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DOE OSTI2023

Enhanced Hanford Low-Activity Waste Glass Property Data Development: Phase 5 and Phase 6

This report summarizes the data collected on two test matrices of low-activity waste (LAW) glass compositions intended to expand the composition-property database: Low-Activity Waste (LAW) Phase 5: Expansion of LAW Glass Composition Boundaries and LAW Phase 6: High PCT and VHT Response Glass Matrix. Both matrix glass compositions were statistically designed to expand the LAW glass composition region. The analyses performed on these glasses include chemical composition (for target compositional verification), density, viscosity, electrical conductivity, crystal fraction, container centerline cooling with crystal identification, the product consistency test (PCT) response, the vapor hydration test (VHT) response, and sulfur solubility. Because of the slightly different scope of the two matrices, not all methods were applied to both matrices. Specifically, the following measurements were taken only on the LAW Phase 5: Expansion of LAW Glass Composition Boundaries glasses: crystal fraction as a function of temperature, density (ρ), viscosity (η), and electrical conductivity (EC, e). Combined, these data contribute a significant amount, 51 glasses, to the database for high LAW loaded enhanced waste glasses. Most of these data are focused near the boundaries of acceptable PCT and VHT responses, where prediction uncertainties are most impactful.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

DOE OSTI2020

Hazard-Based Model of Activity Generation Using Vehicle Trajectory Data

Travel behavior modeling suffers from lack of longitudinal data due to the high cost of procurement and difficulty with ensuring data quality. In the recent years ubiquitous data intercepted from social media, cell detail record, GPS traces are increasingly being explored to analyze human mobility. However, these data lack key demographic information which limits their use for developing causal models of traveler behavior. The primary contribution of the paper lies in using vehicle trajectory data from Ann Arbor along with multiple other data sources for developing a hazard-based activity generation model. The different category of data used in the analysis include (i) vehicle trajectory data (VTD), (ii) American Census Survey (ACS), (iii) land use data, (iv) household travel survey (HTS) data, and (v) smart location data from Environmental Protection Agency (EPA). Home and work are identified as the two most frequently visited locations from the VTD and validated against land use categories of the region. Next a random utility-based model is developed using HTS data to identify other activity purposes as a function of the polynomials of distance from home, activity duration and departure time. The developed model is then applied to identify the non-home activity purposes in the VTD. Demographic and accessibility information are appended to the VTD from ACS and smart location databases respectively. The fmal database is then used to develop a hazard-based activity generation model. (C) 2020 The Authors. Published by Elsevier B.V.

activity generation↗

DOE OSTI2023

Experimental Observations of the Topology of Convolutional Neural Network Activations

Topological data analysis (TDA) is a branch of computational mathematics, bridging algebraic topology and data science, that provides compact, noise-robust representations of complex structures. Deep neural networks (DNNs) learn millions of parameters associated with a series of transformations defined by the model architecture resulting in high-dimensional, difficult to interpret internal representations of input data. As DNNs become more ubiquitous across multiple sectors of our society, there is increasing recognition that mathematical methods are needed to aid analysts, researchers, and practitioners in understanding and interpreting how these models' internal representations relate to the final classification. In this paper we apply cutting edge techniques from TDA with the goal of gaining insight towards interpretability of convolutional neural networks used for image classification. We use two common TDA approaches to explore several methods for modeling hidden layer activations as high-dimensional point clouds, and provide experimental evidence that these point clouds capture valuable structural information about the model's process. First, we demonstrate that a distance metric based on persistent homology can be used to quantify meaningful differences between layers and discuss these distances in the broader context of existing representational similarity metrics for neural network interpretability. Second, we show that a mapper graph can provide semantic insight as to how these models organize hierarchical class knowledge at each layer. These observations demonstrate that TDA is a useful tool to help deep learning practitioners unlock the hidden structures of their models.

topological data analysis, deep learning↗

DOE OSTI2023

Understanding Subsurface Fracture Evolution Dynamics Using Time‐Lapse Full Waveform Inversion of Continuous Active‐Source Seismic Monitoring Data

