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NASA NTRS1997

Studies of Intercellular Communication and Intracellular Metabolic Responses by Bone Cells to Simulated Weightlessness

Spaceflight affects the weight bearing skeletal tissues by reducing the rate of new bone formation. This effect on the long bones of flown rats has been quantitated but the effect at the cellular level and the mechanism(s) involved are not understood. We are applying electron microscopy, coupled with histochemistry and immunocytochemistry to determine the cellular functions most affected by spaceflight. The emphasis for study of these samples from SLS-1, a 9-day mission, is on the histochemical and structural changes of the endosteal and perivascular osteoblasts found in diaphyseal bone of femur and tibia. Work is still in progress but some findings are described: (1) An expected decrease in alkaline phosphatase activity in osteoblasts from flight animals, but an increase in enzyme activity in the stromal stem cells adjacent to the osteoblast. (2) An increase in osteoclastic TRAP activity in the trabecular bone region in response to spaceflight. (3) A large increase in procollagen containing secretory granules in osteoblasts in the recovery group, and a significant decrease in granule numbers in the flight group.

Doty, Stephen B.↗

NASA NTRS1997

CINTEX: International Interoperability Extensions to EOSDIS

A large part of the research under this cooperative agreement involved working with representatives of the DLR, NASDA, EDC, and NOAA-SAA data centers to propose a set of enhancements and additions to the EOSDIS Version 0 Information Management System (V0 IMS) Client/Server Message Protocol. Helen Conover of ITSL led this effort to provide for an additional geographic search specification (WRS Path/Row), data set- and data center-specific search criteria, search by granule ID, specification of data granule subsetting requests, data set-based ordering, and the addition of URLs to result messages. The V0 IMS Server Cookbook is an evolving document, providing resources and information to data centers setting up a VO IMS Server. Under this Cooperative Agreement, Helen Conover revised, reorganized, and expanded this document, and converted it to HTML. Ms. Conover has also worked extensively with the IRE RAS data center, CPSSI, in Russia. She served as the primary IMS contact for IRE-CPSSI and as IRE-CPSSI's liaison to other members of IMS and Web Gateway (WG) development teams. Her documentation of IMS problems in the IRE environment (Sun servers and low network bandwidth) led to a general restructuring of the V0 IMS Client message polling system. to the benefit of all IMS participants. In addition to the IMS server software and documentation. which are generally available to CINTEX sites, Ms. Conover also provided database design documentation and consulting, order tracking software, and hands-on testing and debug assistance to IRE. In the final pre-operational phase of IRE-CPSSI development, she also supplied information on configuration management, including ideas and processes in place at the Global Hydrology Resource Center (GHRC), an EOSDIS data center operated by ITSL.

Graves, Sara J.↗

NASA NTRS1999

Development of Fuzzy Logic and Soft Computing Methodologies

Our earlier research on computing with words (CW) has led to a new direction in fuzzy logic which points to a major enlargement of the role of natural languages in information processing, decision analysis and control. This direction is based on the methodology of computing with words and embodies a new theory which is referred to as the computational theory of perceptions (CTP). An important feature of this theory is that it can be added to any existing theory - especially to probability theory, decision analysis, and control - and enhance the ability of the theory to deal with real-world problems in which the decision-relevant information is a mixture of measurements and perceptions. The new direction is centered on an old concept - the concept of a perception - a concept which plays a central role in human cognition. The ability to reason with perceptions perceptions of time, distance, force, direction, shape, intent, likelihood, truth and other attributes of physical and mental objects - underlies the remarkable human capability to perform a wide variety of physical and mental tasks without any measurements and any computations. Everyday examples of such tasks are parking a car, driving in city traffic, cooking a meal, playing golf and summarizing a story. Perceptions are intrinsically imprecise. Imprecision of perceptions reflects the finite ability of sensory organs and ultimately, the brain, to resolve detail and store information. More concretely, perceptions are both fuzzy and granular, or, for short, f-granular. Perceptions are f-granular in the sense that: (a) the boundaries of perceived classes are not sharply defined; and (b) the elements of classes are grouped into granules, with a granule being a clump of elements drawn together by indistinguishability, similarity. proximity or functionality. F-granularity of perceptions may be viewed as a human way of achieving data compression. In large measure, scientific progress has been, and continues to be, driven by a quest to progress from perceptions to measurements. Pursuit of this aim has led to brilliant successes. But alongside the successes stand problems whose solutions are not in sight. Representative of such problems is the problem of automation of driving in city traffic. In this case, as in many others, what can be done with ease by humans - without any measurements and a computations - is an intractable task for machines.

