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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 1,567 records · Page 87

TH-EF-BRB-03: Significant Cord and Esophagus Dose Reduction by 4π Non-Coplanar Spine Stereotactic Body Radiation Therapy and Stereotactic Radiosurgery

Purpose: To demonstrate significant organ-at-risk (OAR) sparing achievable with 4π non-coplanar radiotherapy on spine SBRT and SRS patients. Methods: Twenty-five stereotactic spine cases previously treated with VMAT (n = 23) or IMRT (n = 2) were included in this study. A computer-aided-design model of a Linac with a 3D-scanned human surface was utilized to determine the feasible beam space throughout the 4π steradian and beam specific source-to-target-distances (STD) required for collision avoidance. 4π radiotherapy plans integrating beam orientation and fluence map optimization were then created using a column-generation algorithm. Twenty optimal beams were selected for each case. To evaluate the tradeoff between dosimetric benefit and treatment complexity, 4π plans including only isocentrically deliverable beams were also created. Beam angles of all standard and isocentric 4π plans were imported into Eclipse to recalculate the dose using the same calculation engine as the clinical plans for unbiased comparison. OAR and PTV dose statistics for the clinical, standard-4π, and isocentric-4π plans were compared. Results: Comparing standard-4π to clinical plans, particularly significant average percent reduction in the [mean, maximum] dose of the cord and esophagus of [41%, 21.7%], and [38.7%, 36.4%] was observed, along with global decrease in all other OAR dose statistics. The average cord volume receiving more than 50% prescription dose was substantially decreased by 76%. In addition, improved PTV coverage was demonstrated with a maximum dose reduction of 0.93% and 1.66% increase in homogeneity index (D95/D5). All isocentric-4π plans achieved dosimetric performance equivalent to that of the standard-4π plans with higher delivery complexity. Conclusion: 4π radiotherapy significantly improves stereotactic spine treatment dosimetry. With the substantial OAR dose sparing, PTV dose escalation is considerably safer. Isocentric-4π is sufficient to achieve the dosimetric gain. The successful implementation of 4π using an FDA approved planning system paves the way for a prospective clinical trial. Varian Medical Systems, NIH R43CA183390 and R01CA188300, NSF graduate research fellowship DGE-1144087.

60 APPLIED LIFE SCIENCES↗

Multi-omics approach identifies molecular mechanisms of plant-fungus mycorrhizal interaction

In mycorrhizal symbiosis, plant roots form close, mutually beneficial interactions with soil fungi. Before this mycorrhizal interaction can be established however, plant roots must be capable of detecting potential beneficial fungal partners and initiating the gene expression patterns necessary to begin symbiosis. To predict a plant root – mycorrhizal fungi sensor systems, we analyzed in vitro experiments of Populus tremuloides (aspen tree) and Laccaria bicolor (mycorrhizal fungi) interaction and leveraged over 200 previously published transcriptomic experimental data sets, 159 experimentally validated plant transcription factor binding motifs, and more than 120-thousand experimentally validated protein-protein interactions to generate models of pre-mycorrhizal sensor systems in aspen root. These sensor mechanisms link extracellular signaling molecules with gene regulation through a network comprised of membrane receptors, signal cascade proteins, transcription factors, and transcription factor biding DNA motifs. Modeling predicted four pre-mycorrhizal sensor complexes in aspen that interact with fifteen transcription factors to regulate the expression of 1184 genes in response to extracellular signals synthesized by Laccaria. Predicted extracellular signaling molecules include common signaling molecules such as phenylpropanoids, salicylate, and, jasmonic acid. Lastly, this multi-omic computational modeling approach for predicting the complex sensory networks yielded specific, testable biological hypotheses for mycorrhizal interaction signaling compounds, sensor complexes, and mechanisms of gene regulation.

