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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 1,729 records · Page 96
All sourcesNASA NTRSDOE OSTI
DOE OSTI2025

Modification and analysis of context-specific genome-scale metabolic models: methane-utilizing microbial chassis as a case study

ABSTRACT Context-specific genome-scale model (CS-GSM) reconstruction is becoming an efficient strategy for integrating and cross-comparing experimental multi-scale data to explore the relationship between cellular genotypes, facilitating fundamental or applied research discoveries. However, the application of CS modeling for non-conventional microbes is still challenging. Here, we present a graphical user interface that integrates COBRApy, EscherPy, and RIPTiDe, Python-based tools within the BioUML platform, and streamlines the reconstruction and interrogation of the CS genome-scale metabolic frameworks via Jupyter Notebook. The approach was tested using -omics data collected for Methylotuvimicrobium alcaliphilum 20Z R , a prominent microbial chassis for methane capturing and valorization. We optimized the previously reconstructed whole genome-scale metabolic network by adjusting the flux distribution using gene expression data. The outputs of the automatically reconstructed CS metabolic network were comparable to manually optimized i IA409 models for Ca-growth conditions. However, the CS model questions the reversibility of the phosphoketolase pathway and suggests higher flux via primary oxidation pathways. The model also highlighted unresolved carbon partitioning between assimilatory and catabolic pathways at the formaldehyde-formate node. Only a very few genes and only one enzyme with a predicted function in C1 metabolism, a homolog of the formaldehyde oxidation enzyme ( fae1-2 ), showed a significant change in expression in La-growth conditions. The CS-GSM predictions agreed with the experimental measurements under the assumption that the Fae1-2 is a part of the tetrahydrofolate-linked pathway. The cellular roles of the tungsten (W)-dependent formate dehydrogenase ( fdhAB ) and fae homologs ( fae1-2 and fae3 ) were investigated via mutagenesis. The phenotype of the f dhAB mutant followed the model prediction. Furthermore, a more significant reduction of the biomass yield was observed during growth in La-supplemented media, confirming a higher flux through formate. M. alcaliphilum 20Z R mutants lacking fae1-2 did not display any significant defects in methane or methanol-dependent growth. However, contrary to fae1, the fae1-2 homolog failed to restore the formaldehyde-activating enzyme function in complementation tests. Overall, the presented data suggest that the developed computational workflow supports the reconstruction and validation of CS-GSM networks of non-model microbes. IMPORTANCE The interrogation of various types of data is a routine strategy to explore the relationship between genotype and phenotype. An efficient approach for integrating and cross-comparing experimental multi-scale data in the context of whole-genome-based metabolic network reconstruction becomes a powerful tool that facilitates fundamental and applied research discoveries. The present study describes the reconstruction of a context-specific (CS) model for the methane-utilizing bacterium, Methylotuvimicrobium alcaliphilum 20Z R . M. alcaliphilum 20Z R is becoming an attractive microbial platform for the production of biofuels, chemicals, pharmaceuticals, and bio-sorbents for capturing atmospheric methane. We demonstrate that this pipeline can help reconstruct metabolic models that are similar to manually curated networks. Furthermore, the model is able to highlight previously overlooked pathways, thus advancing fundamental knowledge of non-model microbial systems or promoting their development toward biotechnological or environmental implementations.

Kulyashov, M. A.↗
DOE OSTI2016

Analysis of Monolith Cores from an Engineering Scale Demonstration of a Prospective Cast Stone Process

