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At least 163 records · Page 9

Ion-Ice Astrochemistry: Barrierless Low-Energy Deposition Pathways to HCOOH, CH3OH, and CO2 on Icy Grain Mantles from Precursor Cations

A new family of very favorable reaction pathways is explored involving the deposition of ions on icy grain mantles with very low energies. Quantum chemical cluster calculations at the MP2/6-31+G** level in 4H2O clusters and at the B3LYP/6-31+G** level in 17H2O clusters indicate that HCO+ and CH3 + are able to react spontaneously with one of the water molecules in the cluster to form protonated formic acid (HCOOH2 +) and protonated methanol (CH3OH2 +), respectively. It is furthermore found that these initial adducts spontaneously transfer their excess protons to the cluster to form neutral formic acid and methanol, plus solvated hydronium, H3O+. In the final case, if a CO molecule is bound to the surface of the cluster, OH+ may react with it to form protonated carbon dioxide (HCO2 +), which then loses its proton to yield CO2 and H3O+. In the present model, all of these processes were found to occur with no barriers. Discussion includes the analogous gas phase processes, which have been considered in previous studies, as well as the competitive abstraction pathway for HCO(+) + H2O.

Woon, David E.↗

In Vitro Experimental Model to Investigate the Biological Effects across the Bragg Curve of High-LET Radiation

The space environment consists of a varying field of radiation particles including high energy ions, with a spacecrafts shielding material providing the only major protection to astronauts from harmful exposure. Unlike lowLET gamma or Xrays, the presence of shielding does not always reduce the radiation risks for energetic charged particle exposure since the dose delivered by the charged particle increases sharply as the particle approaches the end of its range, a position known as the Bragg peak and the correlating spatial dose distribution identified as the Bragg curve. The Bragg curve does not necessarily represent the biological damage along the particle traversal since biological effects are influenced by the track structure of both primary and secondary particles. Therefore, the biological Bragg curve is dependent of the energy and the type of the primary particle, and may vary for different biological endpoints. Here we describe a unique irradiation geometry and experimental system to measure the biological response across the Bragg curve in one consistent biological sample. Polyethylene shielding was used to achieve a Bragg curve distribution with the beam geometry parallel to a monolayer of fibroblast cells. We present data that highlights the differential formation of DNA double strand breaks (DSBs) and chromosomal deletions across the Bragg curve in human fibroblasts irradiated with 600 MeV/nucleon iron ion beams. Qualitative analyses of gammaH2AX fluorescence, a known marker of DSBs, indicated potentially increased clustering of DNA damage before the Bragg peak, enhanced homogenous distribution at the peak, and provided visual evidence of high linear energy transfer (LET) particle traversal of cells beyond the Bragg peak in agreement with one-dimensional transport approximations. A biological response curve generated for micronuclei induction across the Bragg curve for 600 MeV/n Fe ions did not reveal an increase in the yield of micronuclei at the Bragg peak location. Assessment of such biological parameters employing the described in vitro experimental system may provide improved platforms to measure a number of biological consequences of shielding materials across the Bragg curve for high charge and energy (HZE) ions.

Desai, N.↗

Characteristics of ring-cusp discharge chambers

Measurements have been obtained for the operating characteristics of a 30 cm diameter ring-cusp ion thruster (RCIT), quantitatively comparing its performance parameters to those of a divergent-field J-series cluster of the same size. The high level of performance established for the RCIT is due to its maintenance of both a higher primary-electron population and Maxwellian-electron temperature, as the beam-ion production cost is reduced to its baseline value. Ion losses to the discharge-chamber walls can be reduced by an applied electrostatic field.

