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At least 163 records · Page 9

Summer temperatures during the last glaciation (MIS 5c to MIS 3) inferred from a 50,000-year chironomid record from Füramoos, southern Germany

There is a sparsity of long, continuous palaeotemperature records for the last glacial period in central Europe, particularly for the interval corresponding to Marine Isotope Stages (MIS) 4 and 3. Here we present a new, ca. 50-thousand year (ka)-long chironomid record from Füramoos, southern Germany, covering the interval from MIS 5a to MIS 3 that we use to examine lake development and then to quantitatively reconstruct mean July air temperatures. Chironomid assemblages with high abundances of taxa such as Polypedilum nubeculosum-type, Microtendipes pedellus-type, Cladopelma lateralis-type and Dicrotendipes nervosus-type imply a shallow-lake setting for the majority of the examined interval, which is corroborated by other aquatic remains such as oribatid mites, Sialidae and Ceratopogonidae. Assemblages from the interval ca. 99 to 80 ka (in the region corresponding to the Brörup Interstadial, Stadial B and early Odderade Interstadial) are dominated by taxa such as Tanytarsus glabrescens-type and Tanytarsus mendax-type and indicate relatively warm temperatures. Assemblages from the interval covering ca. 80 to 54 ka (corresponding to the late Odderade, Stadial C, Dürnten Interstadial and Stadial D) are dominated by taxa such as Sergentia coracina-type and Tanytarsus lugens-type and are typical for cooler conditions. Reconstructed July temperatures for the early Würmian (Brörup to early Odderade; ca. 99–80 ka) are 13–14 °C. Values decline to <10 °C during the late Odderade and Stadial C (ca. 80–77 ka) around the MIS 5a/4 transition. This decrease is coeval with a pronounced decrease in Northern Hemisphere summer insolation. Values stay in the range of 9–11 °C during the Dürnten and Stadial D (ca. 54–74.5 ka) and increase again to 12.5 °C during the Bellamont 1 interstadial (ca. 54–46 ka). Reconstructed July temperatures track changes in arboreal pollen percentages at Füramoos and agree with a summer-temperature decrease during the early to mid-Würmian as reported by other palaeotemperature records from Europe and the North Atlantic. Our chironomid record from Füramoos provides valuable new insights into Würmian climate dynamics in Central Europe, and corroborates other temperature reconstructions from the early to mid-Würmian glacial period.

Chironomids↗

Interannual Variability of Aerosols and CO in the Upper Troposphere/Lower Stratosphere (UTLS): Connection to the Climate Variability, Asian Summer Monsoon Strengths, and Emissions

We present our study of decadal variations of UTLS aerosol composition in terms of their sources and convective transport mechanisms associated with the Asian summer monsoon. We use the NASA global model GEOS that incorporates emissions from anthropogenic, biomass burning, volcanic, and other natural sources to simulate the aerosols and related gases, and satellite observations of aerosols and CO in the UTLS from 2010-2020 to investigate (1) the interannual variability of aerosol composition in the UTLS, (2) such variability in relationship to the ENSO and Asian summer monsoon strengths, and (3) the connections of UTLS aerosol with the anthropogenic and natural emissions.

decadal variations↗

Improving Abundance Estimates of Spring–Summer Snake River Chinook Salmon for Fisheries Management

