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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.
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We present the genome assemblies of two similar Paeniglutamicibacter strains, ORCA_105 and MACA_103, isolated from Mammoth and Oregon Cave systems, respectively. These closely related, but distinct genomes will provide a resource for those studying genomic adaptation to caves.
ABSTRACT Lysine acetylation is a post-translational modification that occurs in all domains of life, highlighting its evolutionary significance. Previous genome comparison identified three Gcn5-related N-acetyltransferase (GNAT) family members as lysine acetyltransferase homologs (Pat1, Pat2, and Elp3) and two deacetylase homologs (Sir2 and HdaI) in the halophilic archaeonHaloferax volcanii, withelp3andpat2proposed as a synthetic lethal gene pair. Here, we advance these findings by performing single and double mutagenesis ofelp3with thepat1andpat2lysine acetyltransferase gene homologs. Genome sequencing and PCR screens of these strains reveal successful generation of Δelp3,Δpat1Δelp3, and Δpat2Δelp3mutant strains. Although these mutant strains exhibited a reduced growth rate compared to the parent, they remained viable. Overall, this study provides genetic evidence thatelp3andpat2, while impacting cell growth, are not a synthetic lethal gene pair as previously reported. IMPORTANCE Here, we reveal by whole-genome sequencing that the GNAT family gene homologselp3andpat2can be deleted in the sameHaloferax volcaniistrain. Beyond the targeted deletions, minimal differences between the parent and Δelp3Δpat2mutant were observed, suggesting that suppressor mutations are not responsible for our ability to generate this double mutant strain. Elp3 and Pat2, thus, may not share as close a functional relationship as implied by earlier study. Our finding is significant as Elp3 is thought to function in acetylation in tRNA modification, while Pat2 likely functions in the lysine acetylation of proteins.
SAND2026-16703O SPAROW: Stochastic Programming and Related Optimization Workflows is a Python library tool that facilitates the development and solution of stochastic programming problems. It provides a user-friendly class structure for defining stochastic programs through scenario-based representations of uncertainties. SPAROW incorporates multiple optimization strategies, including integer programming with all scenarios, progressive hedging, Benders decomposition, and Snoglode, a novel technique developed by Carnegie Mellon University. It also features interfaces to external solvers and functions that are commonly used in analysis workflows, making it applicable to a wide range of scientific and engineering design challenges, particularly in power grid planning. Sandia National Laboratories is a multimission laboratory managed and operated by National Technology & Engineering Solutions of Sandia, LLC, a wholly owned subsidiary of Honeywell International Inc., for the U.S. Department of Energy’s National Nuclear Security Administration under contract DE-NA0003525.
The Demographic Microsimulator (DEMOS) is an agent-based simulation framework used to model the evolution of population demographic characteristics and lifecycle events, such as education attainment, marital status, and other key transitions. DEMOS modules are designed to capture the interdependencies between short-term and long-term lifecycle events, which are often influential in downstream transportation and land-use modeling. A key feature of DEMOS is its ability to track changes in an agent’s demographic status from year t to year t + 1. This structure allows the model to evolve populations over any user-defined time horizon. As a result, DEMOS is well suited for analyzing medium- and long-term transportation-related decisions, including household vehicle transactions (e.g., purchasing, selling, or replacing vehicles) and work location choices. Core features of DEMOS include the modeling of more than ten lifecycle events, behaviorally realistic patterns informed by long-running panel data, explicit representation of interdependencies among lifecycle processes, and a flexible, modular simulation architecture. A technical memorandum describing DEMOS is available here. The memorandum provides an overview of the framework’s functionality, model structure, input and output data, and its applications in transportation planning and broader policy analysis contexts. Interested readers are also encouraged to consult the paper listed below for additional details on the DEMOS methodology. Sun, Bingrong, Shivam Sharda, Venu M. Garikapati, Mohamed Amine Bouzaghrane, Juan Caicedo, Srinath Ravulaparthy, Isabel Viegas de Lima, Ling Jin, C. Anna Spurlock, and Paul Waddell. "Demographic Microsimulator for Integrated Urban Systems: Adapting Panel Survey of Income Dynamics to Capture the Continuum of Life." Transportation Research Record (2025): 03611981251333339.
