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At least 163 records · Page 9
All sourcesNASA NTRSDOE OSTI
NASA NTRS1983

Relationships between chlorophyll density and ocean radiance as measured by U2/OCS: Algorithms, examples and comparison

An ocean atmosphere radiative transfer process computation method which is suitable for determining lower boundary ocean albedo and other radiation components from spectral measurements of upwelling radiance taken from a high altitude platform is described. The method was applied to a set of color scanner data taken from slope water of the South Atlantic Bight to determine the influence of cholorophyll-a pigments in the sea on the ratio of upwelling radiance to down welling irradiance as a function of wavelength. The resulting chlorophyll concentrations are compared with measurements made by ships stationed along the flight path.

Kim, H. H.↗
NASA NTRS1984

Sensitivity of airborne fluorosensor measurements to linear vertical gradients in chlorophyll concentration

A semianalytic Monte Carlo radiative transfer simulation model for airborne laser fluorosensors has been extended to investigate the effects of inhomogeneities in the vertical distribution of phytoplankton concentrations in clear seawater. Simulation results for linearly varying step concentrations of chlorophyll are presented. The results indicate that statistically significant differences can be seen under certain conditions in the water Raman-normalized fluorescence signals between nonhomogeneous and homogeneous cases. A statistical test has been used to establish ranges of surface concentrations and/or verticl gradients in which calibration by surface samples would by inappropriate, and the results are discussed.

Venable, D. D.↗
NASA NTRS1986

Laser and sunlight-induced fluorescence from chlorophyll pigments

Fluorescence properties of chlorophyll pigment bearing plant foliage utilizing a 337 nm nitrogen laser and integrating sphere were studied. Measured yields, in terms of number of photons emitted per 100 photons absorbed, range from 1.5 to 0.1 for the 685 nm peak, and from 4.2 to 0.2 for the 730 nm peak. Decreasing order of magnitude puts herbaceous leaves ahead of all others followed by broad leaves of hardwoods and coniferous needles. Meaningful quantization for the fluorescence peaks at 430 and 530 nm could not be attained. Passive monitoring of these fluorescence peaks is successful only for the 685 nm from the ocean surface. Field data show the reflectance changes at 685 nm due to the algae presence amounts to 1% at most.

Kim, H. H.↗
NASA NTRS1988

Time evolution of surface chlorophyll patterns from cross-spectrum analysis of satellite color images

The rate of decorrelation of surface chlorophyll patterns as a function of the time separation between pairs of images was determined from two sequences of CZCS images of the Pacific Ocean area adjacent to Vancouver Island, Canada; cloud-free subareas were selected that were common to several images separated in time by 1-17 days. Image pairs were subjected to two-dimensional autospectrum and cross-spectrum analysis in an array processor, and squared coherence estimates found for several wave bands were plotted against time separation, in analogy with a time-lagged cross correlation function. It was found that, for wavelengths of 50-150 km, significant coherence was lost after 7-10 days, while for wavelengths of 25-50 km, significant coherence was lost after only 5-7 days. In both cases, offshore regions maintained coherence longer than coastal regions.

Denman, Kenneth L.↗
NASA NTRS1989

The use of aircraft and satellite remote sensing of phytoplankton chlorophyll concentrations in case 2 estuarine waters of the Chesapeake Bay

