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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 1,675 records · Page 93

Lean, premixed, prevaporized fuel combustor conceptual design study

Four combustor concepts, designed for the energy efficient engine, utilize variable geometry or other flow modulation techniques to control the equivalence ratio of the initial burning zone. Lean conditions are maintained at high power to control oxides of nitrogen while near stoichometric conditions are maintained at low power for low CO and THC emissions. Each concept was analyzed and ranked for its potential in meeting the goals of the program. Although the primary goal of the program is a low level of nitric oxide emissions at stratospheric cruise conditions, both the ground level EPA emission standards and combustor performance and operational requirements typical of advanced subsonic aircraft engines are retained as goals as well. Based on the analytical projections made, two of the concepts offer the potential of achieving the emission goals; however, the projected operational characteristics and reliability of any concept to perform satisfactorily over an entire aircraft flight envelope would require extensive experimental substantiation before engine adaptation can be considered.

Fiorentino, A. J.↗

Optical Phased Array Antennas using Coupled Vertical Cavity Surface Emitting Lasers

High data rate communication links are needed to meet the needs of NASA as well as other organizations to develop space-based optical communication systems. These systems must be robust to high radiation environments, reliable, and operate over a wide temperature range. Highly desirable features include beam steering capability, reconfigurability, low power consumption, and small aperture size. Optical communication links, using coupled vertical cavity surface emitting laser radiating elements are promising candidates for the transmit portion of these communication links. In this talk we describe a mission scenario, and how the antenna requirements are derived from the mission needs. We describe a potential architecture for this type of antenna, and outline the advantages and drawbacks of this approach relative to competing technologies. The technology we are proposing used coupled arrays of 1550 nm vertical cavity surface emitting lasers for transmission. The feasibility of coupling these arrays together, to form coherent high-power beams that can be modulated at data rates exceeding 1 Gbps, will be explored. We will propose an architecture that enables electronic beam steering, thus mitigating the need for ancillary acquisition, tracking and beam pointing equipment such as needed for current optical communicatin systems. The beam-steering capability we are proposing also opens the possibility of using this technology for inter-satellite communicatin links, and satellite-to-surface links.

Mueller, Carl H.↗

Radiation and Nuclear Technology in Planetary Cave Environments

Many technological and environmental challenges must be resolved to enable successful lunar habitation and exploration, and to maximize scientific return. This presentation is intended as a preliminary discussion on three such areas of interest with the intent to identify likely areas of mutual benefit for collaboration and data sharing between the space nuclear and radiological disciplines with the planetary cave community. First is the previously identified and studied possible application of lunar lava tubes or pits to reduce the solar and cosmic radiation environment burden on crew health and hardware reliability. This is an area of continued interest, and should be kept in the forefront of discussion during the selection of sites for potential exploration or long-term habitation. In theory, the prospect of using existing morphology presents an enticing opportunity to reduce the requirements on landed mass or construction while also reducing dose or fluence of harmful natural radiation. However, such discussions should also include the practical implications of relocating habitation hardware and personnel from a landing site to a subsurface location. Inherent risks associated with landing in proximity to the relevant terrain must also be considered and weighed against those imposed by the natural radiation environment. Second is a discussion on the means by which a long-term habitation module or base of operations may be powered throughout the lunar day-night cycle. Fission surface power presents an opportunity to establish round-the-clock power in any lunar surface environment, including permanently shadowed regions where solar panels cannot operate, or in any other non-polar region where solar radiation is available for no more than two weeks per four-week cycle. Among the drawbacks of fission surface power is the need to either land and co-locate a heavy shield to minimize radiological consequences to personnel or equipment, land and operate construction equipment capable of restructuring the in-situ regolith to provide appropriate shielding, or to make use of existing topology features (e.g. craters or pits) to serve as pre-formed radiation barriers. A realistic assessment of the practicality of this third option should involve the selection of candidate features from existing surveys, and assess the effectiveness of the approach using modern radiation transport methodologies. Consideration must be made for the needs to reject waste heat in the thermal power conversion process, which typically requires the use of large area radiators. Energy must be exchanged from the reactor and power conversion system to such radiators, and the impacts on thermal efficiency and secondary scatter of nuclear radiation must be considered. Further consideration should be made for the implications of placement of a power source such that it does not sacrifice valuable scientific opportunity. Placement of a reactor is likely to thereafter prevent personnel access within that feature. Third is a discussion on the use of portable radioisotope power systems (RPS) within confined spaces, both with respect to the dose effects of emitted nuclear radiation and also performance associated with emitted thermal radiation. Radioisotope power systems provide a unique capability to power objects with no reliance upon solar radiance. However, their useable power production relies upon the flow of heat from ‘hot side’ (decaying radioisotope) to ‘cold side’ (radiators emitting heat to space). In the case of a confined volume in vacuum such as a lunar lava tube, that radiated energy will absorb into the wall, which is already above the ‘cold background’ temperature of dark space, and then gradually rises in temperature. That temperature rise, and its implications on availability of useable electrical power, will depend upon factors such as enclosure volume, thermal emissivity/absorptivity, and thermal conductivity through the depth of absorbing media. The advantages of nuclear technology may prove to enable unique scientific exploration opportunities, both above the lunar surface and below. In turn, the unique advantages of lunar lava tubes or pits may present unique opportunities to enhance the application of these technologies and to mitigate the effects of radiation from both natural and technological sources. A discussion on these pairings may prove to be valuable to all, in our endeavor to explore our neighboring worlds.

