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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 163 records · Page 9
All sourcesNASA NTRSDOE OSTI
NASA NTRS2017

Using Bio-Optics to Reveal Phytoplankton Physiology from a Wirewalker Autonomous Platform

Rapid, wave-powered profiling of bio-optical properties from an autonomous Wirewalker platform provides useful insights into phytoplankton physiology, including the patterns of diel growth, phytoplankton mortality, nonphotochemical quenching of chlorophyll a fluorescence, and natural (sun-induced) fluorescence of mixed communities. Methods are proposed to quantify each of these processes. Such autonomous measurements of phytoplankton physiological rates and responses open up new possibilities for studying phytoplankton in situ, over longer periods, and under a broader range of environmental conditions.

Omand, M. M.↗
NASA NTRSDate not supplied

Machine learning based noise reduction for satellite products: application to solar-induced fluorescence retrievals using simulated and real data

In the past two decades, global satellite measurements of terrestrial chlorophyll solar-induced fluorescence (SIF) have been used widely for a number of different applications related to physiology, phenology, and productivity of plants. However, SIF retrievals are inherently noisy due to the relatively small SIF spectral signature in comparison with observational noise. In this work, we examine how a spectral-based approach that employs principal component analysis along with a relatively shallow artificial neural network can be used to reduce noise and other artifacts in satellite level 2 (L2) products. We first apply the approach in a controlled environment in which radiance spectra are simulated with a full atmospheric and surface radiative transfer model for different scenarios including various SIF values that are known. Various levels of noise can be added to the simulated spectra. Resulting noisy and noise-reduced SIF retrievals are compared with the true values to assess performance. We then apply the noise reduction approach to real SIF derived from instruments flying on meteorological satellites. The results are evaluated by comparing SIF retrievals from different platforms with each other and with other independent data sets, showing enhanced capability to capture seasonal and interannual variability in SIF.

Chlorophyll fluorescence↗
NASA NTRS2018

Radiative Transfer Modeling of Phytoplankton Fluorescence Quenching Processes

We report the first radiative transfer model that is able to simulate phytoplankton fluorescence with both photo chemical and non-photo chemical quenching included. The fluorescence source term in the inelastic radiative transfer equation is proportional to both the quantum yield and scalar irradiance at excitation wavelengths. The photo chemical and non photo chemical quenching processes change the quantum yield based on the photosynthetic active radiation. A sensitivity study was performed to demonstrate the dependence of the fluorescence signal on chlorophyll a concentration, aerosol optical depths and solar zenith angles. This work enables us to better model the phytoplankton fluorescence, which can be used in the design of new space-based sensors that can provide sufficient sensitivity to detect the phytoplankton fluorescence signal. It could also lead to more accurate remote sensing algorithms for the study of phytoplankton physiology.

Inelastic scattering↗
NASA NTRS1991

Aircraft remote sensing of phytoplankton spatial patterns during the 1989 Joint Global Ocean Flux Study (JGOFS) North Atlantic bloom experiment

Mesoscale phytoplankton chlorophyll variability near the Joint Global Ocean Flux study sites along the 20 W meridian at 34 N, 47 N, and 59 N is discussed. The NASA P-3 aircraft and the Airborne Oceanographic Lidar (AOL) system provides remote sensing support for the North Atlantic Bloom Experiment. The principal instrument of the AOL system is the blue-green laser that stimulates fluorescence from photoplankton chlorophyll, the principal photosynthetic pigment. Other instruments on the NASA P-3 aircraft include up- and down-looking spectrometers, PRT-5 for infrared measurements to determine sea surface temperature, and a system to deploy and record AXBTs to measure subsurface temperature structure.

