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At least 163 records · Page 9

Breadboard stellar tracker system test report, volume 1

The performance of a star tracker equipped with a focal plane detector was evaluated. The CID board is an array of 256 x 256 pixels which are 20 x 20 micrometers in dimension. The tracker used for test was a breadboard tracker system developed by BASD. Unique acquisition and tracking algorithms are employed to enhance performance. A pattern recognition process is used to test for proper image spread function and to avoid false acquisition on noise. A very linear, high gain, interpixel transfer function is derived for interpolating star position. The lens used in the tracker has an EFL of 100 mm. The tracker has an FOV of 2.93 degrees resulting in a pixel angular subtense of 41.253 arc sec in each axis. The test procedure used for the program presented a star to the tracker in a circular pattern of positions; the pattern was formed by projecting a simulated star through a rotatable deviation wedge. Further tests determined readout noise, Noise Equivalent Displacement during track, and spatial noise during acquisition by taking related data and reducing it.

Kollodge, J. C.↗

Development of signal processing algorithms for ultrasonic detection of coal seam interfaces

A pattern recognition system is presented for determining the thickness of coal remaining on the roof and floor of a coal seam. The system was developed to recognize reflected pulse echo signals that are generated by an acoustical transducer and reflected from the coal seam interface. The flexibility of the system, however, should enable it to identify pulse-echo signals generated by radar or other techniques. The main difference being the specific features extracted from the recorded data as a basis for pattern recognition.

Purcell, D. D.↗

Feature extraction and classification algorithms for high dimensional data

Feature extraction and classification algorithms for high dimensional data are investigated. Developments with regard to sensors for Earth observation are moving in the direction of providing much higher dimensional multispectral imagery than is now possible. In analyzing such high dimensional data, processing time becomes an important factor. With large increases in dimensionality and the number of classes, processing time will increase significantly. To address this problem, a multistage classification scheme is proposed which reduces the processing time substantially by eliminating unlikely classes from further consideration at each stage. Several truncation criteria are developed and the relationship between thresholds and the error caused by the truncation is investigated. Next an approach to feature extraction for classification is proposed based directly on the decision boundaries. It is shown that all the features needed for classification can be extracted from decision boundaries. A characteristic of the proposed method arises by noting that only a portion of the decision boundary is effective in discriminating between classes, and the concept of the effective decision boundary is introduced. The proposed feature extraction algorithm has several desirable properties: it predicts the minimum number of features necessary to achieve the same classification accuracy as in the original space for a given pattern recognition problem; and it finds the necessary feature vectors. The proposed algorithm does not deteriorate under the circumstances of equal means or equal covariances as some previous algorithms do. In addition, the decision boundary feature extraction algorithm can be used both for parametric and non-parametric classifiers. Finally, some problems encountered in analyzing high dimensional data are studied and possible solutions are proposed. First, the increased importance of the second order statistics in analyzing high dimensional data is recognized. By investigating the characteristics of high dimensional data, the reason why the second order statistics must be taken into account in high dimensional data is suggested. Recognizing the importance of the second order statistics, there is a need to represent the second order statistics. A method to visualize statistics using a color code is proposed. By representing statistics using color coding, one can easily extract and compare the first and the second statistics.

Lee, Chulhee↗

Tau-REx I: A next generation retrieval code for exoplanetary atmospheres

Spectroscopy of exoplanetary atmospheres has become a well established method for the characterization of extrasolar planets. We here present a novel inverse retrieval code for exoplanetary atmospheres. T-REx(Tau Retrieval for Exoplanets) is a line-by-line radiative transfer fully Bayesian retrieval framework. T-REx includes the following features:(1) the optimized use of molecular line lists from the ExoMol project; (2) an unbiased atmospheric composition prior selection, through custom built pattern recognition software; (3) the use of two independent algorithms to fully sample the Bayesian likelihood space: nested sampling as well as a more classical Markov Chain Monte Carlo approach; (4) iterative Bayesian parameter and model selection using the full Bayesian Evidence as well as the Savage–Dickey Ratio for nested models; and (5) the ability to fully map very large parameter spaces through optimal code parallelization and scalability to cluster computing. In this publication we outline the T-REx framework and demonstrate, using a theoretical hot-Jupiter transmission spectrum, the parameter retrieval and model selection. We investigate the impact of signal-to-noise ratio and spectral resolution on the retrievability of individual model parameters, both in terms of error bars on the temperature and molecular mixing ratios as well as its effect on the model’s global Bayesian evidence.