Radiation↗

Hybrid Solar GHP Simulator

This project provides an easy-to-use, menu-driven, software tool for designing hybrid solar-geothermal heat pump systems (GHP) for both heating- and cooling-dominated buildings. No such design tool currently exists. In heating-dominated buildings, the design approach takes advantage of glazed solar collectors to effectively balance the annual thermal loads on the ground with renewable solar energy. In cooling-dominated climates, the design approach takes advantage of relatively low-cost, unglazed solar collectors as the heat rejecting component. The primary benefit of hybrid GHPs is the reduced initial cost of the ground heat exchanger (GHX). Furthermore, solar thermal collectors can be used to balance the ground loads over the annual cycle, thus making the GHX fully sustainable; in heating-dominated buildings, the hybrid energy source (i.e., solar) is renewable, in contrast to a typical fossil fuel boiler or electric resistance as the hybrid component; in cooling-dominated buildings, use of unglazed solar collectors as a heat rejecter allows for passive heat rejection, in contrast to a cooling tower that consumes a significant amount of energy to operate, and hybrid GHPs can expand the market by allowing reduced GHX footprint in both heating- and cooling-dominated climates. The design tool allows for the straight-forward design of innovative GHP systems that currently pose a significant design challenge. The project lays the foundations for proper and reliable design of hybrid GHP systems, overcoming a series of difficult and cumbersome steps without the use of a system simulation approach, and without an automated optimization scheme. As new technologies and design concepts emerge, sophisticated design tools and methodologies must accompany them and be made usable for practitioners. Lack of reliable design tools results in reluctance of practitioners to implement more complex systems. A menu-driven software tool for the design of hybrid solar GHP systems is provided that is based on mathematically robust, validated models. An automated optimization tool is used to balance ground loads and incorporated into the simulation engine. With knowledge of the building loads, thermal properties of the ground, the borehole heat exchanger configuration, the heat pump peak hourly and seasonal COP for heating and cooling, the critical heat pump design entering fluid temperature, and the thermal performance of a solar collector, the total GHX length can be calculated along with the area of a supplemental solar collector array and the corresponding reduced GHX length. An economic analysis module allows for the calculation of the lowest capital cost combination of solar collector area and GHX length.