Abstract The Columbia River basin is home to a run of spring–summer Chinook Salmon Oncorhynchus tshawytscha that returns to the Snake River drainage of Idaho, Oregon, and Washington in the Pacific Northwest. Historically, the run was one of the more productive throughout the Columbia River basin. However, Snake River spring–summer Chinook Salmon have experienced declines in abundance due to overfishing, habitat degradation, and dams. Several stocks are listed as threatened under the U.S. Endangered Species Act and are supported by mitigation hatcheries funded by Idaho Power Company, the Lower Snake River Compensation Plan, and the Bonneville Power Administration. To maximize tribal and state harvest of returning hatchery adults, minimize impacts on wild fish, and ensure that enough hatchery fish return to meet broodstock needs, careful fisheries management is required. Since 2008, managers have used hatchery adults, PIT-tagged as juveniles and detected at Lower Granite Dam, to generate adult abundance estimates. In season, these estimates inform state and tribal harvest shares and ensure that broodstock needs are met. Postseason, they provide smolt-to-adult survival and return rates. Since 2012, parentage-based tagging (PBT) has provided an alternative method to estimate stock- and age-specific returns at Lower Granite Dam, since returning hatchery adults sampled at Lower Granite Dam can be assigned to their parents. We compared stock-specific abundance estimates between PIT- and PBT-derived methodologies for return years 2016–2019. Across all years, PIT tag estimates accounted for 65% of the PBT-based estimates at Lower Granite Dam across all age-groups and release sites combined. This underrepresentation across all groups equated to 49,833 fish that were not accounted for in PIT tag abundance estimates. It is clear that PBT-based estimates should aide in-season harvest management and postseason run reconstruction to avoid the known bias of estimates from PIT tags, especially during years of low returns when increased accuracy is critical.

Coykendall, D. Katharine (ORCID:0000000211482397)↗

Predictability of the early summer surface air temperature over Western South Asia

Variability of the Surface Air Temperature (SAT) over the Western South Asia (WSA) region leads to frequent heatwaves during the early summer (May-June) season. The present study uses the European Centre for Medium-Range Weather Forecast’s fifth-generation seasonal prediction system, SEAS5, from 1981 to 2022 based on April initial conditions (1-month lead) to assess the SAT predictability during early summer season. The goal is to evaluate the SEAS5’s ability to predict the El Niño-Southern Oscillation (ENSO) related interannual variability and predictability of the SAT over WSA, which is mediated through upper-level (200-hPa) geopotential height anomalies. This teleconnection leads to anomalously warm surface conditions over the region during the negative ENSO phase, as observed in the reanalysis and SEAS5. We evaluate SEAS5 prediction skill against two observations and three reanalyses datasets. The SEAS5 SAT prediction skill is higher with high spatial resolution observations and reanalysis datasets compared to the ones with low-resolution. Overall, SEAS5 shows reasonable skill in predicting SAT and its variability over the WSA region. Moreover, the predictability of SAT during La Niña is comparable to El Niño years over the WSA region.

54 ENVIRONMENTAL SCIENCES↗

Hydroclimate-coupled framework for assessing power system resilience under summer drought and climate change

Extreme drought, exacerbated by climate change, increasingly threatens power system resilience, and a systematic assessment of such impacts is challenging due to the unpredictability of drought and their associated modeling complexity. Here, to address the challenge, this research develops a hydroclimate-coupled power system resilience assessment framework that enables systematic modeling of drought and climate change impacts on generation, transmission, and demand sectors. Applying the framework to the 2025 Eastern U.S. power grid — comprising 6,055 at-risk generators — under climate-induced summer drought scenarios (including SSP126, SSP245, SSP370, and SSP585) from 2023 to 2100, the study finds that climate-induced droughts could jeopardize the power system’s reliability to a greater extent than historical events, potentially leading to widespread load shedding. More specifically, the study reveals that under the twenty-one representative drought scenarios, the loss of load expectation (LOLE) of the grid could range from 34.77 to 91.48 days per summer. The simulations indicate that implementing resilience enhancement strategies is crucial to ensure reliable system operation, which encompasses initiatives such as demand response, upgrading open cooling systems, and transmission expansion. In all, these findings underscore the urgent need for proactive planning and investment in resilient U.S. power systems to mitigate the impacts of extreme drought events.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Comparing the cooling effectiveness of operationalisable urban surface combination scenarios for summer heat mitigation

