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At least 1,675 records · Page 93

Spin-Controllable Dynamics in Defect-Engineered Carbon Nanotubes as Single Photon Emitters: Data-Driven Modeling and Computations

Quantum technologies, such as quantum computing and sensing, require efficient single-photon emission (SPE) sources that operate at room temperature in telecom wavelengths. While several materials can serve as SPE sources, no single platform meets all the criteria for efficiency, ambient operation, and scalability. Single-walled carbon nanotubes (SWCNTs) with covalently attached molecules offer a promising solution. Their SPE can be easily tuned via modifications of the SWCNT's diameter, chirality, and bonded molecules, enabling emission across near-IR to telecom wavelengths at ambient conditions. However, to fully realize the potential of SWCNTs and unlock their quantum capabilities, a deeper understanding of how structural defects from molecular adducts affect their emission and competing photoexcited processes is essential. To address this gap in our knowledge, this project combined quantum chemistry calculations with data-driven methods of cheminformatics (QSAR) and machine learning (ML). The developed computational approaches have provided several design strategies for covalent functionalization of SWCNTs to improve their optical response. The collaboration with Los Alamos National Lab (LANL) enabled direct comparison of computational and experimental data, facilitating method validation. This partnership was enhanced through access to LANL's Center for Integrated Nanotechnologies (CINT) utilizing User Facility Program and summer internships, which provided three NDSU graduate students with hands-on experience at LANL. The outcomes of this project included (1) Advancing the current stage of computational methods in accurate modeling of non-adiabatic spin-dependent photoexcited dynamics and its applicability to nanosystems consisting of thousands of atoms, realized as open-access codes linked to existing DFT-based software; (2) Establishing the relationship between the structure of adducts and SWCNTs and intrinsic excitonic and spin properties of defect states for guiding novel synthetic strategies and experimental probes of chemically functionalized SWCNTs as near-IR emitting materials; (3) Generating virtual libraries of hypothetical functionalized SWCNTs for virtual screening of their chemical structures and optical properties, leveraging new functionalities of SWCNTs; (4) Offering a unique experience for NDSU graduate students that prepared them for future scientific careers related to materials modeling and big data processing. These results were summarized in 12 published journal papers and 3 recently submitted papers. One of a key finding is that the position of defect sites on the SWCNT surface primarily drives the emission redshift (up to 100 meV), while the polarity of the defect-inducing molecules has a much smaller effect (~10 meV). However, the electron-donating or withdrawing properties of a molecule influence selecting reactivity of defect sites. These insights important for optimizing synthetic protocols for desired emissions in SWCNTs. We also revealed that the interaction between two defects at various positions on the SWCNT enhances the redshift and optical activity of states, favoring strong near-IR emission. This suggests that manipulations in defect concentrations is a promising strategy for controlling efficient emission. Mostly important, the defect position was found controllable by the spin states of photoexcited intermediates: Excited aromatic molecules form ortho defects with SWCNTs at their singlet states in the presence of oxygen, while oxygen-free conditions favor para defects via the triplet-state mechanism. Additionally, a heat-activated [2+2] cycloaddition reaction facilitates divalent defect formation with fewer bonding positions that narrows emission bands. These groundbreaking findings have been experimentally validated and significantly advance our understanding of defect chemistry in SWCNTs. Using a novel encoding technique and 3D-MoRSE descriptors, we developed highly accurate ML/QSAR models to predict both the 3D structure and optical properties of SWCNTs with chemical defects. This model enabled the creation of a virtual library of 125,556 structures, providing new insights into the relationship between SWCNT-defect structure and emission.

77 NANOSCIENCE AND NANOTECHNOLOGY↗

Optimal Transport as a Tool for Scientific Discovery in Radiation Biology

This report summarizes findings from research conducted for the “Exploration of the Poten tial for Artificial Intelligence and Machine Learning to Advance Low-Dose Radiation Biology Re search” (RadBio-AI) program, supported by the U.S. Department of Energy, Office of Science, Office of Biological and Environmental Research, under Awards KP1601011/FWP CC121 and KP1601017/FWP CC121. The research reported here was undertaken in an effort to assess the potential of optimal measure transport methods as components within the larger scope of a com putational framework envisioned to support research in the radiation biology domain. Within this effort, our interest centered on enabling a unified generic framework where probabilistic modeling, inference, and statistical learning can be carried out for a wide range of data distributions. As described next in Section 1 (and in more detail in our original publication), optimal measure transport offers the possibility of such unified approach.

