Current Hardware Capabilities Relevant to Near-Term Plant and Plant-Microbiome Studies in Space
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LISA Pathfinder
USA Pathfinder is a space mission dedicated to demonstrating technology for the Laser Interferometer Space Antenna (LISA). LISA is a joint ESA/NASA mission to detect low-frequency gravitational waves on the 0.0001 to 0.1 Hz frequency band. LISA is expected to observe 100's of merging massive black hole binaries out z-15, tens of thousands of close compact binary systems in the Milky Way, merging intermediate-mass black hole binaries, tens of stellar-mass black holes falling into supermassive black holes in galactic centers, and possibly other exotic sources. Several critical LISA technologies have not been demonstrated at the requisite level of performance. In spaceflight, and some fight hardware cannot be tested in a 1-g environment. Hence, the LISA Pathfinder mission is being implemented to demonstrate these critical LISA technologies in a relevant flight environment. LISA Pathfinder mimics one arm of the LISA constellation by shrinking the 5-million-kilometer armlength down to a few tens of centimeters. The experimental concept is to measure the relative separation between two test masses nominally following their own geodesics, and thereby determine the relative residual acceleration between them near 1 mHz, about a decade above the lowest frequency required by LISA. To implement such a concept, disturbances on the test masses must be kept very small by many design features, but chiefly by "drag-free" flight. A drag-free spacecraft follows a free-falling test mass which it encloses, but has no mechanical connection to. The spacecraft senses it's orientation and separation with respect to the proof mass, and its propulsion system is commanded to keep the spacecraft centered about the test mass. Thus, the spacecraft shields the test mass from most external influences, and minimizes the effect of force gradients arising from the spacecraft, and acting on the test mass. LISA Pathfinder will compare the geodesic of one test mass against that of the other. Only a metrology system based on interferometry can achieve the displacement sensitivity. Interferometers monitor the separation of both test masses with a sensitivity comparable to that required by LISA, and using the same technologies. LISA Pathfinder is scheduled to be launched in the first half of 1020 to a Lissajous orbit around the first Sun-Earth Lagrange point, L1. In addition to a complete European technology package (the LISA Technology Package, or LTP), LISA Pathfinder will also carry thrusters and software, known as ST-7, a part of NASA's New Millennium Program.
Stebbins, Robin↗
Design and Demonstration of the Mars Organic Molecule Analyzer (MOMA) on the ExoMars 2018 Rover
The Mars Organic Molecule Analyzer (MOMA) investigation is a key astrobiology experiment scheduled to launch on the joint ESA-Roscosmos ExoMars 2018 rover mission. MOMA will examine the chemical composition of geological samples acquired from depths of up to two meters below the martian surface, where fragile organic molecules may be protected from destructive cosmic radiation and/or oxidative chemical reactions. The heart of the MOMA mass spectrometer subsystem (i.e., MOMA-MS) is a miniaturized linear ion trap (LIT) that supports two distinct modes of operation to detect: i) volatile and semi-volatile, low-to-moderate mass organics (less than or equal to 500 Da) via pyrolysis coupled with gas chromatography mass spectrometry (pyr/GCMS); and, ii) more refractory, moderate-to-high mass compounds (up to 1000 Da) via laser desorption (LDMS) at ambient Mars pressures. Additionally, the LIT mass analyzer enables selective ion trapping via multi-frequency waveform ion excitation (e.g., stored waveform inverse Fourier transform, or SWIFT), and structural characterization of complex molecules using tandem mass spectrometry (MSIMS). A high-fidelity Engineering Test Unit (ETU) of MOMAMS, including the LIT subassembly, dual-gun electron ionization source, micropirani pressure gauge, solenoid-driven aperture valve, redundant detection chains, and control electronics, has been built and tested at NASA GSFC under relevant operational conditions (pressure, temperature, etc.). Spaceflight qualifications of individual hardware components and integrated subassemblies have been validated through vibration, shock, thermal, lifetime, and performance evaluations. The ETU serves as a pathfinder for the flight model buildup, integration and test, as the ETU meets the form, fit and function of the flight unit that will be delivered to MPS in late 2015. To date, the ETU of MOMA-MS has been shown to meet or exceed all functional requirements, including mass range, resolution, accuracy, instrumental drift, and Iimit-of-detection specifications, thereby enabling the primary science objectives of the MOMA investigation and ExoMars 2018 mission.