Yavuzturk, Cy↗

Secrecy Analysis of Uplink IM-OFDMA Systems in the Presence of IQ Imbalance

This article introduces the secrecy analysis of the index modulation-based orthogonal frequency division multiple access (IM-OFDMA) schemes by considering the in-phase and quadrature imbalance (IQI) presence at the users' RF front ends. In particular, by assuming the existence of an eavesdropper, the secrecy performance of the considered uplink multiple-access system is investigated through the strictly positive secrecy capacity and secrecy outage probability, and closed-form expressions are derived for both quantities. Moreover, the secrecy performance is conducted regarding IQI compensation based on a preamble-based estimation method. Further, analysis of the impact of the different parameters of IM-OFDMA, IQI, and estimation method is included via analytical and simulation-based results. In conclusion, the results reveal that IM-OFDMA is more reliable in secrecy performance than OFDMA, regardless of whether IQI is present. Also, IQI compensation can lead to a better secrecy performance compared to the case of no IQI.

42 ENGINEERING↗

Space aging of solid rocket materials

Solid rocket propellant and rocket motor components were aged in a vented container on the interior of the LDEF. This paper will present the results of aging the Improved Performance Space Motor-II/Payload Assist Module-Delta II (IPSM-II/PAM-DII) space motor components. Ballistic and mechanical properties of the space aged main propellant, igniter propellant, and ignition system were compared with similar data from preflight and ground aged samples. Mechanical properties of the composite materials and bonded joints used in the motor case, insulation, liner, nozzle, exit cone, and skirt were similarly evaluated. The space aging results will be compared to data collected in a ground based vacuum aging program on similar components. The operation of the vacuum actuated venting valve and pressure actuated resealing of the container will also be addressed. The materials tested showed no significant changes due to space aging. These results indicate that properly designed solid rocket motors can be expected to perform reliably after extended periods of exposure to a space environment.

Dean M Lester↗

Advancing the Deployment of Utility-Scale Photovoltaic Plants in the Northeast

As one of the premier research laboratories operated by the Department of Energy, Brookhaven National Laboratory (BNL) is pursuing an energy research agenda that focuses on renewable energy systems and will help to secure the nation's energy security. A key element of the BNL research is the advancement of grid-connected utility-scale solar photovoltaic (PV) plants, particularly in the northeastern part of the country where BNL is located. While a great deal of information has been generated regarding solar PV systems located in mostly sunny, hot, arid climates of the southwest US, very little data is available to characterize the performance of these systems in the cool, humid, frequently overcast climates experienced in the northeastern portion of the country. Recognizing that there is both a need and a market for solar PV generation in the northeast, BNL is pursuing research that will advance the deployment of this important renewable energy resource. BNL's research will leverage access to unique time-resolved data sets from the 37MWp solar array recently developed on its campus. In addition, BNL is developing a separate 1MWp solar research array on its campus that will allow field testing of new PV system technologies, including solar modules and balance of plant equipment, such as inverters, energy storage devices, and control platforms. These research capabilities will form the cornerstone of the new Northeast Solar Energy Research Center (NSERC) being developed at BNL. In this paper, an overview of BNL's energy research agenda is given, along with a description of the 37MWp solar array and the NSERC.

14 SOLAR ENERGY↗

Demonstration of a fault impact reduction control module for wind turbines

Abstract. Traditionally, wind turbines in distributed applications make control decisions as isolated systems. They generally provide maximum power output during operation and manage internal faults with little consideration of the rest of the power system. Although fault detection and tolerance schemes are widely researched and implemented, controls to ameliorate such faults are uncommon in research and industry. The rapid shutdown of a wind turbine in a large transmission-connected wind plant will have a minimal impact on a large power system, but in a microgrid or isolated grid context the abrupt loss of a single wind turbine may cause grid instability and high stress on the system. This paper demonstrates a fault impact reduction control (FIRC) module for a wind turbine, which implements wider warning thresholds around fault thresholds. When the turbine crosses a warning threshold, the controller sends its predicted action to the grid controller, which facilitates the grid operator’s response to a potential wind turbine fault and then takes appropriate action to ameliorate the fault. Various test cases demonstrate the controller action under a variety of faults, and various scenarios demonstrate the grid benefit of an FIRC in both microgrid- and grid-connected contexts. The FIRC maximizes wind turbine generation and eases generation transition under a variety of fault scenarios. The FIRC module is easy to integrate with most existing controllers, just requiring derate capability, and can be easily modified to include the various warnings and thresholds that the user desires. This analysis is mainly performed in a MATLAB-Simulink-based research wind turbine model and is also implemented in the existing LabVIEW-based controller of the same research turbine at NREL.