Zadeh, L. A.↗

NASA NTRS1999

The Photospheric Convection Spectrum

Spectra of the cellular photospheric flows are determined from observations acquired by the MDI instrument on the SOHO spacecraft. Spherical harmonic spectra are obtained from the full-disk observations. Fourier spectra are obtained from the high-resolution observations. The p-mode oscillation signals and instrumental artifacts are reduced by temporal filtering of the Doppler data. The resulting spectra give power (kinetic energy) per wavenumber for effective spherical harmonic degrees from 1 to over 3000. The spectra show distinct peaks representing granules and supergranules but no distinct features at wavenumbers representative of mesogranu;es or giant cells. The observed cellular patterns and spectra are well represented by a model that only includes granules and supergranules.

Hathaway, D. H.↗

NASA NTRS2001

Gridded Hourly Text Products: A TRMM Data Reduction Approach

The quantity of precipitation data from satellite-based observations is a blessing and a curse. The sheer volume of the data makes it difficult for many researchers to use in targeted applications. This volume increases further as algorithm improvements lead to the reprocessing of mission data. In addition to the overall volume of data, the size and format complexity of orbital granules contribute to the difficulty in using all the available data. Finally, the number of different instruments available to measure rainfall and related parameters further contributes to the volume concerns. In summary, we have an embarrassment of riches. The science team of the Tropical Rainfall Measuring Mission (TRMM) recognized this dilemma and has developed a strategy to address it. The TRMM Science Data and Information System (TSDIS) produces, at the direction of the Joint TRMM Science Team, a number of instantaneous rainfall products. The TRMM Microwave Imager (TMI), the Precipitation Radar and a Combined TMI/PR are the key "instruments" used in this production. Each of these products contains an entire orbit of data. The algorithm code computes not just rain rates but a large number of other physical parameters as well as information needed for monitoring algorithm performance. That makes these products very large. For example, a single orbit of TMI rain rate product is 99 MB, a single orbit of the combined product yields a granule that is 158 MB, while the 80 vertical levels of rain information from the PR yields an orbital product of 253 MB. These are large products that are often difficult for science users to electronically transfer to their sites especially if they want a large period of time. Level 3 gridded products are much smaller, but their 5 or 30 day temporal resolution is insufficient for many researchers. In addition, TRMM standard products are produced in the HDF format. While a large number of user-friendly tools are available to hide the details of the format (including a toolkit developed at TSDIS for the TRMM science team), many potential users shy away

Stocker, Erich↗

NASA NTRS2001

Observations Regarding Small Eolian Dunes and Large Ripples on Mars

Eolian bedforms occur at the interface between a planetary surface and its atmosphere; they present a proxy record of the influence of climate, expressed in sediment transport, over that surface. High resolution images (1.5 - 12 m/pixel) from the Mars Global Surveyor (MGS) Mars Orbiter Camera provide glimpses of the most recent events shaping the martian landscape. Thousands of images exhibit small transverse dunes or large eolian ripples that have crest-to-crest spacings of 10 to 60 m, heights of a few to 10 m. Bedforms of the size and patterns seen in the Mars photographs are rarely described among Earth's eolian landforms; in terms of size and morphology, most of these fall between traditional definitions of "ripples" and "dunes". Dunes are composed chiefly of materials transported by saltation, ripples are smaller forms moved along by the impact of saltating grains (traction). The largest reported eolian ripples on Earth (granule ripples, megaripples) are typically smaller than the bedforms observed on Mars; likewise, most dunes are typically larger. The small dunes and large ripples on Mars come in a variety of relative albedos, despite an early MGS impression that they are all of high albedo. Some ripples occur on the surfaces of sand dunes; these are most likely true granule ripples. However, most of these bedforms occur in troughs, pits, craters, and on deflated plains. Despite impressions early in the MGS mission, they do not occur everywhere (e.g., they are rare on the northern plains) but they do occur at a range of elevations from the highest volcanoes to the deepest basins. Where they occur on a hard substrate among larger sand dunes, the big dunes have over-ridden the smaller bedforms, indicating that the smaller features are older and perhaps indurated or very coarse-grained. At other locales, the small bedforms have been mantled by material settled from suspension, in other cases they are being exhumed and may be lithified. Still other examples are peppered with small impact craters, implying considerable age. These bedforms present a complicated record of the geologically-recent past, one that has involved changes in climate, sediment transport capabilities, and sediment sources and sinks over time.

