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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 19 records
All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

Molecular basis for polysaccharide recognition and modulated ATP hydrolysis by the O antigen ABC transporter

O antigens are ubiquitous protective extensions of lipopolysaccharides in the extracellular leaflet of the Gram-negative outer membrane. Following biosynthesis in the cytosol, the lipid-linked polysaccharide is transported to the periplasm by the WzmWzt ABC transporter. Often, O antigen secretion requires the chemical modification of its elongating terminus, which the transporter recognizes via a carbohydrate-binding domain (CBD). Here, using components from A. aeolicus, we identify the O antigen structure with methylated mannose or rhamnose as its cap. Crystal and cryo electron microscopy structures reveal how WzmWzt recognizes this cap between its carbohydrate and nucleotide-binding domains in a nucleotide-free state. ATP binding induces drastic conformational changes of its CBD, terminating interactions with the O antigen. ATPase assays and site directed mutagenesis reveal reduced hydrolytic activity upon O antigen binding, likely to facilitate polymer loading into the ABC transporter. Our results elucidate critical steps in the recognition and translocation of polysaccharides by ABC transporters.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

Large-area epitaxial growth of curvature-stabilized ABC trilayer graphene

The properties of van der Waals (vdW) materials often vary dramatically with the atomic stacking order between layers, but this order can be difficult to control. Trilayer graphene (TLG) stacks in either a semimetallic ABA or a semiconducting ABC configuration with a gate-tunable band gap, but the latter has only been produced by exfoliation. Here we present a chemical vapor deposition approach to TLG growth that yields greatly enhanced fraction and size of ABC domains. The key insight is that substrate curvature can stabilize ABC domains. Controllable ABC yields ~59% were achieved by tailoring substrate curvature levels. ABC fractions remained high after transfer to device substrates, as confirmed by transport measurements revealing the expected tunable ABC band gap. Substrate topography engineering provides a path to large-scale synthesis of epitaxial ABC-TLG and other vdW materials.

36 MATERIALS SCIENCE↗
DOE OSTI2026

Cryo-electron microscopy structure of a zinc uptake ABC transporter

Zn2+ is an essential micronutrient required for many biological processes. Microorganisms employ high-affinity Zn2+ ABC transporters to take up zinc from the environment when it is scarce, yet the mechanism of zinc uptake and its regulation remain poorly understood. Here, we report the cryo-electron microscopy structure of the Zn2+ ABC transporter complex ZnuB-ZnuC from Escherichia coli. It contains two ZnuB transport and two ZnuC regulatory subunits. The ZnuB homodimer is in an outward-facing, closed conformation with a large hydrophilic cavity at the dimer interface. Each ZnuC subunit contains an N-terminal nucleotide-binding domain and a C-terminal zinc-sensing domain (ZSD). Zn2+ binding to the ZSD locks the transporter in a closed state, whereas under low-Zn2+ conditions, the disorder of ZSD permits ATP-driven zinc uptake. Zn2+ ABC transporters are ubiquitously utilized by pathogenic bacteria to compete with hosts for Zn2+. These findings reveal potential therapeutic targets for disrupting Zn2+ homeostasis in antibiotic-resistant pathogens.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

A mycobacterial ABC transporter mediates the uptake of hydrophilic compounds

Mycobacterium tuberculosis (Mtb) is an obligate human pathogen and the causative agent of tuberculosis. Although Mtb can synthesize vitamin B 12 (cobalamin) de novo, uptake of cobalamin has been linked to pathogenesis of tuberculosis. Mtb does not encode any characterized cobalamin transporter; however, the gene rv1819c was found to be essential for uptake of cobalamin. This result is difficult to reconcile with the original annotation of Rv1819c as a protein implicated in the transport of antimicrobial peptides such as bleomycin. In addition, uptake of cobalamin seems inconsistent with the amino acid sequence, which suggests that Rv1819c has a bacterial ATP-binding cassette (ABC)-exporter fold. In this paper, we present structures of Rv1819c, which reveal that the protein indeed contains the ABC-exporter fold, as well as a large water-filled cavity of about 7,700 Å, which enables the protein to transport the unrelated hydrophilic compounds bleomycin and cobalamin. On the basis of these structures, we propose that Rv1819c is a multi-solute transporter for hydrophilic molecules, analogous to the multidrug exporters of the ABC transporter family, which pump out structurally diverse hydrophobic compounds from cells.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Enhancement of anticancer drug sensitivity in multidrug resistance cells overexpressing ATP-binding cassette (ABC) transporter ABCC10 by CP55, a synthetic derivative of 5-cyano-6-phenylpyrimidin