Yoder, James A.↗
NASA NTRS1981

Laser remote sensing of marine sediment load and algal pigments: Laboratory experiments

The fluorescence emission spectra for estuarine water samples excited by an argon laser at 514.5 nm were analyzed. The features of interest were: (1) scattering at the laser wavelength by particulates (Mie); (2) fluorescence from the pigments chlorophyl a and phycoerythrin; (3) Raman scattering by water; and (4) fluorescence by dissolved organic matter. It is shown that these intensities increase with the concentration of the corresponding material and decrease with attenuation. Since the concentration of water is constant the Raman intensity provides a direct measure of attenuation.

Exton, R. J.↗
NASA NTRS1975

Multiwavelength LIDAR for remote sensing of chlorophyll A in algae and phytoplankton

A theoretical and experimental analysis of laser induced fluorescence for remote detection of chlorophyll A in living algae and phytoplankton is presented. The fluorescent properties of various species of algae representative of the different color groups are described. Laboratory measurements of fluorescent scattering cross sections is discussed and quantitive data presented. A scattering matrix model is developed to demonstrate the essential requirement of multiwavelength laser excitation in order to make accurate quantitative measurements of chlorophyll A concentration when more than one color group of algae is present in the water. A practical airborne laser fluorosensor design is considered and analysis of field data discussed. Successful operation of the Langley ALOPE (airborne LIDAR oceanographic probing experiment) system is described and field measurements presented. Accurate knowledge of alpha, the optical attenuation coefficient of the water, is shown to be essential for quantitative analysis of chlorophyll A concentration. The feasibility of remotely measuring alpha by laser radar is discussed.

Mumola, P. B.↗
NASA NTRS1995

Biological processes and optical measurements near the sea surface: Some issues relevant to remote sensing

The advent of remote sensing, the develpmemt of new optical instrumentation, and the associated advances in hydrological optics have transformed oceanography; it is now feasible to describe ocean-scale biogeochemical dynamcis from satellite observations, verified and complemented by measurements from optical sensors on profilers, moorings, and drifters. Only near-surface observations are common to both remote sensing and in situ observation, so it is critical to understand processes in the upper euphotic zone. Unfortunately, the biological principles that must be used to interpret optical variability near the sea surface are weaker than we would like, because relatively few experiments and analyses have examined bio-optical relationships under high irradiance characteristic of the upper optical depth. Special consideration of this stratum is justified, because there is good evidence that bio-optical relationships are altered near the surface; (1) the fluorescence yield from chlorophyll declines, leading to bias in the estimation of pigment from fluorometry; (2) the modeled relationship between solar-stimulated fluorecence and photosynthesis seems to deviate significantly from that presented for the lower euphotic zone; and (3) carbon-specific and cellular attenuation cross sections of phytoplankton change substantially during exposures to bright light. Even the measurement of primary productivity is problematic near the sea surface, because vertical mixing is not simulated and artifactual inhibition of photosynthesis can result. These problems can be addressed by focusing more sampling effort, experimental simulation, and analytical consideration on the upper optical depth, and by shortening timescales for the measurement of marine photosynthesis. Special efforts to study near-surface processes are justified, because new bio-optical algorithms will require quantitaitve descriptions of the responses of phytoplankton to bright light.

Cullen, John J.↗
NASA NTRS2015

Improving the Monitoring of Crop Productivity Using Spaceborne Solar-Induced Fluorescence

Large-scale monitoring of crop growth and yield has important value for forecasting food production and prices and ensuring regional food security. A newly emerging satellite retrieval, solar-induced fluorescence (SIF) of chlorophyll, provides for the first time a direct measurement related to plant photosynthetic activity (i.e. electron transport rate). Here, we provide a framework to link SIF retrievals and crop yield, accounting for stoichiometry, photosynthetic pathways, and respiration losses. We apply this framework to estimate United States crop productivity for 2007-2012, where we use the spaceborne SIF retrievals from the Global Ozone Monitoring Experiment-2 satellite, benchmarked with county-level crop yield statistics, and compare it with various traditional crop monitoring approaches. We find that a SIF-based approach accounting for photosynthetic pathways (i.e. C3 and C4 crops) provides the best measure of crop productivity among these approaches, despite the fact that SIF sensors are not yet optimized for terrestrial applications. We further show that SIF provides the ability to infer the impacts of environmental stresses on autotrophic respiration and carbon-use-efficiency, with a substantial sensitivity of both to high temperatures. These results indicate new opportunities for improved mechanistic understanding of crop yield responses to climate variability and change.

