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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 19 records
All sourcesNASA NTRSDOE OSTI
DOE OSTI2018

Taxonomic patterns in the nitrogen assimilation of soil prokaryotes

Summary Nitrogen (N) is frequently a limiting nutrient in soil; its availability can govern ecosystem functions such as primary production and decomposition. Assimilation of N by microorganisms impacts the availability of N in soil. Despite its established ecological significance, the contributions of microbial taxa to N assimilation are unknown. Here we measure N uptake and use by microbial phylotypes and taxonomic groups within a diverse assemblage of soil microbes through quantitative stable isotope probing (qSIP) with 15 N. Following incubation with 15 , distinct patterns of 15 N assimilation among taxonomic groups were observed. For instance, glucose addition stimulated 15 N assimilation in most members of Actinobacteria and Proteobacteria but generally decreased 15 N use by Firmicutes and Bacteriodetes. While is considered a preferred and universal source of N to prokaryotes, the majority (> 80%) of N assimilation in our soils could be attributed to a handful of active orders. Characterizing N assimilation of taxonomic groups with 15 N qSIP may provide a basis for understanding how microbial community composition influences N availability in the environment.

Morrissey, Ember M.↗
DOE OSTI2016

Assimilating compact phase space retrievals of atmospheric composition with WRF-Chem/DART: a regional chemical transport/ensemble Kalman filter data assimilation system

This study introduces the Weather Research and Forecasting Model with chemistry/Data Assimilation Research Testbed (WRF-Chem/DART) chemical transport forecasting/data assimilation system together with the assimilation of ''compact phase space retrievals'' of satellite-derived atmospheric composition products. WRF-Chem is a state-of-the-art chemical transport model. DART is a flexible software environment for researching ensemble data assimilation with different assimilation and forecast model options. DART's primary assimilation tool is the ensemble adjustment Kalman filter. WRF-Chem/DART is applied to the assimilation of Terra/Measurement of Pollution in the Troposphere (MOPITT) carbon monoxide (CO) trace gas retrieval profiles. Those CO observations are first assimilated as quasi-optimal retrievals (QORs). Our results show that assimilation of the CO retrievals (i) reduced WRF-Chem's CO bias in retrieval and state space, and (ii) improved the CO forecast skill by reducing the Root Mean Square Error (RMSE) and increasing the Coefficient of Determination ($R^2$). Those CO forecast improvements were significant at the 95 % level. Trace gas retrieval data sets contain (i) large amounts of data with limited information content per observation, (ii) error covariance cross-correlations, and (iii) contributions from the retrieval prior profile that should be removed before assimilation. Those characteristics present challenges to the assimilation of retrievals. This paper addresses those challenges by introducing the assimilation of compact phase space retrievals (CPSRs). CPSRs are obtained by preprocessing retrieval data sets with an algorithm that (i) compresses the retrieval data, (ii) diagonalizes the error covariance, and (iii) removes the retrieval prior profile contribution. Most modern ensemble assimilation algorithms can efficiently assimilate CPSRs. Our results show that assimilation of MOPITT CO CPSRs reduced the number of observations (and assimilation computation costs) by ~ 35 %, while providing CO forecast improvements comparable to or better than with the assimilation of MOPITT CO QORs.

58 GEOSCIENCES↗
DOE OSTI2019

Delineating Facies Spatial Distribution by Integrating Ensemble Data Assimilation and Indicator Geostatistics with Level-Set Transformation

The facies-based approach has been widely adopted to delineate an aquifer into distinct geological units with unique distributions of hydraulic, physical, and/or chemical properties. The recent development in ensemble-based data assimilation methods allows both the direct and indirect data to be used to improve facies delineation. A major difficulty in those applications is to honor the spatial continuity and avoid overfitting after data assimilation. We introduce a new facies delineation framework to integrate ensemble data assimilation with traditional transition probability-based geostatistics. A level-set concept is used to parametrize discrete facies indicators and for updating facies shape. During the iterative data assimilation process, we impose spatial continuity by conditioning facies field generation on points selected adaptively based on their sensitivity to observation data. This reconditioning step is a key step to maintain spatial continuity and overcome over-fitting problems in inversion. We selected two examples to evaluate the performance of the new framework in estimating facies-based permeability field. The first example is a two-dimensional synthetic system with transient head data induced by pumping tests used for delineating two facies. The second example is a three-dimensional case with three facies, conceptualized from a field tracer experiment within the Columbia River corridor in Washington State, USA. Both examples demonstrate that the new method can adequately capture the spatial pattern of hydrofacies with reconditioning, which leads to the improved prediction of system behaviors.

