Search NASA⌕ Search

SEARCH · Search NASA

Results for “COMPUTER NETWORKS”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 163 records · Page 9
All sourcesNASA NTRSDOE OSTI
DOE OSTI2014

Amplify scientific discovery with artificial intelligence

Computing innovations have fundamentally changed many aspects of scientific inquiry. For example, advances in robotics, high-end computing, networking, and databases now underlie much of what we do in science such as gene sequencing, general number crunching, sharing information between scientists, and analyzing large amounts of data. As computing has evolved at a rapid pace, so too has its impact in science, with the most recent computing innovations repeatedly being brought to bear to facilitate new forms of inquiry. Recently, advances in Artificial Intelligence (AI) have deeply penetrated many consumer sectors, including for example Apple’s Siri™ speech recognition system, real-time automated language translation services, and a new generation of self-driving cars and self-navigating drones. However, AI has yet to achieve comparable levels of penetration in scientific inquiry, despite its tremendous potential in aiding computers to help scientists tackle tasks that require scientific reasoning. We contend that advances in AI will transform the practice of science as we are increasingly able to effectively and jointly harness human and machine intelligence in the pursuit of major scientific challenges.

artificial intelligence↗
DOE OSTI2021

Quantum computing based hybrid deep learning for fault diagnosis in electrical power systems

Quantum computing (QC) and deep learning have shown promise of supporting transformative advances and have recently gained popularity in a wide range of areas. Here, this paper proposes a hybrid QC-based deep learning framework for fault diagnosis of electrical power systems that combine the feature extraction capabilities of conditional restricted Boltzmann machine with an efficient classification of deep networks. Computational challenges stemming from the complexities of such deep learning models are overcome by QC-based training methodologies that effectively leverage the complementary strengths of quantum assisted learning and classical training techniques. The proposed hybrid QC-based deep learning framework is tested on a simulated electrical power system with 30 buses and wide variations of substation and transmission line faults, to demonstrate the framework’s applicability, efficiency, and generalization capabilities. High computational efficiency is enjoyed by the proposed hybrid approach in terms of computational effort required and quality of diagnosis performance over classical training methods. In addition, superior and reliable fault diagnosis performance with faster response time is achieved over state-of-the-art pattern recognition methods based on artificial neural networks (ANN) and decision trees (DT).

42 ENGINEERING↗
DOE OSTI2016

Computer systems for annotation of single molecule fragments

There are provided computer systems for visualizing and annotating single molecule images. Annotation systems in accordance with this disclosure allow a user to mark and annotate single molecules of interest and their restriction enzyme cut sites thereby determining the restriction fragments of single nucleic acid molecules. The markings and annotations may be automatically generated by the system in certain embodiments and they may be overlaid translucently onto the single molecule images. An image caching system may be implemented in the computer annotation systems to reduce image processing time. The annotation systems include one or more connectors connecting to one or more databases capable of storing single molecule data as well as other biomedical data. Such diverse array of data can be retrieved and used to validate the markings and annotations. The annotation systems may be implemented and deployed over a computer network. They may be ergonomically optimized to facilitate user interactions.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Denial of Service Attack Detection via Differential Analysis of Generalized Entropy Progressions

Denial-of-Service (DoS) attacks are one the most common and consequential cyber attacks in computer networks. While existing research offers a plethora of detection methods, the issue of achieving scalability, a low false positive rate, and high detection accuracy remains open. In this work, we address this problem by developing a differential method based on generalized entropy progression. In this method, named as DoDGE, we continuously fit the line of best fit to the entropy progression of destination addresses and check if the derivative, that is, the slope of this line is less than the negative of the dynamically computed standard deviation of the derivatives. Furthermore, to distinguish from flash events, we leverage the symmetry that when a flash event occurs, the derivative of the entropy progression of source addresses is positive. With this design, we omit the usage of the thresholds and the results with five real-world network traffic datasets confirm that DoDGE outperforms threshold-based DoS attack detection by two orders of magnitude in terms of false positives on average. When compared to ten machine learning (ML) models, DoDGE achieves a balanced accuracy of 99%, while the average balanced accuracy for the ML models is 52%. Moreover, the results show that DoDGE successfully differentiates between a flash event and a DoS attack. Furthermore, since the main computation cost of DoDGE is the entropy computation, which is linear in the volume of the unit-time network flow, uses integer only operations, and works on a small fraction of the total flow, it is lightweight and scalable.

