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Differential correction technique for removing common errors in gas filter radiometer measurements

The Measurement of Air Pollution from Satellites (MAPS) gas filter radiometer experiment was designed to measure CO mixing ratios in the earth's atmosphere. MAPS also measures N2O to provide a reference channel for the atmospheric emitting temperature and to detect the presence of clouds. In this paper we formulate equations to correct the radiometric signals based on the spatial and temporal uniformity of the N2O mixing ratio in the atmosphere. Results of an error study demonstrate that these equations reduce the error in inferred CO mixing ratios. Subsequent application of the technique to the MAPS 1984 data set decreases the error in the frequency distribution of mixing ratios and increases the number of usable data points.

Wallio, H. A.↗

Applying AI tools to operational space environmental analysis

The U.S. Air Force and National Oceanic Atmospheric Agency (NOAA) space environmental operations centers are facing increasingly complex challenges meeting the needs of their growing user community. These centers provide current space environmental information and short term forecasts of geomagnetic activity. Recent advances in modeling and data access have provided sophisticated tools for making accurate and timely forecasts, but have introduced new problems associated with handling and analyzing large quantities of complex data. AI (Artificial Intelligence) techniques have been considered as potential solutions to some of these problems. Fielding AI systems has proven more difficult than expected, in part because of operational constraints. Using systems which have been demonstrated successfully in the operational environment will provide a basis for a useful data fusion and analysis capability. Our approach uses a general purpose AI system already in operational use within the military intelligence community, called the Temporal Analysis System (TAS). TAS is an operational suite of tools supporting data processing, data visualization, historical analysis, situation assessment and predictive analysis. TAS includes expert system tools to analyze incoming events for indications of particular situations and predicts future activity. The expert system operates on a knowledge base of temporal patterns encoded using a knowledge representation called Temporal Transition Models (TTM's) and an event database maintained by the other TAS tools. The system also includes a robust knowledge acquisition and maintenance tool for creating TTM's using a graphical specification language. The ability to manipulate TTM's in a graphical format gives non-computer specialists an intuitive way of accessing and editing the knowledge base. To support space environmental analyses, we used TAS's ability to define domain specific event analysis abstractions. The prototype system defines events covering reports of natural phenomena such as solar flares, bursts, geomagnetic storms, and five others pertinent to space environmental analysis. With our preliminary event definitions we experimented with TAS's support for temporal pattern analysis using X-ray flare and geomagnetic storm forecasts as case studies. We are currently working on a framework for integrating advanced graphics and space environmental models into this analytical environment.

Krajnak, Mike↗

Lightning and Other Influences On Tropical Tropospheric Ozone: Empirical Studies of Covariation

Tropical and subtropical tropospheric ozone are important radiatively active species, with particularly large effects in the upper third of the troposphere. Temporal variability of O3 has proved difficult to simulate day by day in process models. Thus, individual roles of lightning, biomass burning, and other pollution in providing precursor NO(x), radicals, and chain carriers (CO, hydrocarbons) remain unquantified by simulation, and it is theoretically reasonable that individual roles are magnified by a joint synergy. We use wavelet analysis and Burg-algorithm maximum entropy spectral analyses to describe time-scales and correlation of ozone with proxies for processes controlling its concentration. Our empirical studies link time variations apparent in several datasets: the SHADOZ (Southern Hemisphere Additional Ozonesondes) network stations (Nairobi, Fiji), and auxiliary series with power to explain ozone-determining processes, with some interpretation based on the TTO (Tropical Tropospheric Ozone) product derived from TOMS (the Total Ozone Mapping Spectrometer). The auxiliary series are The OTD/LIS(Optical Transient Detector/Lightning Imaging Sensor) measurements of the lightning NO(x) source, the OLR (Outgoing Longwave Radiation)measurement of high-topped clouds, and standard meteorological variables from the United States NCEP (National Centers for Environmental Prediction) and Data Assimilation Office analyses. Concentrating on equatorial ozone, we compare the statistical evidence on the variability of tropospheric ozone. Important variations occur on approximately two-week, two-month (Madden-Julian Oscillation) and annual scales, and relations with OLR suggest controls associated with continental clouds. Hence we are now using the Lightning Imaging Sensor data set to indicate NO(x) sources. We report initial results defining relative roles of the process mentioned affecting O3 using their covariance properties.