59 BASIC BIOLOGICAL SCIENCES↗

Process Image Analysis using Big Data, Machine Learning, and Computer Vision

Within the DOE complex, 3013 canisters are used to store Pu-bearing waste. Wall penetration due to corrosion, specifically stress corrosion cracking, is considered to be the most likely cause of failure over the 50-year lifetime of the canisters. This project has 2 objectives: The first is the development of machine learning algorithms to identify the presence of corrosion from a very large set of images generated by laser confocal microscope scanning of 3013 canister used to store Pu oxides. This portion of the LDRD constitutes image analysis of a metal surface for the presence of corrosion. The image processing algorithms developed for this project will provide a suitable basis for analysis of other types of corrosion data, which can be produced in vast quantities using modern devices. The second component of the LDRD consists of the development of machine learning algorithms that obtain molecular mechanics force-fields from ab-initio Density Functional Theory (DFT) calculations for corrosive attack by chlorides on 304L or 316L stainless steel. The goal of this latter component is to determine means for mitigating corrosion on a fundamental level, including coatings, welding methods, metal composition, etc. Force-field modeling is necessary for this endeavor because the incipience and progression of corrosion is the governed by molecular structures, grain boundaries, dislocations and surface structures represented by large numbers of atoms. Although DFT calculations are extremely adept at describing molecular scale processes, they are computationally expensive making them ill-suited for calculations of more than several hundred atoms, especially for the repeated applications inherent in material design. Fortunately, force-field methods provide an avenue for viable molecular-scale calculations involving the numbers of atoms involved in corrosion processes. The accuracy of the force-field calculations depends strongly on the accuracy of the force-field model, which is extremely difficult and time-consuming to derive from either data or ab-initio calculations. The use of machine learning algorithms has the potential to make the calculation of force-fields much more efficient but has not been explored significantly for corrosion processes. If shown to be viable, the technique would have wide -ranging impact on design of corrosion resistant materials and on the mitigation of corrosion in existing process systems.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Network-medicine framework for studying disease trajectories in U.S. veterans

A better understanding of the sequential and temporal aspects in which diseases occur in patient’s lives is essential for developing improved intervention strategies that reduce burden and increase the quality of health services. Here we present a network-based framework to study disease relationships using Electronic Health Records from > 9 million patients in the United States Veterans Health Administration (VHA) system. We create the Temporal Disease Network, which maps the sequential aspects of disease co-occurrence among patients and demonstrate that network properties reflect clinical aspects of the respective diseases. We use the Temporal Disease Network to identify disease groups that reflect patterns of disease co-occurrence and the flow of patients among diagnoses. Finally, we define a strategy for the identification of trajectories that lead from one disease to another. The framework presented here has the potential to offer new insights for disease treatment and prevention in large health care systems.

60 APPLIED LIFE SCIENCES↗

WE-FG-207B-09: Experimental Assessment of Noise and Spatial Resolution in Virtual Non-Contrast Dual-Energy CT Images Across Multiple Patient Sizes and CT Systems

Purpose: To investigate the noise and spatial resolution properties of virtual non-contrast (VNC) dual-energy CT images compared to true non-contrast (TNC) images across multiple patient sizes and CT systems. Methods: Torso-shaped water phantoms with lateral widths of 25, 30, 35, 40 and 45 cm and a high resolution bar pattern phantom (Catphan CTP528) were scanned using 2nd and 3rd generation dual-source CT systems (Scanner A: Somatom Definition Flash, Scanner B: Somatom Force, Siemens Healthcare) in dual-energy scan mode with the same radiation dose for a given phantom size. Tube potentials of 80/Sn140 and 100/Sn140 on Scanner A and 80/Sn150, 90/Sn150 and 100/Sn150 on Scanner B were evaluated to examine the impact of spectral separation. Images were reconstructed using a medium sharp quantitative kernel (Qr40), 1.0-mm thickness, 1.0-mm interval and 20 cm field of view. Mixed images served as TNC images. VNC images were created using commercial software (Virtual Unenhanced, Syngo VIA Version VA30, Siemens Healthcare). The noise power spectrum (NPS), area under the NPS, peak frequency of the NPS and image noise were measured for every phantom size and tube potential combination in TNC and VNC images. Results were compared within and between CT systems. Results: Minimal shift in NPS peak frequencies was observed in VNC images compared to TNC for NPS having pronounced peaks. Image noise and area under the NPS were higher in VNC images compared to TNC images across all tube potentials and for scanner A compared to scanner B. Limiting spatial resolution was deemed to be identical between VNC and TNC images. Conclusion: Quantitative assessment of image quality in VNC images demonstrated higher noise but equivalent spatial resolution compared to TNC images. Decreased noise was observed in the 3rd generation dual-source CT system for tube potential pairs having greater spectral separation. Dr. McCollough receives research support from Siemens Healthcare.