Cybersecurity, wireless communication↗
DOE OSTI2023

Securely Aggregated Coded Matrix Inversion

Coded computing is a method for mitigating straggling workers in a centralized computing network, by using erasure-coding techniques. Federated learning is a decentralized model for training data distributed across client devices. In this work we propose approximating the inverse of an aggregated data matrix, where the data is generated by clients; similar to the federated learning paradigm, while also being resilient to stragglers. To do so, we propose a coded computing method based on gradient coding. We modify this method so that the coordinator does not access the local data at any point; while the clients access the aggregated matrix in order to complete their tasks. Here, the network we consider is not centrally administrated, and the communications which take place are secure against potential eavesdroppers.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2021

Iteration-based Linearized Distribution-level Locational Marginal Price for Three-phase Unbalanced Distribution Systems

Distributed energy resources (DERs) are rocking the utilities’ business landscape. It calls for competitive market environments that incentivize DERs to form maximum operating efficiency. Among proposed pricing schemes, distribution-level locational marginal price (DLMP) is effective in signaling the marginal generation cost differences driven by energy losses and network constraints. It can be derived from a distribution-level optimal power flow (OPF) framework, as it essentially presents the sensitivity of optimized generation cost towards incremental loads. However, due to the high resistance-to-inductance ratio and unbalanced characteristics of distribution networks, computational affordable DLMPs are highly challenged. This article provides a linear-approximated DLMP that can be solved efficiently and generalized to account for reactive power flow, three-phase unbalanced loads and meshed network structure. The successive linear programming technique is introduced to enhance the model accuracy. Case studies on an IEEE 123-Bus system validate its accuracy against a nonlinear benchmark and capability in offering proper incentives.

24 POWER TRANSMISSION AND DISTRIBUTION↗
DOE OSTI2021

SMC 2021 : Analyzing Resource Utilization and User Behavior on Titan Supercomputer

Resource utilization statistics of submitted jobs on a supercomputer can help us understand how users from various scientific domains use HPC platforms and better design a job scheduler. We explore to generate insight regarding workload distribution and usage pattern domains from job scheduler trace, GPU failure information, and project-specific information collected from Titan supercomputer. Furthermore, we want to know how the scheduler performance varies over time and how the users' scheduling behavior changes following a system failure. These observations have the potential to provide valuable insight, which is helpful to prepare for system failures. These practices will help us develop and apply novel machine learning algorithms in understanding system behavior, requirement, and better scheduling of HPC systems. There are two datasets, RUR and GPU. RUR: This dataset is the job scheduler traces collected from the Titan supercomputerfrom 01/01/2015 to 07/31/2019 (2015.csv - 2019.csv). These were collected usingResource Utilization Report (RUR), a Cray-developed resource-usage data collectionand reporting system. It contains the usage information of its critical resources (CPU,Memory, GPU, and I/O) of each running job on Titan during that period [2]. ProjectAreas: Every job is associated with a project ID. TheProjectAreas.csvdatasetprovides a mapping of the project ID to its domain science. GPU: There have been some hardware-related issues in the GPUs in Titan that caused some GPUs to fail, sometimes irrecoverably during some job runs. This dataset provides information regarding these failures during the execution of the submitted jobs. GPUs on Titan are uniquely identified by a serial number (SN), and they are installed in a location. A GPU can be installed in a location, then removed from that location following a failure, and then re-installed in a different location after fixing the problem. If the failure can't be recovered, the GPU might be removed entirely from Titan. There are two prominent types of failures that resulted in the removal of GPUs from Titan: Double Bit Error (DBE) and Out of the Bus (OTB). The dataset (gc_full.csv) has the following fields: 1. SN : Serial number of a GPU 2. location : The location where it is installed 3. insert : The time when it was inserted into that location 4. remove : The time when it was removed from that location 5. duration : Amount of time the GPU spent in this location 6. out : If the device was taken out entirely w/o a re-installment into a new location. 7. event : If the GPU was taken out entirely, the reason for its removal. To learn more about this dataset, please refer to the git repositoryhttps://github.com/olcf/TitanGPULifeand the related publication [1]. References [1] George Ostrouchov, Don Maxwell, Rizwan A Ashraf, Christian Engelmann, MallikarjunShankar, and James H Rogers. Gpu lifetimes on titan supercomputer: Survival analysisand reliability. InSC20: International Conference for High Performance Computing,Networking, Storage and Analysis, pages 1-14. IEEE, 2020. [2] Feiyi Wang, Sarp Oral, Satyabrata Sen, and Neena Imam. Learning from five-yearresource-utilization data of titan system. In2019 IEEE International Conference onCluster Computing (CLUSTER), pages 1-6. IEEE, 2019.