Mars Organic Molecule Analyzer↗
Spaceflight Environmental-Telemetry Data for Biological Science
There is a critical need for better access and visualization of spaceflight environmental telemetry and mission hardware data from sensors including relative humidity, carbon dioxide, oxygen, radiation, airflow, temperature, acceleration, and acoustics. Under the stewardship of the Ames Life Sciences Data Archive (ALSDA) and GeneLab, an effort is underway to consolidate, normalize and provide accessibility of archived mission environmental data and hardware information, with the purpose of providing important context to biological data. This effort is necessary to provide scientific context of its impact upon biological and biomedical data from spaceflight missions and experiments (genomic, metagenomic, gene expression, proteomic, metabolomic, physiological, phenomics, behavioral; tabular, imaging, video). Environmental spaceflight data is derived from dozens of sources, with various formats, and in the past year a pipeline is in development to collect, curate and present this data efficiently. In the upcoming year, a new Data Visualization Portal will utilize the standardized pipeline data to provide easy user access to compare parameters and environmental conditions between missions, locations, subjects, and durations. Environmental and hardware data enables broad accessibility and analytics, without the need for advanced data informatic expertise. Familiarity with the capabilities and limitations of a variety of existing hardware/tools is a strength that could be applied to creation of improved hardware for future ecosystems on the Moon and Mars. The intention is to make biological and environmental telemetry data maximally open-access and FAIR (findable, accessible, interoperable, reusable) for data mining-informatic approaches to support knowledge discovery necessary for low Earth orbit, cis-Lunar, Mars transit, and Mars surface missions.
Danielle K. Lopez↗
Designing for Reliability and Robustness
Long duration spaceflight has a negative effect on the human body, and exercise countermeasures are used on-board the International Space Station (ISS) to minimize bone and muscle loss, combatting these effects. Given the importance of these hardware systems to the health of the crew, this equipment must continue to be readily available. Designing spaceflight exercise hardware to meet high reliability and availability standards has proven to be challenging throughout the time the crewmembers have been living on ISS beginning in 2000. Furthermore, restoring operational capability after a failure is clearly time-critical, but can be problematic given the challenges of troubleshooting the problem from 220 miles away. Several best-practices have been leveraged in seeking to maximize availability of these exercise systems, including designing for robustness, implementing diagnostic instrumentation, relying on user feedback, and providing ample maintenance and sparing. These factors have enhanced the reliability of hardware systems, and therefore have contributed to keeping the crewmembers healthy upon return to Earth. This paper will review the failure history for three spaceflight exercise countermeasure systems identifying lessons learned that can help improve future systems. Specifically, the Treadmill with Vibration Isolation and Stabilization System (TVIS), Cycle Ergometer with Vibration Isolation and Stabilization System (CEVIS), and the Advanced Resistive Exercise Device (ARED) will be reviewed, analyzed, and conclusions identified so as to provide guidance for improving future exercise hardware designs. These lessons learned, paired with thorough testing, offer a path towards reduced system down-time.
Svetlik, Randall G.↗
NASA GSFC Avionics Architectures and Future Directions
NASA Goddard Spaceflight Center (GSFC) employs standard avionics hardware and software architectures. Hardware architectures include GMSA (Goddard Modular Smallsat Architecture), MUSTANG (Modular Unified Space Technology Avionics for Next Generation), SpaceCube. The spaceflight software architecture is based on cFS (Core Flight System). Future driving requirements for avionics architectures include increase sensor data rates, increased onboard processing, autonomous applications, and distributed space missions. Architectural concepts that can meet these requirements include the use of the High Performance Spaceflight Computing (HPSC) Chiplet, employing hybrid computing architectures, and increasing network bandwidths.
architectures↗
Designing Payload and Spaceflight Operations for Plants From Extreme 1 Terrestrial Environments
Terrestrial plants from the edges of the limits of life are likely to harbor genes that confer an advantage in deep space environments. These plants are seemingly capable of performing mission critical functions under prevailing deep space conditions while informing directed gene manipulation in target plant species. However, their adaptations to physiologically extreme habitats may hinder efficacy of routine laboratory techniques established for model plants. Here we present the development of Antarctic moss Ceratodon purpureus payload and flight operations for the ARTEMOSS experiment to the ISS astute of limited physical space and crew time. We demonstrate that the hydrophobic surface of Antarctic moss impedes chemical tissue fixation and precludes usage of RNAlater coupled with payload hardware deployed in standard plant spaceflight experiments. We show that deep-freezing the moss tissue on Petri plates provides adequate tissue fixation and allows for extraction of high-quality RNA suitable for gene expression profiling. We replaced hardware with stacks of Petri plates housing Antarctic moss and chemical fixation with deep-freeze in cryogenic GLACIER freezer. Our design can be translated to other plant species, expanding current techniques of experimentation with plants from extreme terrestrial environments aimed toward advancing human space exploration.