Highlights: • Multidrug resistance (MDR) in cancer is one of the major obstacles in chemotherapy. • ABCC10 mediates resistance to wide spectrum of chemotherapeutic agents, but only limited number of studies are available. • Overexpression of ABCC10 has been linked to various types of cancers including colorectal, gastric and lung cancer. • CP55 is a potent ABCC10 inhibitor which enhances the anticancer drug sensitivity in ABCC10-overexpression MDR cells. ATP-binding cassette (ABC) transporter C10 (ABCC10), also named multidrug resistance protein 7 (MRP7), is a member of ABC transporter superfamily and has been revealed to transport a wide range of chemotherapeutic agents including taxanes, epothilone B, Vinca alkaloids, and anthracyclines. In our previous study, a 5-cyano-6-phenylpyrimidin derivative CP55 was synthesized and found significantly reversal effect of multidrug resistance (MDR) mediated by ABCB1. In this study, we found CP55 also efficiently reversed MDR mediated by ABCC10. Our in vitro study showed that co-treatment with CP55 significantly increased the efficacy of ABCC10-substrate anticancer drugs in MDR cells overexpressing ABCC10. Furthermore, we showed that treatment with CP55 increased the intracellular accumulation of [{sup 3}H]-labeled anticancer drugs and in-turn decreasing drug efflux by inhibiting the transport activity, without altering ABCC10 protein ex-pression level or cellular localization. Potential CP55-ABCC10 interactions were predicted via docking analysis using human ABCC10 homology model and obtained high docking score. Therefore, CP55 represents a promising therapeutic agent in the combinational treatment of chemo-resistant cancer related to ABCC10.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2026

AmeriFlux FLUXNET-1F US-ABc Archbold grazed improved pasture

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-ABc Archbold grazed improved pasture. This is the FLUXNET version of the carbon flux data for the site US-ABc Archbold grazed improved pasture produced by applying the standard ONEFlux (1F) software. Site Description - This site is an improved pasture, regularly fertilized (nitrogen, ~26 kg/ha every 2 years) and limed (~229 kg/ha every 5 years, and historically received phosphorus fertilizer until 1986; . The soil type is a fine sandy Spodosol

Bernacchi, Carl [Global Change and Photosynthesis ↗
DOE OSTI2023

Advanced Building Construction (ABC) Research Opportunities Report: Industrializing Construction to Decarbonize Buildings

The DOE Building Technologies Office generally seeks to develop, demonstrate, and accelerate the adoption of cost-effective technologies, techniques, and tools in support of an equitable transition to a decarbonized building stock and energy system by 2050. This ABC Innovations Roadmap specifically focuses on and prioritizes innovations that support the industrialization of whole building retrofits and rapid growth of efficient new construction. The content relates to the integration of technologies and industrialization of processes associated with building construction and renovation. The ABC Innovations Roadmap cross-applies innovations in both the new and existing building sectors with a focus on widescale applicability. Installation flexibility is key to commoditizing solutions that are applicable for a wide variety of buildings (e.g., different building types, vintages, architectural details, and system configurations) and to help simplify decarbonization processes for the workforce.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗
DOE OSTI2020

A structural framework for unidirectional transport by a bacterial ABC exporter

The ATP-binding cassette (ABC) transporter of mitochondria (Atm1) mediates iron homeostasis in eukaryotes, while the prokaryotic homolog from Novosphingobium aromaticivorans (NaAtm1) can export glutathione derivatives and confer protection against heavy-metal toxicity. To establish the structural framework underlying the NaAtm1 transport mechanism, we determined eight structures by X-ray crystallography and single-particle cryo-electron microscopy in distinct conformational states, stabilized by individual disulfide crosslinks and nucleotides. As NaAtm1 progresses through the transport cycle, conformational changes in transmembrane helix 6 (TM6) alter the glutathione-binding site and the associated substrate-binding cavity. Significantly, kinking of TM6 in the post-ATP hydrolysis state stabilized by MgADPVO4 eliminates this cavity, precluding uptake of glutathione derivatives. The presence of this cavity during the transition from the inward-facing to outward-facing conformational states, and its absence in the reverse direction, thereby provide an elegant and conceptually simple mechanism for enforcing the export directionality of transport by NaAtm1. One of the disulfide crosslinked NaAtm1 variants characterized in this work retains significant glutathione transport activity, suggesting that ATP hydrolysis and substrate transport by Atm1 may involve a limited set of conformational states with minimal separation of the nucleotide-binding domains in the inward-facing conformation.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Scaling of magnetic dissipation and particle acceleration in ABC fields

Using particle-in-cell numerical simulations with electron–positron pair plasma, we study how the efficiencies of magnetic dissipation and particle acceleration scale with the initial coherence length λ 0 in relation to the system size L of the two-dimensional ‘Arnold–Beltrami–Childress’ (ABC) magnetic field configurations. Topological constraints on the distribution of magnetic helicity in two-dimensional systems, identified earlier in relativistic force-free simulations, that prevent the high-(L/λ 0 ) configurations from reaching the Taylor state, limit the magnetic dissipation efficiency to about ϵ diss ≃60% . Here we find that the peak growth time scale of the electric energy τ E,peak scales with the characteristic value of initial Alfvén velocity β A,ini like τ E,peak ∝(λ 0 /L)β$^{–3}_{A,ini}$ . The particle energy change is decomposed into non-thermal and thermal parts, with non-thermal energy gain dominant only for high initial magnetisation. The most robust description of the non-thermal high-energy part of the particle distribution is that the power-law index is a linear function of the initial magnetic energy fraction.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2024

