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At least 19 records
All sourcesNASA NTRSDOE OSTI
DOE OSTI2021

UNH TDP - ADCP Raw Data and Processing Scripts - Fall 2021

This submission contains raw Acoustic Doppler Current Profiler (ADCP) data and processing scripts associated with MHKDR submission 394 (UNH TDP - Concurrent Measurements of Inflow, Power Performance, and Loads for a Grid-Synchronized Vertical Axis Cross-Flow Turbine Operating in a Tidal Estuary, DOI: 10.15473/1973860) from the University of New Hampshire and Atlantic Marine Energy Center (AMEC) turbine deployment platform. The user is directed to the MHKDR submission 394 for relevant context and detail of this deployment; see link below. The 394_READ_ME file here provides the description from that submission for quick reference. The READ_ME file for this specific instrument from the 394 submission is also available here. This submission contains a zipped folder structure containing raw data in its original format and MATLAB (2019a) processing scripts used to process and manipulate the data into its final form. The final data products are submitted in the 394 submission.

16 TIDAL AND WAVE POWER↗
NASA NTRS1989

On in situ 'calibration' of shipboard ADCPs

Methods for in situ calibration of acoustic-Doppler current profilers (ADCPs) are considered for measurement of absolute current profiles from a moving ship. Errors are of two types: sensitivity and alignment. Least square error estimates are given for experimental determination of both factors, for use in the 'water track' or 'bottom tracking' mode. Errors in the estimation of either factor may lead to large errors in derived water velocities, although the major contributions of the two factors arise from different sources and are approximately orthogonal to one another.

Joyce, Terrence M.↗
DOE OSTI2023

ADCP Upsample

This R script takes reads the csv file of stream-wise velocity data and generates a new time series of with comparable but distinct noise using the Langevin method and library. It simulates a time series measured at 1/10 the sampling rate by calculating a moving average of 10, though other sampling rates can be calculated by adjusting the moving average window. A stationary signal is calculated by taking the difference of the original signal and the moving average, then normalizing by the standard deviation of the moving average. The stationary signal is used to calculate drift and diffusion coefficients. Those coefficients are used to generate a new stationary signal. The new stationary signal is un-normalized and added to the moving average (or new equivalent signal) to create a new up-sampled velocity time-series.

Green, Nathan↗
NASA NTRS1994

Comparison of buoy-mounted 74-kHz acoustic Doppler current profilers with vector-measuring current meters

In December 1991, the National Data Buoy Center (NDBC) deployed two meteorological buoys in the Southern California Bight on a transect between San Diego and San Clemente Island. Each buoy consisted of a 10-m discus hull instrumented to measure a suite of meteorological parameters, and, for the first time in the NDBC buoy program, acoustic Doppler current profilers (ADCPs) were included to gather hourly current profiles beneath the two buoys. Moorings instrumented with seven vector-measuring current meters (VMCMs) were deployed adjacent to the NDBC buoys for several months and provided current observations for comparison with the ADCP measurements. When wave-induced buoy motion is not overly large, the observations of horizontal current made by the ADCP and the VMCM are highly correlated. Time series of differences between ADCP and VMCM measurements are characterized by a mean difference (bias error) of about 0.01 m/s and standard deviation of about 0.035 m/s for 1-h observations. Estimates of current spectra from ADCP and VMCM records suggest that the ADCP system can be characterized by a white noise level of 2 x 10(exp -3) sq m/sq s/cph. However, when the in situ environment is such that large surface waves are present (including breaking waves and whitecaps), erroneous current values are usually reported by the ADCP. Mean values of vertical velocities reported by the ADCP appear to be much larger than what could be physically expected and are therefore deemed unreliable.

