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DOE OSTI2022

Beam particle identification and tagging of incompletely stripped heavy beams with HEIST

A challenge preventing successful inverse kinematics measurements with heavy nuclei that are not fully stripped is identifying and tagging the beam particles. For this purpose, the HEavy ISotope Tagger (HEIST) has been developed. HEIST utilizes two micro-channel plate timing detectors to measure the time-of-flight, a multi-sampling ion chamber to measure energy loss, and a high-purity germanium detector to identify isomer decays and calibrate the isotope identification system. HEIST has successfully identified 198 Pb and other nearby nuclei at energies of about 75 MeV/A. In the experiment discussed, a typical cut containing 89% of all 198 Pb 80+ in the beam had a purity of 86%. We examine the issues of charge state contamination. Here, the observed charge state populations of these ions are presented and, using an adjusted beam energy, are well described by the charge state model GLOBAL.

47 OTHER INSTRUMENTATION↗

DOE OSTI2023

How generic is iodide-tagging photoelectron spectroscopy: An extended investigation on the Gly· X - (Gly = glycine, X = Cl or Br) complexes

We report a joint negative ion photoelectron spectroscopy (NIPES) and quantum chemical computational study on glycine-chloride/bromide complexes (denoted Gly·X - , X = Cl/Br) in close comparison to the previously studied Gly·I - cluster ion. Combining experimental NIPE spectra and theoretical calculations, various Gly·X - complexes were found to adopt the same types of low-lying isomers, albeit with different relative energies. Despite more congested spectral profiles for Gly·Cl - and Gly·Br - , spectral assignments were accomplished with the guidance of the knowledge learned from Gly·I - , where a larger spin–orbit splitting of iodine afforded well-resolved, recognizable spectral peaks. Three canonical plus one zwitterionic isomer for Gly·Cl - and four canonical conformers for Gly·Br - were experimentally identified and characterized in contrast to the five canonical ones observed for Gly·I - under similar experimental conditions. Taken together, this study investigates both genericity and variations in binding patterns for the complexes composed of glycine and various halides, demonstrating that iodide-tagging is an effective spectroscopic means to unravel diverse ion-molecule binding motifs for cluster anions with congested spectral bands by substituting the respective ion with iodide.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2023

Fast b -tagging at the high-level trigger of the ATLAS experiment in LHC Run 3

The ATLAS experiment relies on real-time hadronic jet reconstruction and b-tagging to record fully hadronic events containing b-jets. These algorithms require track reconstruction, which is computationally expensive and could overwhelm the high-level-trigger farm, even at the reduced event rate that passes the ATLAS first stage hardware-based trigger. In LHC Run 3, ATLAS has mitigated these computational demands by introducing a fast neural-network-based b-tagger, which acts as a low-precision filter using input from hadronic jets and tracks. It runs after a hardware trigger and before the remaining high-level-trigger reconstruction. This design relies on the negligible cost of neural-network inference as compared to track reconstruction, and the cost reduction from limiting tracking to specific regions of the detector. In the case of Standard Model HH → bb̅bb̅, a key signature relying on b-jet triggers, the filter lowers the input rate to the remaining high-level trigger by a factor of five at the small cost of reducing the overall signal efficiency by roughly 2%.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

DOE OSTI2023

Conceptual study of a two-layer silicon pixel detector to tag the passage of muons from cosmic sources through quantum processors

Abstract Recent studies in quantum computing have shown that quantum error correction with large numbers of physical qubits are limited by ionizing radiation from high-energy particles. Depending on the physical setup of the quantum processor, the contribution of muons from cosmic sources can constitute a significant fraction of these interactions. As most of these muons are difficult to stop, we perform a conceptual study of a two-layer silicon pixel detector to tag their hits on a solid-state quantum processor instead. With a typical dilution refrigerator geometry model, we find that efficiencies greater than 50% are most likely to be achieved if at least one of the layers is operated at the deep-cryogenic (<1 K) flanges of the refrigerator. Following this finding, we further propose a novel research program that could allow the development of silicon pixel detectors that are fast enough to provide input to quantum error correction algorithms, can operate at deep-cryogenic temperatures, and have very low power consumption.

