Biological oceanography
Biological oceanography and ocean food resource development using satellite observation
Ewing, G. C.↗
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Biological Oceanography
Within the framework of global biogeochemical cycles and ocean productivity, there are two areas that will be of particular interest to biological oceanography in the 1990s. The first is the mapping in space time of the biomass and productivity of phytoplankton in the world ocean. The second area is the coupling of biological and physical processes as it affects the distribution and growth rate of phytoplankton biomass. Certainly other areas will be of interest to biological oceanographers, but these two areas are amenable to observations from satellites. Temporal and spatial variability is a regular feature of marine ecosystems. The temporal and spatial variability of phytoplankton biomass and productivity which is ubiquitous at all time and space scales in the ocean must be characterized. Remote sensing from satellites addresses these problems with global observations of mesocale (2 to 20 days, 10 to 200 km) features over a long period of time.
Abbott, M. R.↗
Remote sensing in biological oceanography
The main attribute of remote sensing is seen as its ability to measure distributions over large areas on a synoptic basis and to repeat this coverage at required time periods. The way in which the Coastal Zone Color Scanner, by showing the distribution of chlorophyll a, can locate areas productive in both phytoplankton and fishes is described. Lidar techniques are discussed, and it is pointed out that lidar will increase the depth range for observations.
Esaias, W. E.↗
Unconventional photography and oceanography
High altitude and multispectral photography for studies dealing with marine biology, oceanography, and coastal processes
PHOTOGRAPHY↗
Oceanography in the next decade: Building new partnerships
The field of oceanography has existed as a major scientific discipline in the United States since World War 2, largely funded by the federal government. In this report, the Ocean Studies Board documents the state of the field of oceanography and assesses the health of the partnership between the federal government and the academic oceanography community. The objectives are to document and discuss important trends in the human, physical, and fiscal resources available to oceanographers, especially academic oceanographers, over the last decade; to present the Ocean Studies Board's best assessment of scientific opportunities in physical oceanography, marine geochemistry, marine geology and geophysics, biological oceanography, and coastal oceanography during the upcoming decade; and to provide a blueprint for more productive partnerships between academic oceanographers and federal agencies.
Source record↗
Discriminating Phytoplankton Functional Types (PFTs) in the Coastal Ocean Using the Inversion Algorithm Phydotax and Airborne Imaging Spectrometer Data
There is a need in the Biological Oceanography community to discriminate among phytoplankton groups within the bulk chlorophyll pool to understand energy flow through ecosystems, to track the fate of carbon in the ocean, and to detect and monitor-for harmful algal blooms (HABs). The ocean color community has responded to this demand with the development of phytoplankton functional type (PFT) discrimination algorithms. These PFT algorithms fall into one of three categories depending on the science application: size-based, biogeochemical function, and taxonomy. The new PFT algorithm Phytoplankton Detection with Optics (PHYDOTax) is an inversion algorithm that discriminates taxon-specific biomass to differentiate among six taxa found in the California Current System: diatoms, dinoflagellates, haptophytes, chlorophytes, cryptophytes, and cyanophytes. PHYDOTax was developed and validated in Monterey Bay, CA for the high resolution imaging spectrometer, Spectroscopic Aerial Mapping System with On-board Navigation (SAMSON - 3.5 nm resolution). PHYDOTax exploits the high spectral resolution of an imaging spectrometer and the improved spatial resolution that airborne data provides for coastal areas. The objective of this study was to apply PHYDOTax to a relatively lower resolution imaging spectrometer to test the algorithm's sensitivity to atmospheric correction, to evaluate capability with other sensors, and to determine if down-sampling spectral resolution would degrade its ability to discriminate among phytoplankton taxa. This study is a part of the larger Hyperspectral Infrared Imager (HyspIRI) airborne simulation campaign which is collecting Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) imagery aboard NASA's ER-2 aircraft during three seasons in each of two years over terrestrial and marine targets in California. Our aquatic component seeks to develop and test algorithms to retrieve water quality properties (e.g. HABs and river plumes) in both marine and in-land water bodies. Results presented are from the 10 April 2013 overflight of the Monterey Bay region and focus primarily on the first objective - sensitivity to atmospheric correction. On-going and future work will continue to evaluate if PHYDOTax can be applied to historical (SeaWiFS and MERIS), existing (MODIS, VIIRS, and HICO), and future (PACE, GEO-CAPE, and HyspIRI) satellite sensors. Demonstration of cross-platform continuity may aid in calibration and validation efforts of these sensors.