42 ENGINEERING↗
DOE OSTI2018

Situ/FASGuard: Combining Anomaly Detection with Signature Generation

Despite the best efforts of cyber security analysts, networked computing assets are regularly compromised, resulting in the loss of intellectual property, the disclosure of state secrets, and financial damages in the billions. A 2014 report from the Center for Strategic and International Studies estimated the global cost of cyber crime at $\$$400 billion annually. There has also been a rise of sophisticated attack groups that continually develop novel methods of penetrating networks that current technologies are typically unable to detect.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2021

Deterministic multi-qubit entanglement in a quantum network

High-fidelity deterministic quantum state transfer and multi-qubit entanglement are demonstrated in a quantum network comprising two superconducting quantum nodes one metre apart, with each node including three interconnected qubits. The generation of high-fidelity distributed multi-qubit entanglement is a challenging task for large-scale quantum communication and computational networks. The deterministic entanglement of two remote qubits has recently been demonstrated with both photons and phonons. However, the deterministic generation and transmission of multi-qubit entanglement has not been demonstrated, primarily owing to limited state-transfer fidelities. Here we report a quantum network comprising two superconducting quantum nodes connected by a one-metre-long superconducting coaxial cable, where each node includes three interconnected qubits. By directly connecting the cable to one qubit in each node, we transfer quantum states between the nodes with a process fidelity of 0.911 +/- 0.008. We also prepare a three-qubit Greenberger-Horne-Zeilinger (GHZ) state in one node and deterministically transfer this state to the other node, with a transferred-state fidelity of 0.656 +/- 0.014. We further use this system to deterministically generate a globally distributed two-node, six-qubit GHZ state with a state fidelity of 0.722 +/- 0.021. In this work, the GHZ state fidelities are clearly above the threshold of 1/2 for genuine multipartite entanglement, showing that this architecture can be used to coherently link together multiple superconducting quantum processors, providing a modular approach for building large-scale quantum computers.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2014

Summary of LANL's Preliminary Evaluation of SWORD for FY14

This document summarizes LANL’s preliminary evaluation of the SWORD (SoftWare for Optimization of Radiation Detectors) software package for use by LANL for search scenario simulations. Project LANL12-RS-039J requires Los Alamos National Laboratory (LANL) to evaluate the SWORD software program utilized by Oak Ridge National Laboratory (ORNL) for DHS activities for use as a search scenario simulator for Emergency Response (ER) activities at LANL. Our evaluation addresses the ability of LANL to install the SWORD software on LANL computing networks and the ability of the device modeler skill set use the code during ER operations.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2016

Exploring Hydrogenotrophic Methanogenesis: a Genome Scale Metabolic Reconstruction of Methanococcus maripaludis

ABSTRACT Hydrogenotrophic methanogenesis occurs in multiple environments, ranging from the intestinal tracts of animals to anaerobic sediments and hot springs. Energy conservation in hydrogenotrophic methanogens was long a mystery; only within the last decade was it reported that net energy conservation for growth depends on electron bifurcation. In this work, we focus on Methanococcus maripaludis , a well-studied hydrogenotrophic marine methanogen. To better understand hydrogenotrophic methanogenesis and compare it with methylotrophic methanogenesis that utilizes oxidative phosphorylation rather than electron bifurcation, we have built iMR539, a genome scale metabolic reconstruction that accounts for 539 of the 1,722 protein-coding genes of M. maripaludis strain S2. Our reconstructed metabolic network uses recent literature to not only represent the central electron bifurcation reaction but also incorporate vital biosynthesis and assimilation pathways, including unique cofactor and coenzyme syntheses. We show that our model accurately predicts experimental growth and gene knockout data, with 93% accuracy and a Matthews correlation coefficient of 0.78. Furthermore, we use our metabolic network reconstruction to probe the implications of electron bifurcation by showing its essentiality, as well as investigating the infeasibility of aceticlastic methanogenesis in the network. Additionally, we demonstrate a method of applying thermodynamic constraints to a metabolic model to quickly estimate overall free-energy changes between what comes in and out of the cell. Finally, we describe a novel reconstruction-specific computational toolbox we created to improve usability. Together, our results provide a computational network for exploring hydrogenotrophic methanogenesis and confirm the importance of electron bifurcation in this process. IMPORTANCE Understanding and applying hydrogenotrophic methanogenesis is a promising avenue for developing new bioenergy technologies around methane gas. Although a significant portion of biological methane is generated through this environmentally ubiquitous pathway, existing methanogen models portray the more traditional energy conservation mechanisms that are found in other methanogens. We have constructed a genome scale metabolic network of Methanococcus maripaludis that explicitly accounts for all major reactions involved in hydrogenotrophic methanogenesis. Our reconstruction demonstrates the importance of electron bifurcation in central metabolism, providing both a window into hydrogenotrophic methanogenesis and a hypothesis-generating platform to fuel metabolic engineering efforts.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2018