Extreme summer heat in cities exacerbates the vulnerability of urban communities to heatwaves. Vegetative and reflective urban surfaces can help reduce urban heat. This study investigated the impacts of urban trees, green roofs and cool roofs on heat mitigation during average and extreme summer conditions in temperate oceanic Melbourne, Australia. We simulated the city climate using ‘The Air Pollution Model’ (TAPM) at a 1 km spatial resolution over 10 years, which according to our review of the literature, was the most prolonged period for simulation in Melbourne. During a widespread heatwave event, some of the tested scenarios with combined surface parameters could reduce the extreme values of the energy budget components- sensible heat, latent heat, and storage heat fluxes up to seasonal averages compared to the existing situation for Melbourne (control). The scenario with the highest (reasonable maximum) ground-level vegetation, green roofs, and cool roofs could reduce air temperatures up to 2.4 °C. The simulations suggest that a combined strategy with vegetative and high-albedo surfaces will deliver higher effectiveness with maximum cooling benefits and cost-effectiveness than individual strategies in cities. These results suggest the importance of collaborative strategic planning of urban surfaces to make cities healthier, sustainable, and liveable.

54 ENVIRONMENTAL SCIENCES↗

Compounding effects of Lake and urbanization on summer precipitation in the Greater Chicago area

Here, this study explores the impacts of Lake Michigan and Chicago's urbanization on precipitation patterns over the Greater Chicago Area, using 22 years of observational data and Weather Research and Forecasting (WRF) model simulations focused on an early summer rain event. Observational analysis reveals that urban areas consistently experience more precipitation than the adjacent southern Lake Michigan region throughout the year, particularly before 2015. However, this disparity has narrowed since 2016 due to a more rapid increase in heavy precipitation over the lake compared to urban areas. Specifically, lake precipitation has risen by 25 mm per year, compared to 15 mm per year over urban areas. Additionally, the number of days with precipitation exceeding 5 mm per day has been rising at a rate of 1.34 days per year over the lake and 0.84 days per year over urban areas. Modeling experiments reveal that both urbanization and lake effects, including lake breezes, enhance precipitation over urban areas, primarily through convergence induced by interactions between land and lake breezes. In contrast, these same factors suppress precipitation over the lake. The suppression results from Lake Michigan's stable environment, characterized by cooler surface temperatures, limited evaporation in early summer, and a high-pressure anomaly over the lake driven by urban heating, which creates upward motion over urban areas and downward motion over the lake, further influencing precipitation patterns.

Coastal urban↗

Sources and Composition of Organic Aerosols in the Central Arctic during Spring and Summer

Organic aerosols (OA) are a major component of Arctic aerosol mass and influence the region’s radiation budget, yet their sources and physicochemical properties remain largely unknown. We investigate OA sources and climate-relevant characteristics over the central Arctic Ocean in spring and summer, by applying positive matrix factorization to aerosol mass spectrometry data from two ship-based expeditions (2018 and 2020), complemented by total and interstitial aerosol measurements during fog periods. Six distinct OA factors were identified: haze-related OA, Arctic oxygenated OA, two mixed-OA types resembling biomass burning and primary marine OA linked to warm-air intrusions, marine OA, and hydrocarbon-related OA. Seasonal transitions strongly shaped OA composition. Following polar sunrise, highly oxygenated OA, likely formed secondarily from photo-oxidized volatile organic compounds, became dominant. After the polar vortex collapsed in May, episodic spikes in marine OA from the marginal ice zone appeared, alongside a reduced influence from Eurasian anthropogenic sources. These transitions influenced OA oxidation state and related properties including volatility, acidity, and hygroscopicity, highlighting the role of the Arctic spring atmosphere as an active photochemical reactor. Overall, OA was highly oxidized, with particles activated in fog during summer showing even greater oxidation, suggesting that central Arctic OA can be highly cloud active.