Biological Oceanography↗
Volume 35, AMT-1 Cruise Report and Preliminary Results
This report documents the scientific activities on board the Royal Research Ship (RRS) 'James Clark Ross' during the irst Atlantic Meridional Transect (AMT-1), 21 September to 24 October 1995. The ship sailed from Grimsby (England) for Montevideo (Uruguay) and then continued on to Stanley (Falkland Islands). The primary objective of the AMT program is to investigate basic biological processes in the open Atlantic Ocean over very broad spatial scales. For AMT-1, the meridional range covered was approximately 50 deg N to 50 deg S or nearly 8,000 nmi. The measurements to be taken during the AMT cruises are fundamental for the calibration, validation, and continuing understanding of remotely sensed observations of biological oceanography. They are also important for understanding plankton community structure over latitudinal scales and the role of the world ocean in global carbon cycles. During AMT-1 a variety of instruments were used to map the physical, chemical, and biological structure of the upper 200 m of the water column. Ocean color measurements were made using state-of-the-art sensors, whose calibration was traceable to the highest international standards. New advances in fluorometry were used to measure photosynthetic activity, which was then used to further interpret primary productivity. A unique set of samples and data were collected for the planktonic assemblages that vary throughout the range of the transect. These data will yield new interpretations on community composition and their role in carbon cycling. While the various provinces of the Atlantic Ocean were being crossed, the partial pressure of CO2 was related to biological productivity. This comparison revealed the areas of drawdown of atmospheric CO2 and how these areas relate to the surrounding biological productivity. These data, plus the measurements of light attenuation and phytoplankton optical properties, will be used as a primary input for basin-scale biological productivity models to help develop ecosystem dynamics models which will be important for improving the forecasting abilities of modelers. The AMT program is also attempting to meet the needs of international agencies in their implementation of Sensor Intercomparison and Merger for Biological and Interdisciplinary Ocean Studies (SIMBIOS), a program to develop a methodology and operational capability to combine data products from the various ocean color satellite missions.
Hooker, Stanford B.↗
Introduction to ocean optics
In this introductory survey of optical oceanography, the fundamental inherent and apparent optical properties of natural waters are presented. Relationships between these inherent and apparent optical properties, as related through the radiative transfer equation, are then examined. Following the first three theoretical sections, brief discussions describing the application of ocean optics to geophysics, biological oceanography, and ocean remote sensing are then presented.
Gordon, H. R.↗
Predictability of the California Current System
The physical and biological oceanography of the Southern California Bight (SCB), a highly productive subregion of the California Current System (CCS) that extends from Point Conception, California, south to Ensenada, Mexico, continues to be extensively studied. For example, the California Cooperative Oceanic Fisheries Investigations (CalCOFI) program has sampled this region for over 50 years, providing an unparalleled time series of physical and biological data. However, our understanding of what physical processes control the large-scale and mesoscale variations in these properties is incomplete. In particular, the non-synoptic and relatively coarse spatial sampling (70km) of the hydrographic grid does not completely resolve the mesoscale eddy field (Figure 1a). Moreover, these unresolved physical variations exert a dominant influence on the evolution of the ecosystem. In recent years, additional datasets that partially sample the SCB have become available. Acoustic Doppler Current Profiler (ADCP) measurements, which now sample upper-ocean velocity between stations, and sea level observations along TOPEX tracks give a more complete picture of the mesoscale variability. However, both TOPEX and ADCP are well-sampled only along the cruise or orbit tracks and coarsely sampled in time and between tracks. Surface Lagrangian drifters also sample the region, although irregularly in time and space. SeaWiFS provides estimates of upper-ocean chlorophyll-a (chl-alpha), usually giving nearly complete coverage for week-long intervals, depending on cloud coverage. Historical ocean color data from the Coastal Zone Color Scanner (CZCS) has been used extensively to determine phytoplankton patterns and variability, characterize the primary production across the SCB coastal fronts, and describe the seasonal and interannual variability in pigment concentrations. As in CalCOFI, these studies described much of the observed structures and their variability over relatively large space and time scales.