Guan, Kaiyu↗
NASA NTRS2022

A Radiative Transfer Simulator for PACE: Theory and Applications

A radiative transfer simulator was developed to compute the synthetic data of all three instruments onboard NASA’s Plankton Aerosol, Cloud, ocean Ecosystem (PACE) observatory, at the top of the atmosphere (TOA). The instrument suite includes the ocean color instrument (OCI), the HyperAngular Rainbow Polarimeter 2 (HARP2), and the Spectro-Polarimeter for Planetary Exploration 1 (SPEXone). The PACE simulator is wrapped around a monochromatic radiative transfer model based on the successive order of scattering (RTSOS), which accounts for atmosphere and ocean coupling, polarization, and gas absorption. Inelastic scattering, including Raman scattering from pure ocean water, fluorescence due to chlorophyll, and colored dissolved organic matter (CDOM), is also simulated. This PACE simulator can be used to explore the sensitivity of the hyperspectral and polarized reflectance of the Earth system with tunable atmosphere and ocean parameters, which include aerosol and cloud number concentration, refractive indices, and size distribution, ocean particle microphysical parameters, and solar and sensor-viewing geometry. The PACE simulator is used to study two important case studies. One is the impact of the significant uncertainty in pure ocean water absorption coefficient to the radiance field in the ultraviolet (UV) spectral region, which can be as much as 6%. The other is the influence of different amounts of brown carbon aerosols and CDOM on the polarized radiance field at TOA. The percentage variation of the radiance field due to CDOM is mostly for wavelengths smaller than 600 nm, while brown aerosols affect the whole spectrum from 350 to 890 nm, primarily due to covaried soot aerosols. Both case studies are important for aerosol and ocean color remote sensing and have not been previously reported in the literature.

PACE↗
NASA NTRS1985

An evaluation of 685 nm fluorescence imagery of coastal waters

To evaluate the possible application of sunlight-illuminated fluorescence at 685 nm for remote sensing of phytoplankton concentrations, an ocean-color scanner is flown on an aircraft. The results of an analysis of the scanner data, obtained from a series of test flights conducted along the Elbe River and its estuary in the North Sea, show that 685 nm fluorescence is a promising remote-sensing method. The observation of a strong correlation between the fluorescence yields and the chlorophyll concentrations determined by the absorption method which uses the reflectance ratio of blue/green channels, is discussed. The two methods are compared and it is shown that the fluorescence method has an edge over the other due to the data-processing algorithm and its applicability for surveying bio-resources in all types of water. Photographs of the chlorophyll patterns are presented.

Kim, H. H.↗
NASA NTRS2024

Noise Reduction for Solar-Induced Fluorescence Retrievals Using Machine Learning and Principal Component Analysis: Simulations and Applications to GOME-2 Satellite Retrievals