Matossian, J. N.↗

Accurate ab initio quartic force fields for the ions HCO(+) and HOC(+)

The quartic force fields of HCO(+) and HOC(+) have been computed using augmented coupled cluster methods and basis sets of spdf and spdfg quality. Calculations on HCN, CO, and N2 have been performed to assist in calibrating the computed results. Going from an spdf to an spdfg basis shortens triple bonds by about 0.004 A, and increases the corresponding harmonic frequency by 10-20/cm, leaving bond distances about 0.003 A too long and triple bond stretching frequencies about 5/cm too low. Accurate estimates for the bond distances, fundamental frequencies, and thermochemical quantities are given. HOC(+) lies 37.8 +/- 0.5 kcal/mol (0 K) above HCO(+); the classical barrier height for proton exchange is 76.7 +/- 1.0 kcal/mol.

Martin, J. M. L.↗

Gamma rays from clusters of galaxies

The possibility that Coma-type radio halos are powered by secondary electrons produced during the decay of energetic charge pions is examined. These pions are generated by the collision of cosmic ray protons with thermal ions in the intracluster medium. A calculation of both the cosmic ray concentration and the spectrum needed to power the halo in the Coma cluster is presented. The gamma-ray flux is predicted and it is shown that this model can be tested with the Gamma Ray Observatory Energetic Gamma Ray Experiment Telescope.

Vestrand, W. Thomas↗

Studies of Light and Charge Produced by Alpha-Particles in High-Pressure Xenon

The results of measurements of scintillation light induced by alpha-particles in high-pressure Xe are presented. The ratio of N(sub ex)/N(sub i) and the intensity and time characteristics of the luminescence signal have been measured for different densities up to 0.74 g/cc. The role and mechanisms of the electron-ion recombination in high-pressure gas have been investigated. The existence of clusters and self-trapped excitons above 0.6 g/cc has been observed and discussed. This work is a part of a development program of high-pressure Xe detectors for low-energy gamma rays.

Bolotnikov, Aleksey↗

Involvement of DNA-PK(sub cs) in DSB Repair Following Fe-56 Ion Irradiation

When cells are exposed to radiation, cellular lesions are induced in the DNA including double strand breaks (DSBs), single strand breaks and clustered DNA damage, which if not repaired with high fidelity may lead to detrimental biological consequences. Complex DSBs are induced by ionizing radiation and characterized by the presence of base lesions close to the break termini. They are believed to be one of the major causes of the biological effects of IR. The complexity of DSBs increases with the ionization density of the radiation and these complex DSBs are distinct from the damage induced by sparsely ionizing gamma-radiation. It has been hypothesized that complex DSBs produced by heavy ions in space pose problems to the DNA repair machinery. We have used imm uno-cyto-chemical staining of phosphorylated histone H2AX (gamma-H2AX) foci, as a marker of DSBs. We have investigated the formation and loss of gamma-H2AX foci and RAD51 foci (a protein involved in the homologous recombination pathway) in mammalian cells induced by low fluences of low-LET gamma-radiation and high-LET Fe-56 ions (1GeV/n, 151 keV/micron LET). M059J and M059K cells, which are deficient and proficient in DNA-PK(sub cs) activity respectively, were used to examine the role of DNA-PK(sub cs), a key protein in the non-homologous end joining (NHEJ) pathway of DSB repair, along with HF19 human fibroblasts. Followi ng irradiation with Fe-56 ions the rate of repair was slower in M059J cells compared with that in M059K, indicating a role for DNA-PK(sub cs) in the repair of DSB induced by Fe-56 ions. However a small percentage of DSBs induced are rejoined within 5 h although many DSBs still persist up to 24 h. When RAD51 was examined in M059J/K cells, RAD51 foci are visible 24 hours after irradiation in approximately 40% of M059J cells compared with <5% of M059K cells indicating that persistent DSBs or those formed at stalled replication forks recruit RAD51 in DNA-PK(sub cs) deficient cells. Following 1 Gy gamma-radiation the induction of gamma-H2AX foci is similar in M059J and M059K cells. However, the repair rate of DSBs is slower in M059J cells than in M059K as shown previously but faster than seen with DSB induced by 56Fe ions. Vanillin, an inhibitor of DNA-PK(sub cs), reduces significantly the rate of DSB repair in HF19 cells following 1 Gy gamma-radiation but at 0.25 Gy gamma-irradiation the rate of DSB repair is similar in the presence or absence vanillin, thus suggesting the repair of a sub-set of DSBs induced by low dose, low-LET radiation does not require DNA-PK(sub cs). This sub-set of DSBs is formed in lower yield with high LET radiation. T he complexity of DNA DSBs induced by HZE radiation will be discussed in terms of reduced repair efficiency and provide scope to model different sub-classes of DSBs as precursors that may lead to the detrimental health effects of HZE radiation.