Edgett, Kenneth S.↗

NASA NTRS2003

Solar Coronal Heating and the Magnetic Flux Content of the Network

We investigate the heating of the quiet corona by measuring the increase of coronal luminosity with the amount of magnetic flux in the underlying network at solar minimum when there were no active regions on the face of the Sun. The coronal luminosity is measured from Fe IX/X-Fe XII pairs of coronal images from SOHO/EIT. The network magnetic flux content is measured from SOHO/MDI magnetograms. We find that the luminosity of the corona in our quiet regions increases roughly in proportion to the square root of the magnetic flux content of the network and roughly in proportion to the length of the perimeter of the network magnetic flux clumps. From (1) this result, (2) other observations of many fine-scale explosive events at the edges of network flux clumps, and (3) a demonstration that it is energetically feasible for the heating of the corona in quiet regions to be driven by explosions of granule-sized sheared-core magnetic bipoles embedded in the edges of network flux clumps, we infer that in quiet regions that are not influenced by active regions the corona is mainly heated by such magnetic activity in the edges of the network flux clumps. Our observational results together with our feasibility analysis allow us to predict that (1) at the edges of the network flux clumps there are many transient sheared-core bipoles of the size and lifetime of granules and having transverse field strengths greater than approximately - 100 G, (2) approximately 30 of these bipoles are present per supergranule, and (3) most spicules are produced by explosions of these bipoles.

Moore, R. L.↗

NASA NTRS2003

Solar Coronal Heating and the Magnetic Flux Content of the Network

We investigate the heating of the quiet corona by measuring the increase of coronal luminosity with the amount of magnetic flux in the underlying network at solar minimum when there were no active regions on the face of the Sun. The coronal luminosity is measured from Fe IX/X-Fe XII pairs of coronal images from SOHO/EIT. The network magnetic flux content is measured from SOHO/MDI magnetograms. We find that the luminosity of the corona in our quiet regions increases roughly in proportion to the square root of the magnetic flux content of the network and roughly in proportion to the length of the perimeter of the network magnetic flux clumps. From (1) this result, (2) other observations of many fine-scale explosive events at the edges of network flux clumps, and (3) a demonstration that it is energetically feasible for the heating of the corona in quiet regions to be driven by explosions of granule-sized sheared-core magnetic bipoles embedded in the edges of network flux clumps, we infer that in quiet regions that are not influenced by active regions the corona is mainly heated by such magnetic activity in the edges of the network flux clumps. Our observational results together with our feasibility analysis allow us to predict that (1) at the edges of the network flux clumps there are many transient sheared-core bipoles of the size and lifetime of granules and having transverse field strengths > approx. 100 G, (2) approx. 30 of these bipoles are present per supergranule, and (3) most spicules are produced by explosions of these bipoles.