A Scalable HPC Insider Threat Monitoring System

Cyber Equations, Inc. is reporting on the results of its DOE SBIR Phase I project for the development of a Scalable HPC Insider Threat Monitoring System. This final report to the Department of Energy for Task DE-FOA-0001618 covers the period from 02/21/2017 to 02/20/2018 and summarizes the larger research accomplishments, which can be divided in theoretical and laboratory experiments. One of the many challenges for the U.S. Department of Energy (DOE) is the support of the high-performance computing (HPC) centers while providing quality information services, strategic vision, leadership, technical expertise, and capabilities necessary to enable the DOE to deliver effective, efficient, economical, and secure HPC services. In order to realize a secure DOE laboratory enterprise, DOE facilities operations must counter a wide range of cyber insider threats, from unsophisticated adversaries up to advanced, nation state sponsored actors. The DOE laboratories also presents an enormous insider attack surface of an ever-growing number of computers, networks, and devices all running a myriad of software. In addition, the DOE laboratories are connected to a variety of external organizations which multiplies the possibility of insider threat. During this SBIR project Cyber Equations developed a strategic combination of supervised and unsupervised machine learning techniques to control scale and classify whether entities, such as hosts, actors, or documents, are showing suspicious insider behavior. We conducted experiments using real cyber data to show that changes in observable behavior (e.g., changes in outbound traffic patterns) are indicative of attacks executing (e.g., insiders exfiltrating data, bots calling home, or an attack spreading). The features and methods we use, have been used in the anomaly detection research and development community for a significant amount of time and robust implementations are openly available. K-Means clustering, Decision Trees, and Support Vector Machine based classifiers are readily available through the R language and open source H20 machine learning framework. The Cyber Equations approach is novel in its use of these classifiers combined with Hadoop based parallel processing technology. The five stages of processing used by CyberInsider improve scalability and reduce the high number of false positives normally associated with network anomaly detection. In summary, the Cyber Equations has successfully accomplished all of its Phase I tasks and demonstrated the feasibility of the Insider Threat Monitoring System.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2021

TBAA20: Task-Based Algorithms and Applications

The new challenges posed by Exascale system architectures have resulted in difficulty achieving a desired scalability using traditional distributed ­memory runtimes. Task­-based programming models show promise in addressing these challenges, providing application developers with a productive and performant approach to programming on next generation systems. Empirical studies show that task-based models can overcome load ­balancing issues that are inherent to traditional distributed ­memory runtimes, and that task-­based runtimes perform comparably to those systems when balanced. This panel is designed to explore the advantages of task-­based programming models on modern and future HPC systems from an industry, university, and national lab perspective. It aims at gathering application experts and proponents of these models to present concrete and practical examples of using task­-based runtimes to overcome the challenges posed by Exascale system architectures. This report describes the objectives, activities, and outcomes of the panel TBAA: Task­-Based Algorithms and Applications which was held at the International Conference for High Performance Computing, Networking, Storage, and Analysis (SC 20) on November 18, 2020.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2020

Phosphoproteome Response to Dithiothreitol Reveals Unique Versus Shared Features of Saccharomyces cerevisiae Stress Responses

To cope with sudden changes in the external environment, the budding yeast Saccharomyces cerevisiae orchestrates a multifaceted response that spans many levels of physiology. Several studies have interrogated the transcriptome response to endoplasmic reticulum (ER) stress and the role of regulators such as the Ire1 kinase and Hac1 transcription factors. However, less is known about responses to ER stress at other levels of physiology. Here, we used quantitative phosphoproteomics and computational network inference to uncover the yeast phosphoproteome response to the reducing agent dithiothreitol (DTT) and the upstream signaling network that controls it. We profiled wild-type cells and mutants lacking IRE1 or MAPK kinases MKK1 and MKK2, before and at various times after DTT treatment. In addition to revealing downstream targets of these kinases, our inference approach predicted new regulators in the DTT response, including cell-cycle regulator Cdc28 and osmotic-response kinase Rck2, which we validated computationally. Our results also revealed similarities and surprising differences in responses to different stress conditions, especially in the response of protein kinase A targets. Furthermore, these results have implications for the breadth of signaling programs that can give rise to common stress response signatures.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2018

