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At least 163 records · Page 9

Preliminary Comparisons of the Information Content and Utility of TM Versus MSS Data

Some preliminary indications were provided as to the relative merits of actual TM data versus MSS data for land cover mapping related applications. Three analyses were designed which had sensitivity to the differences in spectral, spatial and radiometric parameters between the TM and MSS. In the water body analysis, a primarily spatially related test, the detectability of small uniform targets was examined. The principal components analysis, an examination of the inherent dimensionality of the data, was more spectrally and radiometrically related. The spectral clustering analysis, also heavily spectrally and radiometrically influenced, provided information on the types of targets separable on TM versus MSS data. These analyses were to be conducted with simultaneously collected LANDSAT-4 complete TM (7 band) and MSS (4 band) data. In actuality, 4-band TM data, and archived LANDSAT-2 MSS data of the same area were used.

Markham, B. L.↗

Determining the Number of Clusters in a Data Set Without Graphical Interpretation

Cluster analysis is a data mining technique that is meant ot simplify the process of classifying data points. The basic clustering process requires an input of data points and the number of clusters wanted. The clustering algorithm will then pick starting C points for the clusters, which can be either random spatial points or random data points. It then assigns each data point to the nearest C point where "nearest usually means Euclidean distance, but some algorithms use another criterion. The next step is determining whether the clustering arrangement this found is within a certain tolerance. If it falls within this tolerance, the process ends. Otherwise the C points are adjusted based on how many data points are in each cluster, and the steps repeat until the algorithm converges,

Aguirre, Nathan S.↗

The 3D clustering of Lyman Alpha Emitters measured with DESI

We present a clustering analysis of Lyman-$α$ emitters (LAEs) using spectroscopic observations from the Dark Energy Spectroscopic Instrument (DESI) of candidates selected from the Blanco/DECam Intermediate-Band Imaging Survey (IBIS). We measure the two-point correlation function and the power spectrum, including cross-correlations with DESI quasars. Using both analytical and halo occupation distribution (HOD) simulation-based modeling, we find a linear bias of $b \sim 2.31$--$2.62$ for LAEs over the redshift range $2.26 < z < 3.41$. The analytical modeling also provides constraints on the strength of radiative transfer effects, while the HOD analysis characterizes the LAE-halo connection across multiple models. Finally, we quantify the magnitude of non-perturbative clustering effects such as Fingers of God in the LAE population, providing essential input for the accurate modeling of LAE-based cosmological analyses in forthcoming high-redshift surveys such as DESI-II.

Ebina, H. [UC, Berkeley; LBL, Berkeley] (ORCID:000↗

Processes and subdivisions in diogenites, a multivariate statistical analysis

Multivariate statistical techniques used on diogenite orthopyroxene analyses show the relationships that occur within diogenites and the two orthopyroxenite components (class I and II) in the polymict diogenite Garland. Cluster analysis shows that only Peckelsheim is similar to Garland class I (Fe-rich) and the other diogenites resemble Garland class II. The unique diogenite Y 75032 may be related to type I by fractionation. Factor analysis confirms the subdivision and shows that Fe does not correlate with the weakly incompatible elements across the entire pyroxene composition range, indicating that igneous fractionation is not the process controlling total diogenite composition variation. The occurrence of two groups of diogenites is interpreted as the result of sampling or mixing of two main sequences of orthopyroxene cumulates with slightly different compositions.

Harriott, T. A.↗

Sensor fusion techniques for predicting thunderstorm evolution using lightning and radar networks

A pattern recognition scheme that is used to generate initial seeds or 'first guess' fields for clustering the discrete lightning discharges into storm cells is presented. The clustering process is critically dependent on the prior accuracy of the lightning location estimates. The generation of subsequent storm life-cycle time series (for extrapolation forecasting) also relies on the cluster analysis procedure assigning the correct number of lightning discharges (objects) to the proper storms (groups). The advantages and limitations of different clustering strategies for storm identification and tracking are examined. Storm identification with lightning data alone is compared to storm identification with radar alone, and some synergies for sensor fusion are explored.