97 MATHEMATICS AND COMPUTING↗

Multi-Temporal Predictive Modelling of Sorghum Biomass Using UAV-Based Hyperspectral and LiDAR Data

High-throughput phenotyping using high spatial, spectral, and temporal resolution remote sensing (RS) data has become a critical part of the plant breeding chain focused on reducing the time and cost of the selection process for the “best” genotypes with respect to the trait(s) of interest. In this paper, the potential of accurate and reliable sorghum biomass prediction using visible and near infrared (VNIR) and short-wave infrared (SWIR) hyperspectral data as well as light detection and ranging (LiDAR) data acquired by sensors mounted on UAV platforms is investigated. Predictive models are developed using classical regression-based machine learning methods for nine experiments conducted during the 2017 and 2018 growing seasons at the Agronomy Center for Research and Education (ACRE) at Purdue University, Indiana, USA. The impact of the regression method, data source, timing of RS and field-based biomass reference data acquisition, and the number of samples on the prediction results are investigated. R2 values for end-of-season biomass ranged from 0.64 to 0.89 for different experiments when features from all the data sources were included. Geometry-based features derived from the LiDAR point cloud to characterize plant structure and chemistry-based features extracted from hyperspectral data provided the most accurate predictions. Evaluation of the impact of the time of data acquisition during the growing season on the prediction results indicated that although the most accurate and reliable predictions of final biomass were achieved using remotely sensed data from mid-season to end-of-season, predictions in mid-season provided adequate results to differentiate between promising varieties for selection. The analysis of variance (ANOVA) of the accuracies of the predictive models showed that both the data source and regression method are important factors for a reliable prediction; however, the data source was more important with 69% significance, versus 28% significance for the regression method.

09 BIOMASS FUELS↗

Spatiotemporal Pattern Recognition in the PMU Signals in the WECC system

Phasor measurement unit (PMU) data has been used by multiple power system applications, including state estimation, post event analysis, oscillation detection, model validation, and many others. Still, due to its big data nature and availability to general research institutions, comprehensive understanding of the spatiotemporal patterns and underlying mechanisms are incomplete. This study applies a set of signal processing and machine learning approaches aiming at deciphering the characteristic behaviors of multiple phasor measurement units (PMUs) attributes (e.g., voltage, frequency, rate of change of frequency, phase angle), including their auto-correlation, cross-dependence, similarities and discrepancies across units and temporal scales, and distributions of anomalies and their linkages to potential external factors such as weather events. Data analytics are applied to PMUs from the U.S. Western Electricity Coordinating Council (WECC) system. The PMU measurements, recorded events, outages, and weather extremes are all from real world datasets. The findings from the study and mechanistic understanding of the PMU dynamics help provide guidance on system control or preventing blackouts. The derived metrics can be directly used for adjusting or filtering simulated PMU data used for advanced algorithm development.

Hou, Zhangshuan↗

Improving Di-Higgs Sensitivity at Future Colliders in Hadronic Final States with Machine Learning

One of the central goals of the physics program at the future colliders is to elucidate the origin of electroweak symmetry breaking, including precision measurements of the Higgs sector. This includes a detailed study of Higgs boson (H) pair production, which can reveal the H self-coupling. Since the discovery of the Higgs boson, a large campaign of measurements of the properties of the Higgs boson has begun and many new ideas have emerged during the completion of this program. One such idea is the use of highly boosted and merged hadronic decays of the Higgs boson ($\mathrm{H}\to\mathrm{b}\bar{\mathrm{b}}$, $\mathrm{H}\to\mathrm{W}\mathrm{W}\to\mathrm{q}\bar{\mathrm{q}}\mathrm{q}\bar{\mathrm{q}}$) with machine learning methods to improve the signal-to-background discrimination. In this white paper, we champion the use of these modes to boost the sensitivity of future collider physics programs to Higgs boson pair production, the Higgs self-coupling, and Higgs-vector boson couplings. We demonstrate the potential improvement possible at the Future Circular Collider in hadron mode, especially with the use of graph neural networks.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Nowcasting Earthquakes in Southern California With Machine Learning: Bursts, Swarms, and Aftershocks May Be Related to Levels of Regional Tectonic Stress