Stable and unstable tiling patterns formed by ABC miktoarm star triblock terpolymers of symmetric interactions

Several discrepancies exist among previous self-consistent field calculations of symmetrically interacting ABC miktoarm star triblock terpolymer melts. Here we address this issue by including all known tiling patterns, as well as several lamellar-type phases known to bound the regions in the parameter space occupied by these patterns. After carefully studying the effect of numerical parameters on the free-energy accuracy, the central region of the phase diagram is constructed in detail; both the (3.4.6.4) pattern and the three-dimensional phase of hierarchical-hexagonal lamellae are found to be stable for the first time. The energetic and entropic contributions to the free-energy density of several phases are analyzed and compared in detail to reveal their stability mechanisms, including the important ( 3 2 .4.3.4) pattern. Comparisons to previous studies of the same model system are present throughout, with our results resolving the aforementioned discrepancies and providing a sound basis for future work to build upon. Published by the American Physical Society 2024

Materials Science↗
DOE OSTI2026

AmeriFlux US-ABc Archbold grazed improved pasture

This is the AmeriFlux version of the carbon flux data for the site US-ABc Archbold grazed improved pasture. Site Description - This site is an improved pasture, regularly fertilized (nitrogen, ~26 kg/ha every 2 years) and limed (~229 kg/ha every 5 years, and historically received phosphorus fertilizer until 1986; . The soil type is a fine sandy Spodosol

Bernacchi, Carl [Global Change and Photosynthesis ↗
DOE OSTI2025

A Recipe for ABC Multifamily Retrofits: Technologies, Financing, and Project Delivery

This report documents the final technical accomplishments and outcomes of Rocky Mountain Institute’s project under the U.S. Department of Energy (DOE) Award DE-EE0009064. The project aimed to develop, validate, and scale whole building retrofit solutions for multifamily buildings, including two configurations of Integrated Mechanical System Pods (IMSP-C and IMSP-U), in alignment with DOE Advanced Building Construction (ABC) initiative's decarbonization and energy efficiency goals. While the project made significant progress in Budget Period 1 (Phase 1) and throughout Budget Period 2 (Phase 2), activities were discontinued as of March 26, 2025, following a Stop Work Order issued by DOE. As such, this report reflects all completed work through that date. The project did not enter Budget Periods 3 and 4 (Phase 2), and demonstration site implementation, field M&V, and final commercialization execution were not conducted.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗
DOE OSTI2024

ABC -Auxetics: An Implicit Design Approach for Negative Poisson's Ratio Materials

A novel methodology is introduced for designing auxetic (negative Poisson's ratio) structures based on topological principles and is demonstrated by investigating a new class of auxetics based on two-dimensional (2D) textile weave patterns. Conventional methodology for designing auxetic materials typically involves determining a single deformable block (a unit cell) of material whose shape results in auxetic behavior. Consequently, patterning such a unit cell in a 2D (or 3D) domain results in a larger structure that exhibits overall auxetic behavior. Such an approach naturally relies on some prior intuition and experience regarding which unit cells may be auxetic. Second, tuning the properties of the resulting structures is typically limited to parametric variations of the geometry of a specific type of unit cell. Thus, most of the currently known auxetic structures belong to a selected few classes of unit cell geometries that are explicitly defined in accordance with a specified topological (i.e., grid structure). Herein, a new class of auxetic structures is demonstrated that, while periodic, can be generated implicitly, i.e., without reference to a specific unit cell design. The approach leverages weave-based parameters (A–B–C), resulting in a rich design space for auxetics that is previously unexplored.

36 MATERIALS SCIENCE↗
DOE OSTI2023

The ABC of RPV: classification of R-parity violating signatures at the LHC for small couplings

We perform a classification of all potential supersymmetric R-parity violating signatures at the LHC to address the question: are existing bounds on supersymmetric models robust, or are there still signatures not covered by existing searches, allowing LHC scale supersymmetry to be hiding? We analyze all possible scenarios with one dominant RPV trilinear coupling at a time, allowing for arbitrary LSPs and mass spectra. We consider direct production of the LSP, as well as production via gauge-cascades, and find 6 different experimental signatures for the $LL\overline{E}$-case, 6 for the $LQ\overline{D}$-case, and 5 for the $\overline{U}$ $\overline{D}$ $\overline{D}$-case; together these provide complete coverage of the RPV-MSSM landscape. This set of signatures is confronted with the existing searches by ATLAS and CMS. We find all signatures have been covered at the LHC, although not at the sensitivity level needed to probe the direct production of all LSP types. For the case of a dominant $LL\overline{E}$-operator, we use CheckMATE to quantify the current lower bounds on the supersymmetric masses and find the limits to be comparable to or better than the R-parity conserving case. Our treatment can be easily extended to scenarios with more than one non-zero RPV coupling.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