Agata K Zupanska↗
Biological Insights at the Interface of Multiple Arabidopsis Legacy Datasets
The NASA GeneLab database includes an open-access collection of datasets yielded by space biology experiments. Six Gene Lab Data Sets (GLDS’s) performed in Arabidopsis were selected for analysis (7/17/44/121/205/213), all of which included transcriptome data from spaceflight and ground control environments. Hardware, ecotype, environmental conditions, and other experimental conditions varied, allowing the observations of overarching gene expression impacts of microgravity on plant life without focusing on effects of specific experimental conditions. Using GeneLab pre-processed datasets as the basis for the study, RNA microarray data were analyzed to identify genes that showed altered expression in microgravity when compared to control samples for each individual GLDS. All differentially expressed genes were compared to locate differentially expressed genes common between spaceflight experiments. The most noteworthy result is that not one gene shared differential expression among the six GLDS’s. However, gene expression was not influenced randomly by the microgravity environment, as there were several gene ontology terms that were significantly enriched across all experiments. These included 20 significantly enriched biological processes, and although the genes which enriched each term varied, there were many cases of specific genes common to clusters of multiple GLDS’s. Gene expression such as NAC92 and ERF011 or membrane structural element FFP6 provide insight and direction toward understanding the plant response to spaceflight. Characterizing these common processes and the shared differentially expressed genes has demonstrated potential targets for further study to understand and modulate the biological response of plants in microgravity. Life on Earth has never been subjected to the absence of gravity as a selective pressure, so observing how life forms react to a microgravity environment could provide insight to our shared fundamental biological processes. It is also feasible that the genetic modification of specific genes linked to the microgravity response could improve health and yield of space crops.
Joseph Emhof↗
Planning for Crew Exercise for Future Deep Space Mission Scenarios
Providing the necessary exercise capability to protect crew health for deep space missions will bring new sets of engineering and research challenges. Exercise has been found to be a necessary mitigation for maintaining crew health on‐orbit and preparing the crew for return to earth's gravity. Health and exercise data from Apollo, Space Lab, Shuttle, and International Space Station missions have provided insight into crew deconditioning and the types of activities that can minimize the impacts of microgravity on the physiological systems. The hardware systems required to implement exercise can be challenging to incorporate into spaceflight vehicles. Exercise system design requires encompassing the hardware required to provide mission specific anthropometrical movement ranges, desired loads, and frequencies of desired movements as well as the supporting control and monitoring systems, crew and vehicle interfaces, and vibration isolation and stabilization subsystems. The number of crew and operational constraints also contribute to defining the what exercise systems will be needed. All of these features require flight vehicle mass and volume integrated with multiple vehicle systems. The International Space Station exercise hardware requires over 1,800 kg of equipment and over 24 m3 of volume for hardware and crew operational space. Improvements towards providing equivalent or better capabilities with a smaller vehicle impact will facilitate future deep space missions. Deep space missions will require more understanding of the physiological responses to microgravity, understanding appropriate mitigations, designing the exercise systems to provide needed mitigations, and integrating effectively into vehicle design with a focus to support planned mission scenarios. Recognizing and addressing the constraints and challenges can facilitate improved vehicle design and exercise system incorporation.
Moore, Cherice↗
Batch Effect Correction Methods for NASA GeneLab Transcriptomic Datasets
RNA sequencing (RNA-seq) data from space biology experiments promise to yield invaluable insights into the effects of spaceflight on terrestrial biology. However, sample numbers from each study are low due to limited crew availability, hardware, and space. To increase statistical power, spaceflight RNA-seq datasets from different missions are often aggregated together. However, this can introduce technical variation or "batch effects", often due to differences in sample handling, sample processing, and sequencing platforms. Several computational methods have been developed to correct for technical batch effects, thereby reducing their impact on true biological signals. In this study, we combined 7 mouse liver RNA-seq datasets from NASA GeneLab (part of the NASA Open Science Data Repository) to evaluate several common batch effect correction methods (ComBat and ComBat-seq from the sva R package, and Median Polish, Empirical Bayes, and ANOVA from the MBatch R package). We quantitatively evaluated the ability of these methods to correct for technical batch variables in space biology RNA-seq data using the following criteria: BatchQC, principal component analysis, dispersion separability criterion, log fold change correlation, and differential gene expression analysis. Each batch variable / correction method combination was then assessed using a custom scoring approach to identify the optimal correction method for the combined dataset, by geometrically probing the space of all allowable scoring functions to yield an aggregate volume-based scoring measure. Finally, we describe the way in which the GeneLab multi-study analysis and visualization portal will allow users to examine the presence or absence of batch effects using multiple metrics. If the user chooses to perform batch effect correction, the scoring approach described here can be implemented to identify the optimal correction method to use for their specific combined dataset prior to analysis.