Instruments & Instrumentation↗

DOE OSTI2025

Time-tagging data acquisition system for testing superconducting electronics based on an RFSoC and custom analog frontend

Novel electronic devices can often be operated in a plethoraof ways, which makes testing circuits comprised of them difficult.Often, no single tool can simultaneously analyze the operatingmargins, maximum speed, and failure modes of a circuit, particularlywhen the intended behavior of subcomponents of the circuit is notstandardized. This work demonstrates a cost-effective time-domaindata acquisition system for electronic circuits that enables moreintricate verification techniques than are practical withconventional experimental setups. We use high-speeddigital-to-analog converters and real-timemulti-gigasample-per-second waveform processing to push experimentalcircuits beyond their maximum operating speed. Our customtime-tagging data capture firmware reduces memory requirements andcan be used to determine when errors occur. The firmware iscombined with a thermal-noise-limited analog frontend with50 dB of dynamic range. Compared to currentlyavailable commercial test equipment that is seven times moreexpensive, this data acquisition system was able to operate asuperconducting shift register at a nearly three-times-higher clockfrequency (200 MHz vs. 80 MHz).

Foster, Reed A. [MIT] (ORCID:0000000231002127)↗

DOE OSTI2025

Measurement of 𝐵 + →𝜏 + ⁢𝜈 𝜏 branching fraction with a hadronic tagging method at Belle II

We present a measurement of the branching fraction of 𝐵 + →𝜏 + ⁢𝜈 𝜏 decays using 387±6×10 6 ϒ⁡(4⁢𝑆) collected between 2019 and 2022 with the Belle II detector at the SuperKEKB 𝑒 + ⁢𝑒 − collider. We reconstruct the accompanying 𝐵 − meson using the hadronic tagging method, while 𝐵 + →𝜏 + ⁢𝜈 𝜏 candidates are identified in the recoil. We find evidence for 𝐵 + →𝜏 + ⁢𝜈 𝜏 decays at 3.0 standard deviations, including systematic uncertainties. The measured branching fraction is ℬ⁡(𝐵 + →𝜏 + ⁢𝜈 𝜏 )=[1.24±0.41⁢(stat)±0.19⁢(syst)]×10 −4 .

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2023

Search for narrow resonances in the b -tagged dijet mass spectrum in proton-proton collisions at s = 13 TeV

A search is performed for narrow resonances decaying to final states of two jets, with at least one jet originating from a b quark, in proton-proton collisions at s = 13 TeV . The data set corresponds to an integrated luminosity of 138 fb - 1 collected with the CMS detector at the LHC. Jets originating from energetic b hadrons are identified through a b -tagging algorithm that utilizes a deep neural network or the presence of a muon inside a jet. The invariant mass spectrum of jet pairs is well described by a smooth parametrization and no evidence for the production of new particles is observed. Upper limits on the production cross section are set for excited b quarks and other resonances decaying to dijet final states containing b quarks. These limits exclude at 95% confidence level models of Z ' bosons with masses from 1.8 TeV to 2.4 TeV and of excited b quarks with masses from 1.8 TeV to 4.0 TeV. This is the most stringent exclusion of excited b quarks to date.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

DOE OSTI2024

Differentiable vertex fitting for jet flavor tagging

This work explores the use of differentiable programming to integrate domain knowledge, in the form of domain specific software, into neural networks to develop scientific machine learning systems. We propose a differentiable vertex fitting algorithm that estimates the crossing point of multiple curves. In the high energy physics setting, these curves are defined by particle equations of motion and the crossing point represents the origin of particle production. This differentiable vertex fitting algorithm can be seamlessly integrated into neural networks, and we show its utility and efficacy in the high energy physics application of the classification of jets, i.e., collimated streams of particles in particle detectors whose originating parent particle we aim to classify. We demonstrate how differentiable vertex fitting can be integrated into larger transformer-based models for jet flavor tagging and show improvements in heavy flavor jet classification when compared to baseline models. Published by the American Physical Society 2024

Smith, Rachel E. C. (ORCID:0000000335851262)↗

DOE OSTI2023

Utility of parentage‐based tagging for monitoring Coho salmon ( Oncorhynchus kisutch ) in the interior Columbia River basin