60 APPLIED LIFE SCIENCES↗

Climate Intervention Assessment and Attribution

Focal Area(s): To ensure the US is positioned to scientifically attribute noncooperative climate interventions, we propose developing a foundational analytical framework for increased confidence in the assessment and attribution of observed changes in the climate. This framework will enable probabilistic attribution of prospective climate interventions. The target is to glean insight from complex Earth system data (Focal Area 3) by using AI to develop a prediction system comprised of a hierarchy of models (Focal Area 2).

54 ENVIRONMENTAL SCIENCES↗

Co-Evolving Climate Models under Uncertainty to Improve Predictive Skill

Focal Area: Predictive modeling through the use of AI techniques and AI-derived model components; the use of AI and other tools to design a prediction system comprising of a hierarchy of models Science Challenge: Advances in modeling of climate and improved observational capabilities have led to great improvements in understanding large-scale historical climate effects. It however remains a challenge to reliably predict the risk of fine-scale regional climate events on human systems even as such risks are on the rise because warmer and wetter climates are more prone to hydrometeorological extremes,

54 ENVIRONMENTAL SCIENCES↗

Intrinsically stretchable neuromorphic devices for on-body processing of health data with artificial intelligence

For leveraging wearable technologies to advance precision medicine, personalized and learning-based analysis of continuously acquired health data is indispensable, for which neuromorphic computing could provide the most efficient implementation of artificial intelligence (AI) data processing. For realizing on-body neuromorphic computing, skin-like stretchability is required, but yet to be combined with the suite of desired neuromorphic metrics, including linear, symmetric weight update, and sufficient state retention, for achieving high computing efficiency. Here, we report an intrinsically stretchable neuromorphic device based on an electrochemical transistor, which provides a large number (>800) of states, linear/symmetric weight update, excellent switching endurance (>100 million), good state retention (>10 4 s), together with high stretchability of 100% strain. Further integration into a prototype array successfully realized the implementation of vector-matrix multiplication even at 100% strain. Finally, we demonstrate the feasibility of implementing AI-based classification of health signals (as exemplified by electrocardiograms) with a high accuracy that is minimally influenced by the stretched state of the neuromorphic hardware. Finally, this work breaks the ground for combining AI data analysis into skin-like wearable electronics for achieving human-integrated/mimetic intelligent systems.

60 APPLIED LIFE SCIENCES↗

Electronic structure prediction of multi-million atom systems through uncertainty quantification enabled transfer learning

The ground state electron density — obtainable using Kohn-Sham Density Functional Theory (KS-DFT) simulations — contains a wealth of material information, making its prediction via machine learning (ML) models attractive. However, the computational expense of KS-DFT scales cubically with system size which tends to stymie training data generation, making it difficult to develop quantifiably accurate ML models that are applicable across many scales and system configurations. Here, we address this fundamental challenge by employing transfer learning to leverage the multi-scale nature of the training data, while comprehensively sampling system configurations using thermalization. Our ML models are less reliant on heuristics, and being based on Bayesian neural networks, enable uncertainty quantification. We show that our models incur significantly lower data generation costs while allowing confident — and when verifiable, accurate — predictions for a wide variety of bulk systems well beyond training, including systems with defects, different alloy compositions, and at multi-million-atom scales. Moreover, such predictions can be carried out using only modest computational resources.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Quantum Annealing and Thermalization: Insights from Integrability