Arctic haze↗

The Mechanism of Increasing Summer Water Vapor Over the Tibetan Plateau

Rapid warming over the Tibetan Plateau (TP) has been associated with a wetting trend in atmospheric water vapor content, which is critical for recharging the Asian water tower. However, the mechanism associated with the wetting phenomenon remains unclear. Long-term changes in moisture balance and precipitation recycling processes are investigated using the ERA5 reanalysis from 1979 to 2019. The wetting trend over TP is mainly due to the summer water vapor trend with signi?cantly increases over the western TP. Based on the moisture balance analysis, it is found that precipitation, evaporation, and the convergence of moisture are all increasing over the western TP but decreasing over the eastern TP. Based on the dynamical precipitation recycling model, the results suggest that both internal and external cycles contributes to the wetting over TP, with 63.87% and 36.13% contributions respectively. Further analysis found that the atmospheric heating source is also increasing over the western TP, which could shift the moisture transportation from east to west at the southern boundary of TP. The increasing moisture convergence could enhance precipitation, and the enhanced latent heating in the mid-atmosphere can further induced moisture convergence, which forms a positive feedback. However, an opposite situation occurred over the eastern TP. The internal and external cycle of the recycling process can stimulate (suppress) each other through precipitation over the western (eastern) TP. This mechanism linked the changes in the precipitation recycling and atmospheric circulation, and induced the wetting trend over TP in summer.

54 ENVIRONMENTAL SCIENCES↗

Dairy Methane Emissions in California's San Joaquin Valley Inferred With Ground‐Based Remote Sensing Observations in the Summer and Winter

Abstract The dairy industry in the San Joaquin Valley (SJV) is one of California’s largest methane (CH 4 ) sources. Reducing dairy emissions is a priority for the state’s climate change plans. Observations of current dairy CH 4 emissions are key to monitoring actions taken toward this goal. To help support this, we present new ground‐based measurements of atmospheric column‐averaged CH 4 mixing ratio (XCH 4 ) gradients across a group of 600 dairies in the central SJV using EM27/SUN solar spectrometers. We used measurements from the 2019 summer and 2020 winter seasons for a top‐down emission inversion based on the WRF‐STILT model. Our top‐down estimates of the region’s dairy emissions range from 90% to 183% of the current CALGEM inventory’s emissions of 277 Gg/yr. In contrast to the strong temperature dependence found by earlier dairy CH 4 emission studies, we also find that our top‐down emissions during the winter measurement days are comparable to the summer measurement days, possibly due to seasonal changes in dairy management practices and meteorological conditions. Furthermore, we find significant interday variability in our measurements and find that our emission estimates overlap with earlier top‐down studies and bottom‐up inventories in this region. Our study demonstrates how analysis of ground‐based remotely sensed CH 4 gradient observations can help improve our understanding of CH 4 sources at scales relevant to mitigation policy. It also reflects the need for long‐term monitoring of CH 4 emissions in the region and at individual facilities to better understand their emissions.

54 ENVIRONMENTAL SCIENCES↗

Asian-Australian summer monsoons linkage to ENSO strengthened by global warming

The El Niño-Southern Oscillation (ENSO) used to affect the Asian summer monsoon (ASM) and Australian summer monsoon (AusSM) precipitation in different ways but global warming may have changed it. This study built robust annual ASM (AusSM) precipitation reconstructions during 1588–2013 (1588–1999) to examine the ENSO-monsoon relationship and how it has changed. During the period of 1588–1850 when natural climate variability was dominant, the ENSO-monsoon and inter-monsoon relationship was weak and non-stationary. Since 1850, however, both the inter-monsoon and ENSO-monsoon relationships saw an enhancement and this trend has been persistent to the present day, suggesting the influence of anthropogenic climate warming. Further analysis of climate model projections found that global warming can strengthen the ENSO-monsoon association that, subsequently, acts to synchronize the ASM and AusSM variations.

54 ENVIRONMENTAL SCIENCES↗

The Italian Summer Students Program at Fermilab and other US Laboratories: 40 years of education in particle physics and technology

Since 1983 the Italian groups collaborating with Fermilab (US) have been running a 2-month summer training program for Master students. While in the first year the program involved only 4 physics students, in the following years it was extended to engineering students. Many students have extended their collaboration with Fermilab with their Master Thesis and PhD. The program has involved more than 600 Italian students from more than 20 Italian universities. Each intern is supervised by a Fermilab Mentor responsible for the training program. Training programs spanned from Tevatron, CMS, Muon (g-2), Mu2e and SBN (MicroBooNE, Icarus, and SBND) and DUNE design and data analysis, development of particle detectors, design of electronic and accelerator components, development of infrastructures and software for tera-data handling, quantum computing and research on superconductive elements and accelerating cavities. In 2015 the University of Pisa included the program within its own educational programs. Summer Students are enrolled at the University of Pisa for the duration of the internship and at the end of the internship they write summary reports on their achievements. After positive evaluation by a University of Pisa Examining Board, interns are acknowledged 6 ECTS credits for their Diploma Supplement. The program was paused in 2020 and 2021 due to the COVID-19 pandemic, but it resumed in 2022. From 2022 to 2024, a total of 60 students participated in the nine-week training at Fermilab. We are currently organizing the 2025 program. This paper provides an overview of the program, which can serve as a model for other interested laboratories.