Goodman, Steven J.↗

Characteristic archaebacterial 16S rRNA oligonucleotides

A method of analyzing 16S rRNA catalog data has been developed in which groupings at various taxonomic levels can be characterized in terms of specific "signature" oligonucleotides. This approach provides an alternative means for evaluating higher order branching possibilities and can be used to assess the phylogenetic position of isolates that are poorly placed by the usual clustering procedures. This signature approach has been applied to forty archaebacterial catalogs and every oligonucleotide with significant signature value has been identified. Sets of specific oligonucleotides were identified for every major group on a dendrogram produced by cluster analysis procedures. Signatures that would establish between group relationships were also sought and found. In the case of the Methanobacteriaceae the clustering methods suggest a specific relationship to the Methanococcaceae. This inclusion is in fact supported by six strong signature oligonucleotides. However there are also significant numbers of signature oligonucleotides supporting a specific relationship of the Methanobacteriaceae to either the Halobacteriaceae or the Methanomicrobiaceae. Thus the placement of the Methanobacteriaceae is less certain than the usual dendrograms imply. The signature approach also was used to assess the phylogenetic position of Thermoplasma acidophilum which is found to be more closely related to the methanogen/halophile Division than to the sulfur dependent Division of the archaebacteria. This does not imply however that Thermoplasma acidophilum is properly regarded as being in the methanogen/halophile Division.

NASA Discipline Exobiology↗

Fossil Signatures Using Elemental Abundance Distributions and Bayesian Probabilistic Classification

Elemental abundances (C6, N7, O8, Na11, Mg12, Al3, P15, S16, Cl17, K19, Ca20, Ti22, Mn25, Fe26, and Ni28) were obtained for a set of terrestrial fossils and the rock matrix surrounding them. Principal Component Analysis extracted five factors accounting for the 92.5% of the data variance, i.e. information content, of the elemental abundance data. Hierarchical Cluster Analysis provided unsupervised sample classification distinguishing fossil from matrix samples on the basis of either raw abundances or PCA input that agreed strongly with visual classification. A stochastic, non-linear Artificial Neural Network produced a Bayesian probability of correct sample classification. The results provide a quantitative probabilistic methodology for discriminating terrestrial fossils from the surrounding rock matrix using chemical information. To demonstrate the applicability of these techniques to the assessment of meteoritic samples or in situ extraterrestrial exploration, we present preliminary data on samples of the Orgueil meteorite. In both systems an elemental signature produces target classification decisions remarkably consistent with morphological classification by a human expert using only structural (visual) information. We discuss the possibility of implementing a complexity analysis metric capable of automating certain image analysis and pattern recognition abilities of the human eye using low magnification optical microscopy images and discuss the extension of this technique across multiple scales.

Hoover, Richard B.↗

The importance of accounting for landscape position when investigating grasslands: A multidisciplinary characterisation of a Californian coastal grassland

Data from the characterisation of the Point Reyes Field Site, published in AGU Earth's Future under the title: The importance of accounting for landscape position when investigating grasslands: A multidisciplinary characterisation of a Californian coastal grassland. This paper explored the effect of landscape position on the response of a Californian grassland to seasonal changes. All files are csv files. The EMI data contains 8 csv files with a metadata csv explaining the columns. The dataset also includes soil variables including total concentrations calculated from fused samples, then dissolved and measured on ICP-AES for whole-rock elements and ICP-MS for trace elements. Mineral composition was attained using X-ray diffraction at BL 11-3 at SSRL . Data was then run through the High Score database to characterise different mineral phases. total It also includes a table with bulk soil characteristics such as soil pH, cation exchange capacity, and soil textural data. Data from Teros 12 Meter soil moisture, electrical conductivity and temperature sensors are presented in SMS Csv file. While the WL bottom and top files contain data from Piezometers measuring the ground water table. We have included a csv file that contains soil CO2 efflux data from Feb 2021-Oct 2021 in the Point Reyes Grassland Experiment We have included the spatially orientated (easting northing) remotely sensed datasets that were used in the K-means clustering analysis conducted on our site with electrical conductivity, normalised difference vegetation index, elevation, slope, solar radiation, topographic position and wetness index, and a clustering score. Finally there is a list of all the identified grassland species at the site.For more information on flux data, please contact the corresponding author.

54 ENVIRONMENTAL SCIENCES↗

NCUBE - A clustering algorithm based on a discretized data space

Cluster analysis involves the unsupervised grouping of data. The process provides an automatic procedure for generating known training samples for pattern classification. NCUBE, the clustering algorithm presented, is based upon the concept of imposing a gridwork on the data space. The NCUBE computer implementation of this concept provides an easily derived form of piecewise linear discrimination. This piecewise linear discrimination permits the separation of some types of data groups that are not linearly separable.

