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At least 1,783 records · Page 99

Correction to: Shock Response of Polymethylmethacrylate

Table 1 had incorrect densities for the RH and Poly samples. The correct density for RH samples is 1.1892 ± 0.0003 g/cm 3 . The correct density for Poly samples is 1.1842 ± 0.0004 g/cm 3 . The authors thank Christopher Neel from the Air Force Research Laboratory for bringing this error to our attention. Additionally, there is an error in Eq. (6). 1.7576 × 10 -2 should be 1.7576 × 10 -7 .

36 MATERIALS SCIENCE↗

Code-verification techniques for the method-of-moments implementation of the combined-field integral equation

Code verification plays an important role in establishing the credibility of computational simulations by assessing the correctness of the implementation of the underlying numerical methods. In computational electromagnetics, the numerical solution to integral equations incurs multiple interacting sources of numerical error, as well as other challenges, which render traditional code-verification approaches ineffective. In this paper, we provide approaches to separately measure the numerical errors arising from these different error sources for the method-of-moments implementation of the combined-field integral equation. Here, we demonstrate the effectiveness of these approaches for cases with and without coding errors.

97 MATHEMATICS AND COMPUTING↗

Manufactured solutions for an electromagnetic slot model

The accurate modeling of electromagnetic penetration is an important topic in computational electromagnetics. Electromagnetic penetration occurs through intentional or inadvertent openings in an otherwise closed electromagnetic scatterer, which prevent the contents from being fully shielded from external fields. To efficiently model electromagnetic penetration, aperture or slot models can be used with surface integral equations to solve Maxwell's equations. A necessary step towards establishing the credibility of these models is to assess the correctness of the implementation of the underlying numerical methods through code verification. Surface integral equations and slot models yield multiple interacting sources of numerical error and other challenges, which render traditional code-verification approaches ineffective. In this paper, we provide approaches to separately measure the numerical errors arising from these different error sources for the method-of-moments implementation of the electric-field integral equation with a slot model. Finally, we demonstrate the effectiveness of these approaches for a variety of cases.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Characterizing and Understanding the Remarkably Slow Basis Set Convergence of Several Minnesota Density Functionals for Intermolecular Interaction Energies

For a set of eight equilibrium intermolecular complexes, it is discovered in this paper that the basis set limit (BSL) cannot be reached by aug-cc-pV5Z for three of the Minnesota density functionals: M06-L, M06-HF, and M11-L. In addition, the M06 and M11 functionals exhibit substantial, but less severe, difficulties in reaching the BSL. By using successively finer grids, it is demonstrated that this issue is not related to the numerical integration of the exchange-correlation functional. In addition, it is shown that the difficulty in reaching the BSL is not a direct consequence of the structure of the augmented functions in Dunning’s basis sets, since modified augmentation yields similar results. By using a very large custom basis set, the BSL appears to be reached for the HF dimer for all of the functionals. As a result, it is concluded that the difficulties faced by several of the Minnesota density functionals are related to an interplay between the form of these functionals and the structure of standard basis sets. It is speculated that the difficulty in reaching the basis set limit is related to the magnitude of the inhomogeneity correction factor (ICF) of the exchange functional. A simple modification of the M06-L exchange functional that systematically reduces the basis set superposition error (BSSE) for the HF dimer in the aug-cc-pVQZ basis set is presented, further supporting the speculation that the difficulty in reaching the BSL is caused by the magnitude of the exchange functional ICF. In conclusion, the BSSE is plotted with respect to the internuclear distance of the neon dimer for two of the examined functionals.

97 MATHEMATICS AND COMPUTING↗

CGL description revisited

Solar wind observational studies have emphasized that the solar wind plasma data is bounded by the mirror and firehose instabilities, and it is often believed that these instabilities are of a purely kinetic nature. The simplest fluid model that generalizes magnetohydrodynamics with anisotropic temperatures is the Chew-Goldberger-Low model (CGL). Here we briefly revisit the CGL description and discuss its (otherwise well-documented) linear firehose and mirror instability thresholds; namely that the firehose instability threshold is identical to the one found from linear kinetic theory and that the mirror threshold contains a factor of 6 error. We consider a simple higher-order fluid model with time dependent heat flux equations and show that the mirror instability threshold is correctly reproduced. We also present fully nonlinear three-dimensional simulations of freely decaying turbulence for the Hall-CGL model with isothermal electrons. The spatial resolution of these simulations is 512{sup 3} and the formation of a spectral break in magnetic and velocity field spectra around the proton inertial length is found.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Principles of stereo reconstruction of aerial objects using stationary cameras