Abstract The algorithms currently in use for calculating the wet-bulb temperature from pressure, relative humidity, and air temperature have errors of a degree or more. Here, the equation for the thermodynamic wet-bulb temperature is derived using the Rankine–Kirchhoff approximations, which are highly accurate for meteorological and climatological applications. Likewise, equations are derived for the thermodynamic ice-bulb temperature and for the psychrometric wet-bulb and ice-bulb temperatures. The equations are fast to solve, requiring only a microsecond on a current laptop computer, and the results match empirical data to within hundredths of a degree. Furthermore, the equations reveal the existence of air temperatures and humidities that generate bistability: Evaporating liquid water is stable at a liquid temperature above freezing and, simultaneously, sublimating ice is stable at an ice temperature below freezing.
Abstract A critical issue is determining the factors that control the year-to-year variability in precipitation over southern Asia. In this study, we employ a cyclostationary linear inverse model (CS-LIM) to quantify the relative contribution of tropical Pacific and Indian Ocean sea surface temperature anomalies (SSTAs) to the interannual variability of the Asian monsoon, especially Indian summer monsoon rainfall (ISMR). Through a series of CS-LIM experiments, we isolate the impacts of the direct forcing from Pacific SSTAs, Indian Ocean SSTAs, and their interaction on Asian monsoon rainfall variability. Our results reveal distinct patterns of influence with the direct forcing from the Pacific (Indian) Ocean tending to enhance (reduce) the magnitude of precipitation variability, while the Indo-Pacific interaction acts to strongly damp the variability of Asian monsoon precipitation, especially over India. We further investigate these specific impacts on ISMR by analyzing the relationship between tropical Indo-Pacific SSTAs and the leading three empirical orthogonal functions (EOFs) of ISMR. The results from our CS-LIM experiments indicate that the direct forcing from El Niño–Southern Oscillation (ENSO) enhances the variability of the first and third EOFs, while the Indian Ocean SSTA opposes ENSO’s effects, which is consistent with previous studies. Our new results show that the tropical Indo-Pacific interaction strongly damps ISMR variability, which is due to the ENSO-induced Indian Ocean dipole (IOD) opposing the direct impacts from ENSO on ISMR. Additionally, reduced ENSO amplitude and duration associated with the Indo-Pacific interaction may also contribute to the damping effect on ISMR, but this requires further study to understand the relevant mechanisms.
This archive contains both a link to Oak Ridge National Laboratory's Ground Source Heat Pump (GSHP) Screening Tool and related resources documenting its development, technical features, and applications. The web-based screening tool is a techno-economic analysis resource designed to evaluate the feasibility, costs, and benefits of implementing GSHP systems in buildings across various U.S. climate zones. It is intended for use by building owners, HVAC system designers, and installers to support decision-making in residential and commercial applications, incorporating advanced modeling capabilities such as ground heat exchanger design. The included resources detail the tool's creation and use, covering topics such as innovative ground heat exchanger design methodologies, the development of an open library of g-functions for borehole configurations, and studies on GSHP performance and economic viability in retrofitting single-family homes.
The presentation is to give an overview of the Nuclear Science User Facilities (NSUF) and its materials acquisition routes, sample library, and concrete related awards, at the NRC-NEA Hybrid Workshop on International Concrete Harvesting.
This report documents results for a scoping study evaluating the viability of using the higher energy, low yield U-235 gamma emission at 345.9 keV to link low energy U-235 emissions to high energy U-238 emissions (rather than U-232 decay products gamma emissions) for highly enriched uranium isotopic gamma spectroscopy relative efficiency assessments when no or little U-232 is present and the U-235 signal is strong.