Winant, Clinton↗
DOE OSTI2023

Axis dependent conduction polarity in the air-stable semiconductor, PdSe 2

Axis-dependent conduction polarity (ADCP) is a unique electronic phenomena in which the charge polarity of carrier conduction can differ from p-type to n-type depending on the direction of travel through the crystal. Most materials that exhibit ADCP are metals, and very few semiconducting materials exhibit this effect. Here, in this work, we establish that PdSe 2 , a ~0.5 eV band gap semiconductor that is air- and water-stable, exhibits ADCP, through the growth and characterization of the transport properties of crystals with extrinsic p- and n-type doping levels of Ir and Sb, respectively, in the 10 16 –10 18 cm –3 range. Electron doped PdSe 2 exhibits p-type conduction in the cross-plane direction and n-type conduction along the in-plane directions above an onset temperature of 100–200 K that varies with doping level. Lightly p-doped samples show p-type thermopower in all directions at low temperatures, but above ~360 K the in-plane thermopower turns negative. Density functional theory calculations indicate that the origin of ADCP arises from the complementary effective mass anisotropies in the valence and conduction bands in this material, which facilitate hole transport in the cross-plane direction, and electron transport along the in-plane directions. ADCP occurs at temperatures with sufficient thermal population of both carrier types to overcome the extrinsic doping levels to exploit the effective mass anisotropy. In total, the development of this stable semiconductor in which thermally or optically excited holes and electrons inherently migrate along different directions opens up numerous potential applications in a multitude of technologies.

36 MATERIALS SCIENCE↗
DOE OSTI2025

Cross-species analysis of FcγRIIa/b (CD32a/b) polymorphisms at position 131: structural and functional insights into the mechanism of IgG- mediated phagocytosis in human and macaque

Introduction Antibodies play a critical role in immunity in part by mediating clearance of pathogens and infected cells by antibody-dependent cellular phagocytosis (ADCP) through engagement of Fc gamma receptors (FcγRs) on innate immune cells. Among these, FcγRIIa (CD32a) is a key activating receptor expressed on macrophages, dendritic cells, and other antigen-presenting cells. Its affinity for IgG and ability to mediate ADCP is influenced by allelic polymorphisms. In humans, a single amino acid polymorphism at position 131, where histidine (H) is substituted with arginine (R), leads to decreased IgG1 and IgG2 subclass binding affinity and, consequently, lower efficiency of phagocytic responses. Rhesus macaques ( Macaca mulatta ), which are widely used as nonhuman primate models, exhibit a similar polymorphism at position 131 of FcγRIIa, but with arginine replaced by proline (P). Here, we investigated structure-function relationships associated with the FcγRIIa polymorphism at position 131 in both species, specifically with respect to IgG1 and IgG2. Methods We determined the structures of complexes formed by each variant with IgG1 Fc and those formed by the higher affinity variant with IgG2 Fc for both species by x-ray crystallography and linked these structures to affinity and activity using SPR and an ADCP assay. We also determined the structure of human inhibitory FcγRIIb (CD32b) in complex with IgG1 Fc by x-ray crystallography. Results Through analysis of these structures, our studies reveal that FcγRIIa engagement is minimally influenced by Fc glycan composition, distinguishing it from FcγRIIIa whose affinity is strongly influenced by glycan-composition. Comparative structures of human and macaque FcγRIIa variants demonstrate species- and allele-specific differences in Fc binding, but our functional assays showed only minimal allele-specific effects in humans. In contrast, allele-specific effects in macaques were highly significant; the macaque P 131 variant showing uniformly reduced IgG affinity. Conclusion These insights highlight fundamental interspecies and allelic distinctions that are critical for interpreting FcγRIIa-mediated effector functions in macaque models and for optimizing translational antibody and vaccine design.

Tolbert, William D.↗
NASA NTRS1987

Comparison of shipboard acoustic Doppler current profiler and moored current measurements in the Equatorial Pacific

Depth-averaged current shears computed from shipboard acoustic Doppler current profiler (ADCP) and moored Savonius rotor and vane vector-averaging current meter (VACM) measurements are compared at 35, 62.5, 100 and 140 m depths within 7 km of each other near 0 deg, 140 deg W during a 12-day interval in November 1984. The agreement between the VACM and ADCP shears was excellent. The average root-mean-square difference of hourly shear values was small, approximately 0.0021/s, and the average correlation coefficient was 0.90. Spectral estimates were equivalent to within a 95 percent significance level and the VACM and ADCP shears were 95 percent statistically coherent with zero phase difference for frequencies below 0.2 cycles per hour.