Chatfield, Robert B.↗

Arctic Warming Signals from Satellite Observations

Global warming signals are expected to be amplified in the Arctic primarily because of ice-albedo feedback associated with the high reflectivity of ice and snow that blankets much of the region. The Arctic had been a poorly explored territory basically because of its general inaccessibility on account of extremely harsh weather conditions and the dominant presence of thick perennial ice in the region. The advent of satellite remote sensing systems since the 1960s, however, enabled the acquisition of synoptic data that depict in good spatial detail the temporal changes of many Arctic surface parameters. Among the surface parameters that have been studied using space based systems are surface temperature, sea ice concentration, snow cover, surface albedo and phytoplankton concentration. Associated atmospheric parameters, such as cloud cover, temperature profile, ozone concentration, and aerosol have also been derived. Recent observational and phenomenological studies have indeed revealed progressively changing conditions in the Arctic during the last few decades (e g , Walsh et al. 1996; Serreze et al 2000; Comiso and Parkinson 2004). The changes included declines in the extent and area of surfaces covered by sea ice and snow, increases in melt area over the Greenland ice sheets, thawing of the permafrost, warming in the troposphere, and retreat of the glaciers. These observations are consistent with the observed global warming that has been associated with the increasing concentration of greenhouse gases in the atmosphere (Karl and Trenberth 2003) and confirmed by modeling studies (Holland and Bitz, 2003). The Arctic system, however, is still not well understood complicated by a largely fluctuating wind circulation and atmospheric conditions (Proshutinsky and Johnson 1997) and controlled by what is now known as the Arctic Oscillation (AO) which provides a measure of the strength of atmospheric activities in the region (Thompson and Wallace 1998). Meanwhile, the observed Arctic conditions since the 1970s have been shown to exhibit a linear behavior that directly contradicts what has been expected from the A0 (Overland, 2005). The decade of the 1990s has been regarded as the warmest decade in the last century and current data indicates that the 2000s may be even a warmer decade than the 1990s further supporting the linear variability. In this paper, we use satellite data to gain insights into the warming Arctic and how the abnormally warm conditions during the last few years are reflected in the region.

Comiso, Josefino C.↗

'Towers in the Tempest' Computer Animation Submission

The following describes a computer animation that has been submitted to the ACM/SIGGRAPH 2008 computer graphics conference: 'Towers in the Tempest' clearly communicates recent scientific research into how hurricanes intensify. This intensification can be caused by a phenomenon called a 'hot tower.' For the first time, research meteorologists have run complex atmospheric simulations at a very fine temporal resolution of 3 minutes. Combining this simulation data with satellite observations enables detailed study of 'hot towers.' The science of 'hot towers' is described using: satellite observation data, conceptual illustrations, and a volumetric atmospheric simulation data. The movie starts by showing a 'hot tower' observed by NASA's Tropical Rainfall Measuring Mission (TRMM) spacecraft's three dimensional precipitation radar data of Hurricane Bonnie. Next, the dynamics of a hurricane and the formation of 'hot towers' are briefly explained using conceptual illustrations. Finally, volumetric cloud, wind, and vorticity data from a supercomputer simulation of Hurricane Bonnie are shown using volume techniques such as ray marching.

Shirah, Greg↗

Satellite Proving Ground for the GOES-R Geostationary Lightning Mapper (GLM)