Two projects using remote sensing of phytoplankton chlorophyll concentrations in the Chesapeake Bay estuary were proposed. The first project used aircraft remote sensing with a compact radiometer system developed at NASA's Goddard Space Flight Center (GSFC), the Ocean Data Acquisition System (ODAS). ODAS includes three radiometers at 460, 490, and 520 nm, an infrared temperature sensor (PRT-5), Loran-C for navigation, and a data acquisition system using a PC and mass storage device. This instrument package can be flown in light aircraft at relatively low expense, permitting regular and frequent flights. Sixteen flights with ODAS were completed using the Virginia Institute of Marine Science's De Havilland 'Beaver'. The goal was to increase spatial and temporal resolution in assaying phytoplankton pigment concentrations in the Chesapeake. At present, analysis is underway of flight data collected between March and July 1989. The second project focused on satellite data gathered with the Nimbus-7 Coastal Zone Color Scanner (CZSC) between late 1978 and mid 1986. The problem in using CZSC data for the Chesapeake Bay is that the optical characteristics of this (and many) coastal and estuarine waters are distinct from those of the open ocean for which algorithms for computing pigment concentrations were developed. The successful use of CZCS data for the estuary requires development of site-specific algorithms and analytical approaches. Of principal importance in developing site-specific procedures is the availability of in-situ data on pigment concentrations. A significant data set was acquired from EPA's Chesapeake Bay Program in Annapolis, Maryland, and clear satellite scenes are being analyzed for which same-day sea truth measurements of pigment were obtained. Both the University of Miami and GSFC Seapak systems are being used in this effort. The main finding to date is an expected one, i.e., the algorithms developed for oceanic waters are inadequate to compute pigment concentrations for the Case 2 waters of the Chesapeake Bay. One reason is the overestimation of aerosol radiances by assuming that water-leaving radiance in Band 4 of CZCS (670 nm) is zero, an assumption that is invalid for the Bay. This prompted any attempts to iterative procedures for estimating the proportion of the Band 4 radiance that is actually attributable to aerosol by estimating the water-leaving component using optical data. A cruise on the Chesapeake the week of 7 August 1989 was conducted to collect additional optical data necessary to this task.

Harding, Lawrence W., Jr.↗
NASA NTRS1991

Estimation of time averages from irregularly spaced observations - With application to coastal zone color scanner estimates of chlorophyll concentration

The sampling error of an arbitrary linear estimate of a time-averaged quantity constructed from a time series of irregularly spaced observations at a fixed located is quantified through a formalism. The method is applied to satellite observations of chlorophyll from the coastal zone color scanner. The two specific linear estimates under consideration are the composite average formed from the simple average of all observations within the averaging period and the optimal estimate formed by minimizing the mean squared error of the temporal average based on all the observations in the time series. The resulting suboptimal estimates are shown to be more accurate than composite averages. Suboptimal estimates are also found to be nearly as accurate as optimal estimates using the correct signal and measurement error variances and correlation functions for realistic ranges of these parameters, which makes it a viable practical alternative to the composite average method generally employed at present.

Chelton, Dudley B.↗
NASA NTRS1992

In Vivo and in Vitro Chlorophyll-a and Pheophytin-a Concentration Measurements by Laser Fluorometry

Discussed here is the application of a laser fluorescent technique in in vivo and in vitro phyto- and zooplankton analysis involving popular lasers, an impulse YAG laser (lambda = 532 nm) and a steady state He-Cd (lambda = 440 nm). The YAG laser is widely used in laser remote sensing of seawater photoplankton in situ mode, but here we give special attention to its use in the precise estimation of phytoplankton pigments using laser induced fluorescence. The He-Cd laser is a novice in this field and, we believe, very promising. Our methods enable one to detect, in viro, chlorophyll-a (Chl-a) concentration in the water probe up to 10 nanograms per liter, and to measure, in vitro, Chl-a and pheophytin-a (Ph-a) concentrations in acetone extracts of phyto- and zooplankton up to 1 nanogram per liter.

Demidov, A. A.↗
NASA NTRS2000

BOREAS TE-9 NSA Leaf Chlorophyll Density

The BOREAS TE-9 team collected several data sets related to chemical and photosynthetic properties of leaves in boreal forest tree species. These data were collected to help provide an explanation of potential seasonal and spatial changes of leaf pigment properties in boreal forest species at the NSA. At different dates (FFC-Winter, FFC-Thaw, IFC-1, IFC-2, and IMC-3), foliage samples were collected from the upper third of the canopy for five NSA sites (YJP, OJP, OBS, UBS, and OA) near Thompson, Manitoba. Subsamples of 100 needles for black spruce, 20 needles for jack pine, and single leaf for trembling aspen were cut into pieces and immersed in a 20-mL DMF aliquot in a Nalgene test tube. The extracted foliage materials were then oven-dried at 68 C for 48 hours and weighed. Extracted leaf dry weight was converted to a total leaf area basis to express the chlorophyll content in mg/sq cm of total leaf area. The data are provided in tabular ASCII files. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC).