Abstract Seismic bursts in Southern California are sequences of small earthquakes strongly clustered in space and time and include seismic swarms and aftershock sequences. A readily observable property of these events, the radius of gyration ( R G ), allows us to connect the bursts to the temporal occurrence of the largest M ≥ 7 earthquakes in California since 1984. In the Southern California earthquake catalog, we identify hundreds of these potentially coherent space‐time structures in a region defined by a circle of radius 600 km around Los Angeles. We compute R G for each cluster then filter them to identify those bursts with large numbers of events closely clustered in space, which we call “compact” bursts. Our basic assumption is that these compact bursts reflect the dynamics associated with large earthquakes. Once we have filtered the burst catalog, we apply an exponential moving average to construct a time series for the Southern California region. We observe that the R G of these bursts systematically decreases prior to large earthquakes, in a process that we might term “radial localization.” The R G then rapidly increases during an aftershock sequence, and a new cycle of “radial localization” then begins. These time series display cycles of recharge and discharge reminiscent of seismic stress accumulation and release in the elastic rebound process. The complex burst dynamics we observe are evidently a property of the region as a whole, rather than being associated with individual faults. This new method allows us to improve earthquake nowcasting, which is a technique to evaluate the current state of hazard in a seismically active region.

58 GEOSCIENCES↗

Model-Agnostic Signal Discovery with Machine Learning: Bridging the Gap Between Theory and Practice

Searches for new phenomena in complex scientific data are predominantly model-dependent, optimized for specific hypotheses, and therefore limited in their coverage of the space of possible signals. Recently, new AI-based model-agnostic search strategies, many of which have been pioneered in high-energy physics, have been proposed which provide a complementary paradigm, prioritizing broad exploration over tailored analyses. These techniques offer an opportunity to enhance the overall discovery potential of modern experiments, especially in regimes where theoretical guidance is scarce. In this document, we review the conceptual framework behind the main classes of AI-based model-agnostic strategies. We discuss the potential pitfalls of these methods, and strategies for their validation and interpretation. We aim for this document to serve as a useful reference both for practitioners and for researchers interested in learning more about these model-agnostic search strategies.

Amram, Oz [Fermilab] (ORCID:0000000237653123)↗

The Rise of Intelligent Materials Science: Unleashing the Power of Machine Intelligence in Characterization

Machine intelligence has the potential to revolutionize materials science, enabling autonomous synthesis, self-driving characterization, and accelerated modeling. However, despite the promise, successful implementation of these methods in day-to-day research remains a challenge. This talk will delve into the reasons behind this, exploring how truly intelligent experiments are hindered by opaque experiment control, a lack of domain-specific models, and human-centric design. Through a focus on the characterization of next-generation microelectronics and energy storage materials, I will share insights from both successful and failed attempts to implement machine intelligence. We will then explore the next steps necessary to unlock the full potential of machine intelligence in materials science, creating a future where intelligent systems work seamlessly alongside researchers to drive innovation and discovery.

autonomous↗

Machine Learning Based Metamodel for Faster Life Cycle Assessment of Large Portfolio of Buildings

