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At least 1,513 records · Page 84

Digital atomic scale fabrication an inverse Moore's Law – A path to atomically precise manufacturing

There is an exciting opportunity to start a second digital revolution that will supersede the first digital revolution in information technology (IT) as the primary driver of scientific, technological, and economic growth. This new revolution will be digital fabrication technology. Here, the digital IT revolution has been largely driven by digital algorithms such as error detection and correction and Moore's Law which has given us an exponential trend in product capabilities. However, the longstanding trend in improving manufacturing precision which has enabled Moore's Law simply cannot be continued much longer because we are running into the limits imposed by the quantized nature of matter. At this scale, matter can no longer be treated in an analogue fashion i.e. as an infinitely divisible medium, but must be treated as an integer number of discrete atomic distances, i.e. in a digital fashion. By embracing this digital nature of matter, we can conceive of a digital fabrication technology, where the digital processes are the making and breaking of chemical bonds, there is a digital address grid that is spatial in nature, and error detection and correction processes can be developed. This digital fabrication technology will have the similarly huge advantages over analog fabrication that digital IT has over analog IT. We remind the reader that effective digital technologies are not exclusively digital in their operation. Digital electronics is carried out by analog transistors that are embedded in circuitry designed to accept their output in a digital fashion. Digital fabrication technology is not synonymous with Atomically Precise Manufacturing (APM) but should lead to that important capability. Furthermore this digital fabrication technology will start a new exponential manufacturing trend that will replace Moore's law and will not be just for information processing and therefore will have an even larger impact than Moore's Law. Like any exponential trend Digital Fabrication will start slowly in a few niche markets, but the time for investing in the development of this new technology is now.

77 NANOSCIENCE AND NANOTECHNOLOGY↗

Predicting ptychography probe positions using single-shot phase retrieval neural network

Ptychography is a powerful imaging technique that is used in a variety of fields, including materials science, biology, and nanotechnology. However, the accuracy of the reconstructed ptychography image is highly dependent on the accuracy of the recorded probe positions which often contain errors. These errors are typically corrected jointly with phase retrieval through numerical optimization approaches. When the error accumulates along the scan path or when the error magnitude is large, these approaches may not converge with satisfactory result. We propose a fundamentally new approach for ptychography probe position prediction for data with large position errors, where a neural network is used to make single-shot phase retrieval on individual diffraction patterns, yielding the object image at each scan point. The pairwise offsets among these images are then found using a robust image registration method, and the results are combined to yield the complete scan path by constructing and solving a linear equation. We show that our method can achieve good position prediction accuracy for data with large and accumulating errors on the order of 10 2 pixels, a magnitude that often makes optimization-based algorithms fail to converge. For ptychography instruments without sophisticated position control equipment such as interferometers, our method is of significant practical potential.

47 OTHER INSTRUMENTATION↗

GEDet: Detecting Erroneous Nodes with A Few Examples

Detecting nodes with erroneous values in real-world graphs re- mains challenging due to the lack of examples and various error scenarios. We demonstrate GEDet, an error detection engine that can detect erroneous nodes in graphs with a few examples. The GEDet framework tackles error detection as a few-shot node classification problem. We invite the attendees to experience the following unique features. (1) Few-shot detection. Users only need to provide a few examples of erroneous nodes to perform error detection with GEDet. GEDet achieves desirable accuracy with (a) a graph augmentation module, which automatically generates synthetic examples to learn the classifier, and (b) an adversarial detection module, which improves classifiers to better distinguish erroneous nodes from both cleaned nodes and synthetic examples. We show that GEDet significantly improves the state-of-the-art error detection methods. (2) Diverse error scenarios. GEDet profiles data errors with a built-in library of transformation functions from correct values to errors. Users can also easily “plug in” new error types or examples. (3) User-centric detection. GEDet supports (a) an active learning mode to engage users to verify detected results, and adapts the error detection process accordingly; and (b) visual interfaces to interpret and track detected errors.

Guan, Sheng↗

An all digital phase locked loop for synchronization of a sinusoidal signal embedded in white Gaussian noise

An all digital phase locked loop which tracks the phase of the incoming sinusoidal signal once per carrier cycle is proposed. The different elements and their functions and the phase lock operation are explained in detail. The nonlinear difference equations which govern the operation of the digital loop when the incoming signal is embedded in white Gaussian noise are derived, and a suitable model is specified. The performance of the digital loop is considered for the synchronization of a sinusoidal signal. For this, the noise term is suitably modelled which allows specification of the output probabilities for the two level quantizer in the loop at any given phase error. The loop filter considered increases the probability of proper phase correction. The phase error states in modulo two-pi forms a finite state Markov chain which enables the calculation of steady state probabilities, RMS phase error, transient response and mean time for cycle skipping.