Miller, Arthur J.↗
Future fields of control application
Application of control theory to production engineering, transportation systems, urban development, biological oceanography, mass communications, and socio-economic problems
Source record↗
Introduction to ocean optics
The fundamental inherent and apparent optical properties of natural waves are reviewed and relationships between these properties, as related through the radiative transfer equation, are examined. Applications of ocean optics to geophysics, biological oceanography, and ocean remote sensing are discussed.
Gordon, H. R.↗
Influence of the Yukon River on the Bering Sea
Physical and biological oceanography of the northern Bering Sea including the influence of the Yukon River were studied. Satellite data acquired by the Advanced Very High Resolution Radiometer (AVHRR), the LANDSAT Multispectral Scanner (MSS) and the Thematic Mapper (TM) sensor were used to detect sea surface temperatures and suspended sediments. Shipboard measurements of temperature, salinity and nutrients were acquired through the Inner Shelf Transfer and Recycling (ISHTAR) project and were compared to digitally enhanced and historical satellite images. The satellite data reveal north-flowing, warm water along the Alaskan coast that is highly turbid with complex patterns of surface circulation near the Yukon River delta. To the west near the Soviet Union, cold water, derived from an upwelling, mixes with shelf water and also flows north. The cold and warm water coincide with the Anadyr, Bering Shelf and Alaskan coastal water masses. Generally, warm Alaskan coastal water forms near the coast and extends offshore as the summer progresses. Turbid water discharged by the Yukon River progresses in the same fashion but extends northward across the entrance to Norton Sound, attaining its maximum surface extent in October. The Anadyr water flows northward and around St. Lawrence Island, but its extent is highly variable and depends upon mesoscale pressure fields in the Arctic Ocean and the Bering Sea.
Dean, Kenneson G.↗
Understanding the Role of Biology in the Global Environment: NASA'S Mission to Planet Earth
NASA has long used the unique perspective of space as a means of expanding our understanding of how the Earth's environment functions. In particular, the linkages between land, air, water, and life-the elements of the Earth system-are a focus for NASA's Mission to Planet Earth. This approach, called Earth system science, blends together fields like meteorology, biology, oceanography, and atmospheric science. Mission to Planet Earth uses observations from satellites, aircraft, balloons, and ground researchers as the basis for analysis of the elements of the Earth system, the interactions between those elements, and possible changes over the coming years and decades. This information is helping scientists improve our understanding of how natural processes affect us and how we might be affecting them. Such studies will yield improved weather forecasts, tools for managing agriculture and forests, information for fishermen and local planners, and, eventually, an enhanced ability to predict how the climate will change in the future. NASA has designed Mission to Planet Earth to focus on five primary themes: Land Cover and Land Use Change; Seasonal to Interannual Climate Prediction; Natural Hazards; Long-Term Climate Variability; and Atmosphere Ozone.