Lauren M. Sanders↗
On Certain New Methodology for Reducing Sensor and Readout Electronics Circuitry Noise in Digital Domain
NASA Hubble Space Telescope (HST) and upcoming cosmology science missions carry instruments with multiple focal planes populated with many large sensor detector arrays. These sensors are passively cooled to low temperatures for low-level light (L3) and near-infrared (NIR) signal detection, and the sensor readout electronics circuitry must perform at extremely low noise levels to enable new required science measurements. Because we are at the technological edge of enhanced performance for sensors and readout electronics circuitry, as determined by thermal noise level at given temperature in analog domain, we must find new ways of further compensating for the noise in the signal digital domain. To facilitate this new approach, state-of-the-art sensors are augmented at their array hardware boundaries by non-illuminated reference pixels, which can be used to reduce noise attributed to sensors. There are a few proposed methodologies of processing in the digital domain the information carried by reference pixels, as employed by the Hubble Space Telescope and the James Webb Space Telescope Projects. These methods involve using spatial and temporal statistical parameters derived from boundary reference pixel information to enhance the active (non-reference) pixel signals. To make a step beyond this heritage methodology, we apply the NASA-developed technology known as the Hilbert- Huang Transform Data Processing System (HHT-DPS) for reference pixel information processing and its utilization in reconfigurable hardware on-board a spaceflight instrument or post-processing on the ground. The methodology examines signal processing for a 2-D domain, in which high-variance components of the thermal noise are carried by both active and reference pixels, similar to that in processing of low-voltage differential signals and subtraction of a single analog reference pixel from all active pixels on the sensor. Heritage methods using the aforementioned statistical parameters in the digital domain (such as statistical averaging of the reference pixels themselves) zeroes out the high-variance components, and the counterpart components in the active pixels remain uncorrected. This paper describes how the new methodology was demonstrated through analysis of fast-varying noise components using the Hilbert-Huang Transform Data Processing System tool (HHT-DPS) developed at NASA and the high-level programming language MATLAB (Trademark of MathWorks Inc.), as well as alternative methods for correcting for the high-variance noise component, using an HgCdTe sensor data. The NASA Hubble Space Telescope data post-processing, as well as future deep-space cosmology projects on-board instrument data processing from all the sensor channels, would benefit from this effort.
Kizhner, Semion↗
4D Light Field Imaging System Using Programmable Aperture
Complete depth information can be extracted from analyzing all angles of light rays emanated from a source. However, this angular information is lost in a typical 2D imaging system. In order to record this information, a standard stereo imaging system uses two cameras to obtain information from two view angles. Sometimes, more cameras are used to obtain information from more angles. However, a 4D light field imaging technique can achieve this multiple-camera effect through a single-lens camera. Two methods are available for this: one using a microlens array, and the other using a moving aperture. The moving-aperture method can obtain more complete stereo information. The existing literature suggests a modified liquid crystal panel [LC (liquid crystal) panel, similar to ones commonly used in the display industry] to achieve a moving aperture. However, LC panels cannot withstand harsh environments and are not qualified for spaceflight. In this regard, different hardware is proposed for the moving aperture. A digital micromirror device (DMD) will replace the liquid crystal. This will be qualified for harsh environments for the 4D light field imaging. This will enable an imager to record near-complete stereo information. The approach to building a proof-ofconcept is using existing, or slightly modified, off-the-shelf components. An SLR (single-lens reflex) lens system, which typically has a large aperture for fast imaging, will be modified. The lens system will be arranged so that DMD can be integrated. The shape of aperture will be programmed for single-viewpoint imaging, multiple-viewpoint imaging, and coded aperture imaging. The novelty lies in using a DMD instead of a LC panel to move the apertures for 4D light field imaging. The DMD uses reflecting mirrors, so any light transmission lost (which would be expected from the LC panel) will be minimal. Also, the MEMS-based DMD can withstand higher temperature and pressure fluctuation than a LC panel can. Robotics need near complete stereo images for their autonomous navigation, manipulation, and depth approximation. The imaging system can provide visual feedback
Bae, Youngsam↗
ESTA Exit Report
The Energy Test System's Area (ESTA) provides test capabilities and facilities to develop, evaluate or certify hardware in support of human spaceflight. The branch has a few different technical areas including pyrotechnics, batteries, electrical systems, power systems, propulsion and fluids. I will be mainly worked in the propulsion and fluids area. The tests/activities include testing the fluid and energy conversion systems that are required for the exploration and development of space. This group includes function and vibration tests, as well as thermal and vacuum tests. I was trained and certified as an ESTA test director in order to work on tests and sub tests with my mentor as well as the rest of the ESTA team. As a test director, I had the responsibility and authority for planning, developing, safety, execution and reporting on assigned test programs.