Barzi, Emanuela [Ohio State U.]↗

Nitrogen availability and summer drought, but not N:P imbalance, drive carbon use efficiency of a Mediterranean tree-grass ecosystem

All ecosystems contain both sources and sinks for atmospheric carbon (C). A change in their balance of net and gross ecosystem carbon uptake, ecosystem-scale carbon use efficiency (CUE ECO ), is a change in their ability to buffer climate change. However, anthropogenic nitrogen (N) deposition is increasing N availability, potentially shifting terrestrial ecosystem stoichiometry towards phosphorus (P) limitation. Depending on how gross primary production (GPP, plants alone) and ecosystem respiration (R ECO , plants and heterotrophs) are limited by N, P or associated changes in other biogeochemical cycles, CUE ECO may change. Seasonally, CUE ECO also varies as the multiple processes that control GPP and respiration and their limitations shift in time. We worked in a Mediterranean tree-grass ecosystem (locally called ‘dehesa’) characterized by mild, wet winters and summer droughts. We examined CUE ECO from eddy covariance fluxes over 6 years under control, +N and + NP fertilized treatments on three timescales: annual, seasonal (determined by vegetation phenological phases) and 14-day aggregations. Finer aggregation allowed consideration of responses to specific patterns in vegetation activity and meteorological conditions. We predicted that CUE ECO should be increased by wetter conditions, and successively by N and NP fertilization. Milder and wetter years with proportionally longer growing seasons increased CUE ECO , as did N fertilization, regardless of whether P was added. Using a generalized additive model, whole ecosystem phenological status and water deficit indicators, which both varied with treatment, were the main determinants of 14-day differences in CUE ECO . The direction of water effects depended on the timescale considered and occurred alongside treatment-dependent water depletion. Overall, future regional trends of longer dry summers may push these systems towards lower CUE ECO .

59 BASIC BIOLOGICAL SCIENCES↗

Influence of Spatial Dipole Pattern in Asian Aerosol Changes on East Asian Summer Monsoon

Since China implemented the Air Pollution Prevention and Control Action Plan in 2013, the aerosol emissions in East Asia have been greatly reduced, while emissions in South Asia have continued to increase. This has led to a dipole pattern of aerosol emissions between South Asia and East Asia. We report the East Asian summer monsoon (EASM) responses to the dipole changes in aerosol emissions during 2013–17 are investigated using the atmosphere model of Community Earth System Model version 2 (CESM2). We show that decreases in East Asian emissions alone lead to a positive aerosol effective radiative forcing (ERF) of 1.59 (±0.97) W m -2 over central-eastern China (25°–40°N, 105°–122.5°E), along with a 0.09 (±0.07)°C warming in summer during 2013–17. The warming intensified the land–sea thermal contrast and increased the rainfall by 0.32 (±0.16) mm day -1 . When considering both the emission reductions in East Asia and increases in South Asia, the ERF is increased to 3.39 (±0.89) W m -2 , along with an enhanced warming of 0.20 (±0.08)°C over central-eastern China, while the rainfall insignificant decreased by 0.07 (±0.16) mm day -1 . It is due to the westward shift of the strengthened western Pacific subtropical high, linked to the increase in black carbon in South Asia. Based on multiple EASM indices, the reductions in aerosol emissions from East Asia alone increased the EASM strength by almost 5%. Considering the effect of the westward shift of WPSH, the dipole changes in emissions together increased the EASM by 5%–15% during 2013–17, revealing an important role of South Asian aerosols in changing the East Asian climate.