Reddy, C. P.↗

Publisher Correction: Engineering bacterial vortex lattice via direct laser lithography

The original version of this Article contained errors in Fig. 2. In Fig. 2d, the label below the blue circle incorrectly read “S i,a (t) < 0” and should have read “S i,a (t) > 0”. Furthermore, the sequence of labels on the side of the bottom three panel in Fig. 2 from top to bottom incorrectly read “S 9,70 > 0, S 9,70 > 0, S 9,70 < 0”, and should have read “S 9,70 < 0, S 9,70 > 0, S 9,70 < 0”. Finally, in the legend to Fig. 2, the scale bar size description “Scale bar: 100 μm” was incorrectly placed in the description of panel c, and should have been placed in the description of panel d. These errors have been corrected in both the PDF and HTML versions of the Article.

59 BASIC BIOLOGICAL SCIENCES↗

On the performance of large Gaussian basis sets for the computation of total atomization energies

The total atomization energies of a number of molecules have been computed using an augmented coupled-cluster method and (5s4p3d2f1g) and 4s3p2d1f) atomic natural orbital (ANO) basis sets, as well as the correlation consistent valence triple zeta plus polarization (cc-pVTZ) correlation consistent valence quadrupole zeta plus polarization (cc-pVQZ) basis sets. The performance of ANO and correlation consistent basis sets is comparable throughout, although the latter can result in significant CPU time savings. Whereas the inclusion of g functions has significant effects on the computed Sigma D(e) values, chemical accuracy is still not reached for molecules involving multiple bonds. A Gaussian-1 (G) type correction lowers the error, but not much beyond the accuracy of the G1 model itself. Using separate corrections for sigma bonds, pi bonds, and valence pairs brings down the mean absolute error to less than 1 kcal/mol for the spdf basis sets, and about 0.5 kcal/mol for the spdfg basis sets. Some conclusions on the success of the Gaussian-1 and Gaussian-2 models are drawn.

Martin, J. M. L.↗

Stitching interferometry for ellipsoidal x-ray mirrors

Ellipsoidal mirrors, which can efficiently produce a two-dimensional focusing beam with a single mirror, are superior x-ray focusing optics, especially when compared to elliptical-cylinder mirrors in the Kirkpatrick–Baez geometry. However, nano-focusing ellipsoidal mirrors are not commonly used for x-ray optics because achieving the accuracy required for the surface metrology of nano-focusing ellipsoidal mirrors is difficult due to their small radius of curvature along the short ellipsoidal axis. Here, we developed a surface metrology system for nano-focusing ellipsoidal mirrors using stitching interferometric techniques. The developed system simultaneously measures sub-aperture shapes with a microscopic interferometer and the tilt angles of the sub-aperture shapes with a large Fizeau interferometer. After correcting the systematic errors included in the sub-aperture shapes, the entire mirror shape is calculated by stitching the sub-aperture shapes based on the obtained relative angles between partially overlapped sub-apertures. In this study, we developed correction methods for systematic errors in sub-aperture shapes that originated from off-axis aberrations produced in the optics of the microscopic interferometer. The systematic errors on an ellipsoidal mirror were estimated by measuring a series of tilted plane substrates and the ellipsoidal substrate. From measurements of an ellipsoidal mirror with a 3.6-mm radius of curvature at the mirror center, we obtained a measurement repeatability of 0.51 nm (root-mean-square) in an assessment area of 0.5 mm × 99.18 mm. This value satisfies the requirements for surface metrology of nano-focusing x-ray mirrors. Thus, the developed metrology system should be applicable for fabricating nano-focusing ellipsoidal mirrors.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

High-throughput sequencing of the chloroplast and mitochondrion of Chlamydomonas reinhardtii to generate improved de novo assemblies, analyze expression patterns and transcript speciation, and evaluate diversity among laboratory strains and wild isolates

