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At least 1,711 records · Page 95

Cross two photon absorption in a silicon photonic crystal waveguide fiber taper coupler with a physical junction

Cross two photon absorption in silicon is characterized using a tapered fiber photonic crystal silicon waveguide coupler. There is a physical junction between the tapered fiber and the waveguide constituting a stand-alone device. This device is used to obtain the spectrum for cross two photon absorption coefficient per unit volume of interaction between photons of nondegenerate energy. The corresponding Kerr coefficient per unit volume of interaction is also experimentally extracted. The thermal resistance of the device is also experimentally determined and the response time of the device is estimated for on-chip all-optical signal processing and data transfer between optical signals of different photon energies.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Solution characterization of the dynamic conjugative entry exclusion protein TraG

The R100 plasmid and the secretion system it encodes are representative of F-like conjugative type IV secretion systems for the transmission of mobile DNA elements in gram-negative bacteria, serving as a major contributor to the spread of antibiotic resistance in bacterial pathogens. The TraG protein of F-like systems consists of a membrane-bound N-terminal domain and a periplasmic C-terminal domain, denoted TraG*. TraG* is essential in preventing redundant DNA transfer through a process termed entry exclusion. In the donor cell, it interacts with TraN to facilitate mating pair stabilization; however, if a mating pore forms between bacteria with identical plasmids, TraG* interacts with its cognate TraS in the inner membrane of the recipient bacterium to prevent redundant donor–donor conjugation. Structural studies of TraG* from the R100 plasmid have revealed the presence of a dynamic region between the N- and C-terminal domains of TraG. Thermofluor, circular dichroism, collision-induced unfolding–mass spectrometry, and size exclusion chromatography linked to multiangle light scattering and small angle x-ray scattering experiments indicated an N-terminal truncation mutant displayed higher stability and less disordered content relative to full-length TraG*. The 45 N-terminal residues of TraG* are hypothesized to serve as part of a flexible linker between the two independently functioning domains.

59 BASIC BIOLOGICAL SCIENCES↗

Cognitive simulation models for inertial confinement fusion: Combining simulation and experimental data

The design space for inertial confinement fusion (ICF) experiments is vast, and experiments are extremely expensive. Researchers rely heavily on computer simulations to explore the design space in search of high-performing implosions. However, ICF multiphysics codes must make simplifying assumptions, and thus deviate from experimental measurements for complex implosions. For more effective design and investigation, simulations require input from past experimental data to better predict future performance. In this work, we describe a cognitive simulation method for combining simulation and experimental data into a common, predictive model. This method leverages a machine learning technique called “transfer learning,” the process of taking a model trained to solve one task, and partially retraining it on a sparse dataset to solve a different, but related task. In the context of ICF design, neural network models are trained on large simulation databases and partially retrained on experimental data, producing models that are far more accurate than simulations alone. Here, we demonstrate improved model performance for a range of ICF experiments at the National Ignition Facility and predict the outcome of recent experiments with less than 10% error for several key observables. We discuss how the methods might be used to carry out a data-driven experimental campaign to optimize performance, illustrating the key product—models that become increasingly accurate as data are acquired.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Enhanced collisionless laser absorption in strongly magnetized plasmas

We report that strongly magnetizing a plasma adds a range of waves that do not exist in unmagnetized plasmas and enlarges the laser-plasma interaction (LPI) landscape. In this paper, we use particle-in-cell simulations to investigate strongly magnetized LPI in one dimension under conditions relevant for magneto-inertial fusion experiments, focusing on a regime where the electron-cyclotron frequency is greater than the plasma frequency and the magnetic field is at an oblique angle with respect to the wave vectors. We show that when electron-cyclotron-like hybrid wave frequency is about half the laser frequency, the laser light resonantly decays to magnetized plasma waves via primary and secondary instabilities with large growth rates. These distinct magnetic-field-controlled instabilities, which we collectively call two-magnon decays, are analogous to two-plasmon decays in unmagnetized plasmas. Since additional phase mixing mechanisms are introduced by the oblique magnetic field, collisionless damping of large-amplitude magnetized waves substantially broadens the electron distribution function, especially along the direction of the magnetic field. During this process, energy is transferred efficiently from the laser to plasma waves and then to electrons, leading to a large overall absorptivity when strong resonances are present. The enhanced laser energy absorption may explain hotter-than-expected temperatures observed in magnetized laser implosion experiments and may also be exploited to develop more efficient laser-driven x-ray sources.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Resonances of electromagnetically induced transparency and absorption in a light field of elliptically polarised waves