Falconer, D. A.↗

NASA NTRS2003

Coronal Heating, Spicules, and Solar-B

Falconer et al. investigated the heating of the quiet corona by measuring the increase of coronal luminosity with the amount of the magnetic flux in the underlying network at solar minimum when there were no active regions on the face of the Sun. The coronal luminosity was measured from Fe IX/X - Fe XII pairs of coronal images from SOHO/EIT, under the assumption that practically all of the coronal luminosity in these very quiet regions came from plasma in the temperature range 0.9 x 10(exp 6) K is less than or equal to T is less than or equal to 1.3 x 10(exp 6) K. The network magnetic flux content was measured from SOHO/MDI magnetograms. It was found that luminosity of the corona in these quiet regions increased roughly in proportion to the square root of the magnetic flux content of the network and roughly in proportion to the length of the perimeter of the network flux clumps. From 1) this result; 2) the observed occurrence of many fine-scale explosive events (e.g., spicules) at the edges of network flux clumps; and 3) a demonstration that it is energetically feasible for the heating of the corona in quiet regions to be driven by explosions of granule-sized sheared-core magnetic bipoles embedded in the edges of the network flux clumps, Falconer et al. infer that in quiet regions that are not influenced by active regions the corona is mainly heated by such magnetic activity in the edges of the network flux clumps. From their observational results together with their feasibility analysis, Falconer et al. predict that 1) At the edges of the network flux clumps there are many transient sheared core bipoles of the size and lifetime of granules and having transverse field strengths greater than approx. 100 G; 2) Approx. 30 of these bipoles are present per supergranule; and 3) Most spicules are produced by explosions of these bipoles. The photospheric vector magnetograms, chromospheric filtergrams, and EUV spectra from Solar-B are expected to have sufficient sensitivity, spatial resolution, and cadence to test these predictions. The Falconer et al. (2003) inferred mixed-polarity magnetic flux at the base of spicules is compatible with the observed magnetic structure of Ha macrospicules recently found by Yamuchi et al. (2003).

Moore, Ron↗

NASA NTRS1993

Liquid crystalline order in mucus

Mucus plays an exceptionally wide range of important biological roles. It operates as a protective, exchange, and transport medium in the digestive, respiratory, and reproductive systems of humans and other vertebrates. Mucus is a polymer hydrogel. It is secreted as discrete packages (secretory granules) by specialized secretory cells. Mucus hydrogel is stored in a condensed state inside the secretory granules. Depending upon the architecture of their constituent macromolecules and on the composition of the solvent, polymer gels can form liquid crystalline microstructures, with orientational order being exhibited over optically resolvable distances. Individual mucin molecules consist of alternating rigid segments (heavily glycosylated; hydrophilic) and flexible segments (nonglycosylated; hydrophobic). Polymer molecules consisting of rigid units linked by flexible spacers are frequently associated with liquid crystalline behavior, which again raises the possibility that mucus could form anisotropic fluid phases. Suggestions that mucins may be self-associating in dilute solution have previously been challenged on the basis of sedimentation-equilibrium studies performed on mucus in which potential sites of association were competitively blocked with inhibitors. However, the formation of stable liquid crystalline phases does not depend on the existence of inter- or intramolecular associations; these phases can form on the basis of steric considerations alone.

NASA Discipline Number 40-20↗

NASA NTRS1988

Cytoplasmic membrane changes during adaptation of the fresh water cyanobacterium Synechococcus 6311 to salinity

In this investigation, changes were characterized in cell structure and cytoplasmic membrane organization that occur when the freshwater cyanobacterium Synechococcus 6311 is transferred from 'low salt' (0.03 molar NaCl) to 'high salt' (0.5 molar NaCl) media (i.e. sea water concentration). Cells were examined at several time points after the imposition of the salt stress and compared to control cells, in thin sections and freeze fracture electron microscopy, and by flow cytometry. One minute after exposure to high salt, i.e. 'salt shock', virtually all intracellular granules disappeared, the density of the cytoplasm decreased, and the appearance of DNA material was changed. Glycogen and other granules, however, reappeared by 4 hours after salt exposure. The organization of the cytoplasmic membrane undergoes major reorganization following salt shock. Freeze-fracture electron microscopy showed that small intramembrane particles (diameter 7.5 and 8.5 nanometers) are reduced in number by two- to fivefold, whereas large particles, (diameters 14.5 and 17.5 nanometers) increase two- to fourfold in frequency, compared to control cells grown in low salt medium. The changes in particle size distribution suggest synthesis of new membrane proteins, in agreement with the known increases in respiration, cytochrome oxidase, and sodium proton exchange activity of the cytoplasmic membrane.