79 ASTRONOMY AND ASTROPHYSICS↗

Data compression in digitized lines

The problem of data compression is very important in digital photogrammetry, computer assisted cartography, and GIS/LIS. In addition, it is also applicable in many other fields such as computer vision, image processing, pattern recognition, and artificial intelligence. Consequently, there are many algorithms available to solve this problem but none of them are considered to be satisfactory. In this paper, a new method of finding critical points in a digitized curve is explained. This technique, based on the normalized symmetric scattered matrix, is good for both critical points detection and data compression. In addition, the critical points detected by this algorithm are compared with those by zero-crossings.

Thapa, Khagendra↗

Weighted adaptive algorithms for estimation of Gaussian distribution parameters

Two weighted adaptive algorithms are proposed for updating the estimates of the mean vector and the covariance matrix, respectively, in a multispectral pattern recognition system. To achieve computational efficiency, the auxiliary matrices have been utilized in the algorithm for covariance matrix updating. Enhancements in the performance accuracy of a multispectral processing system and extensions of the Gaussian maximum likelihood classification capabilities to larger scale surveys are the motivations in developing the algorithms presented herein.

Chang, C. Y.↗

Design and testing of the first 2D Prototype Vertically Integrated Pattern Recognition Associative Memory

An associative memory-based track finding approach has been proposed for a Level 1 tracking trigger to cope with increasing luminosities at the LHC. The associative memory uses a massively parallel architecture to tackle the intrinsically complex combinatorics of track finding algorithms, thus avoiding the typical power law dependence of execution time on occupancy and solving the pattern recognition in times roughly proportional to the number of hits. This is of crucial importance given the large occupancies typical of hadronic collisions. The design of an associative memory system capable of dealing with the complexity of HL-LHC collisions and with the short latency required by Level 1 triggering poses significant, as yet unsolved, technical challenges. For this reason, an aggressive R&D program has been launched at Fermilab to advance state of-the-art associative memory technology, the so called VIPRAM (Vertically Integrated Pattern Recognition Associative Memory) project. The VIPRAM leverages emerging 3D vertical integration technology to build faster and denser Associative Memory devices. The first step is to implement in conventional VLSI the associative memory building blocks that can be used in 3D stacking, in other words, the building blocks are laid out as if it is a 3D design. In this paper, we report on the first successful implementation of a 2D VIPRAM demonstrator chip (protoVIPRAM00). The results show that these building blocks are ready for 3D stacking.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Feature Extraction Based on Decision Boundaries

In this paper, a novel approach to feature extraction for classification is proposed based directly on the decision boundaries. We note that feature extraction is equivalent to retaining informative features or eliminating redundant features; thus, the terms 'discriminantly information feature' and 'discriminantly redundant feature' are first defined relative to feature extraction for classification. Next, it is shown how discriminantly redundant features and discriminantly informative features are related to decision boundaries. A novel characteristic of the proposed method arises by noting that usually only a portion of the decision boundary is effective in discriminating between classes, and the concept of the effective decision boundary is therefore introduced. Next, a procedure to extract discriminantly informative features based on a decision boundary is proposed. The proposed feature extraction algorithm has several desirable properties: (1) It predicts the minimum number of features necessary to achieve the same classification accuracy as in the original space for a given pattern recognition problem; and (2) it finds the necessary feature vectors. The proposed algorithm does not deteriorate under the circumstances of equal class means or equal class covariances as some previous algorithms do. Experiments show that the performance of the proposed algorithm compares favorably with those of previous algorithms.

Lee, Chulhee↗

ISMB Conference Funding to Support Attendance of Early Researchers and Students

ISMB Conference Funding for Students and Young Scientists Historical Description The Intelligent Systems for Molecular Biology (ISMB) conference has provided a general forum for disseminating the latest developments in bioinformatics on an annual basis for the past 22 years. ISMB is a multidisciplinary conference that brings together scientists from computer science, molecular biology, mathematics and statistics. The goal of the ISMB meeting is to bring together biologists and computational scientists in a focus on actual biological problems, i.e., not simply theoretical calculations. The combined focus on “intelligent systems” and actual biological data makes ISMB a unique and highly important meeting. 21 years of experience in holding the conference has resulted in a consistently well-organized, well attended, and highly respected annual conference. "Intelligent systems" include any software which goes beyond straightforward, closed-form algorithms or standard database technologies, and encompasses those that view data in a symbolic fashion, learn from examples, consolidate multiple levels of abstraction, or synthesize results to be cognitively tractable to a human, including the development and application of advanced computational methods for biological problems. Relevant computational techniques include, but are not limited to: machine learning, pattern recognition, knowledge representation, databases, combinatorics, stochastic modeling, string and graph algorithms, linguistic methods, robotics, constraint satisfaction, and parallel computation. Biological areas of interest include molecular structure, genomics, molecular sequence analysis, evolution and phylogenetics, molecular interactions, metabolic pathways, regulatory networks, developmental control, and molecular biology generally. Emphasis is placed on the validation of methods using real data sets, on practical applications in the biological sciences, and on development of novel computational techniques. The ISMB conferences are distinguished from many other conferences in computational biology or artificial intelligence by an insistence that the researchers work with real molecular biology data, not theoretical or toy examples; and from many other biological conferences by providing a forum for technical advances as they occur, which otherwise may be shunned until a firm experimental result is published. The resulting intellectual richness and cross-disciplinary diversity provides an important opportunity for both students and senior researchers. ISMB has become the premier conference series in this field with refereed, published proceedings, establishing an infrastructure to promote the growing body of research.