Eigen, D. J.↗

Evaluation of genetic diversity, agronomic traits, and anthracnose resistance in the NPGS Sudan Sorghum Core collection

The United States Department of Agriculture (USDA) National Plant Germplasm System (NPGS) sorghum core collection contains 3011 accessions randomly selected from 77 countries. Genomic and phenotypic characterization of this core collection is necessary to encourage and facilitate its utilization in breeding programs and to improve conservation efforts. In this study, we examined the genome sequences of 318 accessions belonging to the NPGS Sudan sorghum core set, and characterized their agronomic traits and anthracnose resistance response. We identified 183,144 single nucleotide polymorphisms (SNPs) located within or in proximity of 25,124 annotated genes using the genotyping-by-sequencing (GBS) approach. The core collection was genetically highly diverse, with an average pairwise genetic distance of 0.76 among accessions. Population structure and cluster analysis revealed five ancestral populations within the Sudan core set, with moderate to high level of genetic differentiation. In total, 171 accessions (54%) were assigned to one of these populations, which covered 96% of the total genomic variation. Genome scan based on Tajima’s D values revealed two populations under balancing selection. Phenotypic analysis showed differences in agronomic traits among the populations, suggesting that these populations belong to different ecogeographical regions. A total of 55 accessions were resistant to anthracnose; these accessions could represent multiple resistance sources. Genome-wide association study based on fixed and random model Circulating Probability (farmCPU) identified genomic regions associated with plant height, flowering time, panicle length and diameter, and anthracnose resistance response. Integrated analysis of the Sudan core set and sorghum association panel indicated that a large portion of the genetic variation in the Sudan core set might be present in breeding programs but remains unexploited within some clusters of accessions. The NPGS Sudan core collection comprises genetically and phenotypically diverse germplasm with multiple anthracnose resistance sources. Population genomic analysis could be used to improve screening efforts and identify the most valuable germplasm for breeding programs. The new GBS data set generated in this study represents a novel genomic resource for plant breeders interested in mining the genetic diversity of the NPGS sorghum collection.

59 BASIC BIOLOGICAL SCIENCES↗

Variations in chemical composition of Apollo 15 mare basalts

Chemical analyses of 30 different Apollo 15 mare basalts were examined to evaluate the effects of closure on the pearson moment correlation coefficient. It is shown possible to describe the Apollo 15 mare basalts in terms of an opaque, an olivine/pyroxene, an anorthite, and a KREEP component, if significant correlations are identified using the expected correlations as null values. Using Q-mode cluster analysis and nonlinear mapping, it is possible to recognize three groups of the mare basalts, groups 1 and 2 belonging to the olivine normative basalt cluster and group 3 to the quartz normative cluster.

Butler, J. C.↗

Temperature and iron abundance variation of the gas in the Perseus cluster

We present the first two-dimensional map of the temperature and iron abundance in the Perseus cluster. Analysis of spectra obtained using the Gas Imaging Spectrometer on ASCA shows nonaxisymmetric variations in both the temperature and iron abundance. Traveling west from the cluster center, the temperature increases to 9 keV at 20 min and then decreases rapidly to 5 keV at 40 min. There is a hot (greater than 10 keV) region to the northwest of the cluster center. The abundance is approximately constant over much of the surveyed region, but there is evidence for an increased abundance in the northwest hot area and a gradual decrease in a westerly direction.

Arnaud, K. A.↗

Chemical properties and single-particle mixing state of soot aerosol in Houston during the TRACER campaign