Electromagnetically induced transparency (EIT) and electromagnetically induced absorption (EIA) resonances excited by a strong two-frequency field are considered for various values of the total angular momenta of the ground (F{sub g}) and excited (F{sub e}) states at a degenerated optical closed transition F{sub g} → F{sub e}. The light field is formed by two co-propagating waves with arbitrary elliptical polarisations. The process of spontaneous transfer of anisotropy from the excited state to the ground state is shown to determine the formation of the EIA resonance at the transition F{sub g} = F → F{sub e} = F + 1. The results obtained generalise the classification of transitions into ‘bright’ (F{sub g} = F → F{sub e} = F + 1) and ‘dark’ (F{sub g} = F → F{sub e} = F and F{sub g} = F → F{sub e} = F – 1) transitions with respect to the direction of a subnatural resonance. (paper)

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Electron Flow in Multiheme Bacterial Cytochromes is a Balancing Act Between Heme Electronic Interaction and Redox Potentials

The naturally widespread process of electron transfer from metal reducing bacteria to extracellular solid metal oxides entails unique biomolecular machinery optimized for long-range electron transport. To perform this function efficiently microorganisms have adapted multi-heme c-type cytochromes to arrange heme cofactors into wires that cooperatively span the cellular envelope, transmitting electrons along distances greater than 100 Angstroms. Implications and opportunities for bionanotechnological device design are self-evident. However, at the molecular level how these proteins shuttle electrons along their heme wires, navigating intraprotein intersections and interprotein interfaces effciently, remains a mystery so far inaccessible to experiment. To shed light on this critical topic, we carried out extensive computer simulations to calculate Marcus theory quantities for electron transfer along the ten heme cofactors in the recently crystallized outer membrane cytochrome MtrF. The combination of electronic coupling matrix elements with free energy calculations of heme redox potentials and reorganization energies for heme-to-heme electron transfer allows the step-wise and overall electron transfer rate to be estimated and understood in terms of structural and dynamical characteristics of the protein. By solving a master equation for electron hopping, we estimate an intrinsic, maximum possible electron flux through solvated MtrF of 104-105 s-1, consistent with recently measured rates for the related MtrCAB protein complex. Intriguingly, this flux must navigate thermodynamically uphill steps past low potential hemes. Our calculations show that the rapid electron transport through MtrF is the result of a clear correlation between heme redox potential and the strength of electronic coupling along the wire: Thermodynamically uphill steps occur only between electronically well connected stacked heme pairs. This suggests that the protein evolved to harbor low potential hemes, presumably necessary for reduction of certain soluble substrates, without slowing down electron ow. These findings are particularly profound in light of the apparently well conserved staggered cross heme wire structural motif in functionally related outer-membrane proteins.

Environmental Molecular Sciences Laboratory↗

Many-core applications to online track reconstruction in HEP experiments

Interest in parallel architectures applied to real time selections is growing in High Energy Physics (HEP) experiments. In this paper we describe performance measurements of Graphic Processing Units (GPUs) and Intel Many Integrated Core architecture (MIC) when applied to a typical HEP online task: the selection of events based on the trajectories of charged particles. We use as benchmark a scaled-up version of the algorithm used at CDF experiment at Tevatron for online track reconstruction – the SVT algorithm – as a realistic test-case for low-latency trigger systems using new computing architectures for LHC experiment. We examine the complexity/performance trade-off in porting existing serial algorithms to many-core devices. Measurements of both data processing and data transfer latency are shown, considering different I/O strategies to/from the parallel devices.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

A Data Handling System for Modern and Future Fermilab Experiments

Current and future Fermilab experiments such as Minerva, NOνA, and MicroBoone are now using an improved version of the Fermilab SAM data handling system. SAM was originally used by the CDF and D0 experiments for Run II of the Fermilab Tevatron to provide file metadata and location cataloguing, uploading of new files to tape storage, dataset management, file transfers between global processing sites, and processing history tracking. However SAM was heavily tailored to the Run II environment and required complex and hard to deploy client software, which made it hard to adapt to new experiments. The Fermilab Computing Sector has progressively updated SAM to use modern, standardized, technologies in order to more easily deploy it for current and upcoming Fermilab experiments, and to support the data preservation efforts of the Run II experiments.