The key mission of the Satellite Proving Ground is to demonstrate new satellite observing data, products and capabilities in the operational environment to be ready on Day 1 to use the GOES-R suite of measurements. Algorithms, tools, and techniques must be tested, validated, and assessed by end users for their utility before they are finalized and incorporated into forecast operations. The GOES-R Proving Ground for the Geostationary Lightning Mapper (GLM) focuses on evaluating how the infusion of the new technology, algorithms, decision aids, or tailored products integrate with other available tools (weather radar and ground strike networks; nowcasting systems, mesoscale analysis, and numerical weather prediction models) in the hands of the forecaster responsible for issuing forecasts and warning products. Additionally, the testing concept fosters operation and development staff interactions which will improve training materials and support documentation development. Real-time proxy total lightning data from regional VHF lightning mapping arrays (LMA) in Northern Alabama, Central Oklahoma, Cape Canaveral Florida, and the Washington, DC Greater Metropolitan Area are the cornerstone for the GLM Proving Ground. The proxy data will simulate the 8 km Event, Group and Flash data that will be generated by GLM. Tailored products such as total flash density at 1-2 minute intervals will be provided for display in AWIPS-2 to select NWS forecast offices and national centers such as the Storm Prediction Center. Additional temporal / spatial combinations are being investigated in coordination with operational needs and case-study proxy data and prototype visualizations may also be generated from the NASA heritage Lightning Imaging Sensor and Optical Transient Detector data. End users will provide feedback on the utility of products in their operational environment, identify use cases and spatial/temporal scales of interest, and provide feedback to the developers for adjusted or new products.

Goodman, Steven J.↗

Implementation of an Analytical Raman Scattering Correction for Satellite Ocean-Color Processing

Raman scattering of photons by seawater molecules is an inelastic scattering process. This effect can contribute significantly to the water-leaving radiance signal observed by space-borne ocean-color spectroradiometers. If not accounted for during ocean-color processing, Raman scattering can cause biases in derived inherent optical properties (IOPs). Here we describe a Raman scattering correction (RSC) algorithm that has been integrated within NASA's standard ocean-color processing software. We tested the RSC with NASA's Generalized Inherent Optical Properties algorithm (GIOP). A comparison between derived IOPs and in situ data revealed that the magnitude of the derived backscattering coefficient and the phytoplankton absorption coefficient were reduced when the RSC was applied, whilst the absorption coefficient of colored dissolved and detrital matter remained unchanged. Importantly, our results show that the RSC did not degrade the retrieval skill of the GIOP. In addition, a timeseries study of oligotrophic waters near Bermuda showed that the RSC did not introduce unwanted temporal trends or artifacts into derived IOPs.

SeaDAS↗

Analysis of Summer-Time Ozone and Precursor Species in the Southeast United States

Ozone (O3) is a greenhouse gas and toxic pollutant which plays a major role in air quality and atmospheric chemistry. The understanding and ability to model the horizontal and vertical structure of O3 mixing ratios is difficult due to the complex formation/destruction processes and transport pathways that cause large variability of O3. The Environmental Protection Agency has National Ambient Air Quality Standards for O3 set at 75 ppb with future standards proposed to be as low as 65 ppb. These lower values emphasize the need to better understand/simulate the transport processes, emission sources, and chemical processes controlling precursor species (e.g., NOx, VOCs, and CO) which influence O3 mixing ratios. The uncertainty of these controlling variables is particularly large in the southeast United States (US) which is a region impacted by multiple different emission sources of precursor species (anthropogenic and biogenic) and transport processes resulting in complex spatio-temporal O3 patterns. During this work we will evaluate O3 and precursor species in the southeast US applying models, ground-based and airborne in situ data, and lidar observations. In the summer of 2013, the UAH O3 Differential Absorption Lidar (DIAL) (part of the Tropospheric Ozone Lidar Network (TOLNet)) measured vertical O3 profiles from the surface up to approximately 12 km. During this period, the lidar observed numerous periods of dynamic temporal and vertical O3 structures. In order to determine the sources/processes impacting these O3 mixing ratios we will apply the CTM GEOS-Chem (v9-02) at a 0.25 deg x 0.3125 deg resolution. Using in situ ground-based (e.g., SEARCH Network, CASTNET), airborne (e.g., NOAA WP-3D - SENEX 2013, DC-8 - SEAC4RS), and TOLNet lidar data we will first evaluate the model to determine the capability of GEOS-Chem to simulate the spatio-temporal variability of O3 in the southeast US. Secondly, we will perform model sensitivity studies in order to quantify which emission sources (e.g., anthropogenic, biogenic, lighting, wildfire) and transport processes (e.g., stratospheric, long-range, local scale) are contributing to these TOLNet-observed dynamic O3 patterns. Results from the evaluation of the model and the study of sources/processes impacting observed O3 mixing ratios will be presented.

