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FINAL REPORT

Excellent progress was made in standardizing three complementary methods: Magnetic resonance imaging, x-ray micro CT, and MALDI imaging linear ion trap mass spectroscopy to image biomass and chemical, anatomical and functional changes that occur during pretreatment and hydrolysis. Magnetic resonance microscopy provides excellent images with as low as 5 uM resolution with hydrated biomass samples. We visualized dramatic changes in signal associated with the hydrolysis of the carbohydrates by strong acids. Quantitative diffusion approaches were used to probe more subtle structural changes in biomass. Diffusion tensor calculations reflect diffusion anisotropy and fractional anisotropy maps clearly show the longer range diffusion within the vessels compared to within the fiber cells. The diffusion is increased along the cell walls of the vessels. Suggesting that further research with NMR imaging should be pursued. X-ray CT provides excellent images at as low as 3.5 uM resolution from dried biomass. Small increases in surface area, and decreases in local density have been quantified in with wood after mild pretreatments; these changes are expected to be underestimates of the hydrated wood, due to the ~12% shrinkage that occurs upon drying untreated wood. MALDI-MS spectra show high ion intensities at most mass to charge ratios in untreated and pretreated woody material. MALDI-MSn is required to improve specificity and reduce background for imaging. MALDI-TOF is not specific enough for carbohydrate identification. Using MALDI-LIT/MSn we can readily identify oligomeric glucans and xylans and their fragmentation patterns as well as those of the glucuronic acid side chains of birch 4-O-methyl glucuronxylan. Imaging of glucan and xylan oligomers show that many contain isobaric ions with different distributions, indicating again that MSn is needed for accurate imaging of lignocellulosic materials. We are now starting to integrate the three imaging methods by using the same set of biomass samples imaged with all three methods, and using common analytical software to quantify parameters from the three dimensional images. In addition to the proposed experiments, we conducted imaging studies with a novel TOF-SIMS instrument available through collaborations with the AMOLF goup led by Ron Heeren at the FOM Institute in Amersterdam, Netherlands. ToF-SIMS was used to image intact cross sections of Populus stems with high spatial resolution, chemically selectivity. ToF-SIMS images were correlated with fluorescence microscopy which allowed for more positive ion identification.

09 BIOMASS FUELS↗

Geospatial Analysis of Built Infrastructure and Modeled Household Driving Patterns

The level of access to opportunities for a location can be quantified in the amount of time it takes to travel from a departure point to the destinations that somebody would want or need to visit. Isochrone maps are geometric representations of the area accessible from a departure point within a set amount of time. Informed in part by the National Household Travel Survey, this report merges location data for amenities and opportunities across six frequent destination categories – employment, education, health, food, community, and transportation – with isochrone maps generated by the TravelTime API, whose departure points are census tract population-weighted centroids. Using a “Points-In-Polygon” analysis, destinations that fall within a census tract’s isochrone are tallied as accessible from the region within one of three time thresholds: 15-, 30-, and 45-minutes by the walking, cycling, public transit, and driving modes of travel. We find that access to a high number of jobs within a typical commute duration is negatively correlated with annual household vehicle miles traveled (VMT). The spatial distribution of our data suggests that the high household VMT frequently seen surrounding the edges of major cities may be related to worker commutes into the city core, and that the high household VMT frequently seen in rural tracts may be related to the longer travel distances required to access a variety of key opportunities from these areas.

