in association with jets. Due to the low mistagging efficiency for light-flavour jets, a method which uses modified versions of the b-tagging algorithms referred to as flip taggers is used in this work. A fit to the jet-flavour-sensitive secondary-vertex mass is performed to extract a scale factor from data, to correct the light-flavour jet mistagging efficiency in Monte Carlo simulations, while simultaneously correcting the b -jet efficiency. With this procedure, uncertainties coming from the modeling of jets from heavy-flavour hadrons are considerably lower than in previous calibrations of the mistagging scale factors, where they were dominant. The scale factors obtained in this calibration are consistent with unity within uncertainties.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

A continuous calibration of the ATLAS flavour-tagging classifiers via optimal transportation maps

A calibration of the ATLAS flavour-tagging algorithms using a new calibration procedure based on optimal transportation maps is presented. Simultaneous, continuous corrections to the b-jet, c-jet, and light-flavour jet classification probabilities from jet-tagging algorithms in simulation are derived for b-jets using $t\bar{t} \rightarrow e\mu \nu \nu bb$ data. After application of the derived calibration maps, closure between simulation and observation is achieved for jet flavour observables used in ATLAS analyses of Large Hadron Collider (LHC) Run 2 proton-proton collision data. This continuous calibration opens up new possibilities for the future use of jet flavour information in LHC analyses and also serves as a guide for deriving high-dimensional corrections to simulation via transportation maps, an important development for a broad range of inference tasks.

Aad, G. [Aix-Marseille Université] (ORCID:00000002↗

Understanding the distinct impacts of MCS and non-MCS rainfall on the surface water balance in the central US using a numerical water-tagging technique

Warm-season rainfall associated with mesoscale convective systems (MCSs) in the central US is characterized by higher intensity and nocturnal timing compared to rainfall from non-MCS systems, suggesting their potentially different footprints on the land surface. To differentiate the impacts of MCS and non-MCS rainfall on the surface water balance, a water tracer tool embedded in the Noah land surface model with multi-parameterization options (WT-Noah-MP) is used to numerically “tag” water from MCS and non-MCS rainfall separately during April to August (1997-2018) and track their transit in the terrestrial system. From the water-tagging results, over 50% of warm-season rainfall leaves the surface-subsurface system through evapotranspiration by the end of August, but non-MCS rainfall contributes a larger fraction. However, MCS rainfall plays a more important role in generating surface runoff. These differences are mostly attributed to the rainfall intensity differences. The higher intensity MCS rainfall tends to produce more surface runoff through infiltration excess flow and drives a deeper penetration of the rainwater into the soil. Over 70% of the top 10 percentile runoff is contributed by MCS rainfall, demonstrating its important contribution to local flooding. In contrast, lighter intensity non-MCS rainfall resides mostly in the top layer and contributes more to evapotranspiration through soil evaporation. Diurnal timing of rainfall has negligible effects on the flux partitioning for both MCS and non-MCS rainfall. Differences in soil moisture profiles for MCS and non-MCS rainfall and the resultant evapotranspiration suggest differences in their roles in soil moisture-precipitation feedbacks and ecohydrology.

Hu, Huancui↗

Nitrogen-dependent coordination of cell cycle, quiescence and TAG accumulation in Chlamydomonas

Abstract Microalgae hold great promises as sustainable cellular factories for the production of alternative fuels, feeds, and biopharmaceuticals for human health. While the biorefinery approach for fuels along with the coproduction of high-value compounds with industrial, therapeutic, or nutraceutical applications have the potential to make algal biofuels more economically viable, a number of challenges continue to hamper algal production systems at all levels. One such hurdle includes the metabolic trade-off often observed between the increased yields of desired products, such as triacylglycerols (TAG), and the growth of an organism. Initial genetic engineering strategies to improve lipid productivity in microalgae, which focused on overproducing the enzymes involved in fatty acid and TAG biosynthesis or inactivating competing carbon (C) metabolism, have seen some successes albeit at the cost of often greatly reduced biomass. Emergent approaches that aim at modifying the dynamics of entire metabolic pathways by engineering of pertinent transcription factors or signaling networks appear to have successfully achieved a balance between growth and neutral lipid accumulation. However, the biological knowledge of key signaling networks and molecular components linking these two processes is still incomplete in photosynthetic eukaryotes, making it difficult to optimize metabolic engineering strategies for microalgae. Here, we focus on nitrogen (N) starvation of the model green microalga, Chlamydomonas reinhardtii , to present the current understanding of the nutrient-dependent switch between proliferation and quiescence, and the drastic reprogramming of metabolism that results in the storage of C compounds following N starvation. We discuss the potential components mediating the transcriptional repression of cell cycle genes and the establishment of quiescence in Chlamydomonas, and highlight the importance of signaling pathways such as those governed by the target of rapamycin (TOR) and sucrose nonfermenting-related (SnRK) kinases in the coordination of metabolic status with cellular growth. A better understanding of how the cell division cycle is regulated in response to nutrient scarcity and of the signaling pathways linking cellular growth to energy and lipid homeostasis, is essential to improve the prospects of biofuels and biomass production in microalgae.