Optical Radar↗

The Characterization of a DIRSIG Simulation Environment to Support the Inter-Calibration of Spaceborne Sensors

Climate change studies require long-term, continuous records that extend beyond the lifetime, and the temporal resolution, of a single remote sensing satellite sensor. The inter-calibration of spaceborne sensors is therefore desired to provide spatially, spectrally, and temporally homogeneous datasets. The Digital Imaging and Remote Sensing Image Generation (DIRSIG) tool is a first principle-based synthetic image generation model that has the potential to characterize the parameters that impact the accuracy of the inter-calibration of spaceborne sensors. To demonstrate the potential utility of the model, we compare the radiance observed in real image data to the radiance observed in simulated image from DIRSIG. In the present work, a synthetic landscape of the Algodones Sand Dunes System is created. The terrain is facetized using a 2-meter digital elevation model generated from NASA Goddard's LiDAR, Hyperspectral, and Thermal (G-LiHT) imager. The material spectra are assigned using hyperspectral measurements of sand collected from the Algodones Sand Dunes System. Lastly, the bidirectional reflectance distribution function (BRDF) properties are assigned to the modeled terrain using the Moderate Resolution Imaging Spectroradiometer (MODIS) BRDF product in conjunction with DIRSIG's Ross-Li capability. The results of this work indicate that DIRSIG is in good agreement with real image data. The potential sources of residual error are identified and the possibilities for future work are discussed..

Ambeau, Brittany L.↗

The Sensitivity of Ground-Reflected GNSS Signals to Near-Surface Soil Moisture, as Recorded by Spaceborne Receivers

Spatial and temporal variations in near-surface soil moisture are important to measure for climate studies, numerical weather forecasts, and drought monitoring. Several previous studies have shown success in using ground-reflected Global Navigation Satellite System (GNSS) signals as a form of bistatic radar to sense soil moisture. However, the ability of this type of data to sense soil moisture variations from space is still a nascent field of study. In the past two years, three satellites have been launched that were either designed to capture ground-reflected GNSS signals or have been modified to record these signals. The data provided by these satellites are giving scientists an unprecedented opportunity to investigate their ability to detect changes in Earth’s land surface, including but certainly not limited to near-surface soil moisture. This paper will present spaceborne observations of ground-reflected GNSS signals and evaluate their sensitivity to near-surface soil moisture. This sensitivity will be compared to empirical and theoretical sensitivities of monostatic L-band radar measurements to soil moisture. We will also comment on possibilities for retrieval algorithm development, using techniques employed for monostatic radar as a guide.

Chew, C.↗

Assimilated Hydrological Data at NASA GES DISC with Examples of Extreme Events

Extreme weather and climate events, such as heavy rainfall, heatwave, floods and droughts, and strong wind, can have devastating impacts on society. NASA and NOAA, based on independent analyses, recently announced that global surface temperatures in 2018 are the fourth warmest since 1880, behind only those of 2016, 2017, and 2015 (nasa.gov). Also in 2018, the United States experienced 14 billion-dollar disasters, ranking as the fourth highest total number of such events, behind only the years 2017, 2011, and 2016 (climate.gov). Many research studies have focused on acquiring observational and modeling data, to reveal linkages between increasing extreme events, global water and energy cycle, and global climate change. However, draw conclusions is still a challenge. NASA Goddard Earth Sciences Data and Information Services Center is one of twelve NASA Earth Observing System (EOS) data centers that process, archive, document, and distribute data from Earth science missions and related projects. The GES DISC hosts a wide range of remotely-sensed and model data and provides reliable and robust data access and services to users worldwide. This presentation provides a few examples of extreme event study that use Land Surface Model (LSM) assimilated, quality-controlled, and spatially and temporally consistent, hydrological data from the GES DISC. Also provided is a summary table for the hydrological data holdings, along with discussions of recent updates to data and data services.