17 WIND ENERGY↗

Improving Computational Efficiency of Mechanical Finite Element Method Simulations for PV Modules: Preprint

In this work we have elucidated the trade off between structural mechanics FEM model accuracy and computation time by employing lower fidelity viscoelastic models. Results indicate that computation time can easily be cut in half while only expecting a potential maximum error of 10 % by considering lower fidelity models. A novel approach to produce the Prony Series fit for viscoelastic characterization has also been presented. Employing this approach, we were able to achieve a further 10 % reduction in computation time without further sacrificing simulation accuracy.

41 EE - Solar Energy Technologies Office (EE-4S)↗

IEA PVPS Task 13 Techno-Economic Study of Bifacial Photovoltaic Systems on Single Axis Trackers

The International Energy Agency PVPS Task 13 has assembled an international team of photovoltaic (PV) researchers from government labs, academia, and industry to study the specific application of bifacial PV modules deployed on tracking systems. This configuration is of particular interest as it has been identified as the PV system design with the lowest Levelized Cost of Electricity (LCOE) for over 90% of the world [1]. As such, much research, development, and commercial activity are focused on further optimizing this system design for different regions and markets, including field deployment and advanced modeling activities. Despite these efforts, many challenges remain to overcome with this system design. This conference paper will report on several areas the team is working on as part of this project. The first part of this study focuses on extensive interviews with PV tracker companies (we have identified 35) and customers worldwide to identify emerging technology trends, design diversity, market environments, and the reliability and performance of these systems. We will provide a market summary of technologies such as advanced tracking algorithms, methods for dealing with topography within the PV plant, different system configurations and layouts, backside irradiance optimization from albedo enhancement, and ground sculpting. We will also review dual-use applications of tracked bifacial systems, such as Agrivoltaics and Building-Integrated PV. These interviews are underway now, and we will be able to report our initial findings at the conference. The second part of the study focuses on summarizing performance monitoring and evaluation methods, with particular attention to capacity and acceptance testing for such systems. The third part of the study reviews performance modeling and yield assessment methods for these tracked bifacial PV systems. The final part of the study covers reliability and operations, and maintenance data from these systems.

albedo↗

Radiation-Induced Noise Resilience of Neuromorphic Architectures

Neuromorphic event-based networks use asynchronous time-dependent information to extract features from input data that can allow for edge-based distributed applications such as object recognition. The noise resilience properties of such networks, especially in the context of space applications, are yet to be explored. In this paper, we use the hierarchy of time surfaces (HOTS) algorithm, which is one of the neuromorphic algorithms, to understand the least and most resilient modules in a neuromorphic network. The HOTS algorithm relies on the computing of time surfaces that maps the temporal delays between neighboring pixels into normalized features that involve many computations that are also found in other neuromorphic networks such as exponential decays, distance computations, etcetera. We implemented HOTS on a Digilent PYNQ board with a Xilinx Zynq 7020 system on a chip, and we subjected the boards running the HOTS network inference to neutron radiation at the Los Alamos Neutron Science Center. Furthermore, we used simulation models from our previous similar experiments on the event-based sensor to create a neutron induced noise model to quantify the effect of this noise on the overall performance of the network. This experiment provides the preliminary measurements of the reliability of the HOTS algorithm and proposes methods to create a more reliable HOTS architecture in future spacecraft missions.