An overview is given here of the principles and mathematics of stereo reconstruction of objects in the sky using stationary cameras with an emphasis on meteorological applications. Through its Atmospheric Radiation Measurement program, the Department of Energy has operated stereo-photogrammetric cameras since 2017 as part of an effort to measure the life-cycle properties of clouds. At the core of that technology is stereo reconstruction, which calculates the real-world position of an object from the location of the object’s image in two cameras’ photographs. Here, stereo reconstruction is stripped down to its basic elements and presented using conventions tailored to applications in atmospheric science. In addition, the resulting equations are used to illustrate the high sensitivity of reconstructed cloud positions to errors in the cameras’ Euler angles. The interested reader will find here a self-contained guide to performing stereo reconstructions using distortion-corrected images from a pair of calibrated, stationary cameras, as well as a demonstration of the need for high accuracy in the measurement of camera properties and orientations.

47 OTHER INSTRUMENTATION↗

The Atacama Cosmology Telescope: temperature and gravitational lensing power spectrum measurements from three seasons of data

We present the temperature power spectra of the cosmic microwave background (CMB) derived from the three seasons of data from the Atacama Cosmology Telescope (ACT) at 148 GHz and 218 GHz, as well as the cross-frequency spectrum between the two channels. We detect and correct for contamination due to the Galactic cirrus in our equatorial maps. We present the results of a number of tests for possible systematic error and conclude that any effects are not significant compared to the statistical errors we quote. Where they overlap, we cross-correlate the ACT and the South Pole Telescope (SPT) maps and show they are consistent. The measurements of higher-order peaks in the CMB power spectrum provide an additional test of the ΛCDM cosmological model, and help constrain extensions beyond the standard model. The small angular scale power spectrum also provides constraining power on the Sunyaev-Zel'dovich effects and extragalactic foregrounds. We also present a measurement of the CMB gravitational lensing convergence power spectrum at 4.6σ detection significance.

79 ASTRONOMY AND ASTROPHYSICS↗

SU-G-TeP4-11: Implementation of a Non-Measurement-Based Patient-Specific IMRT QA Program

Purpose: To implement a comprehensive non-measurement-based verification program for patient-specific IMRT QA Methods: Based on published guidelines, a robust IMRT QA program should assess the following components: 1) accuracy of dose calculation, 2) accuracy of data transfer from the treatment planning system (TPS) to the record-and-verify (RV) system, 3) treatment plan deliverability, and 4) accuracy of plan delivery. Results: We have implemented an IMRT QA program that consist of four components: 1) an independent re-calculation of the dose distribution in the patient anatomy with a commercial secondary dose calculation program: Mobius3D (Mobius Medical Systems, Houston, TX), with dose accuracy evaluation using gamma analysis, PTV mean dose, PTV coverage to 95%, and organ-at-risk mean dose; 2) an automated in-house-developed plan comparison system that compares all relevant plan parameters such as MU, MLC position, beam iso-center position, collimator, gantry, couch, field size settings, and bolus placement, etc. between the plan and the RV system; 3) use of the RV system to check the plan deliverability and further confirm using “mode-up” function on treatment console for plans receiving warning; and 4) implementation of a comprehensive weekly MLC QA, in addition to routine accelerator monthly and daily QA. Among 1200 verifications, there were 9 cases of suspicious calculations, 5 cases of delivery failure, no data transfer errors, and no failure of weekly MLC QA. These 9 suspicious cases were due to the PTV extending to the skin or to heterogeneity correction effects, which would not have been caught using phantom measurement-based QA. The delivery failure was due to the rounding variation of MLC position between the planning system and RV system. Conclusion: A very efficient, yet comprehensive, non-measurement-based patient-specific QA program has been implemented and used clinically for about 18 months with excellent results.

60 APPLIED LIFE SCIENCES↗

Erratum to: Genome co-amplification upregulates a mitotic gene network activity that predicts outcome and response to mitotic protein inhibitors in breast cancer

In the version of this article that was published on PubMed [1] the author’s name “Mark A. Dane” was formatted incorrectly in the XML mark up and therefore appeared incorrectly on PubMed. In the XML mark up, the middle initial “A” was added as a Particle when it should have been included as a Given Name. Due to this error, the author’s name was incorrectly formatted in PubMed as “A Dane M” and not as “Dane MA”. The author’s name is correct on the BioMed Central website. The author's name in the XML of the original article [1] has been updated accordingly.

59 BASIC BIOLOGICAL SCIENCES↗

Laboratory demonstration of the prediction of wind-blown turbulence by adaptive optics at 8 kHz with use of LQG control

The low-latency adaptive optical mirror system (LLAMAS) is designed to push the limits on achievable latencies and frame rates. It has 21 subapertures across its pupil. Here, a reformulated version of the linear quadratic Gaussian (LQG) method predictive Fourier control is implemented in LLAMAS; for all modes, it takes just 30 µs to compute. In the testbed, a turbulator mixes hot and ambient air to produce wind-blown turbulence. Wind prediction clearly improves correction when compared to an integral controller. Closed-loop telemetry shows that wind-predictive LQG removes the characteristic “butterfly” and reduces temporal error power by up to a factor of three for mid-spatial frequency modes. Strehl changes seen in focal plane images are consistent with telemetry and the system error budget.