Rui, Hualan↗

Particle acceleration and plasma energization in substorms: MHD and test particle studies

The author organizes his slide presentation under the following topics: background, MHD simulation, orbit integration, typical orbits, spatial and temporal features, acceleration mechanisms, source locations, and source energies. Field-­aligned energetic particle fluxes are shown for 45-keV electrons and 80-keV protons. It is concluded that the onset from local thin current sheet is electron tearing. Acceleration is mainly from field collapse, governed by E y = -v x XB z : importance of localization; betatron acceleration (similar if nonadiabatic); 1st order Fermi, type B (or A; current sheet acceleration). There are two source regions (of comparable importance in magnetotail): - flanks, inner tail - drift entry - early, higher energy - outer plasma sheet - reconnection entry - later, lower energy. Both thermal and suprathermal sources are important, with limited energy range for acceleration

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

An Inventory of AI-ready Benchmark Data for US Fires, Heatwaves, and Droughts

Extreme weather events, including fires, heatwaves, and droughts, have significant impacts on earth, environmental, and energy systems. Mechanistic and predictive understanding, as well as probabilistic risk assessment of these extreme weather events, are crucial for detecting, planning for, and responding to these extremes. Records of extreme weather events provide an important data source for understanding present and future extremes, but the existing data needs preprocessing before it can be used for analysis. Moreover, there are many nonstandard metrics defining the levels of severity or impacts of extremes. In this study, we compile a comprehensive benchmark data inventory of extreme weather events, including fires, heatwaves, and droughts. The dataset covers the period from 2001 to 2020 with a daily temporal resolution and a spatial resolution of 0.5°×0.5° (~55km×55km) over the continental United States (CONUS), and a spatial resolution of 1km × 1km over the Pacific Northwest (PNW) region, together with the co-located and relevant meteorological variables. By exploring and summarizing the spatial and temporal patterns of these extremes in various forms of marginal, conditional, and joint probability distributions, we gain a better understanding of the characteristics of climate extremes. The resulting AI/ML-ready data products can be readily applied to ML-based research, fostering and encouraging AI/ML research in the field of extreme weather. This study can contribute significantly to the advancement of extreme weather research, aiding researchers, policymakers, and practitioners in developing improved preparedness and response strategies to protect communities and ecosystems from the adverse impacts of extreme weather events. Usage Notes We presented a long term (2001-2020) and comprehensive data inventory of historical extreme events with daily temporal resolution covering the separate spatial extents of CONUS (0.5°×0.5°) and PNW(1km×1km) for various applications and studies. The dataset with 0.5°×0.5° resolution for CONUS can be used to help build more accurate climate models for the entire CONUS, which can help in understanding long-term climate trends, including changes in the frequency and intensity of extreme events, predicting future extreme events as well as understanding the implications of extreme events on society and the environment. The data can also be applied for risk accessment of the extremes. For example, ML/AI models can be developed to predict wildfire risk or forecast HWs by analyzing historical weather data, and past fires or heateave , allowing for early warnings and risk mitigation strategies. Using this dataset, AI-driven risk assessment models can also be built to identify vulnerable energy and utilities infrastructure, imrpove grid resilience and suggest adaptations to withstand extreme weather events. The high-resolution 1km×1km dataset ove PNW are advantageous for real-time, localized and detailed applications. It can enhance the accuracy of early warning systems for extreme weather events, helping authorities and communities prepare for and respond to disasters more effectively. For example, ML models can be developed to provide localized HW predictions for specific neighborhoods or cities, enabling residents and local emergency services to take targeted actions; the assessment of drought severity in specific communities or watersheds within the PNW can help local authorities manage water resources more effectively.

Lin, Xinming↗

SU-F-J-20: Commissioning and Acceptance Testing of the C-Rad CatalystHD Surface Imaging System