60 APPLIED LIFE SCIENCES↗

A mathematical discussion concerning the performance of multilayer perceptron-type artificial neural networks through use of orthogonal bipolar vectors

This work proposes the use of orthogonal bipolar vectors (OBV) as targets for multilayer perceptron (MLP) Artificial neural networks pertaining to the pattern recognition field. Implications involving this proposal are supported by a proper mathematical discussion. This study shows that the use of OBV as targets improves the class identification performance of MLP networks for pattern recognition with more than two classes when compared to the widely used conventional target bipolar vector (CBV). In addition to the overall performance improvement, it is possible to obtain high recognition rates with fewer training epochs, while keeping a feasible generalization with other data. This behavior is related to the Euclidean distance of the points in the output space, which is much higher in the case of OBVs. Therefore, with a greater distance between the points in the output space, the MLP network becomes less prone to associate trained outputs with incorrect targets. The mathematical discussion in this study is based on the backpropagation training algorithm. In addition to the mathematical discussion, results from experiments with real data are presented. These results follow those obtained by mathematical derivations. Real data sets used in the experiments are available from: (a) the Semeion Handwritten Digit of Machine Learning Repository, international repository; (b) Iris Image Database from the Chinese Academy of Sciences—CASIA; (c) Australian Sign Language, signs of Machine Learning Repository, international repository. Experiments were conducted to measure the mean Euclidean distance between the MLP network output subjected to a given input pattern and outputs related to other pattern classifications. Experimental results show that MLP networks trained with OBVs were able to ensure a Euclidean distance between the output and incorrect targets greater than MLP networks trained with CBVs (by up to 4 times for handwritten, by up to 12 times for iris images and by up to 10 times for Auslan signs language). As such, the adoption of OBVs as target vectors for MLPs reduces the computational effort for training the network.

97 MATHEMATICS AND COMPUTING↗

Monitoring and Control of Chemical Composition of InGaN Layers During MOCVD

This Department of Energy SBIR Phase II grant targets the inefficiency of the epitaxial processes used to deposit wide band-gap semiconductor thin films that are an essential part of the next generation high-brightness LEDs for solid state lighting. Non-uniformity of the layers over a single wafer and non-repeatability over the wafers in a single batch, separate batches and separate reactors are some of the primary source of reduced manufacturing yield. The team performed extensive research, development and validation of an in-situ spectroscopic optical monitoring and epitaxial process control system. The system monitors the LED thin films as they grow on the individual wafers inside the epitaxial reactor, records the signal in a broad spectral range and processes the information to retrieve essential film quality parameters and their variation over a single wafer, all the wafers in a batch and multiple batches. A novel software algorithm is implemented, which performs real-time spectral pattern recognition and displays any abnormalities or differences in the deposition, which is used by the engineer to optimize the epitaxial process. The project resulted in the optimization of the LED film growth and improvement of its uniformity and repeatability, reducing the cost of the final LED devices.