The primary disposition path of Low Activity Waste (LAW) at the DOE Hanford Site is vitrification. A cementitious waste form is one of the alternatives being considered for the supplemental immobilization of the LAW that will not be treated by the primary vitrification facility. Washington River Protection Solutions (WRPS) has been directed to generate and collect data on cementitious or pozzolanic waste forms such as Cast Stone. This report documents the coring and leach testing of monolithic samples cored from an engineering-scale demonstration (ES Demo) with non-radioactive simulants. The ES Demo was performed at SRNL in October of 2013 using the Scaled Continuous Processing Facility (SCPF) to fill an 8.5 ft. diameter x 3.25 ft. high container with simulated Cast Stone grout. The Cast Stone formulation was chosen from the previous screening tests. Legacy salt solution from previous Hanford salt waste testing was adjusted to correspond to the average LAW composition generated from the Hanford Tank Waste Operation Simulator (HTWOS). The dry blend materials, ordinary portland cement (OPC), Class F fly ash, and ground granulated blast furnace slag (GGBFS or BFS), were obtained from Lafarge North America in Pasco, WA. In 2014 core samples originally obtained approximately six months after filling the ES Demo were tested along with bench scale molded samples that were collected during the original pour. A latter set of core samples were obtained in late March of 2015, eighteen months after completion of the original ES Demo. Core samples were obtained using a 2” diameter x 11” long coring bit. The ES Demo was sampled in three different regions consisting of an outer ring, a middle ring and an inner core zone. Cores from these three lateral zones were further segregated into upper, middle and lower vertical segments. Monolithic core samples were tested using the Environmental Protection Agency (EPA) Method 1315, which is designed to provide mass transfer rates (release rates) of inorganic analytes contained in monolithic material under diffusion controlled release conditions as a function of leaching time. Compressive strength measurements and drying tests were also performed on the 2015 samples. Leachability indices reported are based on analyte concentrations determined from dissolution of the dried samples.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗
DOE OSTI2022

Appalachian Hydrogen Infrastructure Analysis

As large-scale efforts to decarbonize the global economy ramp up in earnest, hydrogen is being positioned as a critical solution for numerous sectors. Hydrogen produced from fossil energy resources with carbon capture and storage (CCS) is viewed as a bridge in the clean energy transition, enabling the development of midstream infrastructure and downstream demand. This report highlights the potential for the Appalachian region to develop a hydrogen economy with fossil-derived hydrogen with CCS production (hydrogen from natural gas with carbon capture and storage). Specifically, the report provides hydrogen transport and storage infrastructure pathways in support of a broader hydrogen economy. These pathways are consistent with existing and potential technologies and regulations and provide valuable guidance for the investment and research and development potential for transportation and storage of hydrogen in Appalachia.

08 HYDROGEN↗
DOE OSTI2022

Paraxial, Thin-Lens Analysis of Fixed-Tune, Non-Scaling FFAs with Two Magnets per Cell

Fixed-field accelerators (FFAs) have closed orbits that change as a function of beam momentum. It is sometimes useful to avoid various resonances by keeping the tunes constant as these orbits change. A well-known example is the scaling FFA where the entire beam orbit and optics are geometrically scaled as a function of momentum. However, this is stricter than necessary: cells with three or more lenses can have fixed tunes even when the focussing strengths in the lenses change. Recently, Dejan Trbojevic has found a pair of nonlinear magnets that produce fixed tunes and fixed beta functions while not being a scaling FFA. This improves on a more approximate solution in. Notably a scaling FFA would require one magnet to be entirely reverse-bending, whereas the Trbojevic solution does not do this and instead resembles an intermediate point between the traditional scaling field profiles and the nonscaling profiles centred around a momentum with equal and positive fields. This suggests there are at least three levels of stringency that one can apply to a fixed-tune FFA design: 1. Fixed cell tunes (in both planes) as a function of momentum; 2. Fixed optics (beta functions) as a function of momentum; 3. Similarity of all orbits via a scaling symmetry law ↔ traditional scaling FFA. This note studies the interesting case #2 above (#3 being fully characterised by the orbit at a single energy) in the simplest possible example: a cell of two thin lenses in the small angle (paraxial) approximation.

43 PARTICLE ACCELERATORS↗
NASA NTRS1981

Spectral analysis and diagnosis of nonlinear interactions of large-scale moving waves at 200 mb in the GLAS General Circulation Model

The space-time Fourier spectral analysis and the equations of kinetic energy and momentum transport in the wavenumber-frequency domain proposed by Kao (1968) and modified by Kao and Lee (1977) using Tukey's (1967) numerical spectral analysis are employed to analyze the 200 mb wind fields of a four-month climate experiment of the GLAS atmospheric circulation model. This climate run covers the period from Jan. 1 to Apr. 30, 1975. The current study analyzes a 90-day (Jan. 15-Apr. 14, 1975) wind field of this climate run. A comparison is conducted between the current study and observations reported by Kao and Lee. It is found that the 200 mb latitudinal distributions of model mean zonal wind, zonal and meridional kinetic energy and momentum transport of eddies agree fairly well with the observations.