Abstract. A high-resolution soot particle aerosol mass spectrometer (SP-AMS) was used to selectively measure refractory black carbon (rBC) and its associated coating material using both the ensemble size-resolved mass spectral mode and the event trigger single particle (ETSP) mode in Houston, Texas, in summer 2022. This study was conducted as part of the Department of Energy Atmospheric Radiation Measurement (ARM) program's TRacking Aerosol Convection interactions ExpeRiment (TRACER) field campaign. The study revealed an average (±1σ) rBC concentration of 103 ± 176 ng m−3. Additionally, the coatings on the BC particles were primarily composed of organics (59 %; 219 ± 260 ng m−3) and sulfate (26 %; 94 ± 55 ng m−3). Positive matrix factorization (PMF) analysis of the ensemble mass spectra of BC-containing particles resolved four distinct types of soot aerosol, including an oxidized organic aerosol (OOABC,PMF) factor associated with processed primary organic aerosol, an inorganic sulfate factor (SO4,BC,PMF), an oxidized rBC factor (O-BCPMF), and a mixed mineral dust–biomass burning aerosol factor with significant contribution from potassium (K-BBBC,PMF). Additionally, K-means clustering analysis of the single-particle mass spectra identified eight different clusters, including soot particles enriched in hydrocarbon-like organic aerosol (HOABC,ETSP), sulfate (SO4,BC,ETSP), two types of rBC, OOA (OOABC,ETSP), chloride (ClBC,ETSP), and nitrate (NO3,BC,ETSP). The single-particle measurements demonstrate substantial variation in BC coating thickness with coating-to-rBC mass ratios ranging from 0.1 to 100. The mixing state index (χ), which denotes the degree of homogeneity of the soot aerosol, varied from 4 % to 94 % with a median of 40 %, indicating that the aerosol population lies in between internal and external mixing but has large temporal and source type variability. In addition, a significant fraction of BC-containing particles, a majority enriched with oxidized organics and sulfate, exhibit sufficiently high κ values and diameters conducive to activation as cloud nuclei under atmospherically relevant supersaturation conditions. This finding bears significance in comprehending the aging processes of rBC-containing particles and their activation into cloud droplets. Our analysis highlights the complex nature of soot aerosol and underscores the need to comprehend its variability across different environments for accurate assessment of climate change.

54 ENVIRONMENTAL SCIENCES↗

Cloud Regimes as a Tool for Systematic Study of Various Aerosol-Cloud-Precipitation Interactions

Systematic changes of clouds and precipitation are notoriously difficult to ascribe to aerosols. This presentation will showcase yet one more attempt to at least credibly detect the signal of aerosol-cloud-precipitation interactions. We surmise that the concept of cloud regimes (CRs) is appropriate to conduct such an investigation. Previous studies focused on what we call here dynamical CRs, and while we continue to adopt those too for our analysis, we have found that a different way of organizing cloud systems, namely via microphysical regimes is also promising. Our analysis relies on MODIS Collection 6 Level-3 data for clouds and aerosols, and TRMM-TMPA data for precipitation. The regimes are derived by applying clustering analysis on MODIS joint histograms, and once each grid cell is assigned a regime, aerosol and precipitation data can be spatiotemporally matched and composited by regime. The composites of various cloud and precipitation variables for high (upper quartile of distribution) and low (lower quartile) aerosol loadings can then be contrasted. We seek evidence of aerosol effects both in regimes with large fractions of deep ice-rich clouds, as well as regimes where low liquid phase clouds dominate. Signals can be seen, especially when the analysis is broken by land-ocean and when additional filters are applied, but there are of course caveats which will be discussed.

cloud regimes↗

Spectral characteristics and the extent of paleosols of the Palouse formation

Spectral relationships were investigated for several bare soil fields which were in summer fallow rotation on the date of the imagery. Printouts of each band were examined and compared to aerial photography. Bands with dissimilar reflectance patterns for known areas were then combined using ratio techniques which were proven useful in other studies (Williams, 1983). Selected ratios were Thematic Mapper (TM) 1/TM4, TM3/TM4, and TM5/TM4. Cluster analyses and Baysian and Fastclass classifier images were produced using the three ratio images. Plots of cluster analysis outputs revealed distinct groupings of reflectance data representing green crops, ripened crops, soil and green plants, and bare soil. Bare soil was represented by a line of clusters on plots of the ratios TM5/TM4 and TM3/TM4. The soil line was investigated further to determine factors involved in the distributin of clusters alone the line. The clusters representing the bare soil line were also studied by plotting the Tm5/TM4, TM1/TM4 dimension. A total of 76 soil samples were gathered and analyzed for organic carbon.

Frazier, B. E.↗

A generalizable machine learning-assisted fast Fourier transform algorithm to simulate the large strain phenomena in polycrystalline materials