Abstract Predicting the behavior, geometry, and flow properties of subsurface fractures remains a challenging problem. Seismic models that can characterize fractures usually suffer from low spatiotemporal resolution. Here, we develop a correlative double‐difference time‐lapse full waveform inversion of continuous active source seismic monitoring data for determining high‐spatiotemporal‐resolution time‐lapse V p models of in‐situ fracture evolution at a shallow contamination site in Wyoming, USA. Assisted by rock physics modeling, we find that (a) rapidly increasing pore pressure initializes and grows the fracture, increasing the porosity slightly (from ∼13.7% to ∼14.6%) in the tight clay formation, thus decreasing V p (∼50 m/s); (b) the fluid injection continues decreasing V p , likely through the introduction of gas bubbles in the injectate; and (c) final V p reductions reach over ∼150 m/s due to a posited ∼4.5% gas saturation. Our results demonstrate that high‐resolution V p changes are indicative of mechanical and fluid changes within the fracture zone during hydrofracturing.

58 GEOSCIENCES↗

DOE OSTI2019

Enhanced Hanford Low-Activity Waste Glass Property Data Development: Phase 2

This report summarizes and analyzes the data collected on a second test matrix of 42 low-activity waste (LAW) glass compositions intended to expand the LAW glass composition region over which glass property-composition models are valid. The 42 LAW glass compositions were selected using a statistical layered experimental design approach to explore a new glass composition region that overlaps and expands beyond the previously explored LAW glass composition region. The layered design of 42 LAW glasses consisted of 21 outer-layer glasses, 15 inner-layer glasses, a center glass (three replicates), and two glasses previously tested at another laboratory. The outer-layer glass compositions include extrema based on current projections of the LAW feeds and melter operating temperatures. One of the outer-layer compositions was eliminated due to the inability to form a glass. Therefore, only 41 glasses were analyzed. The analyses performed on these glasses include chemical composition (for target compositional verification), density, viscosity, electrical conductivity, crystal fraction, canister centerline cooling with crystal identification, the Product Consistency Test, sulfur solubility, and the Vapor Hydration Test. This report discusses in depth the results obtained from this testing.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

DOE OSTI2021

Enhanced Hanford Low-Activity Waste Glass Property Data Development: Phase 4

This report summarizes and analyzes the data collected on a fourth test matrix of 25 low-activity waste glass compositions intended to expand the composition-property database and to validate the Vienna et al. (2020) property-composition models. The 25 low-activity waste glass compositions were statistically designed to be within the composition region of the 2020 models. The analyses performed on these glasses include chemical composition (for target compositional verification), density, viscosity, electrical conductivity, crystal fraction, canister centerline cooling with crystal identification, product consistency test response, vapor hydration test response, and sulfur solubility. This report discusses the results obtained from these tests.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

DOE OSTI2017

Enhanced Hanford Low-Activity Waste Glass Property Data Development: Phase 1

This report summarizes and analyzes data collected on a first test matrix of 36 low-activity waste (LAW) glass compositions intended to expand the LAW glass composition region over which glass property models are valid. The 36 LAW glass compositions were selected using statistical layered experimental design to explore a new glass composition region that overlaps and expands beyond the previously explored LAW glass composition region. The layered design of 36 LAW glasses consisted of 18 outer-layer glasses, 13 inner-layer glasses, a center glass (two replicates), and a glass previously tested at another laboratory (three replicates). The outer-layer glass compositions include extrema of the glass compositions that extend across and slightly beyond the compositions that are expected to be targeted for production. The analyses performed on these glasses include chemical composition (for target compositional verification), density, viscosity, electrical conductivity, crystal fraction, Canister Centerline Cooling with crystal identification, Product Consistency Test response, sulfur solubility, iron redox, and Vapor Hydration Test response. This report documents and discusses the results obtained from this testing.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

DOE OSTI2021

Enhanced Hanford Low-Activity Waste Glass Property Data Development: Phase 2

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

DOE OSTI2022

Replication Data for: Regeneration of Active Surface Alloys during Cyclic Oxidation and Reduction: Oxidation of H 2 on Pd/Ag(111)