O'Neill, Peter↗

Helium-Like Iron Line Temperature Diagnostics in Clusters of Galaxies

The emission complex around 6.7 keV, arising from He-like Fe lines and their dielectronic satellites, has been observed at low resolution in a number of clusters of galaxies. With sufficient spectral resolution as in, e.g., solar flare observations, the ratio, G = (x + y + z)/w, of the intercombination (x and y) and forbidden (z) to the resonance (w) lines arising from the n = 2 level of the He-like ion, is a sensitive temperature diagnostic. We examine this role for G in the context of spatially and spectrally resolved observations of clusters of galaxies. The temperature behavior of this ratio is strongly dependent on the spectral resolution. We introduce an alternative definition for G that includes the contribution of satellite lines and improves the temperature fidelity of this diagnostic. We find that deprojection of the observed value of G along a line of sight through the cluster can yield accurate temperature profiles for temperatures in the range 10(exp 7)-10(exp 8) K that do not suffer from the cluster model uncertainties inherent in deconvolution of broad-band X-ray surface brightness profiles.

Swartz, Douglas A.↗

Integration of the QMSFRG Database into the HZETRN Code

Accurate nuclear interaction data bases are needed for describing the transport of space radiation in matter including space craft structures, atmospheres, and tissues. Transport models support the identification and development of new material concepts for human and electronic part protection. Quantum effects are manifested in nuclear reactions in several ways including interference effects between terms in the multiple scattering series, the many-body nuclear wave functions (for e.g. the roles of shell structure and Fermi momentum) and nuclear clustering. The quantum multiple scattering fragmentation model (QMSFRG) is a comprehensive model for generating nuclear interaction databases for galactic cosmic ray (GCR) transport. Other nuclear databases including the NUCFRG model and Monte-Carlo simulation codes such as FLUKA, LAHET, HETC, and GEANT ignore quantum effects. These codes fail to describe many important features of nuclear reactions and are thus inaccurate for the evaluation of materials for radiation protection. Previously we have shown that quantum effects are manifested through constructive interference in forward production spectra, the effects of Fermi momentum on production spectra, cluster nuclei knockout, and the nuclear response function. Quantum effects are especially important for heavy ions with mass numbers less than 20 that dominate radiation transport in human tissues and for the materials that are expected to be superior in space radiation protection. We describe the integration of the QMSFRG model into the HZETRN transport code. Integration milestones include proper treatment of odd-even charge-mass effects in nuclear fragmentation and the momentum distribution of nucleon production from GCR primary heavy ions. We have also modified the two-body amplitudes in the model to include nuclear medium effects. In order to include a comprehensive description of the GCR isotopic composition in materials, we have described the isotopic composition of the GCR by extending the 59-isotope version of HZETRN to an 120-isotope version. The isotopic composition of most primary GCR elements (including H, He, C, N, O, Ne, Mg, Si, Ar, Ca, Cr, and Fe) are included in the extended model. We discuss results for the high-energy neutron composition inside materials, and the charge and mass distribution for benchmark GCR problems.

Cucinotta, F. A.↗

Structure, vibrational spectrum, and energetics of the CH5(+) ion - A theoretical investigation

Analytic derivative techniques are utilized to determine molecular geometries, vibration spectra, molecular force field, proton affinity, and energetics of clustering of protonated methane. It is observed that the geometries are gradient optimized, while the harmonic force fields and IR intensities are also determined analytically at the SCF level. It is determined that the frequency of the torsional model for rotation of the H2 about the pseudothreefold axis of the CH3(+) group is extremely low, and the proton affinity of CH4 is calculated as 129.0 kcal/mol.