Managing a large portfolio of buildings involves decisions on reuse, retrofit, renovation, rehabilitation, and new construction, influenced by trade-offs between performance metrics such as cost, time, and operational flexibility over the building's life cycle. Traditional life cycle assessment tools for evaluating these metrics can be labor- and compute-intensive, requiring extensive data and modeling for each building. Metamodels (or surrogate models) using machine learning have been explored as faster alternatives, but training these models has been hindered by the limited availability of comprehensive data on key life cycle metrics. Recent advancements in machine learning, particularly deep learning techniques like zero-shot and few-shot learning, allow models to learn from sparse or limited data. We propose a machine learning-based metamodel that leverages these techniques for rapid estimation of key building life cycle metrics. This presentation will cover the model architecture, data collection, training, and validation processes, along with an ongoing case study applied to a large portfolio of buildings. We will discuss the model's performance in terms of accuracy, compute time, limitations, and its potential for expanding to additional life cycle metrics. This data-driven approach offers a promising direction for the rapid evaluation of large building portfolios.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Range shifts in a foundation sedge potentially induce large Arctic ecosystem carbon losses and gains

Foundation species have disproportionately large impacts on ecosystem structure and function. As a result, future changes to their distribution may be important determinants of ecosystem carbon (C) cycling in a warmer world. We assessed the role of a foundation tussock sedge (Eriophorum vaginatum) as a climatically vulnerable C stock using field data, a machine learning ecological niche model, and an ensemble of terrestrial biosphere models (TBMs). Field data indicated that tussock density has decreased by ~0.97 tussocks per m2 over the past ~38 years on Alaska's North Slope from ~1981 to 2019. This declining trend is concerning because tussocks are a large Arctic C stock, which enhances soil organic layer C stocks by 6.9% on average and represents 745 Tg C across our study area. By 2100, we project that changes in tussock density may decrease the tussock C stock by 41% in regions where tussocks are currently abundant (e.g. -0.8 tussocks per m2 and -85 Tg C on the North Slope) and may increase the tussock C stock by 46% in regions where tussocks are currently scarce (e.g. +0.9 tussocks per m2 and +81 Tg C on Victoria Island). These climate-induced changes to the tussock C stock were comparable to, but sometimes opposite in sign, to vegetation C stock changes predicted by an ensemble of TBMs. Our results illustrate the important role of tussocks as a foundation species in determining future Arctic C stocks and highlight the need for better representation of this species in TBMs..

54 ENVIRONMENTAL SCIENCES↗

Machine Learning Vacancy Formation Energy in Nickel-Based Superalloys

Thermal vacancies play a critical role in high-temperature Ni-based superalloys and influence various properties such as creep resistance, oxidation, etc. This study systematically investigates the impact of commonly used transition metals (Cr, Co, Fe), refractory metals (Nb, Ta, Mo, W) and other elements (Al, Cu, Ti, Mn) on the thermodynamic stability of 36 binary, 20 ternary, 11 quaternary, 9 quinary, and 3 senary FCC Ni-based alloys covering various elemental combinations. Density functional theory-based studies on Ni-X binary alloys show that higher concentrations of Cr, Nb, Ta, Al, and Ti introduce significant lattice distortions and broaden the distribution of vacancy formation energies (standard deviation up to 0.15 eV). These elements partially donate electrons, reducing their self-consistent chemical potentials relative to single-element reference values and lowering vacancy formation energies, while Co, Fe, Mo, and W show lower charge localization. These trends extend from 3-6 element alloys, where Cr, Nb, and Ta-rich compositions have low-energy states (~0.5 eV) that increase vacancy concentrations. Finally, graph neural network models are developed to screen over 5000 virtual alloys. Eleven leading compositions are identified with mean vacancy formation energy higher than 1.75 eV and vacancy concentration ~2 orders of magnitude lower than pure Ni at 1000 K. These results provide valuable guidelines to achieve controlled defect engineering in structural alloys.