Lundebjerg, Kristen↗
Microgreens Food Safety Evaluation
Microgreens have been recently identified as a new type of pick and eat salad crop that can be utilized in space crop production systems. The majority of traditionally grown leafy green crops can be grown as microgreens, in addition to crops such as legumes (e.g. pea shoots), sunflower, buckwheat, most herbs, and corn, presenting hundreds of microgreen crop options. With a wide variety of flavors, exceptional nutritional density, short growth cycles (7-14 days), and unmatched volume optimization potential, microgreens present as an interesting option for sustainable production of nutritious and flavorful crops in space. The food safety aspects of microgreens have been investigated by USDA in recent years, however, an assessment for crew consumption purposes has not yet been conducted to capture the variety of microgreen cultivar types grown in spaceflight relevant environmental conditions and hardware that could be a part of the astronaut diet. Seed sanitation methods will be developed for each microgreen cultivar to sanitize the seed coat and ensure viable germination and plant growth. Food safety analysis will be performed on 24 different fast-growing cultivars of microgreens by performing aerobic plate counts (APC), fungal counts, and select pathogen screening of edible plant tissue before and after treatment with ProSan sanitizing produce wash. Additional avenues of investigation into microgreens food safety will be undertaken to understand impacts of plant height at time of harvest (able to be manipulated by light spectrum), seed density at time of planting, and role of blue light in food safety metrics of microgreens (n=6-12 microgreen cultivars tested, depending on variable). These findings will be included in the Space Crop Production Hazard Analysis Critical Control Point (HACCP) plan. This new work is currently postponed due to Covid-19.
M E Hummerick↗
Ames Research Center Life Sciences Payload - Overview of results of a spaceflight of 24 rats and 2 monkeys
A hardware description and experimental results are reported from the initial STS flight carrying two Research Animal Holding Facility (RAHF) units. The flight was mainly intended for engineering check-out of the RAHF design. The system development and prelaunch preparations are briefly summarized, including the provisions of retrieval teams at alternate landing sites and extensive rehearsals to ensure timely data analysis. The flight revealed a problem with the containment of particulates from the RAHFs and the provision of adequate water for the monkeys. On-board films showed that one of the monkeys experienced motion sickness, from which he recovered after 5 days in space. Necropsy of the subject rats documented suppressed interferon production, loss of muscle mass, an up to 13 percent loss in bone mass (after a one week flight), and a 20 percent decrease in growth-inducing hormone. The volume of data collected is thought to exceed the combined data gathered on all previous U.S. space missions.
Callahan, P. X.↗
Status of joint US/USSR experiments planned for the Cosmos '83 biosatellite mission
The plans and status of the fourth joint US/USSR biosatellite experiment, scheduled to be conducted in the last half of 1983, are discussed. These experiments will be conducted on board an unmanned Soviet spacecraft and will involve two restrained Rhesus monkeys and 10 pregnant rats, as well as a variety of small plant and radiation biology experiments. Three of the joint studies will use the monkeys for studies of biorhythms, calcium homeostasis, and the cardiovascular system. The fourth experiment will study rodent embryogenesis and neonatal behavior and development following in utero exposure to spaceflight. Specialized sensors and battery powered hardware have been designed, fabricated, and qualified for flight.
Souza, K. A.↗
Evaluating Risk Of Failure With Limited Information
Report describes probabilistic failure assessment (PFA). Developed for application to spaceflight systems for sufficient testing of hardware to ensure reliability not feasible. However, must be ascertained that critical failure modes extremely unlikely to occur during service. PFA applied to any failure mode described by quantitative models of physics and mechanics of failure phenomena, such as fatigue crack in initiation or propagation in structures, leakage of seals, wear in bearings, and erosion of arcjet thrustor cathodes.
Moore, N. R.↗
Crew Systems Laboratory/Building 7. Historical Documentation
Building 7 is managed by the Crew and Thermal Systems Division of the JSC Engineering Directorate. Originally named the Life Systems Laboratory, it contained five major test facilities: two advanced environmental control laboratories and three human-rated vacuum chambers (8 , 11 , and the 20 ). These facilities supported flight crew familiarization and the testing and evaluation of hardware used in the early manned spaceflight programs, including Gemini, Apollo, and the ASTP.
Slovinac, Patricia↗