Chereskin, T. K.↗
DOE OSTI2023

Tanana River Test Site Model Verification Using the Marine and Hydrokinetic Toolkit (MHKiT)

The marine energy (ME) industry historically lacked a standardized data processing toolkit for common tasks such as data ingestion, quality control, and visualization. The marine and hydrokinetic toolkit (MHKiT) solved this issue by providing a public software deployment (open-source and free) toolkit for the ME industry to store and maintain commonly used functionality for wave, tidal, and river energy. This paper demonstrates an initial model verification study in MHKiT. Using Delft3D, a numerical model of the Tanana River Test Site (TRTS) at Nenana, Alaska was created. Field data from the site was collected using an Acoustic Doppler Current Profiler (ADCP) at the proposed Current Energy Converter (CEC) locations. MHKiT is used to process model simulations from Delft3D and compare them to the transect data from the ADCP measurements at TRTS. The ability to use a single tool to process simulation and field data demonstrates the ease at which the ME industry can obtain results and collaborate across specialties, reducing errors and increasing efficiency.

13 HYDRO ENERGY↗
DOE OSTI2022

San Juan Islands Tidal Energy Characterization

The San Juan Islands are an archipelago with multiple tidal channels that produce strong tidal currents that could be harnessed for electricity generation. At present, there is limited electrical generation on the islands, with power primarily provided by a subsea cable connection with the mainland. As part of the C-MIST program, NOAA's CO-OPS program collected ADCP data at 46 stations in the San Juan Islands and adjacent waterways, from April to August of 2017. PNNL has recently developed a 3-D tidal hydrodynamic model for tidal energy resource characterization and assessment in the Salish Sea (Yang et al. 2021). Several tidal channels in the San Juan Islands were identified as top hotspots for potential tidal energy extraction. However, due to the complex geometry and inter-connected waterways, tidal currents around San Juan Islands also exhibit strong spatial and temporal asymmetry. Therefore, it is important to analyze the NOAA ADCP data to define metrics relevant to tidal energy, and further refine PNNL's tidal hydrodynamic model to accurately simulate currents in small tidal channels and account for sharp bathymetry gradients. The outcome of this technical assistance will allow developers to identify the promising opportunities for tidal energy in the San Juan Islands.

16 TIDAL AND WAVE POWER↗
DOE OSTI2023

A Fully Human IgE Specific for CD38 as a Potential Therapy for Multiple Myeloma

Multiple myeloma (MM) is an incurable malignancy of plasma cells and the second most common hematologic malignancy in the United States. Although antibodies in clinical cancer therapy are generally of the IgG class, antibodies of the IgE class have attractive properties as cancer therapeutics, such as their high affinity for Fc receptors (FcεRs), the low serum levels of endogenous IgE allowing for less competition for FcR occupancy, and the lack of inhibitory FcRs. Importantly, the FcεRs are expressed on immune cells that elicit antibody-dependent cell-mediated cytotoxicity (ADCC), antibody-dependent cell-mediated phagocytosis (ADCP), and/or antigen presentation such as mast cells, eosinophils, macrophages, and dendritic cells. We now report the development of a fully human IgE targeting human CD38 as a potential MM therapy. We targeted CD38 given its high and uniform expression on MM cells. The novel anti-CD38 IgE, expressed in mammalian cells, is properly assembled and secreted, exhibits the correct molecular weight, binds antigen and the high affinity FcεRI, and induces degranulation of FcεRI expressing cells in vitro and also in vivo in transgenic BALB/c mice expressing human FcεRIα. Moreover, the anti-CD38 IgE induces ADCC and ADCP mediated by monocytes/macrophages against human MM cells (MM.1S). Importantly, the anti-CD38 IgE also prolongs survival in a preclinical disseminated xenograft mouse model using SCID-Beige mice and human MM.1S cells when administered with human peripheral blood mononuclear cells (PBMCs) as a source of monocyte effector cells. Our results suggest that anti-CD38 IgE may be effective in humans bearing MM and other malignancies expressing CD38.