Engineering↗

LandRAY PTO Testing Utilizing the NREL NWTC 5MW Dynamometer

The overarching project objective is to demonstrate the feasibility of using an innovative PowerTake-Off (PTO) Module in Columbia Power's utility-scale wave energy converter (WEC). The PTO Module uniquely combines a large-diameter, direct-drive, rotary permanent magnet generator; a patent-pending rail-bearing system; and a corrosion-resistant fiber-reinforced-plastic structure

16 TIDAL AND WAVE POWER↗

Performance of coded MFSK in a Rician fading channel

The performance of convolutional codes in conjunction with noncoherent multiple frequency shift-keyed (MFSK) modulation and Viterbi maximum likelihood decoding on a Rician fading channel is examined in detail. While the primary motivation underlying this work has been concerned with system performance on the planetary entry channel, it is expected that the results are of considerably wider interest. Particular attention is given to modeling the channel in terms of a few meaningful parameters which can be correlated closely with the results of theoretical propagation studies. Fairly general upper bounds on bit error probability performance in the presence of fading are derived and compared with simulation results using both unquantized and quantized receiver outputs. The effects of receiver quantization and channel memory are investigated and it is concluded that the coded noncoherent MFSK system offers an attractive alternative to coherent BPSK in providing reliable low data rate communications in fading channels typical of planetary entry missions.

Modestino, J. W.↗

Development of a Multi-Stage Filter System for Cabin Ventilation Systems on the ISS and Future Deep Space Missions

The National Aeronautics and Space Administration's (NASA's) deep space exploration missions will be of significant duration requiring long-life and reliably performing spacecraft cabin ventilation filters. A particulate filter system is being developed at NASA Glenn Research Center (GRC) to meet the challenges of these remote and long duration missions. The capabilities and features of the filter system are expected to expand the life and reduce the maintenance requirements over that of the current ISS (International Space Station) filter by providing pre-filtration stages with novel self-cleaning and regenerable techniques. The filter provides two regenerable pre-filtration stages using a screen mesh media and an impactor collection system, and also provides intermediate stage filtration employing self-replacing filter media. The filter system is also designed to be compatible with the interfaces and performance requirements of the ISS distributed ventilation architecture in the US modules to facilitate testing on ISS type test or mock up platforms. Currently, a prototype of the filter system is undergoing tests in a custom configured filter test stand at the NASA GRC. The test stand provides the same range of flow rates produced on the ISS distributed architecture, and is equipped and instrumented to perform filter tests based on industrial test standards. The test stand has been used successfully to perform filter and flow performance test on returned ISS Bacterial Filter Elements. Similar test protocols were used to characterize the performance of the current filter system. Different performing grades of filter media will be installed and tested on the filter system, and different test particle standards will be used to simulate the range of particulate matter particles and debris the filter will see during a mission. This paper will present results and analysis of the test data to guide and provide input to the next generation filter system.

ISS↗

Impacts of Voltage-Based Grid-Support Functions on Energy Production of PV Customers: Preprint

This paper presents the impact of grid-support utility-interactive inverter functions, such as volt/volt-ampere reactive and volt/watt controls, on quasi-steady-state feeder voltages and on photovoltaic (PV) customer energy production on a real distribution feeder in Oahu, Hawai'i. These autonomous inverter controls provide an effective means to modulate active and reactive power based on local voltage measurements and therefore serve as good candidates for non-wire alternatives to increase PV hosting capacity. However, because the activation of these functions can result in PV energy curtailment, this study addresses the concerns about the impact of these advanced inverter controls on curtailment through detailed quasi-static time series (QSTS) simulations. This study proposes four metrics-maximum and average grid-support function curtailments, average increased generation, and average net generation change-to assess the impact of a given control on PV systems located on customer sites. For representative scenarios modeled in detail, it was found that curtailment of PV production is negligible for customers where peak voltage is within ANSI C84.1 ranges. A reliable relationship between curtailment and peak customer voltage is demonstrated, allowing peak voltage to be used as an indicator of curtailment without the need to measure curtailment directly.