The data underlying this published work have been made publicly available in this repository as part of the IMASC Data Management Plan. This work was supported as part of the Integrated Mesoscale Architectures for Sustainable Catalysis (IMASC), an Energy Frontier Research Center funded by the U.S. Department of Energy, Office of Science, Basic Energy Sciences under Award # DE-SC0012573.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2022

Enhanced descriptor identification and mechanism understanding for catalytic activity using a data-driven framework: revealing the importance of interactions between elementary steps

We report accurate identification of descriptors for catalytic activities has long been essential to the in-depth understanding of catalysis and recently to set the basis for catalyst screening. However, commonly used methods suffer from low accuracy in predictability. This study reports an enhanced approach to accurately identify the descriptors from a kinetic dataset using a machine learning (ML) surrogate model. CO hydrogenation to methanol over Cu-based catalysts was taken as a case study. Our model captures not only the contribution from individual elementary steps but also the interaction between relevant steps within a reaction network, which was found to be essential for high accuracy. As a result, six effective descriptors are identified, which are accurate enough to ensure the trained gradient boosted regression (GBR) model for good prediction of the methanol turnover frequency (TOF) over metal (M)-doped Cu(111) model surfaces (M = Au, Cu, Pd, Pt, Ni). More importantly, going beyond the purely mathematical ML model, the catalytic role of each identified descriptor can be revealed by using model-agnostic interpretation tools, which enhances the insight into the promoting effect of alloying. The trained GBR model outperforms the conventional derivative-based methods in terms of both the predictability and the mechanism understanding. It opens alternative possibilities toward accurate descriptor-based rational catalyst optimization.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2023

Toward Improved Regional Hydrological Model Performance Using State-Of-The-Science Data-Informed Soil Parameters

Accurate soil moisture and streamflow data are an aspirational need of many hydrologically relevant fields. Model simulated soil moisture and streamflow hold promise but models require validation prior to application. Calibration methods are commonly used to improve model fidelity but misrepresentation of the true dynamics remains a challenge. In this study, we leverage soil parameter estimates from the Soil Survey Geographic (SSURGO) database and the probability mapping of SSURGO (POLARIS) to improve the representation of hydrologic processes in the Weather Research and Forecasting Hydrological modeling system (WRF-Hydro) over a central California domain. Our results show WRF-Hydro soil moisture exhibits increased correlation coefficients ( r ), reduced biases, and increased Kling-Gupta Efficiencies (KGEs) across seven in situ soil moisture observing stations after updating the model's soil parameters according to POLARIS. Compared to four well-established soil moisture data sets including Soil Moisture Active Passive data and three Phase 2 North American Land Data Assimilation System land surface models, our POLARIS-adjusted WRF-Hydro simulations produce the highest mean KGE (0.69) across the seven stations. More importantly, WRF-Hydro streamflow fidelity also increases, especially in the case where the model domain is set up with SSURGO-informed total soil thickness. The magnitude and timing of peak flow events are better captured, r increases across nine United States Geological Survey stream gages, and the mean KGE across seven of the nine gages increases from 0.12 to 0.66. Our pre-calibration parameter estimate approach, which is transferable to other spatially distributed hydrological models, can substantially improve a model's performance, helping reduce calibration efforts and computational costs.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2021

Enhanced Hanford Low-Activity Waste Glass Property Data Development: Phase 2

The U.S. Department of Energy’s (DOE) Office of River Protection (ORP) requested Pacific Northwest National Laboratory (PNNL) to support the River Protection Project vitrification in an effort to support operations upon completion of startup activities (DOE 2012). This work was performed under the PNNL project titled “ORP Glass Support Work.” One task of this project—Enhanced Hanford Waste Glass Models—is the subject of this report. A previous task focused on generating property-composition data and models for the Hanford site low-activity waste (LAW) glasses with lower waste loadings, which are relevant to the commissioning of the LAW vitrification facility. The current task has the long-term objective of expanding the Hanford site LAW glass database and property composition models for the balance of the Hanford site tank waste treatment and immobilization mission. During the balance of the mission, LAW glasses with higher waste loadings will be produced. This report presents the glass compositions and glass property data developed in Phase 2 of the enhanced Hanford LAW glass property data development effort. When this effort is complete, enhanced LAW glass property models will be developed. Section 1.1 summarizes the status of the LAW glass composition regions and waste loading constraints prior to the data development effort documented in this report. Section 1.2 summarizes the LAW Phase 2 glass composition region and test matrix. Section 1.3 documents the quality assurance program used in performing the work discussed in this report.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