Hall, Forrest G.↗
NASA NTRS2001

Sources of Variability in Chlorophyll Analysis by Fluorometry and by High Performance Liquid Chromatography

The need for accurate determination of chlorophyll a (chl a) is of interest for numerous reasons. From the need for ground-truth data for remote sensing to pigment detection for laboratory experimentation, it is essential to know the accuracy of the analyses and the factors potentially contributing to variability and error. Numerous methods and instrument techniques are currently employed in the analyses of chl a. These methods range from spectrophotometric quantification, to fluorometric analysis and determination by high performance liquid chromatography. Even within the application of HPLC techniques, methods vary. Here we provide the results of a comparison among methods and provide some guidance for improving the accuracy of these analyses. These results are based on a round-robin conducted among numerous investigators, including several in the Sensor Intercomparison and Merger for Biological and Interdisciplinary Oceanic Studies (SIMBIOS) and HyCODE Programs. Our purpose here is not to present the full results of the laboratory intercalibration; those results will be presented elsewhere. Rather, here we highlight some of the major factors that may contribute to the variability observed. Specifically, we aim to assess the comparability of chl a analyses performed by fluorometry and HPLC, and we identify several factors in the analyses which may contribute disproportionately to this variability.

VanHeukelem, Laurie↗
NASA NTRS2002

Contribution of Chlorophyll Fluorescence to the Reflectance of Corn Foliage

To assess the contribution of chlorophyll fluorescence (ChlF) to apparent reflectance (Ra) in the red/far-red, spectra were collected on a C4 agricultural species (corn, Zea Mays L.) under conditions ranging from nitrogen deficiency to excess. A significant contribution of ChlF to Ra was observed, with on average 10-25% at 685nm and 2-6% at 740nm of Ra being due to ChlF. Higher ChlF was consistently measured from the abaxial leaf surface as compared to the adaxial. Using 350-665nm excitation, the study confirms the trends in three ChlF ratios established previously by active F technology, suggesting that the ChlF utility this technology has developed for monitoring vegetation physiological status is likely applicable also under natural solar illumination.

Campbell, Petya K. Entcheva↗
NASA NTRS2002

Sources of Variability in Chlorophyll Analysis by Fluorometry and High-Performance Liquid Chromatography in a SIMBIOS Inter-Calibration Exercise

The purpose of this technical report is to provide current documentation of the Sensor Intercomparison and Merger for Biological and Interdisciplinary Oceanic Studies (SIMBIOS) Project activities, NASA Research Announcement (NRA) research status, satellite data processing, data product validation, and field calibration. This documentation is necessary to ensure that critical information is related to the scientific community and NASA management. This critical information includes the technical difficulties and challenges of validating and combining ocean color data from an array of independent satellite systems to form consistent and accurate global bio-optical time series products. This technical report is not meant as a substitute for scientific literature. Instead, it will provide a ready and responsive vehicle for the multitude of technical reports issued by an operational project. This particular document focus on the variability in chlorophyll pigment measurements resulting from differences in methodologies and laboratories conducting the pigment analysis.