Song, Xuehang↗
DOE OSTI2016

Spectral characteristics of background error covariance and multiscale data assimilation

The spatial resolutions of numerical atmospheric and oceanic circulation models have steadily increased over the past decades. Horizontal grid spacing down to the order of 1 km is now often used to resolve cloud systems in the atmosphere and sub-mesoscale circulation systems in the ocean. These fine resolution models encompass a wide range of temporal and spatial scales, across which dynamical and statistical properties vary. In particular, dynamic flow systems for small scales can become spatially localized and temporarily intermittent. An analysis shows that the background correlation length scale is larger than 75 km for streamfunctions, even for a 2-km resolution model, and larger than 25 km for water vapor mixing ratios. The theoretical analyses suggest that such correlation length scales prevent the currently used data assimilation schemes from constraining spatial scales smaller than 150 km for streamfunctions and 50 km for water vapor mixing ratios. These results highlight the necessity of fundamentally modifying the currently used data assimilation algorithm for assimilating high-resolution observations into the aforementioned fine resolution models. A multiscale methodology based on scale decomposition is suggested, and challenges are discussed.

Li, Zhijin↗
DOE OSTI2018

A global coupled ensemble data assimilation system using the Community Earth System Model and the Data Assimilation Research Testbed

In this paper, we present a description of the CESM/DART ensemble coupled data assimilation (DA) system based on the Community Earth System Model (CESM) and the Data Assimilation Research Testbed (DART) assimilation software. The CESM/DART should be viewed as a flexible system to support the DA needs of the CESM research community and not as a static reanalysis product. In this implementation of the CESM/DART, conventional insitu observations of the ocean and atmosphere are assimilated into the respective component models of the CESM using a 30-member ensemble adjustment Kalman filter (EAKF). CESM/DART is run in a “weakly coupled” configuration wherein observations native to each climate system component only directly impact the state vector for that component. Information is passed between components indirectly through the short-term coupled model forecasts that provide the EAKF background ensemble. This system leverages previous ensemble DA development for the Community Atmosphere Model and Parallel Ocean Program models using the DART EAKF. The CESM/DART project is a step towards providing increasingly useful DA capabilities for the CESM research community. Results are presented for our prototype 12-year reanalysis, run from 1970 to mid 1982. Multiple lines of evidence demonstrate that the system is capable of constraining the CESM coupled model to simulate the historical variability of the climate system in the well-observed Northern Hemisphere. A collection of monthly average variables, climate mode indices, observation diagnostics and snapshots of synoptic weather in the ocean and atmosphere are compared to established datasets, showing especially good agreement in the Northern Hemisphere. A discussion of the CESM/DART as a modular, community facility and the benefits and challenges associated with this vision is also included.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2014

Kalman filter data assimilation: Targeting observations and parameter estimation

This paper studies the effect of targeted observations on state and parameter estimates determined with Kalman filter data assimilation (DA) techniques. We first provide an analytical result demonstrating that targeting observations within the Kalman filter for a linear model can significantly reduce state estimation error as opposed to fixed or randomly located observations. We next conduct observing system simulation experiments for a chaotic model of meteorological interest, where we demonstrate that the local ensemble transform Kalman filter (LETKF) with targeted observations based on largest ensemble variance is skillful in providing more accurate state estimates than the LETKF with randomly located observations. Additionally, we find that a hybrid ensemble Kalman filter parameter estimation method accurately updates model parameters within the targeted observation context to further improve state estimation.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2017

Soil thermal dynamics, snow cover, and frozen depth under five temperature treatments in an ombrotrophic bog: Constrained forecast with data assimilation: Forecast With Data Assimilation

We report that accurate simulation of soil thermal dynamics is essential for realistic prediction of soil biogeochemical responses to climate change. To facilitate ecological forecasting at the Spruce and Peatland Responses Under Climatic and Environmental change site, we incorporated a soil temperature module into a Terrestrial ECOsystem (TECO) model by accounting for surface energy budget, snow dynamics, and heat transfer among soil layers and during freeze-thaw events. We conditioned TECO with detailed soil temperature and snow depth observations through data assimilation before the model was used for forecasting. The constrained model reproduced variations in observed temperature from different soil layers, the magnitude of snow depth, the timing of snowfall and snowmelt, and the range of frozen depth. The conditioned TECO forecasted probabilistic distributions of soil temperature dynamics in six soil layers, snow, and frozen depths under temperature treatments of +0.0, +2.25, +4.5, +6.75, and +9.0°C. Air warming caused stronger elevation in soil temperature during summer than winter due to winter snow and ice. And soil temperature increased more in shallow soil layers in summer in response to air warming. Whole ecosystem warming (peat + air warmings) generally reduced snow and frozen depths. The accuracy of forecasted snow and frozen depths relied on the precision of weather forcing. Uncertainty is smaller for forecasting soil temperature but large for snow and frozen depths. Lastly, timely and effective soil thermal forecast, constrained through data assimilation that combines process-based understanding and detailed observations, provides boundary conditions for better predictions of future biogeochemical cycles.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2013

A survey of implicit particle filters for data assimilation [Implicit particle filters for data assimilation]

Implicit particle filters for data assimilation update the particles by first choosing probabilities and then looking for particle locations that assume them, guiding the particles one by one to the high probability domain. We provide a detailed description of these filters, with illustrative examples, together with new, more general, methods for solving the algebraic equations and with a new algorithm for parameter identification.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2018

Temperature sensitivity of soil organic carbon decomposition increased with mean carbon residence time: Field incubation and data assimilation