99 GENERAL AND MISCELLANEOUS↗

Investigating the impact of environmental factors on West Nile virus human case prediction in Ontario, Canada

West Nile virus is the most common mosquito borne disease in North America and the leading cause of viral encephalitis. West Nile virus is primarily transmitted between birds and mosquitoes while humans are incidental, dead-end hosts. Climate change may increase the risk of human infections as climatic variables have been shown to affect the mosquito life cycle, biting rate, incubation period of the disease in mosquitoes, and bird migration patterns. We develop a zero-inflated Poisson model to investigate how human West Nile virus case counts vary with respect to mosquito abundance and infection rates, bird abundance, and other environmental covariates. We use a Bayesian paradigm to fit our model to data from 2010–2019 in Ontario, Canada. Our results show mosquito infection rate, temperature, precipitation, and crow abundance are positively correlated with human cases while NDVI and robin abundance are negatively correlated with human cases. We find the inclusion of spatial random effects allows for more accurate predictions, particularly in years where cases are higher. Our model is able to accurately predict the magnitude and timing of yearly West Nile virus outbreaks and could be a valuable tool for public health officials to implement prevention strategies to mitigate these outbreaks.

60 APPLIED LIFE SCIENCES↗

Galactic distribution of pulsars

The density distributions of pulsars in luminosity, period, Z-distance, and galactocentric distance were derived using a uniform sample of pulsars detected during a 408 MHz pulsar survey at Jodrell Bank. There are indications of a fine scale structure in the spatial distribution and evidence that there is a general correlation with other galactic populations and the overall spiral structure. The electron layer in the galaxy is shown to be wider than the pulsar layer and uniform on a large scale. The number of pulsars in the galaxy was estimated and used to derive the pulsar birthrate.

Seiradakis, J. H.↗

Galactic distribution of pulsars

The density distributions of pulsars in luminosity, period, Z-distance, and galactocentric distance were derived, using a uniform sample of pulsars detected during a 408-MHz pulsar survey at Jodrell Bank. There are indications of a fine-scale structure in the spatial distributions and evidence that there is a general correlation with other galactic populations and the overall spiral structure. The electron layer in our galaxy is shown to be wider than the pulsar layer and uniform on a large scale. The number of pulsars in the galaxy has been estimated and used to derive the pulsar birthrate.

Seiradakis, J. H.↗

OSO 8 X-ray spectra of clusters of galaxies. II - Discussion

An observational description of X-ray clusters of galaxies is given based on OSO 8 X-ray results for spatially integrated spectra of 20 such clusters and various correlations obtained from these results. It is found from a correlation between temperature and velocity dispersion that the X-ray core radius should be less than the galaxy core radius or, alternatively, that the polytropic index is about 1.1 for most of the 20 clusters. Analysis of a correlation between temperature and emission integral yields evidence that more massive clusters accumulate a larger fraction of their mass as intracluster gas. Galaxy densities and optical morphology, as they correlate with X-ray properties, are reexamined for indications as to how mass injection by galaxies affects the density structure of the gas. The physical arguments used to derive iron abundances from observed equivalent widths of iron line features in X-ray spectra are critically evaluated, and the associated uncertainties in abundances derived in this manner are estimated to be quite large.

Smith, B. W.↗

Observations of faint comets at McDonald Observatory: 1978-1980

Modern observational techniques, developed for spectroscopy and photometry of faint galaxies and quasars, successfully applied to faint comets on the 2.7 m telescope. The periodic comets Van Biesbrock, Ashbrook-Jackson, Schwassmann-Wachmann 1, Tempel 2, Encke, Forbes, Brooks 2, Stephan-Oterma and the new comets Bradfield (19791), Bowell (1980b), Chernis-Petrauskas (1980k) were observed. The comets ranged in magnitude from 10th to 20th magnitude. For comets fainter than 19th magnitude, reflectance spectra at 100A resolution and area photometry were obtained. On comets of 17th or 18th magnitude, spectrometric scans (6A resolution) of the nucleus or inner coma region. On those comets which are brighter than 16th magnitude spatial spectrophotometric (6A resolution) studies of the inner and extended comae were done. An extensive spatial study of the comae of P/Encke and P/Stephen-Oterma, correlated with heliocentric distance is taking place. The observing process used is described and examples of the results obtained to date are discussed.