Introduction: With the increasing use of surface-based, nonionizing image-guided radiotherapy (IGRT) systems, a comprehensive set of clinical acceptance and commissioning procedures are needed to ensure correct functionality and proper clinical integration. Although TG-147 provides a specific set of parameters, measurement methodologies have yet to be described. The aim of this study was to provide a comprehensive overview of the commissioning and acceptance analysis performed for the C-Rad CatalystHD imaging system. Methods and Materials: Methodology for the commissioning and acceptance of the C-Rad CatalystHD imaging system was developed using commercially available clinical equipment. Following TG-147 guidelines, the following tests were performed: integration of peripheral equipment, system drift, static spatial reproducibility and localization accuracy, static end-to-end analysis, static rotational accuracy, dynamic spatial accuracy, dynamic temporal accuracy, dynamic radiation delivery and a comprehensive end-to-end analysis. Results: The field of view (FOV) of the CatalystHD was 105×109×83 cm3 in the lateral, longitudinal and vertical directions. For thermal equilibrium and system drift, a thermal drift of 1.0mm was noted. A 45 min warmup time is recommended if the system has been shut off an extended period of time (>24 hours) before the QA procedure to eliminate any thermal drift. Spatial reproducibility was found to be 0.05±0.03 mm using a rigid phantom. For the static localization accuracy, system agreement with couch shifts was within 0.1±0.1 mm and positioning agreement with kV-CBCT was 0.16±0.10 mm. For static rotational accuracy, system agreement with a high precision rotational stage (0.01 deg precision) was within 0.10±0.07 deg. Dynamic spatial and temporal localization accuracy was found to be within 0.2±0.1 mm. Conclusion: A comprehensive commissioning and acceptance study was performed using commercially available phantoms and in-house methodologies to provide a performance evaluation of the CatalystHD imaging system.

60 APPLIED LIFE SCIENCES↗

Pursuit Latency for Chromatic Targets

The temporal dynamics of eye movement response to a change in direction of stimulus motion has been used to compare the processing speeds of different types of stimuli (Mulligan, ARVO '97). In this study, the pursuit response to colored targets was measured to test the hypothesis that the slow response of the chromatic system (as measured using traditional temporal sensitivity measures such as contrast sensitivity) results in increased eye movement latencies. Subjects viewed a small (0.4 deg) Gaussian spot which moved downward at a speed of 6.6 deg/sec. At a variable time during the trajectory, the dot's direction of motion changed by 30 degrees, either to the right or left. Subjects were instructed to pursue the spot. Eye movements were measured using a video ophthalmoscope with an angular resolution of approximately 1 arc min and a temporal sampling rate of 60 Hz. Stimuli were modulated in chrominance for a variety of hue directions, combined with a range of small luminance increments and decrements, to insure that some of the stimuli fell in the subjects' equiluminance planes. The smooth portions of the resulting eye movement traces were fit by convolving the stimulus velocity with an exponential having variable onset latency, time constant and amplitude. Smooth eye movements with few saccades were observed for all stimuli. Pursuit responses to stimuli having a significant luminance component are well-fit by exponentials having latencies and time constants on the order of 100 msec. Increases in pursuit response latency on the order of 100-200 msec are observed in response to certain stimuli, which occur in pairs of complementary hues, corresponding to the intersection of the stimulus section with the subjects' equiluminant plane. Smooth eye movements can be made in response to purely chromatic stimuli, but are slower than responses to stimuli with a luminance component.

Mulligan, Jeffrey B.↗

Large Scale Turbulent Structures in Supersonic Jets

Jet noise is a major concern in the design of commercial aircraft. Studies by various researchers suggest that aerodynamic noise is a major contributor to jet noise. Some of these studies indicate that most of the aerodynamic jet noise due to turbulent mixing occurs when there is a rapid variation in turbulent structure, i.e. rapidly growing or decaying vortices. The objective of this research was to simulate a compressible round jet to study the non-linear evolution of vortices and the resulting acoustic radiations. In particular, to understand the effect of turbulence structure on the noise. An ideal technique to study this problem is Direct Numerical Simulations(DNS), because it provides precise control on the initial and boundary conditions that lead to the turbulent structures studied. It also provides complete 3-dimensional time dependent data. Since the dynamics of a temporally evolving jet are not greatly different from those, of a spatially evolving jet, a temporal jet problem was solved, using periodicity ill the direction of the jet axis. This enables the application of Fourier spectral methods in the streamwise direction. Physically this means that turbulent structures in the jet are repeated in successive downstream cells instead of being gradually modified downstream into a jet plume. The DNS jet simulation helps us understand the various turbulent scales and mechanisms of turbulence generation in the evolution of a compressible round jet. These accurate flow solutions will be used in future research to estimate near-field acoustic radiation by computing the total outward flux across a surface and determine how it is related to the evolution of the turbulent solutions. Furthermore, these simulations allow us to investigate the sensitivity of acoustic radiations to inlet/boundary conditions, with possible application to active noise suppression. In addition, the data generated can be used to compute various turbulence quantities such as mean velocities, turbulent stresses, etc. which will aid in turbulence modeling. This report will be presented in two chapters. The first chapter describes some work on the linear stability of a supersonic round jet and the implications of this for the jet noise problem. The second chapter is an extensive discussion of numerical work using the spectral method which we use to solve the compressible Navier-Stokes equations to study turbulent jet flows. The method uses Fourier expansions in the azimuthal and streamwise direction and a 1-D B-spline basis representation in the radial direction. The B-spline basis is locally supported and this ensures block diagonal matrix equations which can be solved in O(N) steps. This is a modification of a boundary layer code developed by Robert Moser. A very accurate highly resolved Direct Numerical Simulation (DNS) of a turbulent jet flow is produced.