Abstract By the 1980s, after decades of declining numbers in the mid‐1900s, Coho salmon ( Oncorhynchus kisutch ) were considered extirpated from the interior Columbia River. In the mid‐1990s, the Confederated Tribes of the Umatilla Indian Reservation, the Confederated Tribes and Bands of the Yakama Nation, and the Nez Perce Tribe began successful reintroduction programs of Coho salmon upstream of Bonneville Dam, but which were initially sourced from lower Columbia River hatcheries. Here we present the first Coho salmon parentage‐based tagging (PBT) baseline from seven hatchery programs located in the interior Columbia River basin, and two sites at or downstream of Bonneville Dam, composed of over 32,000 broodstock samples. Analyses of baseline collections revealed that genetic structure followed a temporal pattern based on 3‐year broodlines rather than geographic location or stocking history. Across hatchery programs, similar levels of genetic diversity was present. The PBT baseline provided multiple direct applications such as identification of origin for Coho salmon collected in a mixed stock at Priest Rapids Dam and the detection of the proportion and distribution of hatchery‐origin fish on the spawning grounds in the Methow River basin. The PBT baseline for Coho salmon is freely available for use and can be downloaded from FishGen.net .

Horn, Rebekah L.↗

DOE OSTI2025

An archaeal genetic code with all TAG codons as pyrrolysine

Multiple genetic codes developed during the evolution of eukaryotes and bacteria, yet no alternative genetic code is known for archaea. We used proteomics to confirm our prediction that certain archaea consistently incorporate pyrrolysine (Pyl) at TAG codons, supporting an alternative archaeal genetic code that we designate the Pyl code. This genetic code has 62 sense codons encoding 21 amino acids. In contrast to monophyletic genetic code distributions in bacteria, the archaeal Pyl code occurs sporadically, indicating that it arose independently in multiple lineages. We discovered that more than 1800 archaeal proteins contain Pyl, increasing the number of such proteins by two orders of magnitude. Additionally, five Pyl transfer RNA (tRNA) pyrrolysyl–tRNA synthetase pairs from Pyl-code archaea were used to introduce Pyl analogs into proteins in Escherichia coli.

Kivenson, Veronika [University of California, Berk↗

DOE OSTI2022

Complete Genome Sequences of the Soil Oxalotrophic Bacterium Cupriavidus oxalaticus Strain Ox1 and Its Derived mCherry-Tagged Strain

Here, we report the complete genome sequences of the soil oxalotrophic bacterium Cupriavidus oxalaticus Ox1 and a derived mCherry-tagged strain. The genome size is approximately 6.69 Mb, with a GC content of 66.9%. The genome sequence of C. oxalaticus Ox1 contains a complete operon for the degradation and assimilation of oxalate.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2024

Tagged deep inelastic scattering measurement on deuterium with the LAD experiment

Here, the origin of the modification of the quark structure of nucleons in the nuclear medium can be tested with tagged recoil nucleon measurements from deep inelastic scattering off electrons on deuterium. The LAD experiment at the Thomas Jefferson National Laboratory (JLab) will measure the modification of the neutron structure function for high-momentum, highly-virtual neutrons by measuring the spectator recoil protons in coincidence with the scattered electron. An update on the experimental setup and projected results is presented. The experiment will collect data in Fall 2024.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

DOE OSTI2020

Tracking moisture sources of precipitation over Central Asia: A study based on the water-source-tagging method

Central Asia is a semi-arid to arid region that is sensitive to hydrological changes. We use the Community Atmosphere Model version 5 (CAM5), equipped with a water tagging capability, to investigate the major moisture sources for climatological precipitation and its long-term trends over Central Asia. Europe, the north Atlantic and local evaporation, which explain 33.2±1.5%, 23.0±2.5% and 19.4±2.2% of the precipitation, respectively, are identified as the most dominant moisture sources for northern Central Asia (NCA). For precipitation over southern Central Asia (SCA), Europe, the north Atlantic and local evaporation contributes 25.4±2.7%, 18.0±1.7% and 14.7±1.9%, respectively. In addition, the contributions of South Asia (8.6±1.7%) and Indian Ocean (9.5±2.0%) are also substantial for SCA. Modulated by the seasonal meridional shift of subtropical westerly jet, moisture originating from low- and mid-latitude is important in winter, spring and autumn, while northern Europe contributes more in summer. We also explain the observed drying trends over southeastern Central Asia in spring and over NCA in summer during 1956-2005. The drying trend over the southeastern Central Asia in spring is mainly due to the decrease of local evaporation and weakened moisture fluxes from the Arabian Peninsula and Arabian Sea associated with the warming Western Pacific. The drying trend over NCA in summer can be attributed to the decrease of local evaporation and reduced moisture from northern Europe due to the southward shift of the subtropical westerly jet.