14 SOLAR ENERGY↗

IM3 Projected U.S. Western Interconnection Grid Stress Dataset

This dataset provides projected grid stress and reliability results (including all model inputs and outputs from GO WEST and TEP) for Integrated Multisector, Multiscale Modeling (IM3) Phase 2 simulations across eight different scenarios for the U.S. Western Interconnection through 2055. The scenarios include combinations of two Shared Socioeconomic Pathways (SSP3 and SSP5) with four high-resolution climate projections specific to the United States from a set of Thermodynamic Global Warming (TGW) simulations. These climate projections include "hotter" and "cooler" variants for two Representative Concentration Pathways (RCP4.5 and RCP8.5). The resulting eight simulations are: rcp45cooler_ssp3 rcp45cooler_ssp5 rcp45hotter_ssp3 rcp45hotter_ssp5 rcp85cooler_ssp3 rcp85cooler_ssp5 rcp85hotter_ssp3 rcp85hotter_ssp5 GO WEST is an open-source power grid modeling framework for the U.S. Western Interconnection, which allows users to tailor the model depending on their research study and science questions. It covers 28 balancing authorities (BAs) and 12 states in U.S. Western Interconnection. GO WEST allows users to select different number of nodes and come up with a simplified network by utilizing 10,000 nodal topology of the U.S. Western Interconnection (ACTIVSg10k). Users can select different number of nodes, mathematical formulations (linear programming vs. mixed-integer linear programming), transmission line limit scaling factors, and hurdle rate scaling factors. GO WEST offers a unit commitment and economic dispatch (UC/ED) module to simulate grid operations on an hourly scale. In this sense, users can calibrate and validate their model versions by comparing model outputs to historical datasets. TEP is an open-source transmission capacity expansion model, built on the GO WEST framework. It utilizes linear programming to optimize transmission capacity addition investment on existing lines within the GO WEST framework. The TEP model only increases the thermal capacity of existing transmission lines and does not add new lines to the system, which leaves the topology preserved. In order to use TEP model, users need to create scenarios with the GO WEST framework. Please refer to README file for a detailed description of the dataset including individual files and references.