All-Solid-State Synaptic Transistor with Ultralow Conductance for Neuromorphic Computing

Electronic synaptic devices are important building blocks for neuromorphic computational systems that can go beyond the constraints of von Neumann architecture. Although two-terminal memristive devices are demonstrated to be possible candidates, they suffer from several shortcomings related to the filament formation mechanism including nonlinear switching, write noise, and high device conductance, all of which limit the accuracy and energy efficiency. Electrochemical three-terminal transistors, in which the channel conductance can be tuned without filament formation provide an alternative platform for synaptic electronics. In this work, an all-solid-state electrochemical transistor made with Li ion–based solid dielectric and 2D α-phase molybdenum oxide (α-MoO 3 ) nanosheets as the channel is demonstrated. These devices achieve nonvolatile conductance modulation in an ultralow conductance regime (<75 nS) by reversible intercalation of Li ions into the α-MoO 3 lattice. Based on this operating mechanism, the essential functionalities of synapses, such as short- and long-term synaptic plasticity and bidirectional near-linear analog weight update are demonstrated. Simulations using the handwritten digit data sets demonstrate high recognition accuracy (94.1%) of the synaptic transistor arrays. These results provide an insight into the application of 2D oxides for large-scale, energy-efficient neuromorphic computing networks.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
DOE OSTI2017

NERSC & JGI Seek Elusive Proteins for Gene Editing

A video just released by the Supercomputing 2017 (SC17) conference shows how biologists at UC Berkeley and the Joint Genome Institute (JGI) – a Department of Energy Office of Science User Facility – are using NERSC, the Office of Science’s primary supercomputing center, to identify a class of enzymes capable of editing out genes responsible for disease. This revolutionary work requires petaflops of computing power to sift through billions of DNA sequences in the JGI data portals to identify proteins like Cas9 that, combined with the Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR), can “edit” a genome. First discovered by researchers at UC Berkeley, the CRISPR-Cas9 system has the power to permanently correct disease-causing mutations in cells, animal models, and eventually human patients to cure certain types of cancer, cardiovascular disease, sickle cell disease, and retinal degeneration. Since the CRISPR system was first identified in the early 2000s, it has become the most promising technology for treating genetic disease in humans and enabling plants to survive stress caused by pests and the environment. The annual SC17 conference will take place November 12-17 in Denver, Colorado. The over 12,000 attendees from academia, government and industry are leaders in researching and delivering high performance computing, networking, data storage and analysis in support of scientific discovery. http://sc17.supercomputing.org Producer: Jennifer Boyd, Boyd Productions DP: Damon Hennessey Audio: Richard K. Pooler Score: Michael Bacon Music

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

Quantum Networks for High Energy Physics

Quantum networks of quantum objects promise to be exponentially more powerful than the objects considered independently. To live up to this promise will require the development of error mitigation and correction strategies to preserve quantum information as it is initialized, stored, transported, utilized, and measured. The quantum information could be encoded in discrete variables such as qubits, in continuous variables, or anything in-between. Quantum computational networks promise to enable simulation of physical phenomena of interest to the HEP community. Quantum sensor networks promise new measurement capability to test for new physics and improve upon existing measurements of fundamental constants. Such networks could exist at multiple scales from the nano-scale to a global-scale quantum network.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2024

De novo design of pH-responsive self-assembling helical protein filaments

Abstract Biological evolution has led to precise and dynamic nanostructures that reconfigure in response to pH and other environmental conditions. However, designing micrometre-scale protein nanostructures that are environmentally responsive remains a challenge. Here we describe the de novo design of pH-responsive protein filaments built from subunits containing six or nine buried histidine residues that assemble into micrometre-scale, well-ordered fibres at neutral pH. The cryogenic electron microscopy structure of an optimized design is nearly identical to the computational design model for both the subunit internal geometry and the subunit packing into the fibre. Electron, fluorescent and atomic force microscopy characterization reveal a sharp and reversible transition from assembled to disassembled fibres over 0.3 pH units, and rapid fibre disassembly in less than 1 s following a drop in pH. The midpoint of the transition can be tuned by modulating buried histidine-containing hydrogen bond networks. Computational protein design thus provides a route to creating unbound nanomaterials that rapidly respond to small pH changes.

77 NANOSCIENCE AND NANOTECHNOLOGY↗