Jiang, Jie↗

DOE OSTI2021

OWD.2 TAG Expression

During the transformation of wild-type (WT) Arabidopsis thaliana, a T-DNA containing OLEOSIN-GFP (OLE1-GFP) was inserted by happenstance within the GBSS1 gene, resulting in significant reduction in amylose and increase in leaf oil content in the transgenic line (OG). The synergistic effect on oil accumulation of combining gbss1 with the expression of OLE1-GFP was confirmed by transforming an independent gbss1 mutant (GABI_914G01) with OLE1-GFP. The resulting OLE1-GFP/gbss1 transgenic lines showed higher leaf oil content than the individual OLE1-GFP/WT or single gbss1 mutant lines. Further stacking of the lipogenic factors WRINKLED1, Diacylglycerol O-Acyltransferase (DGAT1), and Cys-OLEOSIN1 (an engineered sesame OLEOSIN1) in OG significantly elevated its oil content in mature leaves to 2.3% of dry weight, which is 15 times higher than that in WT Arabidopsis. Inducible expression of the same lipogenic factors was shown to be an effective strategy for triacylglycerol (TAG) accumulation without incurring growth, development, and yield penalties.

Biomass Analytics↗

DOE OSTI2025

Hypersonic wake velocity measurements using acetone molecular tagging velocimetry

Molecular tagging velocimetry, a minimally intrusive laser diagnostic, was used to find quantitative off-body velocity measurements in the wake of both strut-mounted and free-flight spheres in hypersonic flow. Acetone gas seeded in the flow was excited using the fourth harmonic of a pulse-burst Nd:YAG laser. The experimental tests were validated and compared to simulations using a continuous Galerkin flow solver and an adaptive mesh refinement process. Near the centerline in the wake of the sphere, velocities between −105 and 65 m/s were observed due to reverse flow in the viscous shear layer. Similarly, the simulated data showed negative velocity values in the shear layer region. Outside of the shear layer, average velocities of 730 m/s were observed in both the experimental and simulated results. The overall average uncertainty for the strut-mounted and free-flight cases was estimated to have an accuracy of ±4% (±35.5m/s or 4.9%). In conclusion, this non-intrusive technique provides a velocity map of the wake behind a sphere under hypersonic conditions.

42 ENGINEERING↗

DOE OSTI2025

Nitric oxide molecular tagging velocimetry of a free-flight model in a reflected shock tunnel

Nitric oxide molecular tagging velocimetry (NO MTV) is used to characterize the wake behind a free-flight spherical model in the test section of a free-piston reflected shock tunnel using a burst-mode laser operated at 100 kHz. A novel (to our knowledge) multi-delay timing scheme was implemented to measure velocity in a varying collisional environment in the wake of the free-flight model. Four simultaneous velocity profiles were measured in the wake of the model from -600 to 3600 m/s for flow enthalpies of 10.3 and 12.0 MJ/kg. Finally, the measured velocity distributions show good agreement when compared to computational fluid dynamics (CFD) modeling.

47 OTHER INSTRUMENTATION↗

DOE OSTI2024

Utah FORGE 9-3664: Development of Tagged Proppant for Conductivity Enhancement and Reservoir Characterization - 2024 Annual Workshop Presentation

This is a presentation on the Development and Testing of Tagged Proppant for Fracture Conductivity Enhancement and Reservoir Characterization in EGS by The University of Oklahoma, presented by Ahmad Ghassemi. This slide presentation video discusses the development and testing of new proppants that can be used in geothermal conditions of at least 250 degrees C and at differential pressures of 35-70 MPa. This presentation was featured in the Utah FORGE R&D Annual Workshop on August 13-15, 2024.

15 GEOTHERMAL ENERGY↗

DOE OSTI2024

Data analysis in the ICARUS (SBN FD) Cosmic Ray Tagging system

When a cosmic ray particle collides with the upper atmosphere, it creates a shower of particles that transverse down to the Earth’s surface. These cosmogenic particles provide a challenging background in neutrino experiments. The Short Baseline Neutrino (SBN) Program is composed of three Liquid Argon Time Projection Chambers (LArTPCs) that will help us understand the elusive neutrino. Together with a Cosmic Ray Tagger (CRT) system, the ICARUS detector serves as the Far Detector in the SBN Program. The CRT surrounds the detector medium and tags incoming particles allowing us to combat the high flux of comic rays we experience at ICARUS. In this poster, I will show some of the first data analyses done with the fully commissioned CRT system, including studies using CRT timing information and CRT hit reconstruction.

43 PARTICLE ACCELERATORS↗