Machine learning methods have shown initial promise in constitutive modeling for single crystals or homogenized polycrystals, delivering notable computational efficiency. However, existing machine learning-based constitutive models often lack generalizability, limiting their application across diverse boundary value problems. This study introduces a thermodynamics-informed artificial neural network model to accelerate rate-tangent crystal plasticity fast Fourier transform simulations for cross-scale deformation behaviors of polycrystals under complex loading. Our model integrates microstructural variability and local interactions effectively. To address local effects in each grain, we employ K-means clustering to group Gauss points within the microstructure into clusters assumed to be in similar mechanical states. This approach, based on self-clustering analysis, extends model scope from macroscopic stress response to the granular level, capturing mechanical responses and orientation evolution across grains. This reduces the number of nonlinear problems to solve, with cluster responses propagated throughout each group. The thermodynamics-based artificial neural network-extracted features are further processed using local material state clusters to account for history-dependent deformation and evolving microstructures. Additionally, representative volume element simulations with rate-tangent crystal plasticity fast Fourier transform provide reliable datasets for model training. The proposed model demonstrates high efficiency, accuracy, self-consistency, and enhanced generalizability in predicting strain–stress responses and orientation evolution at both individual grain and aggregate scales under complex loading conditions, such as biaxial tension and arbitrary loading scenarios.

36 MATERIALS SCIENCE↗

Galaxy Cluster Contribution to the Diffuse Extragalactic Ultraviolet Background

The diffuse ultraviolet background radiation has been mapped over most of the sky with 2′ resolution using data from the Galaxy Evolution Explorer survey. We utilize this map to study the correlation between the UV background and clusters of galaxies discovered via the Sunyaev–Zeldovich effect in the Planck survey. We use only high Galactic latitude (|b|>60{sup ∘}) galaxy clusters to avoid contamination by Galactic foregrounds, and we only analyze clusters with a measured redshift. This leaves us with a sample of 142 clusters over the redshift range of 0.02 ≤ z ≤ 0.72, which we further subdivide into four redshift bins. In analyzing our stacked samples binned by redshift, we find evidence for a central excess of UV background light compared to local backgrounds for clusters with z < 0.3. We then stacked these z < 0.3 clusters to find a statistically significant excess of 12 ± 2.3 photon cm{sup −2} s{sup −1} sr{sup −1} Å{sup −1} over the median of ∼380 photon cm{sup −2} s{sup −1} sr{sup −1} Å{sup −1} measured around random blank fields. We measure the stacked radial profile of these clusters, and find that the excess UV radiation decays to the level of the background at a radius of ∼1 Mpc, roughly consistent with the maximum radial extent of the clusters. Analysis of possible physical processes contributing to the excess UV brightness indicates that non-thermal emission from relativistic electrons in the intracluster medium and faint, unresolved UV emission from cluster member galaxies and intracluster light are likely the dominant contributors.

79 ASTRONOMY AND ASTROPHYSICS↗

Regional and Model-Specific Response Types in A Global Gridded Crop Model Ensemble

Crop models are often employed to project crop yields under changing conditions such as global warming and associated management change for adaptation. Multi-model ensembles are promoted to enhance the robustness of projections, but questions remain on what causes often large differences between projections of individual models. Global Gridded Crop Models (GGCMs) are especially exposed to this question when applied for assessing climate change impacts, adaptation, environmental impacts of agricultural production, because their results are used in downstream analyses, such as in integrated assessment or economic modeling for projecting future land-use change. Even though global gridded crop models are often based on detailed field-scale models or have implemented similar modeling principles in other ecosystem models, global-scale models are subject to substantial uncertainties from both model structure and parametrization as well as from calibration and input data quality. AgMIP’s Global Gridded Crop Model Intercomparison (GGCMI) has thus set out to intercompare GGCMs in order to evaluate model performance, describe model uncertainties, identify inconsistencies within the ensemble and underlying reasons, and to ultimately improve models and modeling capacities. In phase 2 of the GGCMI activities, 12 modeling groups followed a modeling protocol that asked for up to 1404 31-year global simulations at 0.5 arc-degree spatial resolution to assess models’ sensitivities to changes in carbon dioxide (C; 4 different levels) temperature (T; 7 different offset levels), water supply (W; 9 levels), and nitrogen (N; 3 levels), the so-called CTWN experiment (Franke et al. 2020; http://dx.doi.org/10.5194/gmd-13-2315-2020). We here present analyses of model response types using impact response surfaces along the C, T, W, and N dimensions, respectively and collectively. Doing so, we can understand differences in simulated responses per driver rather than aggregated changes in yields. We find that models’ sensitivities to the individual driver dimensions are substantially different and often more different across models than across regions. A cluster analysis finds regional and model-specific patterns. There is some agreement across models with respect to the spatial patterns of response types but strong differences in the distribution of response type clusters across models suggests that models need to undergo further scrutiny. We suggest establishing standards in model process evaluation not only against historical dynamics but also against dedicated experiments across the CTWN dimensions.

crop models↗