Chlamydomonas reinhardtii is a unicellular chlorophyte alga that is widely studied as a reference organism for understanding photosynthesis, sensory and motile cilia, and for development of an algal-based platform for producing biofuels and bio-products. Its highly repetitive, ~205-kbp circular chloroplast genome and ~15.8-kbp linear mitochondrial genome were sequenced prior to the advent of high-throughput sequencing technologies. Here, high coverage shotgun sequencing was used to assemble both organellar genomes de novo. These new genomes correct dozens of errors in the prior genome sequences and annotations. Gen-ome sequencing coverage indicates that each cell contains on average 83 copies of the chloroplast genome and 130 copies of the mitochondrial genome. Using protocols and analyses optimized for organellar tran-scripts, RNA-Seq was used to quantify their relative abundances across 12 different growth conditions. Forty-six percent of total cellular mRNA is attributable to high expression from a few dozen chloroplast genes. RNA-Seq data were used to guide gene annotation, to demonstrate polycistronic gene expression, and to quantify splicing of psaA and psbA introns. In contrast to a conclusion from a recent study, we found that chloroplast transcripts are not edited. Unexpectedly, cytosine-rich polynucleotide tails were observed at the 3’-end of all mitochondrial transcripts. A comparative genomics analysis of eight laboratory strains and 11 wild isolates of C. reinhardtii identified 2658 variants in the organellargenomes, which is 1/10th as much genetic diversity as is found in the nucleus.

ftsH↗

Study of boundary-layer transition using transonic cone Preston tube data

Laminar layer Preston tube data on a sharp nose, ten degree cone obtained in the Ames 11 ft TWT and in flight tests are analyzed. During analyses of the laminar-boundary layer data, errors were discovered in both the wind tunnel and the flight data. A correction procedure for errors in the flight data is recommended which forces the flight data to exhibit some of the orderly characteristics of the wind tunnel data. From corrected wind tunnel data, a correlation is developed between Preston tube pressures and the corresponding values of theoretical laminar skin friction. Because of the uncertainty in correcting the flight data, a correlation for the unmodified data is developed, and, in addition, three other correlations are developed based on different correction procedures. Each of these correlations are used in conjunction with the wind tunnel correlation to define effective freestream unit Reynolds numbers for the 11 ft TWT over a Mach number range of 0.30 to 0.95. The maximum effective Reynolds numbers are approximately 6.5% higher than the normal values. These maximum values occur between freestream Mach numbers of 0.60 and 0.80. Smaller values are found outside this Mach number range. These results indicate wind tunnel noise affects the average laminar skin friction much less than it affects boundary layer transition. Data on the onset, extent, and end of boundary layer transition are summarized. Application of a procedure for studying the relative effects of varying nose radius on a ten degree cone at supercritical speeds indicates that increasing nose radius promotes boundary layer transition and separation of laminar boundary layers.

Reed, T. D.↗

Designing dynamically corrected gates robust to multiple noise sources using geometric space curves

Noise-induced gate errors remain one of the main obstacles to realizing a broad range of quantum information technologies. Dynamical error suppression using carefully designed control schemes is critical for overcoming this challenge. Such schemes must be able to correct against multiple noise sources simultaneously afflicting a qubit to reach error-correction thresholds. Here we present a general framework for designing control fields that simultaneously suppress both noise in the fields themselves as well as transverse dephasing noise. Using the recently developed space curve quantum control formalism, in which robust quantum evolution is mapped to closed geometric curves in a multidimensional Euclidean space, we derive the minimal conditions necessary to guarantee the simultaneous cancellation of both types of noise to leading order. In particular, we find that the cancellation of control field noise requires the derivative of the space curve to have zero-area projections, which is a much more subtle property compared to the closed-curve condition needed to suppress transverse dephasing. We present several techniques for solving both these conditions simultaneously and provide explicit examples of error-resistant control fields. Finally, our work also sheds light on the relation between holonomic evolution and the suppression of control field errors.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Recent Progress in Adjustable X-ray Optics for Astronomy

Two adjustable X-ray optics approaches are being developed for thin grazing incidence optics for astronomy. The first approach employs thin film piezoelectric material sputter deposited as a continuous layer on the back of thin, lightweight Wolter-I mirror segments. The piezoelectric material is used to correct mirror figure errors from fabrication, mounting/alignment, and any ground to orbit changes. The goal of this technology is to produce Wolter mirror segment pairs corrected to 0.5 arc sec image resolution. With the combination of high angular resolution and lightweight, this mirror technology is suitable for the Square Meter Arc Second Resolution Telescope for X-rays (SMART-X) mission concept.. The second approach makes use of electrostrictive adjusters and full shell nickel/cobalt electroplated replication mirrors. An array of radial adjusters is used to deform the full shells to correct the lowest order axial and azimuthal errors, improving imaging performance from the 10 - 15 arc sec level to ~ 5 arc sec. We report on recent developments in both technologies. In particular, we discuss the use of insitu strain gauges on the thin piezo film mirrors for use as feedback on piezoelectric adjuster functionality, including their use for on-orbit figure correction. We also report on the first tests of full shell nickel/cobalt mirror correction with radial adjusters.