Komornicki, Andrew↗

Polar, Cluster and SuperDARN Evidence for High-Latitude Merging during Southward IMF: Temporal/Spatial Evolution

Magnetic merging on the dayside magnetopause often occurs at high latitudes. Polar measured fluxes of accelerated ions and wave Poynting vectors while skimming the subsolar magnetopause. The measurements indicate that their source was located to the north of the spacecraft, well removed from expected component merging sites. This represents the first use of wave Poynting flux as a merging discriminator at the magnetopause. We argue that wave Poynting vectors, like accelerated particle fluxes and the Walen tests, are necessary, but not sufficient, conditions, for identifying merging events. The Polar data are complemented with nearly simultaneous measurements from Cluster in the northern cusp, with correlated observations from the SuperDARN radar, to show that the locations and rates of merging vary. Magnetohydrodynamic (MHD) simulations are used to place the measurements into a global context. The MHD simulations confirm the existence of a high-latitude merging site and suggest that Polar and SuperDARN observed effects are attributable to both exhaust regions of a temporally varying X-line. A survey of 13 merging events places the location at high latitudes whenever the interplanetary magnetic field (IMF) clock angle is less than approximately 150 degrees. While inferred high-latitude merging sites favor the antiparallel merging hypothesis, our data alone cannot exclude the possible existence of a guide field. Merging can even move away from equatorial latitudes when the IMF has a strong southward component. MHD simulations suggest that this happens when the dipole tilt angle increases or when IMF B(sub X) increases the effective dipole tilt.

Maynard, N. C.↗

Multiscale Studies of the Three-Dimensional Dayside X-Line

We review recent experience from the Cluster, Double Star, and THEMIS missions for lessons that apply to the upcoming Magnetospheric Multiscale Mission (MMS) being developed for launch in 2014. On global scales, simulation and statistical studies lead to mean congurations of dayside reconnection, implying specific relative alignments of the inflow magnetic fields and X-line, with implications for MMS operations designed to maximize the number of close encounters with the diffusion region. At intermediate MHD-to-ion scales, reconstruction of features created by one or two X-lines have developed to the point where data from a cluster of spacecraft can determine their temporal trends and the approximate three-dimensional X-line structure. Recent petascale particle-in-cell (PIC) simulations of reconnection encompass three spatial dimensions with excellent resolution, and make striking predictions of electron scale physics that creates complex interacting flux ropes under component reconnection. High time resolution measurements from MMS will determine the detailed electron scale kinetics embedded within the global and MHDion scale contexts. These developments will lead to the refinement of our three-dimensional multiscale picture of reconnection, yielding improved understanding of the global, MHD, and local physics controlling the onset or quenching, variability, and mean rate of reconnection. This in turn will enable improved predictability of the structural features created by transient reconnection, and their space weather consequences.

Reconnection↗

Contemplating the plasmalemmal control center model

An abundant epidermal mechanosensory calcium-selective ion channel appears able not only to detect mechanical stimuli such as those that initiate gravitropism but also to detect thermal, electrical, and various chemical stimuli. Because it responds to multimodal input with a second messenger output, this channel system seems likely to be an integrator that can engage in feedbacks with many other systems of the cell--and feedback is the hallmark of regulation. In general, the mechanical tension required for channel activation is likely transmitted from the relatively rigid cell wall to the plasma membrane system via linkage or adhesion sites that display antigenicities recognized by antibodies to animal beta-1 integrin, vitronectin, and fibronectin and which have mechanical connections to the cytoskeleton. Thus, functionally, leverage exerted against any given adhesion site will tend to control channels within a surrounding domain. Reactions initiated by passage of calcium ions through the channels could presumably be more effectively regulated if channels within the domains were somewhat clustered and if appropriate receptors, kinases, porters, pumps, and some key cytoskeletal anchoring sites were in turn clustered about them. Accumulating evidence suggests not only that activity of clusters of channels may contribute to control of cytoskeletal architecture and of regulatory protein function within their domain, but also that both a variety of regulatory proteins and components of the cortical cytoskeleton may contribute to control of channel activity. The emerging capabilities of electronic optical microscopy are well suited for resolving the spatial distributions of many of these cytoskeletal and regulatory molecules in living cells, and for following some of their behaviors as channels are stimulated to open and cytosolic calcium builds in their vicinity. Such microscopy, coupled with biochemical and physiological probing, should help to establish the nature of the feedback loops putatively controlled by the linkage sites and their channel domains.