Abstract Temperature sensitivity of soil organic carbon ( SOC ) decomposition is one of the major uncertainties in predicting climate‐carbon (C) cycle feedback. Results from previous studies are highly contradictory with old soil C decomposition being more, similarly, or less sensitive to temperature than decomposition of young fractions. The contradictory results are partly from difficulties in distinguishing old from young SOC and their changes over time in the experiments with or without isotopic techniques. In this study, we have conducted a long‐term field incubation experiment with deep soil collars (0–70 cm in depth, 10 cm in diameter of PVC tubes) for excluding root C input to examine apparent temperature sensitivity of SOC decomposition under ambient and warming treatments from 2002 to 2008. The data from the experiment were infused into a multi‐pool soil C model to estimate intrinsic temperature sensitivity of SOC decomposition and C residence times of three SOC fractions (i.e., active, slow, and passive) using a data assimilation ( DA ) technique. As active SOC with the short C residence time was progressively depleted in the deep soil collars under both ambient and warming treatments, the residences times of the whole SOC became longer over time. Concomitantly, the estimated apparent and intrinsic temperature sensitivity of SOC decomposition also became gradually higher over time as more than 50% of active SOC was depleted. Thus, the temperature sensitivity of soil C decomposition in deep soil collars was positively correlated with the mean C residence times. However, the regression slope of the temperature sensitivity against the residence time was lower under the warming treatment than under ambient temperature, indicating that other processes also regulated temperature sensitivity of SOC decomposition. These results indicate that old SOC decomposition is more sensitive to temperature than young components, making the old C more vulnerable to future warmer climate.

Zhou, Xuhui↗
DOE OSTI2021

Assimilation of X-band Phased-Array Radar Data with EnKF for the Analysis and Warning Forecast of a Tornadic storm

The impact of assimilating China's operational X-band Phased-Array radar's (X-PAR) data on the analysis and warning forecast of the vortex structure and intensity of the June 8, 2018 Foshan, Guangdong province, tornadic storm was investigated for the first time using an Ensemble Kalman Filter (EnKF) data assimilation system. Both radar radial velocity (Vr) and reflectivity (Z) from two S-band operational radars and one X-PAR were assimilated. Deterministic forecasts were launched every 6 min from 05:42 UTC (20 min before the tornado touched down) to 06:00 UTC from the EnKF mean analysis field. Five experiments were conducted to examine the added capability of Z assimilation of the EnKF system, and to investigate the impact of assimilating X-PAR data on the analysis and prediction of the tornadic storm. Compared to the experiment without Z assimilation, the assimilation of Z reduced the analysis error and greatly reduced the forecast error of Z. Furthermore, the assimilation of X-PAR data greatly improved the vortex structure of the tornadic storm at low levels, and improved the intensity of the rear inflow of the tornadic storm, especially with a higher assimilation frequency. Compared to the experiments without X-PAR data assimilation, assimilating X-PAR data improved the predictability of tornadic storm.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2019

Estimating surface carbon fluxes based on a local ensemble transform Kalman filter with a short assimilation window and a long observation window: an observing system simulation experiment test in GEOS-Chem 10.1

We developed a carbon data assimilation system to estimate surface carbon fluxes using the local ensemble transform Kalman filter (LETKF) and atmospheric transport model GEOS-Chem driven by the MERRA-1 reanalysis of the meteorological field based on the Goddard Earth Observing System model,version 5 (GEOS-5). This assimilation system is inspired by the method of Kang et al. (2011, 2012), who estimated the surface carbon fluxes in an observing system simulation experiment (OSSE) as evolving parameters in the assimilation of the atmospheric CO 2 , using a short assimilation window of 6 h. They included the assimilation of the standard meteorological variables, so that the ensemble provided a measure of the uncertainty in the CO 2 transport. After proposing new techniques such as “variablelocalization”, and increased observation weights near the surface, they obtained accurate surface carbon fluxes at grid-point resolution. We developed a new version of the local ensemble transform Kalman filter related to the “running-in-place”(RIP) method used to accelerate the spin-up of ensemble Kalman filter (EnKF) data assimilation(Kalnay and Yang, 2010; Wang et al., 2013; Yang et al., 2012). Like RIP, the new assimilation system uses the “no cost smoothing” algorithm for the LETKF (Kalnay et al., 2007b), which allows shifting the Kalman filter solution forward or backward within an assimilation window at no cost. In the new scheme a long “observation window” (e.g., 7 d or longer) is used to design a LETKF ensemble at 7 d. Then, the RIP smoother is used to obtain an accurate final analysis at 1 d. This new approach has the advantage of being based on a short assimilation window, which makes it more accurate,and of having been exposed to the future 7 d observations, which improves the analysis and accelerates the spin-up. The assimilation and observation windows are then shifted forward by 1 d, and the process is repeated.This reduces significantly the analysis error, suggesting that the newly developed assimilation method can be used with other Earth system models,especially in order to make greater use of observations in conjunction with models.

58 GEOSCIENCES↗