The project spearheaded by Pennsylvania State University aims to address the growing need for integrating energy-focused computation and data science into building engineering education. As the demand for energy-efficient building designs and operations increases, the educational sector must adapt to equip future engineers with the necessary skills. This initiative responds to this need by developing a consortium that unites multiple institutions to enhance curriculum development, dataset curation, and resource sharing, thereby ensuring students are well-prepared for the evolving energy sector. The primary goal of the project is to establish a consortium that will develop and disseminate educational materials and training programs focused on energy-related data science and computation. Key accomplishments include the creation of a beta website for resource sharing, the development of training programs and standalone modules, and the curation of datasets accessible to the public. This effort will culminate in a curriculum that incorporates advanced modeling technologies and data science skills into building engineering programs.
Graphynes, two-dimensional carbon lattices combining sp 1 and sp 2 hybridized atoms, were predicted theoretically more than three decades ago, but few structures have been realized to date. These carbons are believed to possess remarkable mechanical and electronic properties, including high charge carrier mobilities comparable to those in graphene (10 4 to 10 5 cm 2 V -1 s -1 ). Unlike graphene, certain graphynes are predicted to be intrinsic semiconductors. Among these intriguing structures, γ-graphyne stands out as the structurally simplest and most symmetric sp 1 /sp 2 lattice. γ-Graphyne was first theorized in 1987. In contrast with graphene, γ-graphyne will be a semiconductor with a small band gap suitable for fabrication of electronic devices. This solves one of the fundamental problems of carbon-based electronics, the necessity for inducing a band gap in graphene. γ-Graphyne has the potential to form the basis for the next generation of carbon-based electronics operating at speeds unattainable by traditional silicon chips. Unlike silicon, γ-graphyne is a direct band gap semiconductor, and it will feature exceptional strength comparable to that of other 2D carbon allotropes. Such combination of properties may enable a new generation of highly efficient, ultra-light and flexible solar cells. Despite being a potentially “magical” material, γ-graphyne remained synthetically elusive for over three decades. The primary goals of this project were: (1) Synthesis of bulk γ-graphyne phases through solution-phase 2D polymerizations; (2) Experimental exploration of the physical and chemical properties of γ-graphyne; and (3) Mechanistic and theoretical studies of the novel chemical transformations developed in Goal 1. Common pyrolytic and vapor-deposition methodologies used for the synthesis of graphitic allotropes are unsuitable for graphyne and other sp 1 -contaning structures, as acetylenes readily convert to graphene and amorphous carbon at high temperatures. In contrast, this proposal is based on solution-based 2D polymerization. The major advantages of this approach over the traditional high temperature techniques are the potential to adjust the structure of the material with atomic precision, and the possibility of using structurally complex and relatively fragile repeat units. The outcomes of this research can revolutionize carbon nanotechnology, expanding the field’s structural toolbox beyond primarily graphitic and benzenoid structures. Understanding the chemistry of sp 1 carbon allotropes can lead to entirely new classes of structures with unique properties, including graphyne ribbons, nanotubes, quantum dots, and heterostructures with other 2D materials. Furthermore, the development of reliable and robust synthetic pathways towards periodic covalent molecular sheets with atomically precise structures shall have a profound impact on chemistry and materials science.
The phononic dispersion relations calculated by solving an eigenvalue problem while applying Bloch-Floquet boundary conditions are applied to three varieties of phononic pseudocrystals interposers useful for suppressing the transmission of structure-born vibration.
This is a software-specific quality assurance plan (SQAP) for the X-Ray ToolKit (XTK) software that aligns with Sandia policy IT008, the SSQAP policy SS-R89727, and requirements related to DOE O 414.1D, Quality Assurance for software development.