Illingworth, R. A.↗

Data acquisition and slow control interface for the Mu2e experiment

The Mu2e experiment at the Fermilab Muon Campus will search for the coherent neutrinoless conversion of a muon into an electron in the field of an aluminum nucleus with a sensitivity improvement by a factor of 10000 over existing limits. The Mu2e Trigger and Data Acquisition System (TDAQ) uses otsdaq as the online Data Acquisition System (DAQ) solution. Developed at Fermilab, otsdaq integrates both the artdaq DAQ and the art analysis frameworks for event transfer, filtering, and processing. otsdaq is an online DAQ software suite with a focus on flexibility and scalability and provides a multi-user, web-based, interface accessible through a web browser. The data stream from the detector subsystems is read by a software filter algorithm that selects events which are combined with the data flux coming from a cosmic ray veto system. The Detector Control System (DCS) has been developed using the Experimental Physics and Industrial Control System (EPICS) open source platform for monitoring, controlling, alarming, and archiving. The DCS system has been integrated into otsdaq. A prototype of the TDAQ and the DCS systems has been built at Fermilab's Feynman Computing Center. In this study, we report on the progress of the integration of this prototype in the online otsdaq software.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

The effects of magnetic fields and protostellar feedback on low-mass cluster formation

In this paper, we present a large suite of simulations of the formation of low-mass star clusters. Our simulations include an extensive set of physical processes – magnetohydrodynamics, radiative transfer, and protostellar outflows – and span a wide range of virial parameters and magnetic field strengths. Comparing the outcomes of our simulations to observations, we find that simulations remaining close to virial balance throughout their history produce star formation efficiencies and initial mass function (IMF) peaks that are stable in time and in reasonable agreement with observations. Our results indicate that small-scale dissipation effects near the protostellar surface provide a feedback loop for stabilizing the star formation efficiency. This is true regardless of whether the balance is maintained by input of energy from large-scale forcing or by strong magnetic fields that inhibit collapse. In contrast, simulations that leave virial balance and undergo runaway collapse form stars too efficiently and produce an IMF that becomes increasingly top heavy with time. In all cases, we find that the competition between magnetic flux advection towards the protostar and outward advection due to magnetic interchange instabilities, and the competition between turbulent amplification and reconnection close to newly formed protostars renders the local magnetic field structure insensitive to the strength of the large-scale field, ensuring that radiation is always more important than magnetic support in setting the fragmentation scale and thus the IMF peak mass. The statistics of multiple stellar systems are similarly insensitive to variations in the initial conditions and generally agree with observations within the range of statistical uncertainty.

79 ASTRONOMY AND ASTROPHYSICS↗

Transfer Learning approach to parking lot classification in aerial imagery

The importance of satellite imagery analysis has increased dramatically over the last several years, keeping pace with the rapid improvements seen in both remote sensing platforms and sensors. As this field expands, so too does the interest in using machine learning methods to automate parts of the imagery analyst’s workflow. In this paper we address one aspect of this challenge: the development of a method for the automatic extraction of parking lots from aerial imagery. To the best of our knowledge, there has been no prior work conducted on the development of an end-to-end pipeline for this particular task. Due to the limited size of our dataset and to accommodate the potentially limited size of future datasets, we propose a deep learning approach using transfer learning. This process hinges upon the use of state of the art Convolutional Neural Networks (CNNs), trained on general image classification datasets. These networks were then fine-tuned on our custom dataset, to establish a comprehensive benchmark for this task. Our method exhibits promising results for automatic parking lot extraction, and is generalizable enough to work with different input types, including high resolution aerial orthoimagery, satellite imagery, full motion video (FMV), and UAV imagery.