Review↗

Searching for Turbulent Spectra in Mutliple Spacecraft Observations

The subject of magnetohydrodynamic simulations in the 1980's, magnetic turbulence has reemerged as a favored explanation for the production of fast magnetic reconnection. Recent three-dimensional simulations reveal the formation of secondary islands that serve to shorten the current sheet and increase the accelerating electric field, while both simulations and observations witness electron holes whose collapse energizes electrons. However, little work has been done to investigate the presence of turbulent magnetic and electric field spectra in association with in situ reconnection observations in space. In this study we address this deficiency by analyzing the wavelength spectra of two reconnection events established by multiple spacecraft observations in previous publications. We apply a k-filtering analysis to determine the wave vectors. To optimize the quality of the k-filtering analysis and minimize aliasing, we select multi-spacecraft observations having optimal spacecraft tetrahedral geometry and dimensions that resolve wavelengths within the ion diffusion region. We have chosen one dayside and one nightside reconnection event each observed by the Cluster spacecraft. Spatial correlation between the reconnecting current sheet and a turbulent magnetic spectrum supports an association between turbulence and reconnection in space. The k-filtering method, a wavelet time-frequency spectrum, and a polarization analysis serve to identify wave modes associated with the turbulence. A calculation of the reconnection electric field based on the normal component of the reconnecting magnetic field provides an estimate of the reconnection rate.

Wendel, Deirdre E.↗

Identification of Columnar Aerosol Types Under High Aerosol Optical Depth Conditions for a Single AERONET Site in Korea

Dominant aerosol types were classified using level 2 inversion products for the Anmyon Aerosol Robotic Network (AERONET) site in Korea for the period 19992007. The aerosol types were mineral dust (MD), MD mixed with carbon, and black carbonmixed coarse particles (BCCP) for coarsemode aerosols, black carbon (BC), organic carbon (OC), and secondary inorganic ions (SII) for fine mode aerosols, and mixed particles between. The classification was carried out using a clustering method based on parameters, including single scattering albedo (SSA), absorption Angstrom exponent (AAE), and fine mode volume fraction (FMVF). Among the seven aerosol types, MD was distinct, with the highest AAE and a very low FMVF and SII with the highest SSA and FMVF. BCCP was introduced to designate coarse particles mixed with BC, of which the AAE was lower than 1, despite a low FMVF. In addition to a large difference in AAE between BC andOC, the SSA ofOC was larger than that of BC, indicating the effects of the white smoke produced from the smoldering phase of biomass burning. Monthly variations of the aerosol types were well interpreted by meteorology and emissions and coincided with those in the previous studies. Applying our results to well-characterized global AERONET sites, we confirmed that the aerosol types at Anmyon were valid at other sites. However, the results also showed that the mean properties for aerosol types were influenced by the specific aerosols prevalent at the study sites.