Here we solve a model that has basic features that are desired for quantum annealing computations: entanglement in the ground state, controllable annealing speed, ground state energy separated by a gap during the whole evolution, and a programmable computational problem that is encoded by parameters of the Ising part of the spin Hamiltonian. Our solution enables exact nonperturbative characterization of final nonadiabatic excitations, including a scaling of their number with the annealing rate and the system size. Finally, we prove that quantum correlations can accelerate computations and, at the end of the annealing protocol, lead to the perfect Gibbs distribution of all microstates.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Shining light on cysteine modification: connecting protein conformational dynamics to catalysis and regulation

We report that cysteine is a rare but functionally important amino acid that is often subject to covalent modification. Cysteine oxidation plays an important role in many human disease processes, and basal levels of cysteine oxidation are required for proper cellular function. Because reactive cysteine residues are typically ionized to the thiolate anion (Cys-S - ), their formation of a covalent bond alters the electrostatic and steric environment of the active site. X-ray-induced photo-oxidation to sulfenic acids (Cys-SOH) can recapitulate some aspects of the changes that occur under physiological conditions. Here we propose how site-specific cysteine photo-oxidation can be used to interrogate ensuing changes in protein structure and dynamics at atomic resolution. Although this powerful approach can connect cysteine covalent modification to global protein conformational changes and function, careful biochemical validation must accompany all such studies to exclude misleading artifacts. Lastly, new types of X-ray crystallography experiments and powerful computational methods are creating new opportunities to connect conformational dynamics to catalysis for the large class of systems that use covalently modified cysteine residues for catalysis or regulation.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Collaborative Proposal: Improving Decadal Prediction of Arctic Climate Variability and Change Using a Regional Arctic System Model (RASM)

RASM is a multi-disciplinary project, which brings together researchers from six state universities, one military postgraduate school, and one DoE laboratory to address the core modeling objectives of the arctic research community articulated in the Arctic System Modeling report by Roberts et al. (2010b). This report advocates the construction of a regional downscaling tool to generate probabilistic decadal projections of Greenland ice sheet retreat, evolution of arctic sea ice cover, changes in land surface vegetation, and regional processes leading to arctic amplification. Unified coupled models such as RASM are ideal for this purpose because they simulate fine-scale physics, essential for the realistic representation of intra-annual variability, in addition to processes fundamental to long term climatic shifts (Hurrell et al. 2009). By using RASM with boundary conditions from a global model, we can generate many-member ensembles essential for understanding uncertainty in regional climate projections (Hawkins and Sutton 2009). This probabilistic approach is computationally prohibitive for high-resolution global models in the foreseeable future, and also for regional models interactively nested within global simulations. Yet it is fundamental for quantifying uncertainty in decadal forecasts to make them useful for decision makers (Doherty et al. 2009). For this reason, we have targeted development of ensemble generation techniques as a core project task (Task 4.5). Environmental impact assessment specialists need high-fidelity regional ensemble projections to improve the accuracy of their work (Challinor et al. 2009; Moss et al. 2010). This is especially true of the Arctic, where economic, social and national interests are rapidly reshaping the high north in step with regional climate change. During the next decade, considerable oil and gas discoveries are expected across many parts of the marine and terrestrial Arctic (Gautier et al. 2009), the economics of the Northern Sea Route will steadily improve (Arctic Council 2009), and sovereign claims over the Arctic Ocean will increasingly be subject to international negotiations (Proelss 2009). Issues such as these have led to an expanding demand for Arctic climate projections to aid national and commercial decisions. However, detailed information from existing models is lacking. RASM will enhance the existing Arctic system modeling capabilities and align them with the scientific and societal needs outlined above. The science involved in the development of RASM will be integrated with teaching and training at a few different levels. RASM PIs will supervise at least six postdoctoral and doctoral students with additional involvement of undergraduate research assistants. RASM postdoctoral fellows and graduate trainees will benefit from being a part of a large, collaborative, and multi-disciplinary research projects employing state-of-the-art modeling and computational tools. They will also have the opportunity to contribute to the UTEP-led education and outreach effort developed specifically for RASM. The UTEP team will use RASM as a platform for education and outreach. First, we will develop products for public dissemination, such as curriculum units, lesson plans and other materials (simulations, movies, and images) for use by students and teachers in high school and university classrooms. Second, we will facilitate bringing RASM PIs, postdocs, and graduate students into the classroom, through electronic mentorship and by contributing content via online lectures and presentations. Third, by the use of problem-based learning (PBL) approaches, we will provide real-world scenarios and problems enabling students to do research and develop position papers or presentations on topics related to RASM. (Problem-based learning is a student-centered, inquiry-based approach in which students work in teams to solve challenging, open-ended problems.) Fourth, we will develop teacher-training materials that will be developed into workshops (face-to-face or online) to help teachers understand how to use the materials we supply. Overall, we will provide a broad, and long-term RASM program for education and outreach. RASM education and outreach activities will target underrepresented populations - in particular, Hispanic students and teachers. For example, the UTEP student body is more than 70 percent Hispanic and 55 percent female, and the majority of students are the first in their families to attend college. Students from underrepresented groups will be given the chance to expand their understanding of the different scientific knowledge and processes associated with RASM. We will develop an eye-catching RASM website to include information about the project, model results and educational materials, and lists of RASM publications and presentations.