47 OTHER INSTRUMENTATION↗

Extending quantum key distribution through proxy re-encryption

Modern quantum key distribution (QKD) network designs are based on sending photons from one node to another and require free-space or dedicated fiber optic cables between nodes. The purpose of this is to co-generate secret key material on both sides of the quantum channel. In addition to this quantum link, there are several insecure classical channels that allow QKD algorithms to exchange book-keeping information and send symmetrically encrypted data. The attenuation of photons transmitted through fiber becomes too high to practically generate key material over fiber at distances of more than 100 km. Free-space transmission through the atmosphere or the vacuum of space can reduce attenuation, but at the cost of system complexity and sensitivity to other impairments, such as weather. To extend the effective range of QKD networks, we present a method that combines QKD algorithms with post-quantum, homomorphic key-switching to allow multiple parties to effectively share secret key material over longer distances through semi-trusted relay nodes. We define how such a system should work for arbitrary network topologies and provide proofs that our scheme is both correct and secure. We assess the feasibility of this solution by building and evaluating two implementations based on lattice-based cryptography: learning with errors.

97 MATHEMATICS AND COMPUTING↗

Precision Q0 Measurement of an SRF Cavity with a Digital RF Techniques

Direct measurement of the quality factor of SRF cavity using traditional RF techniques is essential for cavity production and development. Systematic effects of the measurement can contribute significant amounts of error to these measurements if not accounted for. This paper will present measurements taken at Fermilab using a digital RF system to characterize and correct for these systematic effects and directly measure the quality factor versus gradient curve for a single spoke resonator in the Spoke Test Cryostat at Fermilab. These measurements will be compared to traditional calorimetric measurements, and a discussion of improving/extending these techniques to other testing situations will be included.

43 PARTICLE ACCELERATORS↗

CFO Role in Cost Estimating & Budget Overview: GAO Review [Slides]

CFO works very closely with project controls to ensure correct rates and factors are being used. CFO automates where possible (e.g. upload from Work Package Generator to Oracle) to avoid data entry and errors. Consistent assumptions are made across program areas where possible. Weapons Program Planning & Integration Team coordinates all budget planning activities in PADWP office. Operating under uncertain budget conditions has resulted in close scrutiny of all costs and estimates.

99 GENERAL AND MISCELLANEOUS↗

Truly conserving with conservative remapping methods

Abstract. Conservative mapping of data from one horizontal grid to another should preserve certain integral or mean properties of the original data. This may be essential in some model applications, including ensuring realistic exchange of energy and mass between coupled model components. It can also be essential for certain types of analysis, such as evaluating how far a system is from an equilibrium state. For some common grids, existing remapping algorithms may fail to perfectly represent the shapes and sizes of grid cells, which leads to errors in the remapped fields. A procedure is presented here that enables users to rely on the mapping weights generated by remapping algorithms but corrects for their deficiencies. With this procedure, for a given pair of source and destination grids, a single set of remapping weights can be applied to remap any variable, including those with grid cells that are partially or fully masked.

58 GEOSCIENCES↗

High temperature oxidation of corrosion resistant alloys from machine learning

Parabolic rate constants, k p , were collected from published reports and calculated from corrosion product data (sample mass gain or corrosion product thickness) and tabulated for 75 alloys exposed to temperatures between ~800 and 2000 K (~500–1700 °C; 900–3000°F). Data were collected for environments including lab air, ambient and supercritical carbon dioxide, supercritical water, and steam. Materials studied include low- and high-Cr ferritic and austenitic steels, nickel superalloys, and aluminide materials. A combination of Arrhenius analysis, simple linear regression, supervised and unsupervised machine learning methods were used to investigate the relations between composition and oxidation kinetics. The supervised machine learning techniques produced the lowest mean standard errors. The most significant elements controlling oxidation kinetics were Ni, Cr, Al, and Fe, with Mo and Co composition also found to be significant features. The activation energies produced from the machine learning analysis were in the correct distributions for the diffusion constants for the oxide scales expected to dominate in each class.