62 RADIOLOGY AND NUCLEAR MEDICINE↗
DOE OSTI2022

Modeling of streamflow in a 30 km long reach spanning 5 years using OpenFOAM 5.x

Abstract. Developing accurate and efficient modeling techniques for streamflow at the tens-of-kilometers spatial scale and multi-year temporal scale is critical for evaluating and predicting the impact of climate- and human-induced discharge variations on river hydrodynamics. However, achieving such a goal is challenging because of limited surveys of streambed hydraulic roughness, uncertain boundary condition specifications, and high computational costs. We demonstrate that accurate and efficient three-dimensional (3-D) hydrodynamic modeling of natural rivers at 30 km and 5-year scales is feasible using the following three techniques within OpenFOAM, an open-source computational fluid dynamics platform: (1) generating a distributed hydraulic roughness field for the streambed by integrating water-stage observation data, a rough wall theory, and a local roughness optimization and adjustment strategy; (2) prescribing the boundary condition for the inflow and outflow by integrating precomputed results of a one-dimensional (1-D) hydraulic model with the 3-D model; and (3) reducing computational time using multiple parallel runs constrained by 1-D inflow and outflow boundary conditions. Streamflow modeling for a 30 km long reach in the Columbia River (CR) over 58 months can be achieved in less than 6 d using 1.1 million CPU hours. The mean error between the modeled and the observed water stages for our simulated CR reach ranges from −16 to 9 cm (equivalent to approximately ±7 % relative to the average water depth) at seven locations during most of the years between 2011 and 2019. We can reproduce the velocity distribution measured by the acoustic Doppler current profiler (ADCP). The correlation coefficients of the depth-averaged velocity between the model and ADCP measurements are in the range between 0.71 and 0.83 at 75 % of the survey cross sections. With the validated model, we further show that the relative importance of dynamic pressure versus hydrostatic pressure varies with discharge variations and topography heterogeneity. Given the model's high accuracy and computational efficiency, the model framework provides a generic approach to evaluate and predict the impacts of climate- and human-induced discharge variations on river hydrodynamics at tens-of-kilometers and decadal scales.

58 GEOSCIENCES↗
NASA NTRS1988

Application of acoustic-Doppler current profiler and expendable bathythermograph measurements to the study of the velocity structure and transport of the Gulf Stream

The degree to which Acoustic-Doppler Current Profiler (ADCP) and expendable bathythermograph (XBT) data can provide quantitative measurements of the velocity structure and transport of the Gulf Stream is addressed. An algorithm is used to generate salinity from temperature and depth using an historical Temperature/Salinity relation for the NW Atlantic. Results have been simulated using CTD data and comparing real and pseudo salinity files. Errors are typically less than 2 dynamic cm for the upper 800 m out of a total signal of 80 cm (across the Gulf Stream). When combined with ADCP data for a near-surface reference velocity, transport errors in isopycnal layers are less than about 1 Sv (10 to the 6th power cu m/s), as is the difference in total transport for the upper 800 m between real and pseudo data. The method is capable of measuring the real variability of the Gulf Stream, and when combined with altimeter data, can provide estimates of the geoid slope with oceanic errors of a few parts in 10 to the 8th power over horizontal scales of 500 km.

Joyce, T. M.↗
NASA NTRS1991

The mean sea surface height and geoid along the Geosat subtrack from Bermuda to Cape Cod

The mean sea-surface height and the gravitational geoid are presently estimated via near-surface velocity changes and concurrent sea-level changes along an ascending Geosat subtrack. The velocity measurements were made on three traverses, within ten days, of a Geosat subtrack, by means of an acoustic Doppler current profiler (ADCP). The mean sea-surface height was estimated as the difference between the instantaneous sea-surface height from ADCP and the Geosat residual sea level. In order to minimize mesoscale errors in the estimate, the along-track geoid estimate was computed as the difference between mean sea-level height from the Geosat Exact Repeat Mission and an estimate of the mean sea-surface height.