97 MATHEMATICS AND COMPUTING↗

Experimental and Numerical Analysis of Additively Manufactured Inconel 718 Coupons With Lattice Structure

Abstract In the present paper, two lattice geometries suitable for near surface and double wall cooling were developed and tested. The first type of unit cell consisted of six ligaments of 0.5 mm diameter joined at a common vertex near the middle. The second type of unit cell was derived from the first type by adding four mutually perpendicular ligaments in the middle plane. Two lattice configurations, referred to as L1 and L2, respectively, were obtained by repeating the corresponding unit cell in streamwise and spanwise directions in an inline fashion. Test coupons consisting of these lattice geometries embedded inside rectangular cooling channel with dimensions of 2.54 mm height, 38.07 mm width, and 38.1 mm in length were fabricated using Inconel 718 powder and selective laser sintering (SLS) process. The heat transfer and pressure drop performance was then evaluated using steady-state tests with constant wall temperature boundary condition and for channel Reynolds number ranging from 2800 to 15,000. The lattices depicted a higher heat transfer compared with a smooth channel and both the heat transfer and pressure drop increased with a decrease in the porosity from L1 to L2. Steady-state conjugate numerical results revealed formation of prominent vortical structures in the inter-unit cell spaces, which diverted the flow toward the top end wall and created an asymmetric heat transfer between the two end walls. In conclusion, these lattice structures provided an augmented heat transfer while favorably redistributing the coolant within channel.

Engineering↗

Glancing angle deposition of Ge nanorod arrays on Si patterned substrates

A periodic arrangement of Ge nanorods on a Si(111) substrate was realized by glancing angle deposition (GLAD) onto honeycomb-like arranged Au hillocks formed using a self-assembled monolayer of polystyrene nanospheres as an evaporation mask. Additionally, a honeycomb-like arrangement of Au dots was used as an etch mask in a reactive ion beam etching process for pattern transfer procedure. Resulting honeycomb patterns consisting of Si hillocks within the Si(111) substrates were utilized to deposit Ge nanorods. Effective morphological variations in shape and dimension of GLAD-grown nanorods on honeycomb-like patterned substrates with both Au dot and Si dot arrays are strongly influenced by interseed distances, seed heights, and consequently shadowing lengths. For a large pattern period, it was observed that the usual triangular shape of the nanorod changed to a hexagonal shape as an effect of additional particle flux that reached the growing nanorod from the direction of second and third-nearest neighbors due to inadequate shadowing lengths and increased interseed condensation.

36 MATERIALS SCIENCE↗

Properties of reactively sputtered oxygenated cadmium sulfide (CdS:O) and their impact on CdTe solar cell performance

Oxygenated cadmium sulfide (CdS:O) is commonly used as the n-type window layer in high-performance CdTe heterojunction solar cells. This layer is deposited by reactive sputtering, but the optimal amount of oxygen in the sputtering ambient is highly dependent on the specific system and process employed. In this work, the intrinsic properties of CdS:O were measured as a function of the oxygen content (0%–10%) in the sputtering ambient and correlated to device performance with the goal of better defining optimal CdS:O properties for CdTe solar cells. Optimal performance was found using CdS:O films that contained ∼40 at. % oxygen as measured by Rutherford backscattering spectrometry. X-ray photoelectron spectroscopy confirmed these results and showed that oxygen is incorporated primarily as oxygenated sulfur compounds (SO{sub x}). Device efficiency improved from 10.5% using CdS to >14% with CdS:O due largely to increases in short-circuit current density as well as a modest improvement in open-circuit voltage. The transparency of the CdS:O films was well correlated with observed improvements in blue quantum efficiency with increasing oxygen content. The optical bandgap of as-deposited CdS:O was identified as a simple metric for process optimization and transfer, with 2.8 eV being ideal for the device architecture employed.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Dissociation Energy and Dissociative Recombination of Ne{sub 2}{sup +} and HeNe{sup +} Ions