36 MATERIALS SCIENCE↗

Antenna analysis using neural networks

Conventional computing schemes have long been used to analyze problems in electromagnetics (EM). The vast majority of EM applications require computationally intensive algorithms involving numerical integration and solutions to large systems of equations. The feasibility of using neural network computing algorithms for antenna analysis is investigated. The ultimate goal is to use a trained neural network algorithm to reduce the computational demands of existing reflector surface error compensation techniques. Neural networks are computational algorithms based on neurobiological systems. Neural nets consist of massively parallel interconnected nonlinear computational elements. They are often employed in pattern recognition and image processing problems. Recently, neural network analysis has been applied in the electromagnetics area for the design of frequency selective surfaces and beam forming networks. The backpropagation training algorithm was employed to simulate classical antenna array synthesis techniques. The Woodward-Lawson (W-L) and Dolph-Chebyshev (D-C) array pattern synthesis techniques were used to train the neural network. The inputs to the network were samples of the desired synthesis pattern. The outputs are the array element excitations required to synthesize the desired pattern. Once trained, the network is used to simulate the W-L or D-C techniques. Various sector patterns and cosecant-type patterns (27 total) generated using W-L synthesis were used to train the network. Desired pattern samples were then fed to the neural network. The outputs of the network were the simulated W-L excitations. A 20 element linear array was used. There were 41 input pattern samples with 40 output excitations (20 real parts, 20 imaginary). A comparison between the simulated and actual W-L techniques is shown for a triangular-shaped pattern. Dolph-Chebyshev is a different class of synthesis technique in that D-C is used for side lobe control as opposed to pattern shaping. The interesting thing about D-C synthesis is that the side lobes have the same amplitude. Five-element arrays were used. Again, 41 pattern samples were used for the input. Nine actual D-C patterns ranging from -10 dB to -30 dB side lobe levels were used to train the network. A comparison between simulated and actual D-C techniques for a pattern with -22 dB side lobe level is shown. The goal for this research was to evaluate the performance of neural network computing with antennas. Future applications will employ the backpropagation training algorithm to drastically reduce the computational complexity involved in performing EM compensation for surface errors in large space reflector antennas.

Smith, William T.↗

Clustering of tethered satellite system simulation data by an adaptive neuro-fuzzy algorithm

Recent developments in neuro-fuzzy systems indicate that the concepts of adaptive pattern recognition, when used to identify appropriate control actions corresponding to clusters of patterns representing system states in dynamic nonlinear control systems, may result in innovative designs. A modular, unsupervised neural network architecture, in which fuzzy learning rules have been embedded is used for on-line identification of similar states. The architecture and control rules involved in Adaptive Fuzzy Leader Clustering (AFLC) allow this system to be incorporated in control systems for identification of system states corresponding to specific control actions. We have used this algorithm to cluster the simulation data of Tethered Satellite System (TSS) to estimate the range of delta voltages necessary to maintain the desired length rate of the tether. The AFLC algorithm is capable of on-line estimation of the appropriate control voltages from the corresponding length error and length rate error without a priori knowledge of their membership functions and familarity with the behavior of the Tethered Satellite System.

Mitra, Sunanda↗

The Liquid Argon Software Toolkit (LArSoft): Goals, Status and Plan

LArSoft is a toolkit that provides a software infrastructure and algorithms for the simulation, reconstruction and analysis of events in Liquid Argon Time Projection Chambers (LArTPCs). It is used by the ArgoNeuT, LArIAT, MicroBooNE, DUNE (including 35ton prototype and ProtoDUNE) and SBND experiments. The LArSoft collaboration provides an environment for the development, use, and sharing of code across experiments. The ultimate goal is to develop fully automatic processes for reconstruction and analysis of LArTPC events. The toolkit is based on the art framework and has a well-defined architecture to interface to other packages, including to GEANT4 and GENIE simulation software and the Pandora software development kit for pattern recognition. It is designed to facilitate and support the evolution of algorithms including their transition to new computing platforms. The development of the toolkit is driven by the scientific stakeholders involved. The core infrastructure includes standard definitions of types and constants, means to input experiment geometries as well as meta and event- data in several formats, and relevant general utilities. Examples of algorithms experiments have contributed to date are: photon-propagation; particle identification; hit finding, track finding and fitting; electromagnetic shower identification and reconstruction. We report on the status of the toolkit and plans for future work.

Pordes, Rush↗

Distributed non-negative matrix factorization with determination of the number of latent features

The holistic analysis and understanding of the latent (that is, not directly observable) variables and patterns buried in large datasets is crucial for data-driven science, decision making and emergency response. Such exploratory analyses require devising unsupervised learning methods for data mining and extraction of the latent features, and non-negative matrix factorization (NMF) is one of the prominent such methods. NMF is based on compute-intense non-convex constrained minimization, which, for large datasets requires fast and distributed algorithms. However, current parallel implementations of NMF fail to estimate the number of latent features. In practice, identifying these features is both difficult and significant for pattern recognition and latent feature analysis, especially for large dense matrices. Here, we introduce a distributed NMF algorithm coupled with distributed custom clustering followed by a stability analysis on dense data, which we call DnMFk, to determine the number of latent variables. The results on synthetic data and the classical Swimmer data set demonstrate the accuracy of model determination while scaling nearly linearly across multiple processors for large data. Further, we employ DnMFk to determine the number of hidden features from a terabyte matrix.