54 ENVIRONMENTAL SCIENCES↗

First-principles study of grain-boundary wetting in Fe-Σ5(013)[100] tilt boundary

Here, we report an ab-initio study of grain-boundary wetting (GBW) in three systems (Fe/Zn, Fe/Pb & Fe/Bi) on a Σ5(013)[100] tilt grain boundary. An energy-based approach is pursued and adapted to the study of liquid-metal/solid-metal interfaces. We provide a sound calculation of the wettability parameter S (i.e., defined as the minimum energy difference between the unbroken initial state and final state with liquid-metal/solid-metal interfaces). Solid/liquid interfaces are modelled by ab-initio molecular dynamics, also allowing a study of structural effects in the liquid phase near the solid interface. We show how surface energies for solid-metal/liquid-metal interfaces need a special treatment for the liquid-metal chemical potential due to the change in crystallinity near the interface. The computation of the wettability criterion for the three systems correctly predicts the GBW trend known experimentally for these systems. The computations are compared with small-scale TEM experiments on GBW of two systems (Fe/Pb and Fe/Bi) and it is shown to provide reasonable results. This approach offers new perspectives in predicting GBW trends across various systems.

36 MATERIALS SCIENCE↗

Diffusion of self-propelled particles in complex media

The diffusion of active microscopic organisms in complex environments plays an important role in a wide range of biological phenomena from cell colony growth to single organism transport. Here, we investigate theoretically and computationally the diffusion of a self-propelled particle (the organism) embedded in a complex medium composed of a collection of nonmotile solid particles that mimic soil or other cells. Under such conditions we find that the rotational relaxation time of the swimming direction depends on the swimming velocity and is drastically reduced compared to a pure Newtonian fluid. This leads to a dramatic increase (of several orders of magnitude) in the effective rotational diffusion coefficient of the self-propelled particles, which can lead to “self-trapping” of the active particles in such complex media. An analytical model is put forward that quantitatively captures the computational results. Our work sheds light on the role that the environment plays in the behavior of active systems and can be generalized in a straightforward fashion to understand other synthetic and biological active systems in heterogenous environments.