Barker, E. S.↗

Characteristics of gamma-ray line flares

Observations of solar gamma rays by the Solar Maximum Mission (SMM) demonstrate that energetic protons and ions are rapidly accelerated during the impulsive phase. To understand the acceleration mechanisms for these particles, the characteristics of the gamma ray line flares observed by SMM were studied. Some very intense hard X-ray flares without detectable gamma ray lines were also investigated. Gamma ray line flares are distinguished from other flares by: (1) intense hard X-ray and microwave emissions; (2) delay of high energy hard X-rays; (3) emission of type 2 and/or type 4 radio bursts; and (4) flat hard X-ray spectra (average power law index: 3.1). The majority of the gamma ray line flares shared all these characteristics, and the remainder shared at least three of them. Positive correlations were found between durations of spike bursts and spatial sizes of flare loops as well as between delay times and durations of spike bursts.

Bai, T.↗

Spatial electron density and electric field strength measurements in microwave cavity experiments

Measurements of electron density and electric field strength have been made in an argon plasma contained in a resonant microwave cavity at 2.45 GHz. Spatial measurements of electron density, n sub e, are correlated with fluorescence observations of the discharge. Measurements of n sub e were made with Stark broadening and compared with n sub 3 calculated from measured plasma conductivity. Additional measurements of n sub 3 as a function of pressure and in mixtures of argon and oxygen are presented for pressures from 10 Torr to 1 atm. Measurements in flowing gases and in static systems are presented. In addition, limitations of these measurements are identified.

Peters, M.↗

Spatial electron density and electric field strength measurements in microwave cavity experiments

Measurements of electron density and electric field strength have been made in an argon plasma contained in a resonant microwave cavity at 2.45 GHz. Spatial measurements of electron density, n sub e, are correlated with fluorescence observations of the discharge. Measurements of n sub e were made with Stark broadening and compared with n sub e calculated from measured plasma conductivity. Additional measurements of n sub e as a function of pressure and in mixtures of argon and oxygen are presented for pressures from 10 Torr to 1 atm. Measurements in flowing gases and in static systems are presented. In addition, limitations of these measurements are identified.

Peters, M.↗

Characteristics of gamma-ray line flares

Observations of solar gamma rays by the Solar Maximum Mission (SMM) demonstrate that energetic protons and ions are rapidly accelerated during the impulsive phase. To understand the acceleration mechanisms for these particles, the characteristics of the gamma ray line flares observed by SMM were studied. Some very intense hard X-ray flares without detectable gamma ray lines were also investigated. Gamma ray line flares are distinguished from other flares by: (1) intense hard X-ray and microwave emissions; (2) delay of high energy hard X-rays, (3) emission of type 2 and/or type 4 radio bursts; and (4) flat hard X-ray spectra (average power law index: 3.1). The majority of the gamma ray line flares shared all these characteristics, and the remainder shared at least three of them. Positive correlations were found between durations of spike bursts and spatial sizes of flare loops as well as between delay times and durations of spike bursts.

Bai, T.↗

Fracto-emission accompanying adhesive failure

The fractoemission characteristics of various material interfaces have been investigated experimentally. The interfaces studied include brittle materials/epoxy, glass/elastomers and brittle materials/pressure sensitive adhesives. Results are presented for both large (1 sq cm) planar surfaces together with a few small microns fibers (E-glass, S-glass, Kevlar, and graphite), and a small (10-500 micron) particles in polymer matrices. The composition and energies of the particles emitted during adhesive failure were measured over a wide range of time scales by means of conventional particle counting techniques and photon imaging. Measurements of the time dependence, energy distribution, crack velocity dependence, and spatial distribution of fractoemissive particles are also presented. Some correlations between the various fractoemission components are described in detail.

Dickinson, J. T.↗

Solar wind observations near the sun

Observations of interplanetary scintillations with the VLA telescope are reported. The solar wind in the accelerating region from 3 to 12 solar radii was observed by scintillation of the radio source 3C279. The results obtained outside of 7 solar radii showed good agreement with previous work but observations between 3 and 4.5 solar radii were new and unexpected. Turbulence in the solar wind has a spatially anisotropic structure elongated in the radial direction, the flow direction being also in the radial direction. An abrupt change of both the velocity and the spatial anisotropy of turbulence was found at distances from 3 to 4.5 solar radii. There is a large random velocity component inside of 12 solar radii which is comparable to the bulk flow speed, and it has a spatially anisotropic probability distribution. From the measured cross-correlation functions, evidence which may be related to the complex structure of the magnetic field is found.