97 MATHEMATICS AND COMPUTING↗

Using dorsal surface for individual identification of dairy calves through 3D deep learning algorithms

Advances in machine learning techniques have allowed the development of computer vision systems (CVS) that can accurately predict several phenotypes of interest for livestock operations. In this context, 3D images taken from a top-down view are particularly useful for estimating body condition score, growth development, and body biometrics in cattle. Frequently, such CVS rely on identification (ID) systems, such as electronic tags, as a way to match animal ID and the predicted phenotype. However, the same 3D images used to predict body weight and other animal biometrics could be adopted for animal recognition as well. Such alternative would optimize CVS to recognize animal ID and monitor growth development simultaneously while leveraging the same hardware infrastructure. Furthermore, this strategy could be used to recognize animals with similar color patterns. Nonetheless, growing animals are continuously changing body shape, which could limit its use as an invariant feature for pattern recognition. Thus, the objectives of this study were: (1) to compare algorithms for different 3D object representations to identify individual animals; and (2) to evaluate how short-term changes in body shape due to animal growth affect the predictive performance of these algorithms. For objective 1, the algorithms were trained (n = 4,558) and tested (n = 1,139) using images from 38 Holstein calves. For objective 2, we designed three different experiments using images (n = 2,347) from five Holstein calves taken over six weeks during their growing period, always training and testing on different weeks. Each experiment evaluated how changing a different parameter of the image capturing procedure affected the predictive ability of the trained algorithms. In the first experiment, we varied the total number of images per animal in the training set; in the second experiment, we varied the number of weeks while keeping a fixed number of images in the training set; and in the third experiment, we skipped weeks between images in the training and test sets. The F 1 score for objective (1) was up to 0.804 when testing with the last frames of each video, and up to 0.959 when using random frames for testing. For objective (2), the F 1 score was up to 0.947 for the first experiment when using 130 images per animal; up to 0.979 for the second experiment when using all five weeks; and up to 0.917 when not skipping weeks between training and testing. In conclusion, these results show that deep learning algorithms can be used to identify individual animals through their dorsal area 3D surfaces, and, from our experiments using calves in their growing period, that they are robust enough to account for changes in body shape and size, making them a promising tool for animal recognition during growth.

3D neural networks↗

Search for Electron Neutrinos in Multiple Topologies with the MicroBooNE Experiment

This note presents the status of the measurement of electron neutrinos from the Fermilab Booster Neutrino Beamline (BNB) with the MicroBooNE experiment. The analysis is aimed at investigating the nature of the low energy excess of electromagnetic activity observed by the MiniBooNE experiment. The $ν_e$ event selection relies on topological and calorimetric information to characterise particles produced in these interactions, leveraging the Pandora multi-algorithm reconstruction framework as well as custom particle identification and pattern recognition tools. Results presented in this note use 5.88 × 10 20 protons on target of data collected between 2015 and 2018. These include the performance of particle identification tools for $\mu/p$ and $e/\gamma$ separation, along with electromagnetic shower calibration with the largest sample of $\pi^0$ events measured on argon. Progress towards the completion of this analysis is shown through the measurement of high-energy charged-current $ν_e$ interactions and their kinematic distributions using both inclusive (1eX) and exclusive (1$e$0$p$0$\pi$ and 1$e$N$p$0$\pi$) channels. Measurements of charged-current $ν_µ$ interactions aimed at constraining flux and cross-section systematic uncertainties are also shown. We present the analysis’ preliminary sensitivity of an electron-like signal hypothesis to the MiniBooNE excess which includes flux, cross-section, and detector systematic uncertainties.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Empirical modeling for intelligent, real-time manufacture control

Artificial neural systems (ANS), also known as neural networks, are an attempt to develop computer systems that emulate the neural reasoning behavior of biological neural systems (e.g. the human brain). As such, they are loosely based on biological neural networks. The ANS consists of a series of nodes (neurons) and weighted connections (axons) that, when presented with a specific input pattern, can associate specific output patterns. It is essentially a highly complex, nonlinear, mathematical relationship or transform. These constructs have two significant properties that have proven useful to the authors in signal processing and process modeling: noise tolerance and complex pattern recognition. Specifically, the authors have developed a new network learning algorithm that has resulted in the successful application of ANS's to high speed signal processing and to developing models of highly complex processes. Two of the applications, the Weld Bead Geometry Control System and the Welding Penetration Monitoring System, are discussed in the body of this paper.

Xu, Xiaoshu↗