54 ENVIRONMENTAL SCIENCES↗

Influence of Spatial Dipole Pattern in Asian Aerosol Changes on East Asian Summer Monsoon

Since China implemented the Air Pollution Prevention and Control Action Plan in 2013, the aerosol emissions in East Asia have been greatly reduced, while emissions in South Asia have continued to increase. This has led to a dipole pattern of aerosol emissions between South Asia and East Asia. Here, the East Asian summer monsoon (EASM) responses to the dipole changes in aerosol emissions during 2013–17 are investigated using the atmosphere model of Community Earth System Model version 2 (CESM2). We show that decreases in East Asian emissions alone lead to a positive aerosol effective radiative forcing (ERF) of 1.59 (±0.97) W m -2 over central-eastern China (25°–40°N, 105°–122.5°E), along with a 0.09 (±0.07)°C warming in summer during 2013–17. The warming intensified the land–sea thermal contrast and increased the rainfall by 0.32 (±0.16) mm day -1 . When considering both the emission reductions in East Asia and increases in South Asia, the ERF is increased to 3.39 (±0.89) W m -2 , along with an enhanced warming of 0.20 (±0.08)°C over central-eastern China, while the rainfall insignificant decreased by 0.07 (±0.16) mm day -1 . It is due to the westward shift of the strengthened western Pacific subtropical high, linked to the increase in black carbon in South Asia. Based on multiple EASM indices, the reductions in aerosol emissions from East Asia alone increased the EASM strength by almost 5%. Finally, considering the effect of the westward shift of WPSH, the dipole changes in emissions together increased the EASM by 5%–15% during 2013–17, revealing an important role of South Asian aerosols in changing the East Asian climate.

54 ENVIRONMENTAL SCIENCES↗

Data from: "Warming and the dependence of limber pine (Pinus flexilis) establishment on summer soil moisture within and above its current elevation range"

This data package contains data that were used for analysis in “Warming and the dependence of limber pine (Pinus flexilis) establishment on summer soil moisture within and above its current elevation range”, by Moyes et al. 2013. All data collection and field research were completed on Niwot Ridge, Colorado, USA.This data package contains nine comma-separated-values (.csv) files, one text (.txt) file, and two zipped seedling folders that were used for leaf area analysis. One zipped folder contains 468 .jpg photographs of seedlings, and the second contains 468 corresponding Image J-processed .jpg images that include silhouette leaf area values. .csv and .txt files can be opened using any compatible simple text-editor software such as TextEdit (Mac) and Notepad (Windows); .csv’s can also be opened using R and Microsoft Excel. Image files can be opened using Preview (Mac) and Photos (Windows). In addition, there are a total of 31 Microsoft Excel files: three .xlsx files, and 28 raw Li-Cor output .xls files. This data user’s guide is available in .pdf format, and can be opened using Adobe Acrobat Reader, or any other compatible file viewing software. Geospatial data showing field site locations are also included in the archive for use and reference. There are two geospatial formats in this archive: ESRI shapefiles (.shp) and keyhole markup-language (.kml) files. Both file types contain bounding box information, with the former being polygons, and the latter containing corner coordinates for each site. ESRI shapefiles can be opened using any geospatial software compatible with the file type (such as ESRI’s ArcGIS suite and QGIS), and .kml files are compatible with Google Earth and Google Maps.--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Continued changes in climate are projected to alter the geographic distributions of plant species, in part by affecting where individuals can establish from seed. We tested the hypothesis that warming promotes uphill redistribution of subalpine tree populations by reducing cold limitation at high elevation and enhancing drought stress at low elevation. We seeded limber pine (Pinus flexilis) into plots with combinations of infrared heating and water addition treatments, at sites positioned in lower subalpine forest, the treeline ecotone, and alpine tundra. In 2010, first-year seedlings were assessed for physiological performance and survival over the snow-free growing season. Seedlings emerged in midsummer, about 5–8 weeks after snowmelt. Low temperature was not observed to limit seedling photosynthesis or respiration between emergence and October, and thus experimental warming did not appear to reduce cold limitation at high elevation. Instead, gas exchange and water potential from all sites indicated a prevailing effect of summer moisture stress on photosynthesis and carbon balance. Infrared heaters raised soil growing degree days (base 5 °C, p < 0.001) and August–September mean soil temperature (p < 0.001). Despite marked differences in vegetation cover and meteorological conditions across sites, volumetric soil moisture content (θ) at 5–10 cm below 0.16 and 0.08 m^3 m^(−3) consistently corresponded with moderate and severe indications of drought stress in midday stem water potential, stomatal conductance, photosynthesis, and respiration. Seedling survival was greater in watered plots than in heated plots (p = 0.01), and negatively related to soil growing degree days and duration of exposure to θ < 0.08 m^3 m^(−3) in a stepwise linear regression model (p < 0.0001). We concluded that seasonal moisture stress and high soil surface temperature imposed a strong limitation to limber pine seedling establishment across a broad elevation gradient, including at treeline, and that these limitations are likely to be enhanced by further climate warming.--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Maintenance log:Amended file name error in Data User's Guide May 19 2022