Chen, T.-C.↗
NASA NTRS1987

Helicopter blade-vortex interaction locations: Scale-model acoustics and free-wake analysis results

The results of a model rotor acoustic test in the Langley 4by 7-Meter Tunnel are used to evaluate a free-wake analytical technique. An acoustic triangulation technique is used to locate the position in the rotor disk where the blade-vortex interaction noise originates. These locations, along with results of the rotor free-wake analysis, are used to define the geometry of the blade-vortex interaction noise phenomena as well as to determine if the free-wake analysis is a capable diagnostic tool. Data from tests of two teetering rotor systems are used in these analyses.

Hoad, Danny R.↗
NASA NTRS1987

Diffuse infrared emission of the galaxy: Large scale properties

A quantitative analysis of Infrared Astronomy Satellite (IRAS) data in the galactic plane shows that: about 66% of the power radiated in the 100 micron band comes from the diffuse medium, the other 33% coming from well identified luminous sources. The diffuse emission has almost constant colors throughout the Galaxy, similar to the local cirrus colors. The sources have a much lower 12 micron/25 micron and a much high 60 micron/100 micron emission ratio than the diffuse component, giving a very striking anticorrelation in the color-color diagrams. The separation between one narrow and a second broader component shows that the molecular component does not provide much more than one half of the diffuse emission in the molecular ring: this implies a 4 pi nuI(nu) emissivity at 100 microns for the atomic component of about 2.4 x 10 to the minus 30th watts per H atom, 10 times higher than the emissivity of the molecular component at the same galactocentric radius. The atomic component emissivity measures the interstellar radiation field density. The temperature distribution of the 2 components is discussed comparing IRAS data with measures of the 900 micron emission of the galactic plane, which appears to be dominated by cold dust in the narrow component.

Puget, J. L.↗
NASA NTRS1992

An analysis of differential impact melt-crater scaling and implications for the terrestrial impact record

The volume of impact melt relative to that of the transient cavity is known to increase with the magnitude of the impact event. This paper investigates the influence of that phenomenon on the nature of terrestrial impact craters. A model of impact melting was used to estimate the volume of melt produced during the impact of chondritic projectiles into granite targets at velocities of 15, 25, and 50 km per sec. The results were compared with observed melt volumes at terrestrial craters, which were collated from the literature and paired with the transient-cavity diameters of their respective craters. Results show that the record on terrestrial craters is not inconsistent with the predictions of the model.

Grieve, R. A. F.↗
DOE OSTI2013

Focused Belief Measures for Uncertainty Quantification in High Performance Semantic Analysis

In web-scale semantic data analytics there is a great need for methods which aggregate uncertainty claims, on the one hand respecting the information provided as accurately as possible, while on the other still being tractable. Traditional statistical methods are more robust, but only represent distributional, additive uncertainty. Generalized information theory methods, including fuzzy systems and Dempster-Shafer (DS) evidence theory, represent multiple forms of uncertainty, but are computationally and methodologically difficult. We require methods which provide an effective balance between the complete representation of the full complexity of uncertainty claims in their interaction, while satisfying the needs of both computational complexity and human cognition. Here we build on J{\o}sang's subjective logic to posit methods in focused belief measures (FBMs), where a full DS structure is focused to a single event. The resulting ternary logical structure is posited to be able to capture the minimal amount of generalized complexity needed at a maximum of computational efficiency. We demonstrate the efficacy of this approach in a web ingest experiment over the 2012 Billion Triple dataset from the Semantic Web Challenge.

belief↗
NASA NTRS1978

Recent advances in thermal-structural analysis and design

A continuing effort to develop a comprehensive capability for thermal-structural analysis and automated design (sizing) is reviewed. A principal role in the activity is played by the finite element program SPAR which contains both an efficient structural and thermal analysis capability. The benefit of having thermal and structural analyses in the same finite element program is illustrated by the application of SPAR to design calculations for the National Transonic Facility - a cryogenic wind tunnel under construction at Langley. Some experience with large-scale thermal structural analysis problems, particularly the space shuttle orbiter, has led to the identification of some analysis needs. Those needs include automated model generation and data output for lumped parameter thermal analysis, faster solution methods for nonlinear transient heat transfer, automated interpolation of temperature data from a thermal finite element model to a dissimilar structural finite model, and automated techniques to identify the times at which the critical combinations of transient heating and loads occur on a structure.

Adelman, H. M.↗