VanHeukelem, Laurie↗
NASA NTRS2002

Retrieval Of Cloud Pressure And Chlorophyll Content Using Raman Scattering In GOME Ultraviolet Spectra

Reliable cloud pressure estimates are needed for accurate retrieval of ozone and other trace gases using satellite-borne backscatter ultraviolet (buv) instruments such as the global ozone monitoring experiment (GOME). Cloud pressure can be derived from buv instruments by utilizing the properties of rotational-Raman scattering (RRS) and absorption by O2-O2. In this paper we estimate cloud pressure from GOME observations in the 355-400 nm spectral range using the concept of a Lambertian-equivalent reflectivity (LER) surface. GOME has full spectral coverage in this range at relatively high spectral resolution with a very high signal-to-noise ratio. This allows for much more accurate estimates of cloud pressure than were possible with its predecessors SBUV and TOMS. We also demonstrate the potential capability to retrieve chlorophyll content with full-spectral buv instruments. We compare our retrieved LER cloud pressure with cloud top pressures derived from the infrared ATSR instrument on the same satellite. The findings confirm results from previous studies that showed retrieved LER cloud pressures from buv observations are systematically higher than IR-derived cloud-top pressure. Simulations using Mie-scattering radiative transfer algorithms that include O2-O2 absorption and RRS show that these differences can be explained by increased photon path length within and below cloud.

Atlas, Robert↗
NASA NTRS2001

Utilization of an Airborne Plant Chlorophyll Imaging System for Detection of Septic System Malfunction

Malfunctioning, or leaking, sewer systems increase the supply of water and nutrients to surface vegetation. Excess nutrients and harmful bacteria in the effluent pollute ground water and local water bodies and are dangerous to humans and the aquatic ecosystems. An airborne multispectral plant chlorophyll imaging system (PCIS) was used to identify growth patterns in the vegetation covering onsite and public sewer systems. The objective was to evaluate overall performance of the PCIS as well as to determine the best operational configuration for this application. The imaging system was flown in a light aircraft over selected locations Mobile County, Alabama. Calibration panels were used to help characterize instrument performance. Results demonstrated that the PCIS performed well and was capable of detecting septic leakage patterns from altitudes as high as 915 m. From 915 m, 6 of 18 sites were suspected to have sewage leakage. Subsequent ground inspections confirmed leakage on 3 of the 6 sites. From 610 m, 3 of 8 known leakage sites were detected. Tree cover and shadows near residential structures prevented detection of several known malfunctioning systems. Also some leakages known to occur in clear areas were not detected. False detections occurred in areas characterized by surface water drainage problems or recent excavation.

Spiering, Bruce A.↗
NASA NTRS1996

Sequence of the bchG gene from Chloroflexus aurantiacus: relationship between chlorophyll synthase and other polyprenyltransferases

The sequence of the Chloroflexus aurantiacus open reading frame thought to be the C. aurantiacus homolog of the Rhodobacter capsulatus bchG gene is reported. The BchG gene product catalyzes esterification of bacteriochlorophyllide a by geranylgeraniol-PPi during bacteriochlorophyll a biosynthesis. Homologs from Arabidopsis thaliana, Synechocystis sp. strain PCC6803, and C. aurantiacus were identified in database searches. Profile analysis identified three related polyprenyltransferase enzymes which attach an aliphatic alcohol PPi to an aromatic substrate. This suggests a broader relationship between chlorophyll synthases and other polyprenyltransferases.

NASA Program Exobiology↗
NASA NTRS2006

Remote Versus Local Forcing of Chlorophyll Variability in the South Atlantic Bight

This TM documents results of analyses addressing the local versus remote forcing of chlorophyll variability on the shelf and slope regions of the South Atlantic Bight (SAB) based on satellite-derived products and a limited amount of in situ data. This study is part of a larger multi-disciplinary, multi-institutional effort to study the Eastern U.S. Continental Shelf carbon budget (U.S. Eastern Continental Shelf Carbon Budget: Modeling, Data Assimilation, and Analysis, U.S. ECoS), a project funded by the NASA Earth System Enterprise Interdisciplinary Science Program that started in the summer of 2004.