54 ENVIRONMENTAL SCIENCES↗

Metagenome-assembled genomes from topsoils along a hillslope water gradient across early snowmelt to late summer in East River, CO

Drought is changing the American Mountain West at unprecedented rates with unknown consequences to soil microbiome composition and function. As a part of LBNL Watershed Science Focus Area (SFA), we investigated shifts in microbial community and transcriptional activity on a subalpine conifer-meadow transition zone throughout the summer of 2023 as soil dried down. This work took place in Crested Butte, CO on Snodgrass mountain, using a proxy for drought conditions.Here we present metagenome assembled genomes (MAGs) for the bacterial and archaeal community at 0-10cm from three sites along a hillslope water gradient across five timepoints from early snowmelt to late summer. 42 metagenomes were sequenced at Joint Genome Institute (JGI) and can be found under the JGI GOLD (Genomes Online Database) sequencing project Gs0166660. Metagenomes were assembled through an inhouse pipeline (see methods), binned using four autobinners (concoct, maxbin2, metabat2, and vamb) and consolidated using dastool. The consolidated bins from all metagenomes were pooled, filtered by completeness (>70%) and contamination (<10%), and dereplicated at 95% ANI using drep. This dataset (1) a zip file of 157 MAGs (as fasta files, Gs0166660_bins_tar.gz), (2) sample metadata file with sample IGSNs (International Generic Sample Numbers) (samples.csv), (3) bounding box coordinates for the sampled locations (Gs0166660.kml), (4) metagenome assembly and coassembly metadata file listing IMG/M (Integrated Microbial Genomes/Metagenomes) metagenome accessions linking samples to metagenomes (EastRiver_Drought_ESSDive_Metadata.csv), (5) location metadata file (locations.csv), (6) file-level metadata file (flmd.csv) and (7) data dictionary (dd.csv) file.This work was supported by the Watershed Function Science Focus Area at Lawrence Berkeley National Laboratory funded by the US Department of Energy, Office of Science, Biological and Environmental Research under Contract No. DE-AC02-05CH11231.

54 ENVIRONMENTAL SCIENCES↗

Processed sap flow and fine-root trait data associated with summer drought responses in temperate trees in Lisle, Illinois, USA (2019–2021)

These data support the manuscript “Acquisitive root exploration strategies help maintain higher peak sap flux rates during summer drought, but more root biomass does not”. The dataset includes processed sap flow measurements and fine-root trait data collected between 2019 and 2021 from temperate monodominant tree plots established in the 1920s to 1930s ranging in size from 0.05 to 0.8 ha at The Morton Arboretum in Lisle, IL. Sap flow was measured with ICT sap flow sensors using the heat ratio method. Fine-root traits were measured from soil cores which includes specific root length (SRL), specific root area (SRA), diameter, biomass, and length for diameter classes ≤1 mm and ≤2 mm. The package contains comma separated value (CSV) data files and associated metadata that can be viewed and analyzed using common software such as spreadsheet programs, R, and Python. These data are used to investigate how variation in fine-root traits relate to tree water use and drought response during summer drought linking belowground root traits and aboveground physiological responses.

drought↗