Materials Science↗

A Novel Fast Helical 4D-CT Acquisition Technique to Generate Low-Noise Sorting Artifact–Free Images at User-Selected Breathing Phases

Purpose: To develop a novel 4-dimensional computed tomography (4D-CT) technique that exploits standard fast helical acquisition, a simultaneous breathing surrogate measurement, deformable image registration, and a breathing motion model to remove sorting artifacts. Methods and Materials: Ten patients were imaged under free-breathing conditions 25 successive times in alternating directions with a 64-slice CT scanner using a low-dose fast helical protocol. An abdominal bellows was used as a breathing surrogate. Deformable registration was used to register the first image (defined as the reference image) to the subsequent 24 segmented images. Voxel-specific motion model parameters were determined using a breathing motion model. The tissue locations predicted by the motion model in the 25 images were compared against the deformably registered tissue locations, allowing a model prediction error to be evaluated. A low-noise image was created by averaging the 25 images deformed to the first image geometry, reducing statistical image noise by a factor of 5. The motion model was used to deform the low-noise reference image to any user-selected breathing phase. A voxel-specific correction was applied to correct the Hounsfield units for lung parenchyma density as a function of lung air filling. Results: Images produced using the model at user-selected breathing phases did not suffer from sorting artifacts common to conventional 4D-CT protocols. The mean prediction error across all patients between the breathing motion model predictions and the measured lung tissue positions was determined to be 1.19 ± 0.37 mm. Conclusions: The proposed technique can be used as a clinical 4D-CT technique. It is robust in the presence of irregular breathing and allows the entire imaging dose to contribute to the resulting image quality, providing sorting artifact–free images at a patient dose similar to or less than current 4D-CT techniques.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

Applicability of Density Functional Theory in Reproducing Accurate Vibrational Spectra of Surface Bound Species

The structural equilibrium parameters, the adsorption energies, and the vibrational frequencies of the nitrogen molecule and the hydrogen atom adsorbed on the (111) surface of rhodium have been investigated using different generalized-gradient approximation (GGA), nonlocal correlation, meta-GGA, and hybrid functionals, namely, Perdew, Burke, and Ernzerhof (PBE), Revised-RPBE, vdW-DF, Tao, Perdew, Staroverov, and Scuseria functional (TPSS), and Heyd, Scuseria, and Ernzerhof (HSE06) functional in the plane wave formalism. Among the five tested functionals, nonlocal vdW-DF and meta-GGA TPSS functionals are most successful in describing energetics of dinitrogen physisorption to the Rh(111) surface, while the PBE functional provides the correct chemisorption energy for the hydrogen atom. It was also found that TPSS functional produces the best vibrational spectra of the nitrogen molecule and the hydrogen atom on rhodium within the harmonic formalism with the error of 22.62 and 21.1% for the NAN stretching and RhAH stretching frequency. Thus, TPSS functional was proposed as a method of choice for obtaining vibrational spectra of low weight adsorbates on metallic surfaces within the harmonic approximation. At the anharmonic level, by decoupling the RhAH and NAN stretching modes from the bulk phonons and by solving one- and two-dimensional Schr€odinger equation associated with the RhAH, RhAN, and NAN potential energy we calculated the anharmonic correction for NAN and RhAH stretching modes as 231 cm21 and 277 cm21 at PBE level. Anharmonic vibrational frequencies calculated with the use of the hybrid HSE06 function are in best agreement with available experiments.

Environmental Molecular Sciences Laboratory↗

Vitality models found useful in modeling tag-failure times in acoustic-tag survival studies

Abstract Acoustic telemetry studies often rely on the assumption that premature tag failure does not affect the validity of inferences. However, in some cases this assumption is possibly or likely invalid and it is necessary to apply a correction to estimation procedures. The question of which approaches and specific models are best suited to modeling acoustic tag failures has received little research attention. In this short communication, we present a meta-analysis of 42 acoustic tag-life studies, originally used to correct survival studies involving outmigrating juvenile salmonids in the Columbia/Snake river basin. We compare the performance of nine alternative parametric models including common failure–time/survival models and the vitality models of Li and Anderson Theor Popul Biol 76:118–131, (2009) and Demogr Res 28:341–372, (2013). The tag-life studies used acoustic tags from three different tag manufacturers, had expected lifetimes between 12 and 61 days, and had dry weights ranging from 0.22 to 1.65 g. In 57% of the cases, the vitality models of Li and Anderson Theor Popul Biol 76:118–131, (2009) and Demogr Res 28:341–372, (2013) fit the tag-failure times best. The vitality models were also the second-best choices in 17% of the cases. Together, the vitality models, log-logistic, (19%), and gamma models (14%) accounted for 90% of the models selected. Unlike more traditional failure–time models (e.g., Weibull, Gompertz, gamma, and log-logistic), the vitality models are capable of characterizing both the early onset of tag failure due to manufacturing errors and the anticipated battery life. We provide further guidance on appropriate sample sizes (50–100 tags) and procedures to be considered when applying precise tag-life corrections in release–recapture survival studies.

Skalski, John R. (ORCID:0000000270702505)↗