Signorini, Sergio R.↗
NASA NTRS2007

Comparison of Measurements and FluorMOD Simulations for Solar Induced Chlorophyll Fluorescence and Reflectance of a Corn Crop under Nitrogen Treatments [SIF and Reflectance for Corn]

The FLuorescence Explorer (FLEX) satellite concept is one of six semifinalist mission proposals selected in 2006 for pre-Phase studies by the European Space Agency (ESA). The FLEX concept proposes to measure passive solar induced chlorophyll fluorescence (SIF) of terrestrial ecosystems. A new spectral vegetation Fluorescence Model (FluorMOD) was developed to include the effects of steady state SIF on canopy reflectance. We used our laboratory and field measurements previously acquired from foliage and canopies of corn (Zea mays L.) under controlled nitrogen (N) fertilization to parameterize and evaluate FluorMOD. Our data included biophysical properties, fluorescence (F) and reflectance spectra for leaves; reflectance spectra of canopies and soil; solar irradiance; plot-level leaf area index; and canopy SIF emissions determined using the Fraunhofer Line Depth principal for the atmospheric telluric oxygen absorption features at 688 nm (O2-beta) and 760 nm (O2-alpha). FluorMOD simulations implemented in the default "look-up-table" mode did not reproduce the observed magnitudes of leaf F, canopy SIF, or canopy reflectance. However, simulations for all of these parameters agreed with observations when the default FluorMOD information was replaced with measurements, although N treatment responses were underestimated. Recommendations were provided to enhance FluorMOD's potential utility in support of SIF field experiments and studies of agriculture and ecosystems.

Middleton, Elizabeth M.↗
NASA NTRS2000

Plant chlorophyll content meter

A plant chlorophyll content meter is described which collects light reflected from a target plant and separates the collected light into two different wavelength bands. These wavelength bands, or channels, are described as having center wavelengths of 700 nm and 840 nm. The light collected in these two channels are processed using photo detectors and amplifiers. An analog to digital converter is described which provides a digital representation of the level of light collected by the lens and falling within the two channels. A controller provided in the meter device compares the level of light reflected from a target plant with a level of light detected from a light source, such as light reflected by a target having 100% reflectance, or transmitted through a diffusion receptor. The percent of reflection in the two separate wavelength bands from a target plant are compared to provide a ratio which indicates a relative level of plant physiological stress. A method of compensating for electronic drift is described where a sample is taken when a collection lens is covered to prevent light from entering the device. This compensation method allows for a more accurate reading by reducing error contributions due to electronic drift from environmental conditions at the location where a hand-held unit is used.

Spiering, Bruce A.↗
NASA NTRS2008

Remote Sensing of the Absorption Coefficients and Chlorophyll a Concentration in the U.S. Southern Middle Atlantic Bight from SeaWiFS and MODIS-Aqua

At present, satellite remote sensing of coastal water quality and constituent concentration is subject to large errors as compared to the capability of satellite sensors in oceanic waters. In this study, field measurements collected on a series of cruises within U.S. southern Middle Atlantic Bight (SMAB) were applied to improve retrievals of satellite ocean color products in order to examine the factors that regulate the bio-optical properties within the continental shelf waters of the SMAB. The first objective was to develop improvements in satellite retrievals of absorption coefficients of phytoplankton (a(sub ph)), colored dissolved organic matter (CDOM) (a(sub g)), non-pigmented particles (a(sub d)), and non-pigmented particles plus CDOM (a(sub dg)), and chlorophyll a concentration ([Chl_a]). Several algorithms were compared to derive constituent absorption coefficients from remote sensing reflectance (R(sub rs)) ratios. The validation match-ups showed that the mean absolute percent differences (MAPD) were typically less than 35%, although higher errors were found for a(sub d) retrievals. Seasonal and spatial variability of satellite-derived absorption coefficients and [Chl_a] was apparent and consistent with field data. CDOM is a major contributor to the bio-optical properties of the SMAB, accounting for 35-70% of total light absorption by particles plus CDOM at 443 nm, as compared to 30-45% for phytoplankton and 0-20% for non-pigmented particles. The overestimation of [Chl_a] from the operational satellite algorithms may be attributed to the strong CDOM absorption in this region. River discharge is important in controlling the bio-optical environment, but cannot explain all of the regional and seasonal variability of biogeochemical constituents in the SMAB.

Pan, Xiaoju↗