NASA Discipline Number 61-10↗

NASA NTRS2004

The Impact of Subsampling on MODIS Level-3 Statistics of Cloud Optical Thickness and Effective Radius

The MODIS Level-3 optical thickness and effective radius cloud product is a gridded l deg. x 1 deg. dataset that is derived from aggregation and subsampling at 5 km of 1 km, resolution Level-2 orbital swath data (Level-2 granules). This study examines the impact of the 5 km subsampling on the mean, standard deviation and inhomogeneity parameter statistics of optical thickness and effective radius. The methodology is simple and consists of estimating mean errors for a large collection of Terra and Aqua Level-2 granules by taking the difference of the statistics at the original and subsampled resolutions. It is shown that the Level-3 sampling does not affect the various quantities investigated to the same degree, with second order moments suffering greater subsampling errors, as expected. Mean errors drop dramatically when averages over a sufficient number of regions (e.g., monthly and/or latitudinal averages) are taken, pointing to a dominance of errors that are of random nature. When histograms built from subsampled data with the same binning rules as in the Level-3 dataset are used to reconstruct the quantities of interest, the mean errors do not deteriorate significantly. The results in this paper provide guidance to users of MODIS Level-3 optical thickness and effective radius cloud products on the range of errors due to subsampling they should expect and perhaps account for, in scientific work with this dataset. In general, subsampling errors should not be a serious concern when moderate temporal and/or spatial averaging is performed.

Oreopoulos, Lazaros↗

NASA NTRS1996

A mechanism of adaptation to hypergravity in the statocyst of Aplysia californica

The gravity-sensing organ of Aplysia californica consists of bilaterally paired statocysts containing statoconia, which are granules composed of calcium carbonate crystals in an organic matrix. In early embryonic development, Aplysia contain a single granule called a statolith, and as the animal matures, statoconia production takes place. The objective of this study was to determine the effect of hypergravity on statoconia production and homeostasis and explore a possible physiologic mechanism for regulating this process. Embryonic Aplysia were exposed to normogravity or 3 x g or 5.7 x g and each day samples were analyzed for changes in statocyst, statolith, and body dimensions until they hatched. In addition, early metamorphosed Aplysia (developmental stages 7-10) were exposed to hypergravity (2 x g) for 3 weeks, and statoconia number and statocyst and statoconia volumes were determined. We also determined the effects of hypergravity on statoconia production and homeostasis in statocysts isolated from developmental stage 10 Aplysia. Since prior studies demonstrated that urease was important in the regulation of statocyst pH and statoconia formation, we also evaluated the effect of hypergravity on urease activity. The results show that hypergravity decreased statolith and body diameter in embryonic Aplysia in a magnitude-dependent fashion. In early metamorphosed Aplysia, hypergravity decreased statoconia number and volume. Similarly, there was an inhibition of statoconia production and a decrease in statoconia volume in isolated statocysts exposed to hypergravity in culture. Urease activity in statocysts decreased after exposure to hypergravity and was correlated with the decrease in statoconia production observed. In short, there was a decrease in statoconia production with exposure to hypergravity both in vivo and in vitro and a decrease in urease activity. It is concluded that exposure to hypergravity downregulates urease activity, resulting in a significant decrease in the formation of statoconia.

NASA Program Space Biology↗

NASA NTRS1993

Composite, large spirochetes from microbial mats: spirochete structure review

Phenomena previously unknown in free-living spirochetes are reported: large-sized cells with variable diameter (length to 100 microns, width between 0.4 and 3.0 microns), composite structure (smaller spirochetes inside larger ones), and positive phototropic behavior. These bacteria, Spirosymplokos, are compared with all other spirochete genera. The large spirochete, grown in mixed culture, was studied live and by transmission EM. The protoplasmic cylinder was replete with spherical granules 20-32 nm in diameter, and three to six periplasmic 26-nm flagella were inserted subterminally. Comparably granulated and flagellated small spirochetes were located inside the protoplasmic cylinder and in the periplasm of the large ones. When exposed to air, movement became erratic, protoplasmic cylinders retracted to lie folded inside the outer membrane, and refractile membranous structures formed. From one to four structures per still-moving spirochete were seen. Spirosymplokos was enriched from laboratory samples exposed to oxygen-rich and desiccating, but not dry, conditions for at least 4 mo after removal of microbial mat from the field.