We use a spectral-based approach that employs principal component analysis along with a relatively shallow artificial neural network (NN) to substantially reduce noise and other artifacts in terrestrial chlorophyll solar-induced fluorescence (SIF) retrievals. SIF is a very small emission at red and far-red wavelengths that is difficult to measure and is highly sensitive to random errors and systematic artifacts. Our approach relies upon an assumption that a trained NN can effectively reconstruct the total SIF signal from a relatively small number of leading principal components of the satellite-observed far-red radiance spectra without using information from the trailing modes that contain most of the random errors. We test the approach with simulated reflectance spectra produced with a full atmospheric and surface radiative transfer model using different observing and geophysical parameters and various noise levels. Resulting noisy and noise-reduced retrieved SIF values are compared with true values to assess performance. We then apply our noise reduction approach to SIF derived from two different satellite spectrometers. For evaluation, since the truth in this case is unknown, we compare SIF retrievals from two independent sensors with each other. We also compare the noise-reduced SIF temporal variations with those from an independent gross primary product (GPP) product that should display similar variations. Results show that our noise reduction approach improves capture of SIF seasonal and inter-annual variability. Our approach should be applicable to many noisy data products derived from spectral measurements. Our methodology does not replace the original retrieval algorithms; rather the original noisy retrievals are needed as the target for the NN training process.

noise reduction, solar-induced fluorescence, SIF, ↗
NASA NTRS1986

Simulated laser fluorosensor signals from subsurface chlorophyll distributions

A semianalytic Monte Carlo model has been used to simulate laser fluorosensor signals returned from subsurface distributions of chlorophyll. This study assumes the only constituent of the ocean medium is the common coastal zone dinoflagellate Prorocentrum minimum. The concentration is represented by Gaussian distributions in which the location of the distribution maximum and the standard deviation are variable. Most of the qualitative features observed in the fluorescence signal for total chlorophyll concentrations up to 1.0 microg/liter can be accounted for with a simple analytic solution assuming a rectangular chlorophyll distribution function.

Venable, D. D.↗
NASA NTRS1973

Multiwavelength laser induced fluorescence of algae in-vivo - A new remote sensing technique

In order to accurately determine the quantity of chlorophyll a in living algae by fluorescence spectrometry, either remotely or in the laboratory, the fluorescence excitation cross section must be known. Laboratory fluorescence studies of a number of different algae species representative of the various color groups were performed. These measurements indicate distinct maximum spectral excitation regions which differ from one color group to another. Within each color group, however, the fluorescent properties were nearly identical, regardless of species. These two key features - namely, the similarity of fluorescent properties within a color group, and the distinct spectral differences between color groups - make possible the simultaneous determination of chlorophyll a content of an unknown mixture of phytoplankton and the distribution of chlorophyll a among the various color groups.

Mumola, P. B.↗
NASA NTRS1988

Airborne Oceanographic Lidar (AOL) flight mission participation

From February 1986 to the present, the AOL participated in six interagency flight missions. (1) Shelf Edge Exchange Processes (SEEP II) (Department of Energy). The SEEP experiments are designed to assess the assimilative capacity of the Continental Shelf to absorb the energy by-products introduced into the near-shore ocean environment from coastal communities and marine activities such as energy production plants and offshore oil operations. (2) BIOWATT II (Office of Naval Research). The major objective of this study was to provide a better understanding of the relationships between ocean physics, biology, bioluminescence, and optics in oligotrophic portions of the Atlantic Ocean. (3) Fall Experiment (FLEX) (Department of Energy). The FLEX studies were designed to determine the fate of low salinity water in the coastal boundary zone that is advected south towards the Florida coast during autumn. (4) Greenland Sea and Icelandic Marine Biological Experiments (NASA). The investigations were designed to evaluate the distribution of surface layer chlorophyll in the Greeland Sea and in the coastal waters in the vicinity of Iceland. (5) Submerged Oceanic Scattering Layer Experiment (Naval Ocean Systems Center). This flight experiment demonstrated for the first time the feasibility of detecting and metrically measuring the depth to submerged layers of particulate matter in the shelf break region and in the inner coastal zone. (6) Microbial Exchanges and Coupling in Coastal Atlantic Systems (National Science Foundation). This investigation was designed to study the transportation and fate of particulates in coastal waters and in particular the Chesapeake Bay/coastal Atlantic Ocean. Shortly after the conduct of the flight experiments, airborne laser-induced chlorophyll a and phycoerythrin fluorescence data, as well as sea surface temperature and airborne expendable bathythermograph water column temperature profiles are supplied to cooperating institutions.