Kelly, Kathryn A.↗
NASA NTRS2001

Predictability of the California Current System

The physical and biological oceanography of the Southern California Bight (SCB), a highly productive subregion of the California Current System (CCS) that extends from Point Conception, California, south to Ensenada, Mexico, continues to be extensively studied. For example, the California Cooperative Oceanic Fisheries Investigations (CalCOFI) program has sampled this region for over 50 years, providing an unparalleled time series of physical and biological data. However, our understanding of what physical processes control the large-scale and mesoscale variations in these properties is incomplete. In particular, the non-synoptic and relatively coarse spatial sampling (70km) of the hydrographic grid does not completely resolve the mesoscale eddy field (Figure 1a). Moreover, these unresolved physical variations exert a dominant influence on the evolution of the ecosystem. In recent years, additional datasets that partially sample the SCB have become available. Acoustic Doppler Current Profiler (ADCP) measurements, which now sample upper-ocean velocity between stations, and sea level observations along TOPEX tracks give a more complete picture of the mesoscale variability. However, both TOPEX and ADCP are well-sampled only along the cruise or orbit tracks and coarsely sampled in time and between tracks. Surface Lagrangian drifters also sample the region, although irregularly in time and space. SeaWiFS provides estimates of upper-ocean chlorophyll-a (chl-alpha), usually giving nearly complete coverage for week-long intervals, depending on cloud coverage. Historical ocean color data from the Coastal Zone Color Scanner (CZCS) has been used extensively to determine phytoplankton patterns and variability, characterize the primary production across the SCB coastal fronts, and describe the seasonal and interannual variability in pigment concentrations. As in CalCOFI, these studies described much of the observed structures and their variability over relatively large space and time scales.

Miller, Arthur J.↗
DOE OSTI2022

20 Year Daily Average Modeled Velocity and Discharge for Openwater Season at Five Communities on Kuskokwim River, Alaska

This dataset includes modeled velocity and discharge at five communities in the middle Kuskokwim River region: Aniak, Chuathbaluk, Crooked Creek, Red Devil and Stony River. Modeled velocities and discharge represent daily averages calculated for the openwater season (OWS) from June 1 - October 18 over the 20 year period 2000-2019 using the raw data described below and included in this archive; full details of methodology are described in (Brown et al. submitted to Renewable Energy). Raw data inputs to inform the modeling process include in-situ measurements of 1) discharge with an acoustic Doppler current meter (ADCP, 600kHz Workhorse Rio Grande by Teledyne RD Instruments) and a global positioning receiver (GPS, Trimble 5700, 5800 and R8) utilizing Real Time Kinematic (RTK) GPS mode over 1-2 days at each site in 2009 or 2010 (Ravens 2014), and 2) river stage with a water level logger (HOBO U20-001-01 by Onset) over 2-9 weeks at each site (Ravens 2014), 3) in addition to a 20 year long-term discharge record collected at the USGS stream gage site in Crooked Creek (USGS 2016). Raw data (discharge and stage) are included in this archive for two additional communities: Lower Kalskag and Sleetmute, where modeled velocities were not calculated due to equipment failure or loss. The USGS stream gage data at Crooked Creek (USGS 2016) and stream gage methodology (Turnipseed and Sauer 2010) are publicly available online, so the data are not duplicated here.

16 TIDAL AND WAVE POWER↗
DOE OSTI2022

Tidal Currents in San Juan Archipelago, Washington

Re-analyzed acoustic Doppler current profiler (ADCP) data originally collected by NOAA CO-OPS (Center for Operational Oceanographic Products and Services) and equivalent point data from Pacific Northwest National Laboratory's FVCOM (Finite Volume Community Ocean Model) model of the region. Data are processed to products describing characteristics of tidal currents relevant to tidal turbines, as well as power output estimates for a notional turbine deployed from a surface platform or from the seabed at each location. These data underpin the results presented in their associated paper - see below.

16 TIDAL AND WAVE POWER↗