DOE OSTI2017

Inhibition of EBV-mediated membrane fusion by anti-gHgL antibodies

Herpesvirus entry into cells requires the coordinated action of multiple virus envelope glycoproteins, including gH, gL, and gB. For EBV, the gp42 protein assembles into complexes with gHgL heterodimers and binds HLA class II to activate gB-mediated membrane fusion with B cells. EBV tropism is dictated by gp42 levels in the virion, as it inhibits entry into epithelial cells while promoting entry into B cells. The gHgL and gB proteins are targets of neutralizing antibodies and potential candidates for subunit vaccine development, but our understanding of their neutralizing epitopes and the mechanisms of inhibition remain relatively unexplored. Here we studied the structures and mechanisms of two anti-gHgL antibodies, CL40 and CL59, that block membrane fusion with both B cells and epithelial cells. We determined the structures of the CL40 and CL59 complexes with gHgL using X-ray crystallography and EM to identify their epitope locations. CL59 binds to the C-terminal domain IV of gH, while CL40 binds to a site occupied by the gp42 receptor binding domain. CL40 binding to gHgL/gp42 complexes is not blocked by gp42 and does not interfere with gp42 binding to HLA class II, indicating that its ability to block membrane fusion with B cells represents a defect in gB activation. Furthermore, these data indicate that anti-gHgL neutralizing antibodies can block gHgL-mediated activation of gB through different surface epitopes and mechanisms.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

DOE OSTI2022

Synthetic Data and Graph Generation for Modeling Adversarial Activity (Final Project Report)

The Data and Graph Generation for Modeling Adversary Activity (MAA) project developed a methodology along with scalable graph modeling and generation tools to produce realistic large-scale background activity graphs with embedded adversarial activity pathways. The technical report presents PNNL methodology, released datasets, lessons learned, and recommendations to develop graph analytic algorithms for structure-only and attributed knowledge graphs.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2025

Active multi-mode data analysis to improve fault diagnosis in AHUs

Faults in heating, ventilation and air conditioning systems can lead to increased energy consumption, occupant comfort issues, and reduced equipment lifetime. Commercial fault detection and diagnosis (FDD) tools has been increasingly deployed in U.S. commercial buildings. While they are helping to achieve energy efficiency and operational reliability, there remain gaps in their fault diagnostic capabilities. The diagnostic results often contain multiple distinct candidate root causes (CRCs) or offer no insight into CRCs. This study developed a novel active rule-based multi-mode data analysis method to enhance diagnostic resolution by applying proven rule sets and additional new rules to data from multiple known operational modes. The proposed method was demonstrated using enhanced air handling unit performance assessment rule sets and validated with the simulated data of two air handling units. New metrics, namely, reduced number of CRCs and improvement ratio, were developed to quantify the improvement of fault diagnostic resolution. The validation results showed that the proposed method effectively reduced the number of CRCs in contrast to analyzing data solely for a single mode of operation. It achieved a median improvement ratio of 80% in 19 test cases.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

DOE OSTI2016

The value of soil respiration measurements for interpreting and modeling terrestrial carbon cycling