Choi, Yongjoo↗

Fundamental studies of gas phase ionic reactions by ion mobility spectrometry

Ion mobility spectrometry (IMS) provides a promising approach to the study of gas phase ionic reactions in buffer gases at unusually high pressures. This point is illustrated here by studies of the Sn2 nucleophilic displacement reaction, Cl(-) + CH3Br yields Br + CH3Br, using IMS at atmospheric pressure. The equilibrium clustering reaction, Cl(-)(CHCI3)(n - 1) + CHCI3 yields Cl(-)(CHCI3)(n), where n = 1 and 2, and the effect of clustering on the Sn2 reaction with CH3Br have also been characterized by this IMS-based kinetic method. Present problems and anticipated improvements in the application of ion mobility spectrometry to studies of other gas phase ionic processes are discussed.

Giles, K.↗

Comparison of Geant4-DNA and RITRACKS/RITCARD: Microdosimetry, Nanodosimetry and DNA Damage Predictions for Low to High LET Ions

Low linear energy transfer (LET) ionizing radiations induce homogeneously distributed DNA damage at the cellular scale, while high LET ionizing radiations are well known to create complex biological damage including clustered double strand breaks (DSB). Clustered DSB are critical events that are difficult to repair, leading to increased biological outcomes compared to low LET radiation exposure. Recent studies have shown that DNA compaction, which can be actively modified by the cell to allow DNA repair, influences the yield of DSB [1]. The goal of this work is to determine the impact of DNA compaction on chromosome aberration formation, a biomarker of radiation-induced cancer risk. The RITRACKS track structure code [2], together with the RITCARD code [3], allow one to simulate the transport of high LET ions, calculate DNA damage and repair, and chromosome aberration formation, but does not include detailed geometrical models of DNA. The Geant4-DNA toolkit provides such detailed models with different levels of DNA compaction [1,4], but does not model chromosome aberration formation. In this work, these highly detailed DNA geometries are used to compute DNA breaks with Geant4-DNA and combine the results with the RITCARD tool to compute chromosome aberrations. As a first step, we compared the transport models used in RITRACKS and Geant4-DNA and newly released heavy ion model transport (G4DNARuddIonisationExtendedModel Geant4 v11.2) to ensure consistency between the physical stage of the two radiation transport codes. We compared energy deposition at the micrometric and nanometric scales for different ions (H 250 MeV, H 150 Me, He 250 MeV/n, C 290 MeV/n, O 350 MeV/n, O 55 MeV/n, Si 170MeV/n, Ti 300 MeV/n, Ti 300 MeV/n, Fe 600 MeV/n, Fe 450 MeV/n and Fe 300 MeV/n) with LET ranging from ~0.4 keV/μm up to 235 keV/μm. Excellent agreement is found for both microdosimetric and nanodosimetric spectra for all ion types and energies. The calculation of DNA breaks and their complexity with the Geant4-DNA is an ongoing work, and comparison with RITCARD will be presented based on result availability at the time of the conference. [1] Tang et al. (2019). Med. Phys., 46(3), 1501-1511. [2] Plante et al. (2008). NJP, 10(12), 125020. [3] Plante et al. (2019). Rad. Res., 192(3), 282-298. [4] Incerti et al. (2018). Med. Phys., 45(8), e722-e739.

Floriane Poignant↗

A simple method for obtaining a three-dimensional proton distribution function from Voyager plasma data

The main sensor of the Vogager plasma experiment consists of a cluster of three, modulated-grid Faraday cups whose normals are arranged symmetrically about the symmetry axis of the cluster at an angle of 20 degrees to that axis. In interplanetary space, each cup explores the positive ion distribution by accepting particles from contiguous slices in velocity space. The slices are narrow in the direction of the normal to the modulating grid but are broad in planes parallel to that grid. The resulting three sets of measurements can be combined to yield the three-dimensional distribution function in the following way: the distribution function is assumed to be gyrotropic. For each value of speed in a frame of reference moving with the bulk velocity of the solar wind, the variation of the distribution function with angle from the field direction is represented by a series of Legendre polynomials. Effects such as double-streaming and heat flow can be well represented by using only the first three terms of the series which are fully specified by the measurements. Examples of the use of this method in the analysis of Voyager data are shown.

Olbert, S.↗