36 MATERIALS SCIENCE↗

Additive Manufactured Materials Studies

The production of additively manufactured (AM) materials, is a growing technology that potentially offers more cost effective ways to produce metallic components for various uses. Mechanical properties of some AM metals have been studied, but more work is needed to better understand their dynamic properties as a function of orientation. Due to the melting and reheating of molten metal during fabrication, these materials tend to have internal porosity and slightly different microstructures along the weldments and normal to the weldments that may cause the materials to behave differently than their forged counterparts. The AM process builds up a part layer by layer, which provides opportunities to tailor geometry and optimize structural performance in addition to minimizing the amount of material waste for oddly shaped parts, thereby reducing cost. These advanced materials hold great promise for revolutionizing design, fabrication, and assembly of engineered components and could be used for many NNSA-specific applications including armoring complex elements of nuclear weapons, and customized diagnostic components in subcritical experiments. We have conducted materials studies in collaboration with the University of Nevada, Las Vegas (UNLV) as well as Los Alamos National Laboratory (LANL) under our Site-Directed Research and Development program and the Nevada Science Initiative. We are currently placing emphasis on quantifying how dynamic properties are affected by directionality and porosity of the material. A study of dynamic failure events in forged, layered, and additive manufactured (AM) titanium alloy subject to hypervelocity impact was conducted in collaboration with UNLV. Experiments were conducted using a two stage light-gas gun, 0.22-caliber Lexan projectiles, and different types of titanium target plates. A four-channel Photonic Doppler Velocimetry (PDV) system was used to study the free surface velocities to provide an understanding of the different failure mechanisms in these materials. The experimental measurements were used to validate computational simulations, which describe the behavior of these materials under shock. It was determined that AM, forged titanium, and multi-layered stacks produce similar velocity profiles during the early stage of impact, with the AM targets exhibiting spall at lower velocities and the multi-layered stacks exhibiting vibrations between plates. Simulations of solid and layered forged materials provide a good match to experimental data.

36 MATERIALS SCIENCE↗

Full-direct method for imaging pharmacokinetic parameters in dynamic fluorescence molecular tomography

Images of pharmacokinetic parameters (also known as parametric images) in dynamic fluorescence molecular tomography (FMT) can provide three-dimensional metabolic information for biological studies and drug development. However, the ill-posed nature of FMT and the high temporal variation of fluorophore concentration together make it difficult to obtain accurate parametric images in small animals in vivo. In this letter, we present a method to directly reconstruct the parametric images from the boundary measurements based on hybrid FMT/X-ray computed tomography (XCT) system. This method can not only utilize structural priors obtained from the XCT system to mitigate the ill-posedness of FMT but also make full use of the temporal correlations of boundary measurements to model the high temporal variation of fluorophore concentration. The results of numerical simulation and mouse experiment demonstrate that the proposed method leads to significant improvements in the reconstruction quality of parametric images.

60 APPLIED LIFE SCIENCES↗

Accurate and uncertainty-aware multi-task prediction of HEA properties using prior-guided deep Gaussian processes

Surrogate modeling techniques have become indispensable in accelerating the discovery and optimization of high-entropy alloys (HEAs), especially when integrating computational predictions with sparse experimental observations. This study systematically evaluates the training and testing performance of four prominent surrogate models—conventional Gaussian processes (cGP), Deep Gaussian processes (DGP), encoder-decoder neural networks for multi-output regression and eXtreme Gradient Boosting (XGBoost)—applied to a hybrid dataset of experimental and computational properties of the 8-component HEA system Al-Co-Cr-Cu-Fe-Mn-Ni-V. We specifically assess their capabilities in predicting correlated material properties, including yield strength, hardness, modulus, ultimate tensile strength, elongation, and average hardness under dynamic/quasi-static conditions, alongside auxiliary computational properties. The comparison highlights the strengths of hierarchical deep modeling approaches in handling heteroscedastic, heterotopic, and incomplete data commonly encountered in materials science. Our findings illustrate that combined surrogate models such as DGPs infused with machine-learned priors outperform other surrogates by effectively capturing inter-property correlations and by assimilating prior knowledge. This enhanced predictive accuracy positions the combined surrogate models as powerful tools for robust and data-efficient materials design.

36 MATERIALS SCIENCE↗