Hoge, F. E.↗
NASA NTRS2002

MODIS Data from the GES DISC DAAC: Moderate-Resolution Imaging Spectroradiometer (MODIS)

The Goddard Earth Sciences (GES) Distributed Active Archive Center (DAAC) is responsible for the distribution of the Level 1 data, and the higher levels of all Ocean and Atmosphere products (Land products are distributed through the Land Processes (LP) DAAC DAAC, and the Snow and Ice products are distributed though the National Snow and Ice Data Center (NSIDC) DAAC). Ocean products include sea surface temperature (SST), concentrations of chlorophyll, pigment and coccolithophores, fluorescence, absorptions, and primary productivity. Atmosphere products include aerosols, atmospheric water vapor, clouds and cloud masks, and atmospheric profiles from 20 layers. While most MODIS data products are archived in the Hierarchical Data Format-Earth Observing System (HDF-EOS 2.7) format, the ocean binned products and primary productivity products (Level 4) are in the native HDF4 format. MODIS Level 1 and 2 data are of the Swath type and are packaged in files representing five minutes of Files for Level 3 and 4 are global products at daily, weekly, monthly or yearly resolutions. Apart from the ocean binned and Level 4 products, these are in Grid type, and the maps are in the Cylindrical Equidistant projection with rectangular grid. Terra viewing (scenes of approximately 2000 by 2330 km). MODIS data have several levels of maturity. Most products are released with a provisional level of maturity and only announced as validated after rigorous testing by the MODIS Science Teams. MODIS/Terra Level 1, and all MODIS/Terra 11 micron SST products are announced as validated. At the time of this publication, the MODIS Data Support Team (MDST) is working with the Ocean Science Team toward announcing the validated status of the remainder of MODIS/Terra Ocean products. MODIS/Aqua Level 1 and cloud mask products are released with provisional maturity.

Source record↗
NASA NTRS2024

Contributions of David Mauzerall to Photosynthesis Research - Celebrating His 95th Birthday

We honor here Professor David Mauzerall, a pioneer in the fields of photochemistry and photobiology of porphyrins and chlorophylls in vitro and in vivo, on the occasion of his 95th birthday. Throughout his career at The Rockefeller University, he refined our understanding of how chlorophyll converts light energy into chemical energy. He exploited top-of-the-line laser technology in developing photoacoustics and a variety of other innovative experimental approaches. His experimental work and conceptual insights contributed greatly to our understanding of photosynthesis and the possible role of photosynthesis in the origin of life. His contributions include many landmark single-authored and collaborative papers, and his legacy includes the training of others who have become authorities themselves. After providing a brief description of his research accomplishments, we include tributes from several of his coworkers and his daughters highlighting their valuable experiences with David Mauzerall on this milestone birthday.

chlorophyll↗
NASA NTRS2005

Use of a Novel Rover-mounted Fluorescence Imager and Fluorescent Probes to Detect Biological Material in the Atacama Desert in Daylight

We have developed an imaging system, the Fluorescence Imager (FI), for detecting fluorescence signals from sparse microorganisms and biofilms during autonomous rover exploration. The fluorescence signals arise both from naturally occurring chromophores, such as chlorophyll of cyanobacteria and lichens, and from fluorescent probes applied to soil and rocks. Daylight imaging has been accomplished by a novel use of a high-powered flashlamp synchronized to a CCD camera. The fluorescent probes are cell permanent stains that have extremely low intrinsic fluorescence (quantum yields less than 0.01) and a large fluorescence enhancement (quantum yields greater than 0.4) when bound to the target. Each probe specifically targets either carbohydrates, proteins, nucleic acids or membrane lipids, the four classes of macromolecules found in terrestrial life. The intent of the probes is to interrogate the environment for surface and endolithic life forms.

Weinstein, S.↗