09 BIOMASS FUELS↗

Tagged Short-Range Correlations for Medium to Heavy Ions at an Electron Ion Collider

Understanding short-range correlations between pairs of nucleons in the nucleus is an important nuclear physics topic that can address longstanding mysteries in nuclear physics such as the behavior of dense nuclear systems and the modification of parton distributions. As a collider and with a large acceptance detector, the Jefferson Lab version of the Electron Ion Collider has unique capabilities that are complementary to previous short-range correlation studies, most notably the ability to more fully reconstruct the final state. Optimization of the collider’s detector to maximally exploit these capabilities called for important extensions of existing simulation tools. For this one year laboratory directed research and development project, we upgraded the benchmark electron-nucleon event generator for lepto-production simulation code Benchmark eA Generator for LEptoproduction (BeAGLE) to be able to handle tagged medium-to-heavy nucleons. This included updating the code to correctly handle Fermi motion of nucleons in the nucleus as well as the large momentum caused by short-range correlations. In addition, we also investigated the possibility of improved kinematic reconstruction methods for electron nucleon collisions and looked at pair-spectator tagging of short-range correlations with the Jefferson Lab electron ion collider design. The project progressed very much as planned.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Phase Field Sintering Simulations of Tagged UO 2

Isotopic taggants are being considered as an additive for UO 2 manufacturing to improve nuclear security. Before taggants can be adopted, it must be determined whether taggants have any effect on the fuel microstructure or performance. As part of this effort, a grand potential formulation of the phase field method was used to model untagged, Cr-tagged, and Fe-tagged UO 2 . The simulations were compared to determine whether the taggants had any effect on fuel density or grain size. The results suggest that the taggants will not affect the density or grain size, but these findings may not be reliable because of high uncertainty. Causes of the uncertainty were discussed, and future work is proposed to reduce the model uncertainty.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

sPHENIX heavy flavor jet tagging studies in p+p at $\sqrt{s_{NN}}=200~GeV$

Heavy-flavor jets, which are initiated from heavy quarks, are ideal probes for studying flavor dependent parton energy loss. We report on the performance of jet flavor tagging using two Neural Network Machine Learning (ML) models: the Long Short-Term Memory (LSTM) model and an Attention-based Neural Network, in simulations of 200 GeV p + p collisions. The tagging performance of bottom quark initiated jets with both ML models surpasses that of the traditional cut-based method. Technical details, including sample and kinematic variable selections, the machine learning training and testing setup with parameter tuning, and outcome comparisons, will be discussed.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Using data tagging to improve the performance of Kanerva's sparse distributed memory

The standard formulation of Kanerva's sparse distributed memory (SDM) involves the selection of a large number of data storage locations, followed by averaging the data contained in those locations to reconstruct the stored data. A variant of this model is discussed, in which the predominant pattern is the focus of reconstruction. First, one architecture is proposed which returns the predominant pattern rather than the average pattern. However, this model will require too much storage for most uses. Next, a hybrid model is proposed, called tagged SDM, which approximates the results of the predominant pattern machine, but is nearly as efficient as Kanerva's original formulation. Finally, some experimental results are shown which confirm that significant improvements in the recall capability of SDM can be achieved using the tagged architecture.

Rogers, David↗

Freedom System Text and Graphics System (TAGS)

Video (01:51) of the Text and Graphics System (TAGS) is a high-resolution facsimile system that scans text or graphics material and converts the analog SCAN data into serial digital data. This video shows the TAGS in operation.