DFT↗

Toward the Detection of Polyglot Files

Standardized file types play a key role in the development and use of computer software. However, it is possible to confound standardized file type processing by creating a file that is valid in multiple file types. The resulting polyglot (many languages) file can confuse file type identification, allowing elements of the file to evade analysis. This is especially problematic for malware detection systems that rely on file type identification for feature extraction. Although work has been done to identify file types using more comprehensive methods than file signatures, accurate identification of polyglot files remains an open problem. Since malware detection systems routinely perform file type-specific feature extraction, polyglot files need to be filtered out prior to ingestion by these systems. Otherwise, malicious content could pass through undetected. To address the problem of polyglot detection we assembled a data set using the mitra tool. We then evaluated the performance of the most commonly used file identification tools, including file, polydet, binwalk, and TrID. Our analysis demonstrates that existing file type detection tools fail to provide reliable polyglot detection. We then evaluated the ability of a range of machine and deep learning models to detect polyglot files. The most performant models were MalConv2 and Catboost, which demonstrated the highest recall on our data set with 95.16% and 95.45%, respectively. These models outperformed existing methods and could be incorporated into a malware detector’s file processing pipeline to filter out potentially malicious polyglots before file type-dependent feature extraction takes place.

Koch, Luke↗

Toward the Detection of Polyglot Files

Standardized file types play a key role in the development and use of computer software. However, it is possible to confound standardized file type processing by creating a file that is valid in multiple file types. The resulting polyglot (many languages) file can confuse file type identification, allowing elements of the file to evade analysis. This is especially problematic for malware detection systems that rely on file type identification for feature extraction. Although work has been done to identify file types using more comprehensive methods than file signatures, accurate identification of polyglot files remains an open problem. Since malware detection systems routinely perform file type-specific feature extraction, polyglot files need to be filtered out prior to ingestion by these systems. Otherwise, malicious content could pass through undetected. To address the problem of polyglot detection we assembled a data set using the mitra tool. We then evaluated the performance of the most commonly used file identification tools, including file, polydet, binwalk, and TrID. Our analysis demonstrates that existing file type detection tools fail to provide reliable polyglot detection. We then evaluated the ability of a range of machine and deep learning models to detect polyglot files. The most performant models were MalConv2 and Catboost, which demonstrated the highest recall on our data set with 95.16% and 95.45%, respectively. These models outperformed existing methods and could be incorporated into a malware detector’s file processing pipeline to filter out potentially malicious polyglots before file type-dependent feature extraction takes place.

Koch, Lucas↗

Machine learning enabled lineshape analysis in optical two-dimensional coherent spectroscopy

Optical two-dimensional (2D) coherent spectroscopy excels in studying coupling and dynamics in complex systems. The dynamical information can be learned from lineshape analysis to extract the corresponding linewidth. However, it is usually challenging to fit a 2D spectrum, especially when the homogeneous and inhomogeneous linewidths are comparable. We implemented a machine learning algorithm to analyze 2D spectra to retrieve homogeneous and inhomogeneous linewidths. The algorithm was trained using simulated 2D spectra with known linewidth values. The trained algorithm can analyze both simulated (not used in training) and experimental spectra to extract the homogeneous and inhomogeneous linewidths. Finally, this approach can be potentially applied to 2D spectra with more sophisticated spectral features.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Quantifying Uncertainty to Improve Decision Making in Machine Learning

Data-driven modeling, including machine learning methods, continue to play an increasing role in society. Data-driven methods impact decision making for applications ranging from everyday determinations about which news people see and control of self-driving cars to high-consequence national security situations related to cyber security and analysis of nuclear weapons reliability. Although modern machine learning methods have made great strides in model induction and show excellent performance in a broad variety of complex domains, uncertainty remains an inherent aspect of any data-driven model. In this report, we provide an update to the preliminary results on uncertainty quantification for machine learning presented in SAND2017-6776. Specifically, we improve upon the general problem definition and expand upon the experiments conducted for the earlier re- port. Most importantly, we summarize key lessons learned about how and when uncertainty quantification can inform decision making and provide valuable insights into the quality of learned models and potential improvements to them.