NASA Discipline Exobiology↗

NASA NTRS1993

The correlated blanching of synaptic bodies and reduction in afferent firing rates caused by transmitter-depleting agents in the frog semicircular canal

Synaptic bodies (SBs) associated with rings of synaptic vesicles and well-defined, pre- and post-synaptic membrane structures are indicators of maturity in most hair cell-afferent nerve junctions. The role of the SBs remains elusive despite several experiments showing that they may be involved in storage of neurotransmitter. Our results demonstrate that SBs of the adult posterior semicircular canal (SCC) cristae hair cells become less electron dense following incubation of the SCC with the transmitter-depleting drug tetrabenazine (TBZ). Objective quantification and comparison of the densities of the SBs in untreated and TBZ-treated frog SCC demonstrated that TBZ significantly decreased the electron density of SBs. This reduction in electron density was accompanied by a reduction in firing rates of afferent fibers innervating the posterior SCC. A second transmitter-depleting drug, guanethidine, previously shown to reduce the electron density of hair cell SBs, also reduced the firing rates of afferent fibers innervating the posterior SCC. In contrast, the electron density of dense granules (DG), similar in size and shape to synaptic bodies (SB) in hair cells, did not change after incubation in TBZ, thus indicating that granules and SBs are not similar in regard to their electron density. The role of SBs in synaptic transmission and the transmitter, if any, stored in the SBs remain unknown. Nonetheless, the association of the lessening of electron density with a reduction in afferent firing rate provides impetus for the further investigation of the SB's role in neurotransmission.

NASA Discipline Neuroscience↗

NASA NTRS1990

Growth hormone aggregates in the rat adenohypophysis

Although it has been known for some time that GH aggregates are contained within the rat anterior pituitary gland, the role that they might play in pituitary function is unknown. The present study examines this issue using the technique of Western blotting, which permitted visualization of 11 GH variants with apparent mol wt ranging from 14-88K. Electroelution of the higher mol wt variants from gels followed by their chemical reduction with beta-mercaptoethanol increased GH immunoassayability by about 5-fold. With the blot procedure we found 1) that GH aggregates greater than 44K were associated with a 40,000 x g sedimentable fraction; 2) that GH aggregates were not present in glands from thyroidectomized rats, but were in glands from the thyroidectomized rats injected with T4; 3) that GH aggregates were uniquely associated with a heavily granulated somatotroph subpopulation isolated by density gradient centrifugation; and 4) that high mol wt GH forms were released from the dense somatotrophs in culture, since treatment of the culture medium with beta-mercaptoethanol increased GH immunoassayability by about 5-fold. Taken together, the results show that high mol wt GH aggregates are contained in secretory granules of certain somatotrophs and are also released in aggregate form from these cells in vitro.

NASA Discipline Cell Biology↗

NASA NTRSDate not supplied

MISR Level 1A CCD Science data, all cameras (MIL1A_V1)

The Level 1A data are raw MISR data that are decommutated, reformatted 12-bit Level 0 data shifted to byte boundaries, i.e., reversal of square-root encoding applied and converted to 16 bit, and annotated (e.g., with time information). These data are used by the Level 1B1 processing algorithm to generate calibrated radiances. The science data output preserves the spatial sampling rate of the Level 0 raw MISR CCD science data. CCD data are collected during routine science observations of the sunlit portion of the Earth. Each product represents one 'granule' of data. A 'granule' is defined to be the smallest unit of data required for MISR processing. Also, included in the Level 1A product are pointers to calibration coefficient files provided for Level 1B processing. [Location=GLOBAL] [Temporal_Coverage: Start_Date=2000-02-24; Stop_Date=] [Spatial_Coverage: Southernmost_Latitude=-90; Northernmost_Latitude=90; Westernmost_Longitude=-180; Easternmost_Longitude=180].

CCD↗

NASA NTRSDate not supplied

MISR Level 1A CCD Science data, all cameras (MIL1A_V2)

AM-1↗