Sid Clinton↗

Precise Time-Tag Generator For A Local-Area-Network Monitor

Time-tag-generating circuit designed for use in LAN monitor, monitors frames of data transmitted among computers on local-area network (LAN). To each frame of data that LAN monitor receives from LAN, time-tag generator appends ancillary data on time of arrival of frame, precise to within 1 microsecond of centrally generated time signal. Inserts ancillary time data in place of already used frame-check data before frames of data stored in memory of LAN monitor.

Stauffer, David R.↗

Vehicle Tracking System using Nanotechnology Satellites and Tags

This paper describes a joint project to design, develop, and deploy a satellite based tracking system incorporating micro-nanotechnology components. The system consists of a constellation of 'nanosats', a satellite command station and data collection sites, and a large number of low-cost electronic 'tags'. Both government and commercial applications are envisioned for the satellite based tracking system. The projected low price for the tracking service is made possible by the lightweight nanosats and inexpensive electronic tags which use high production volume single chip transceivers and microprocessor devices. The nanosat consists of a five inch aluminum cube with body mounted solar panels (GaAs solar cells) on all six faces. A UHF turnstile antenna and a simple, spring release mechanism complete the external configuration of the spacecraft.

Lorenzini, Dino A.↗

Analysis of STIS time-tag data

Very high time resolution data can be obtained from the Space Telescope Imaging Spectrograph (STIS) Multi-Anode Microchannel Array (MAMA) detectors using the time-tag observing mode. In this mode, the photon events are not accumulated onboard the spacecraft. Instead, each event is recorded internally and transmitted to the ground as an X and Y location with an event time. Event times are recorded in units of 125 microseconds. Analysis of STIS Crab Pulsar data demonstrates that a time resolution of approaching 125 microseconds can be achieved. Furthermore, the time-tag observing mode has been demonstrated to be a very powerful diagnostic tool and can be used to increase the resolution of both imaging and spectral data.

Lindler, Don J.↗

Transposon tagging and the study of root development in Arabidopsis

The maize Ac-Ds transposable element family has been used as the basis of transposon mutagenesis systems that function in a variety of plants, including Arabidopsis. We have developed modified transposons and methods which simplify the detection, cloning and analysis of insertion mutations. We have identified and are analyzing two plant lines in which genes expressed either in the root cap cells or in the quiescent cells, cortex/endodermal initial cells and columella cells of the root cap have been tagged with a transposon carrying a reporter gene. A gene expressed in root cap cells tagged with an enhancer-trap Ds was isolated and its corresponding EST cDNA was identified. Nucleotide and deduced amino acid sequences of the gene show no significant similarity to other genes in the database. Genetic ablation experiments have been done by fusing a root cap-specific promoter to the diphtheria toxin A-chain gene and introducing the fusion construct into Arabidopsis plants. We find that in addition to eliminating gravitropism, root cap ablation inhibits elongation of roots by lowering root meristematic activities.

NASA Discipline Plant Biology↗

Radio Frequency Compatibility of an RFID Tag on Glideslope Navigation Receivers

A process is demonstrated to show compatibility between a radio frequency identification (RFID) tag and an aircraft glideslope (GS) radio r eceiver. The particular tag chosen was previously shown to have significant spurious emission levels that exceeded the emission limit in th e GS aeronautical band. The spurious emissions are emulated in the study by capturing the RFID fundamental transmission and playing back th e signal in the GS band. The signal capturing and playback are achiev ed with a vector signal generator and a spectrum analyzer that can output the in-phase and quadrature components (IQ). The simulated interf erence signal is combined with a GS signal before being injected into a GS receiver#s antenna port for interference threshold determination . Minimum desired propagation loss values to avoid interference are then computed and compared against actual propagation losses for severa l aircraft.

Nguyen, Truong X.↗

Radio Frequency Compatibility of an RFID Tag on Glideslope Navigation Receivers

A process is demonstrated to show compatibility between a radio frequency identification (RFID) tag and an aircraft glideslope (GS) radio receiver. The particular tag chosen was previously shown to have significant peak spurious emission levels that far exceeded the emission limits in the GS aeronautical band. The spurious emissions are emulated in the study by capturing the RFID fundamental transmission and playing back the signal in the GS band. The signal capturing and playback are achieved with a vector signal generator and a spectrum analyzer that can output the in-phase and quadrature components (IQ). The simulated interference signal is combined with a desired GS signal before being injected into a GS receiver s antenna port for interference threshold determination. Minimum desired propagation loss values to avoid interference are then computed and compared against actual propagation losses for several aircraft.

Nguyen, Truong X.↗