A recent acceleration of model-data synthesis activities has leveraged many terrestrial carbon (C) datasets, but utilization of soil respiration (RS) data has not kept pace with other types such as eddy covariance (EC) fluxes and soil C stocks. Here we argue that RS data, including non-continuous measurements from survey sampling campaigns, have unrealized value and should be utilized more extensively and creatively in data synthesis and modeling activities. We identify three major challenges in interpreting RS data, and discuss opportunities to address them. The first challenge is that when RS is compared to ecosystem respiration (RECO) measured from EC towers, it is not uncommon to find substantial mismatch, indicating one or both flux methodologies are unreliable. We argue the most likely cause of mismatch is unreliable EC data, and there is an unrecognized opportunity to utilize RS for EC quality control. The second challenge is that RS integrates belowground heterotrophic (RH) and autotrophic (RA) activity, whereas modelers generally prefer partitioned fluxes, and few models include an explicit RS output. Opportunities exist to use the total RS flux for data assimilation and model benchmarking methods rather than less-certain partitioned fluxes. Pushing for more experiments that not only partition RS but also monitor the age of RA and RH, as well as for the development of belowground RA components in models, would allow for more direct comparison between measured and modeled values. The third challenge is that soil respiration is generally measured at a very different resolution than that needed for comparison to EC or ecosystem- to global-scale models. Measuring soil fluxes with finer spatial resolution and more extensive coverage, and downscaling EC fluxes to match the scale of RS, will improve chamber and tower comparisons. Opportunities also exist to estimate RH at regional scales by implementing decomposition functional types, akin to plant functional types. We conclude by discussing the benefits that wide use of RS data will bring to model development, and database developments that will make RS data more robust, useful, and broadly available to the research community.

carbon cycle↗

DOE OSTI2014

Estrogen increases Nrf2 activity through activation of the PI3K pathway in MCF-7 breast cancer cells

The actions of the transcription factor Nuclear factor erythroid 2-related factor (Nrf2) in breast cancer have been shown to include both pro-oncogenic and anti-oncogenic activities which is influenced, at least in part, by the hormonal environment. However, direct regulation of Nrf2 by steroid hormones (estrogen and progesterone) has received only scant attention. Nrf2 is known to be regulated by its cytosolic binding protein, Kelch-like ECH-associated protein 1 (Keap1), and by a Keap1-independent mechanism involving a series of phosphorylation steps mediated by phosphatidylinositol 3-kinase (PI3K) and glycogen synthase kinase 3 beta (GSK3β). Here, we report that estrogen (E2) increases Nrf2 activity in MCF7 breast cancer cells through activation of the PI3K/GSK3β pathway. Utilizing antioxidant response element (ARE)-containing luciferase reporter constructs as read-outs for Nrf2 activity, our data indicated that E2 increased ARE activity >14-fold and enhanced the action of the Nrf2 activators, tertiary butylhydroquinone (tBHQ) and sulforaphane (Sul) 4 to 9 fold compared with cells treated with tBHQ or Sul as single agents. This activity was shown to be an estrogen receptor-mediated phenomenon and was antagonized by progesterone. In addition to its action on the reporter constructs, mRNA and protein levels of heme oxygenase 1, an endogenous target gene of Nrf2, was markedly upregulated by E2 both alone and in combination with tBHQ. Importantly, E2-induced Nrf2 activation was completely suppressed by the PI3K inhibitors LY294002 and Wortmannin while the GSK3β inhibitor CT99021 upregulated Nrf2 activity. Confirmation that E2 was, at least partly, acting through the PI3K/GSK3β pathway was indicated by our finding that E2 increased the phosphorylation status of both GSK3β and Akt, a well-characterized downstream target of PI3K. Together, these results demonstrate a novel mechanism by which E2 can regulate Nrf2 activity in estrogen receptor-positive breast cancer cells and suggest that patients' hormonal status through this activity may play a significant role in some therapeutic outcomes. - Highlights: • Estrogen (E2) increases Nrf2 activity in E2-responsive breast cancer cells. • ERα, but not ERβ is essential for E2-mediated stimulation of Nrf2 in MCF7 cells. • The PI3K/Akt/GSK3β pathway is involved in E2 stimulation of Nrf2. • E2 stimulates phosphorylation of Akt and GSK3β.

60 APPLIED LIFE SCIENCES↗

DOE OSTI2018

Utah FORGE: 2D and 3D Seismic Data

This set of data contains raw and Initially-processed 2D and 3D seismic data from the Utah FORGE study area near Roosevelt Hot Springs. Reprocessed versions of these data can be accessed at the linked submission in the Resources section titled "Reprocessed Seismic Reflection Data." The zipped archives numbered from 1-100 to 1001-1122 contain 3D seismic uncorrelated shot gatherers SEG-Y files. The zipped archives numbered from 1-100C to 1001-1122C contain 3D seismic correlated shot gatherers SEG-Y files. Other data have intuitive names.

15 GEOTHERMAL ENERGY↗