Rao, Ram Mohan↗

An on-demand, drop-on-drop method for studying enzyme catalysis by serial crystallography

Serial femtosecond crystallography has opened up many new opportunities in structural biology. In recent years, several approaches employing light-inducible systems have emerged to enable time-resolved experiments that reveal protein dynamics at high atomic and temporal resolutions. However, very few enzymes are light-dependent, whereas macromolecules requiring ligand diffusion into an active site are ubiquitous. In this work we present a drop-on-drop sample delivery system that enables the study of enzyme-catalyzed reactions in microcrystal slurries. The system delivers ligand solutions in bursts of multiple picoliter-sized drops on top of a larger crystal-containing drop inducing turbulent mixing and transports the mixture to the X-ray interaction region with temporal resolution. We demonstrate mixing using fluorescent dyes, numerical simulations and time-resolved serial femtosecond crystallography, which show rapid ligand diffusion through microdroplets. The drop-on-drop method has the potential to be widely applicable to serial crystallography studies, particularly of enzyme reactions with small molecule substrates.

59 BASIC BIOLOGICAL SCIENCES↗

Large Scale Turbulent Structures in Supersonic Jets

Jet noise is a major concern in the design of commercial aircraft. Studies by various researchers suggest that aerodynamic noise is a major contributor to jet noise. Some of these studies indicate that most of the aerodynamic jet noise due to turbulent mixing occurs when there is a rapid variation in turbulent structure, i.e. rapidly growing or decaying vortices. The objective of this research was to simulate a compressible round jet to study the non-linear evolution of vortices and the resulting acoustic radiations. In particular, to understand the effect of turbulence structure on the noise. An ideal technique to study this problem is Direct Numerical Simulations (DNS), because it provides precise control on the initial and boundary conditions that lead to the turbulent structures studied. It also provides complete 3-dimensional time dependent data. Since the dynamics of a temporally evolving jet are not greatly different from those of a spatially evolving jet, a temporal jet problem was solved, using periodicity in the direction of the jet axis. This enables the application of Fourier spectral methods in the streamwise direction. Physically this means that turbulent structures in the jet are repeated in successive downstream cells instead of being gradually modified downstream into a jet plume. The DNS jet simulation helps us understand the various turbulent scales and mechanisms of turbulence generation in the evolution of a compressible round jet. These accurate flow solutions will be used in future research to estimate near-field acoustic radiation by computing the total outward flux across a surface and determine how it is related to the evolution of the turbulent solutions. Furthermore, these simulations allow us to investigate the sensitivity of acoustic radiations to inlet/boundary conditions, with possible appli(,a- tion to active noise suppression. In addition, the data generated can be used to compute, various turbulence quantities such as mean velocities, turbulent stresses, etc. which will aid in turbulence modeling. This report will be presented in two chapters. The first chapter describes some work on the linear stability of a supersonic round jet and the implications of this for the jet noise problem. The second chapter is an extensive discussion of numerical work using the spectral method which we use to solve the compressible Navier-Stokes equations to study turbulent jet flows. The method uses Fourier expansions in the azimuthal and streamwise direction and a 1-D B-spline basis representation in the radial direction. The B-spline basis is locally supported and this ensures block diagonal matrix equations which can be solved in O(N) steps. This is a modification of a boundary layer code developed by Robert Moser. A very accurate highly resolved DNS of a turbulent jet flow is produced.

Rao, Ram Mohan↗