We present the results of our study of a weakly ionized decaying helium plasma with a small admixture of neon by means of kinetic spectroscopy. The experimental conditions are a helium pressure of 10–38 Torr, an electron density [e] ≤ 2 × 10{sup 11} cm{sup –3}, and a neon density [Ne] ≤ 2 × 10{sup –4} [He]. The recombination processes of Ne{sub 2}{sup +}, He{sub 2}{sup +}, HeNe{sup +}, and Ne{sup +} ions with electrons have been identified by the decaying-plasma radiation. The neon afterglow spectrum at [e] ≤ 10{sup 11} cm{sup –3} is shown to be formed mainly by dissociative recombination of Ne{sub 2}{sup +} and HeNe{sup +} ions in the ground vibrational state v = 0. The early afterglow of a number of atomic neon lines is formed by the well-known process of excitation transfer from helium atoms in metastable states He(2{sup 3}S{sub 1}, 2{sup 1}S{sub 0}). At [e] > 10{sup 11} cm{sup –3}, the afterglow spectrum is enriched due to the collisional-radiation recombination of Ne{sup +} ions. In the recombination stage of the afterglow at room electron temperature, the existence of a clear upper bound on the excitation energy of the atomic neon levels being populated is characteristic of the dissociative recombination of both molecular ions. For Ne{sub 2}{sup +} this is the 3p{sub 1} level (in Paschen notation) with an energy of 20.369 eV, with the levels closest to Ne{sub 2}{sup +} (v = 0) in energy being 3p{sub 3} and 3p{sub 2} with energies of 20.26 and 20.3 eV, respectively; for HeNe{sup +}, this is the 5d{sub 1}{sup ′} level with an energy of about 21.02 eV. These values are proposed to be taken as the energies of Ne{sub 2}{sup +} and HeNe{sup +} ions in the ground vibrational state.

74 ATOMIC AND MOLECULAR PHYSICS↗

Electrical Properties of Intercalated Ag{sub x}MoSe{sub 2} Compounds in Constant and Alternating Fields

On intercalated Ag{sub x}MoSe{sub 2} samples, in addition to temperature measurements of the direct current electrical resistivity, measurements of the alternating current resistivity using the impedance spectroscopy technique are carried out in a wide frequency range and at different temperatures. The activation behavior of the d.c. conductivity, which increases with increasing silver content in the samples, is shown. The a.c. conductivity undergoes frequency dispersion, described by a “universal dynamic response” (UDR). It is shown that the relaxation processes during charge transfer in a variable field are accelerated with increasing silver content in the samples and with increasing temperature. The data obtained are analyzed using the models of the band and hopping conduction.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Dynamics of Spatially Inhomogeneous Spin Polarization of Nonequilibrium Conduction Electrons in Magnetic Transitions

The equation of the dynamics of the magnetic moment motion that has been averaged over the ensemble of nonequilibrium spin-injected electrons in a ferromagnetic transition in the presence of exchange interaction, interaction with an external electromagnetic field, and a thermostat has been obtained taking into account the spatial inhomogeneity of the charge carrier distribution. It has been shown that taking into account the spatial inhomogeneity of the charge carrier distribution in the equation of the dynamics of the magnetic moment motion allows for describing the various processes of electron transfer in the magnetic transition. The probability of quantum transitions of electrons with opposite spin directions, which determine spin relaxation in interaction with a thermostat, has been estimated. It has been shown that the anisotropy of the radiation medium is determined not only by the anisotropy of the sd-exchange tensor, but also by the additional anisotropy that is caused by the electron impulse derivatives of this tensor. The considered phenomena have a great potential for the detection of new effects and development of new devices based on them, including compact tunable radiation sources in the terahertz frequency range, which is obviously difficult to generate.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Phototransferred Thermoluminescence of Dosimetric α-Al{sub 2}O{sub 3} Crystals Irradiated by a Pulsed Electron Beam

The thermoluminescence (TL) of deep traps of anion-defective alumina monocrystals irradiated by a high-dose (more than 1 kGy) pulsed electron beam (130 keV) is studied. The deep traps in the studied material are classified according to the TL temperature range. It is demonstrated that the phototransferred thermoluminescence (PTTL) in the temperature range of the main TL peak is induced by optical charge migration from deep traps that are emptied at 400–470 and 470–600°C. An anomalous PTTL enhancement in crystals subjected to stepped annealing in the 350–400°C interval is observed. It is demonstrated that this effect may be caused by competing processes of charge transfer that involve deep traps corresponding to the TL peak at 390°C. The applicability of PTTL in the dosimetry of high-dose (1–50 kGy) pulsed electron beams is established.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