Capacity Expansion Model↗

NASA Tech Briefs, May 2012

Topics covered include: An "Inefficient Fin" Non-Dimensional Parameter to Measure Gas Temperatures Efficiently; On-Wafer Measurement of a Multi-Stage MMIC Amplifier with 10 dB of Gain at 475 GHz; Software to Control and Monitor Gas Streams; Miniaturized Laser Heterodyne Radiometer (LHR) for Measurements of Greenhouse Gases in the Atmospheric Column; Anomaly Detection in Test Equipment via Sliding Mode Observers; Absolute Position of Targets Measured Through a Chamber Window Using Lidar Metrology Systems; Goldstone Solar System Radar Waveform Generator; Fast and Adaptive Lossless Onboard Hyperspectral Data Compression System; Iridium Interfacial Stack - IrIS; Downsampling Photodetector Array with Windowing; Optical Phase Recovery and Locking in a PPM Laser Communication Link; High-Speed Edge-Detecting Line Scan Smart Camera; Optical Communications Channel Combiner; Development of Thermal Infrared Sensor to Supplement Operational Land Imager; Amplitude-Stabilized Oscillator for a Capacitance-Probe Electrometer; Automated Performance Characterization of DSN System Frequency Stability Using Spacecraft Tracking Data; Histogrammatic Method for Determining Relative Abundance of Input Gas Pulse; Predictive Sea State Estimation for Automated Ride Control and Handling - PSSEARCH; LEGION: Lightweight Expandable Group of Independently Operating Nodes; Real-Time Projection to Verify Plan Success During Execution; Automated Performance Characterization of DSN System Frequency Stability Using Spacecraft Tracking Data; Web-Based Customizable Viewer for Mars Network Overflight Opportunities; Fabrication of a Cryogenic Terahertz Emitter for Bolometer Focal Plane Calibrations; Fabrication of an Absorber-Coupled MKID Detector; Graphene Transparent Conductive Electrodes for Next- Generation Microshutter Arrays; Method of Bonding Optical Elements with Near-Zero Displacement; Free-Mass and Interface Configurations of Hammering Mechanisms; Wavefront Compensation Segmented Mirror Sensing and Control; Long-Life, Lightweight, Multi-Roller Traction Drives for Planetary Vehicle Surface Exploration; Reliable Optical Pump Architecture for Highly Coherent Lasers Used in Space Metrology Applications; Electrochemical Ultracapacitors Using Graphitic Nanostacks; Improved Whole-Blood-Staining Device; Monitoring Location and Angular Orientation of a Pill; Molecular Technique to Reduce PCR Bias for Deeper Understanding of Microbial Diversity; Laser Ablation Electrodynamic Ion Funnel for In Situ Mass Spectrometry on Mars; High-Altitude MMIC Sounding Radiometer for the Global Hawk Unmanned Aerial Vehicle; PRTs and Their Bonding for Long-Duration, Extreme-Temperature Environments; Mid- and Long-IR Broadband Quantum Well Photodetector; 3D Display Using Conjugated Multiband Bandpass Filters; Real-Time, Non-Intrusive Detection of Liquid Nitrogen in Liquid Oxygen at High Pressure and High Flow; Method to Enhance the Operation of an Optical Inspection Instrument Using Spatial Light Modulators; Dual-Compartment Inflatable Suitlock; Large-Strain Transparent Magnetoactive Polymer Nanocomposites; Thermodynamic Vent System for an On-Orbit Cryogenic Reaction Control Engine; Time Distribution Using SpaceWire in the SCaN Testbed on ISS; and Techniques for Solution- Assisted Optical Contacting.

Source record↗

Small Ion Channel Linking Molecular Simulations and Electrophysiology

Ion channels are pore-forming protein assemblies that mediate the transport of small ions across cell membranes. Otherwise, membrane bilayers would be almost impermeable to ions incapable to traverse the low dielectric constant, hydrophobic membrane core. Ion channels are ubiquitous to all life forms. In humans and other higher organisms they play the central role in conducting nerve impulses, cardiac functions, muscle contraction and apoptosis. On the other extreme of biological complexity, viral ion channels (viroporins) influence many stages of the virus infection cycle either through regulating virus replication, such as entry, assembly and release or modulating the electrochemical balance in the subcellular compartments of host cells. Ion channels were crucial components of protocells. Their emergence facilitated adaptation of nascent life to different environmental conditions. The earliest ion channels must have been much simpler than most of their modern ancestors. Viral channels are among only a few naturally occurring models to study the structure, function and evolution of primordial channels. Experimental studies of these properties are difficult and often unreliable. In principle, computational methods, and molecular dynamics (MD) simulations in particular, can aid in providing information about both the structure and the function of ion channels. However, MD suffers from its own problems, such as inability to access sufficiently long time scales or limited accuracy of force fields. It is, therefore, essential to determine the reliability of MD simulations. We propose to do so on the basis of two criteria. One is channel stability on time scales that extend for several microseconds or longer. The other is the ability to reproduce the measured ionic conductance as a function of applied voltage. If both the stability and the calculated ionic conductance are satisfactory it will greatly increase our confidence that the structure and the function of a channel are described sufficiently accurately. To our knowledge, long time scale stability (approx.10 micro-sec) and the correct electrophysiology have been shown so far for only one channel - the synthetic LS3 hexamer). In this presentation, this approach will be discussed in application to two viral channels - Vpu, encoded by the HIV-1 genome and p7 of hepatitis C.

Pohorille, Andrzej↗