Armstrong, J. W.↗

Atmospheric conditions during the spring and fall transitions in the coastal ocean off western United States

Atmospheric events which force the spring and fall oceanic transitions in the coastal ocean off the west coast of North America were examined by analyzing the records of adjusted sea level (ASL), coastal wind stress, sea level atmospheric pressure (SLP), and 500-mbar heights for the years 1971-1975 and 1980-1983. The records cover periods of 91 days, centered on the dates of the spring and fall transitions as determined from coastal ASL data. It was found that the dominant mode of the ASL and coastal wind stress are similar around the times of both the spring and fall transitions, and that the time series for these modes are highly correlated with one another. Principal estimator patterns show the spatial patterns of SLP which force the ASL and coastal wind stress during the transitions.

Strub, P. Ted↗

The influence of processor focus on speckle correlation statistics for a Shuttle imaging radar scene of Hurricane Josephine

The surface wave field produced by Hurricane Josephine was imaged by the L-band SAR aboard the Challenger on October 12, 1984. Exponential trends found in the two-dimensional autocorrelations of speckled image data support an equilibrium theory model of sea surface hydrodynamics. The notions of correlated specular reflection, surface coherence, optimal Doppler parameterization and spatial resolution are discussed within the context of a Poisson-Rayleigh statistical model of the SAR imaging process.

Tilley, David G.↗

Design of coupled mace filters for optical pattern recognition using practical spatial light modulators

Spatial light modulators (SLMs) are being used in correlation-based optical pattern recognition systems to implement the Fourier domain filters. Currently available SLMs have certain limitations with respect to the realizability of these filters. Therefore, it is necessary to incorporate the SLM constraints in the design of the filters. The design of a SLM-constrained minimum average correlation energy (SLM-MACE) filter using the simulated annealing-based optimization technique was investigated. The SLM-MACE filter was synthesized for three different types of constraints. The performance of the filter was evaluated in terms of its recognition (discrimination) capabilities using computer simulations. The correlation plane characteristics of the SLM-MACE filter were found to be reasonably good. The SLM-MACE filter yielded far better results than the analytical MACE filter implemented on practical SLMs using the constrained magnitude technique. Further, the filter performance was evaluated in the presence of noise in the input test images. This work demonstrated the need to include the SLM constraints in the filter design. Finally, a method is suggested to reduce the computation time required for the synthesis of the SLM-MACE filter.

Rajan, P. K.↗

Perceptual Classification Images from Vernier Acuity Masked by Noise

Letting external noise rather than internal noise limit discrimination performance allows information to be extracted about the observer's stimulus classification rule. A perceptual classification image is the correlation over trials between the noise amplitude at a spatial location and the observer's responses. If, for example, the observer followed the rule of the ideal observer, the perceptual classification image would be an estimate of the ideal observer filter, the difference between the two unmasked images being discriminated. Perceptual classification images were estimated for a vernier discrimination task. The display screen had 48 pixels per degree horizontally and vertically. The no-offset image had a dark horizontal line of 4 pixels, a 1 pixel space, and 4 more dark pixels. Classification images were based on 1600 discrimination trials with the line contrast adjusted to keep the error rate near 25 percent. In the offset image, the second line was one pixel higher. Unlike the ideal observer filter (a horizontal dipole), the observer perceptual classification images are strongly oriented. Fourier transforms of the classification images had a peak amplitude near one cycle per degree and an orientation near 25 degrees. The spatial spread is much more than image blur predicts, and probably indicates the spatial position uncertainty in the task.

Ahumada, A. J.↗