97 MATHEMATICS AND COMPUTING↗

Quantifying the Known Unknown: Including Marine Sources of Greenhouse Gases in Climate Modeling

Researchers have recently estimated that Arctic submarine permafrost currently traps 60 billion tons of methane and contains 560 billion tons of organic carbon in seafloor sediments and soil, a giant pool of carbon with potentially large feedbacks on the climate system. Unlike terrestrial permafrost, the submarine permafrost system has remained a “known unknown” because of the difficulty in acquiring samples and measurements. Consequently, this potentially large carbon stock never yet considered in global climate models or policy discussions, represents a real wildcard in our understanding of Earth’s climate. This report summarizes our group’s effort at developing a numerical modeling framework designed to produce a first-of-its-kind estimate of Arctic methane gas releases from the marine sediments to the water column, and potentially to the atmosphere, where positive climate feedback may occur. Newly developed modeling capability supported by the Laboratory Directed Research and Development (LDRD) program at Sandia National Laboratories now gives us the ability to probabilistically map gas distribution and quantity in the seabed by using a hybrid approach of geospatial machine learning, and predictive numerical thermodynamic ensemble modeling. The novelty in this approach is its ability to produce maps of useful data in regions that are only sparsely sampled, a common challenge in the Arctic, and a major obstacle to progress in the past. By applying this model to the circum-Arctic continental shelves and integrating the flux of free gas from in situ methanogenesis and dissociating gas hydrates from the sediment column under climate forcing, we can provide the most reliable estimate of a spatially and temporally varying source term for greenhouse gas flux that can be used by global oceanographic circulation and Earth system models (such as DOE’s E3SM). The result will allow us to finally tackle the wildcard of the submarine permafrost carbon system, and better inform us about the severity of future national security threats that sustained climate change poses.

54 ENVIRONMENTAL SCIENCES↗

Conotoxin Prediction: New Features to Increase Prediction Accuracy

Conotoxins are toxic, disulfide-bond-rich peptides from cone snail venom that target a wide range of receptors and ion channels with multiple pathophysiological effects. Conotoxins have extraordinary potential for medical therapeutics that include cancer, microbial infections, epilepsy, autoimmune diseases, neurological conditions, and cardiovascular disorders. Despite the potential for these compounds in novel therapeutic treatment development, the process of identifying and characterizing the toxicities of conotoxins is difficult, costly, and time-consuming. This challenge requires a series of diverse, complex, and labor-intensive biological, toxicological, and analytical techniques for effective characterization. While recent attempts, using machine learning based solely on primary amino acid sequences to predict biological toxins (e.g., conotoxins and animal venoms), have improved toxin identification, these methods are limited due to peptide conformational flexibility and the high frequency of cysteines present in toxin sequences. This results in an enumerable set of disulfide-bridged foldamers with different conformations of the same primary amino acid sequence that affect function and toxicity levels. Consequently, a given peptide may be toxic when its cysteine residues form a particular disulfide-bond pattern, while alternative bonding patterns (isoforms) or its reduced form (free cysteines with no disulfide bridges) may have little or no toxicological effects. Similarly, the same disulfide-bond pattern may be possible for other peptide sequences and result in different conformations that all exhibit varying toxicities to the same receptor or to different receptors. We present here new features, when combined with primary sequence features to train machine learning algorithms to predict conotoxins, that significantly increase prediction accuracy.

collisional cross section↗

Applying corrective machine learning in the E3SM atmosphere model in C++ (EAMxx)

The Simple Cloud-Resolving E3SM Atmosphere Model (SCREAM) is the newest addition to the family of earth system models capable of explicitly resolving convective systems. SCREAM is a kilometer-scale configuration of the advanced E3SM Atmosphere Model (EAMxx), designed for heterogeneous computing architectures. While the enhanced accuracy of kilometer-scale modeling offers significant benefits, it comes with a substantial computational cost, limiting feasible simulation durations to only a few years to a few decades, even on the fastest supercomputers. Machine learning presents an opportunity for scientists to achieve the high accuracy of storm-resolving models at a significantly reduced cost. Building on the previous success of applying corrective machine learning (ML) to the FV3GFS earth system model, this study explores the effects of implementing corrective-ML in EAMxx-SCREAM. We also address the computational challenges of integrating our implementation of corrective-ML, which is written in Python, with the C++/Kokkos EAMxx driver, as well as potential reasons why this approach has not proved as effective for EAMxx-SCREAM as for FV3GFS.

Environmental sciences↗