Reid, Paul B.↗

Correction to “Stacking Faults Assist Lithium-Ion Conduction in a Halide-Based Superionic Conductor”

A typographical error needs to be corrected in the Results section, subsection “2.5. Evaluation of Li + Ion Conduction Properties”, fourth paragraph, where the activation energy barriers derived from PFG-NMR were swapped for components 1 and 2, for both BM-LYC and SS-LYC. The same error should also corrected in the second paragraph of the Discussion section.

99 GENERAL AND MISCELLANEOUS↗

Net Thermal Radiation in the Atmosphere of Venus

The four entry probes of the Pioneer Venus mission measured the radiative net flux in the atmosphere of Venus at latitudes of 60 deg N, 31 deg S, 27 deg S, and 4 deg N. The three higher latitude probes carried instruments (small probe net flux radiometers; SNFR) with external sensors. The measured SNFR net fluxes are too large below the clouds, but an error source and correction scheme have been found. The near-equatorial probe carried an infrared radiometer (LIR) which viewed the atmosphere through a window in the probe. The LIR measurements are reasonable in the clouds, but increase to physically unreasonable levels shortly below the clouds. The probable error source and a correction procedure are identified. Three main conclusions can be drawn from comparisons of the four corrected flux profiles with radiative transfer calculations: (1) thermal net fluxes for the sounder probe do not require a reduction in the Mode 3 number density as has been suggested, but the probe measurements as a whole are most consistent with a significantly reduced mode 3 contribution to the cloud opacity; (2) at all probe sites, the fluxes imply that the upper cloud contains a yet undetected source of IR opacity; and (3) beneath the clouds the fluxes at a given altitude increase with latitude, suggesting greater IR cooling below the clouds at high latitudes and water vapor mixing ratios of about 2-5 x 10(exp -5) near 60 deg, 2-5 x 10(exp -4) near 30 deg, and greater than 5 x 10(exp -4) near the equator. The suggested latitudinal variation of IR cooling is consistent with descending motions at high latitudes, and it is speculated that it could provide an important additional drive for the general circulation.

Sromovsky, L. A.↗

Influence of the atmospheric masses on the gravitational field of the earth

Seasonal and latitude dependent corrections to the gravity and height anomalies are developed in order to account for the neglect of the atmospheric masses outside the geoid, when using Stokes' equation. It is shown that the atmospheric correction to gravity at sea level is almost constant, equal to 0.871 mgals with a variation of 2 microgals whereas the height anomaly correction varies between -0.1 cm and -1.3 cm. Further, when the combined latitudinal/seasonal dependence is neglected in the atmospheric corrections, the maximum error introduced is on the order of 40 microgals for the gravity corrections and 0.7 cm for the height anomaly corrections.

Christodoulidis, D. C.↗

Detection and avoidance of errors in computer software

The acceptance test errors of a computer software project to determine if the errors could be detected or avoided in earlier phases of development. GROAGSS (Gamma Ray Observatory Attitude Ground Support System) was selected as the software project to be examined. The development of the software followed the standard Flight Dynamics Software Development methods. GROAGSS was developed between August 1985 and April 1989. The project is approximately 250,000 lines of code of which approximately 43,000 lines are reused from previous projects. GROAGSS had a total of 1715 Change Report Forms (CRFs) submitted during the entire development and testing. These changes contained 936 errors. Of these 936 errors, 374 were found during the acceptance testing. These acceptance test errors were first categorized into methods of avoidance including: more clearly written requirements; detail review; code reading; structural unit testing; and functional system integration testing. The errors were later broken down in terms of effort to detect and correct, class of error, and probability that the prescribed detection method would be successful. These determinations were based on Software Engineering Laboratory (SEL) documents and interviews with the project programmers. A summary of the results of the categorizations is presented. The number of programming errors at the beginning of acceptance testing can be significantly reduced. The results of the existing development methodology are examined for ways of improvements. A basis is provided for the definition is a new development/testing paradigm. Monitoring of the new scheme will objectively determine its effectiveness on avoiding and detecting errors.

Kinsler, Les↗