The overall goals of this project were to advance understanding of reactions and scattering states in light nuclei, as well as related properties of bound states, and to facilitate application of that understanding to astrophysics and cosmology. These goals were pursued mainly using quantum Monte Carlo methods to compute nuclear properties using protons and neutrons as the basic degrees of freedom.
This research enhances SAR image classifiers of military fighting vehicles by enabling out-of-distribution (OOD) recognition using Relative Mahalanobis Distance (RMD)
For E. coli, C. thermocellum, Z. mobilis: shotgun proteomics analyses of tryptic digests of cell lysates; direct infusion of cell lysates spiked with isotopically labelled peptides to perform absolute quantification of specific proteins of interest, primarily related to glycolysis
Topic modeling is a crucial technique in natural language processing (NLP), enabling the extraction of latent themes from large text corpora. Traditional topic modeling, such as Latent Dirichlet Allocation (LDA), faces limitations in capturing the semantic relationships in the text document although it has been widely applied in text mining. BERTopic, created in 2022, leveraged advances in deep learning and can capture the contextual relationships between words. In this work, we integrated Artificial Intelligence (AI) modules to LDA and BERTopic and provided a comprehensive comparison on the analysis of prescription opioid-related cardiovascular risks in women. Opioid use can increase the risk of cardiovascular problems in women such as arrhythmia, hypotension etc. 1,837 abstracts were retrieved and downloaded from PubMed as of April 2024 using three Medical Subject Headings (MeSH) words: “opioid,” “cardiovascular,” and “women.” Machine Learning of Language Toolkit (MALLET) was employed for the implementation of LDA. BioBERT was used for document embedding in BERTopic. Eighteen was selected as the optimal topic number for MALLET and 23 for BERTopic. ChatGPT-4-Turbo was integrated to interpret and compare the results. The short descriptions created by ChatGPT for each topic from LDA and BERTopic were highly correlated, and the performance accuracies of LDA and BERTopic were similar as determined by expert manual reviews of the abstracts grouped by their predominant topics. The results of the t-SNE (t-distributed Stochastic Neighbor Embedding) plots showed that the clusters created from BERTopic were more compact and well-separated, representing improved coherence and distinctiveness between the topics. Our findings indicated that AI algorithms could augment both traditional and contemporary topic modeling techniques. In addition, BERTopic has the connection port for ChatGPT-4-Turbo or other large language models in its algorithm for automatic interpretation, while with LDA interpretation must be manually, and needs special procedures for data pre-processing and stop words exclusion. Therefore, while LDA remains valuable for large-scale text analysis with resource constraints, AI-assisted BERTopic offers significant advantages in providing the enhanced interpretability and the improved semantic coherence for extracting valuable insights from textual data.
Abstract One of the main goals of gravitational-wave astrophysics is to study gravity in the strong-field regime and constrain deviations from general relativity (GR). Any such deviation affects not only binary dynamics and gravitational-wave emission but also the structure and tidal properties of compact objects. In the case of neutron stars, masses, radii, and tidal deformabilities can all differ significantly between different theories of gravity. Currently, the measurement uncertainties in neutron star radii and tidal deformabilities are quite large. However, much less is known about how the large uncertainty in the nuclear equation of state (EOS) might affect tests of GR using binary neutron star mergers. Conversely, using the wrong theory of gravity might lead to incorrect constraints on the nuclear EOS. Here, we study this problem within scalar–tensor (ST) theory. We apply the recently derived ℓ = 2 tidal Love numbers in this theory to parameter estimation of GW170817. Correspondingly, we test if physics beyond GR could bias measurements of the nuclear EOS and neutron star radii. We find that parameter inference for both the GR and ST cases returns consistent component masses and tidal deformabilities. The radius and the EOS posteriors, however, differ between the two theories, but neither is excluded by current observational limits. This indicates that measurements of the nuclear EOS may be biased and that deviations from GR could go undetected when analyzing current binary neutron star mergers.