Townsend, William F.↗
Ocean Color Data at the Goddard DAAC
The apparent color of the ocean is determined by the interactions of incident light with substances or particles present in the water. The most significant constituents are free-floating photosynthetic organisms (phytoplankton) and inorganic particulates. Phytoplankton contain chlorophyll, which absorbs light at blue and red wavelengths and transmits in the green. Particulate matter can reflect and absorb light, which reduces the clarity (light transmission) of the water. Substances dissolved in water can also affect its color. Observations of ocean color from space, utilizing sensors specially designed to detect the small amount of light radiating from the sea surface, provide a global picture of the patterns of biological productivity in the world's oceans. For that reason, ocean color remote sensing data is a vital resource for biological oceanography. Unlike the limited area of the ocean that can be investigated from a research ship, data from a satellite sensor covers a large region and provides a comprehensive view of the marine environment.
Source record↗
An Optical Index of Phytoplankton Photoacclimation and Its Relation to Light-Saturated Photosynthesis in the Sea
In relation to understanding ocean biology at the global scale, one of NASA's primary foci has been measurements of near-surface concentrations of phytoplankton chlorophyll. Chlorophyll is an important light-absorbing pigment in phytoplankton. The absorbed light energy is used to fix carbon in the process of photosynthesis. Photosynthesis, in turn, is critical to the growth of phytoplankton and the function of entire marine ecosystems. Thus, the use of satellite surface chlorophyll data to estimate primary production in the ocean has been a key focus of much biological oceanography research. One of the major challenges in this research is to develop relationships that allow a given chlorophyll concentration (a standing stock) to be interpreted in terms of carbon fixation (a rate). This problem centers on the description of the light-saturated photosynthetic rate, Pbmax. In this paper, we describe how optical measurements of light attenuation provide information on particulate organic carbon (POC) concentrations. We then show how the ratio of POC to chlorophyll (Theta) provides critical information on variability in Pbmax. We then test this relationship between Theta and Pbmax using field data from a variety of open ocean ecosystems.
Behrenfeld, Michael J.↗
New Particle Formation in Anthropogenic Plumes Advecting from Asia Observed During TRACE-P
The characteristics and sources of what are believed to be newly formed 3 to 4 nm particles in anthropogenic plumes advecting from Asian are reported. Airborne measurements were made from March to April 2001 as part of the NASA TRACE-P experiment at latitudes ranging from North of the Philippines to Northern Japan (20 to 45 deg. N). In the more polluted plumes, high concentrations of 3 to 4 nm diameter particles (less than 100/qu cm) were observed both within and along the upper outer edges of plumes that were identified by enhanced carbon monoxide and fine particulate sulfate concentrations. The results from two research flights are investigated in detail. Three to four-nm particle concentrations are generally correlated with gas phase sulfuric acid and found in regions of low surface areas relative to the immediate surroundings or where there are steep transitions to lower surface areas. Sulfuric acid and surface area concentrations in the most polluted plume reached 6 x l0(exp 7) and 750 micro sq m/qu cm, respectively, in regions of particle formation. In contrast to these anthropogenic plumes, few 3 to 4 nm particles were observed in the clean background and few were detected within a volcanic plume where the studies highest H2SO4 concentrations (less than lO(exp 8)/qu cm) were recorded. Enhanced SO2 concentrations in the range of approximately 2 to 7 ppb, in conjunction with other unidentified, possibly coemitted species, appear to be the driving factor for nucleation. (0345, 4801); 0322 Atmospheric Composition and Structure: Constituent sources and sinks; 0345 Atmospheric Composition and Structure: Pollution-urban and regional (0305); 4801 Oceanography: Biological and Chemical: Aerosols (0305).
Weber, R. J.↗
Oceanography from Space
Satellite photography, airborne remote sensing, and other techniques applied to oceanography, marine biology, and coastal processes - conference
SENSING↗
Entropy and charge in molecular evolution--the case of phosphate
Biopoesis, the creation of life, implies molecular evolution from simple components, randomly distributed and in a dilute state, to form highly organized, concentrated systems capable of metabolism, replication and mutation. This chain of events must involve environmental processes that can locally lower entropy in several steps; by specific selection from an indiscriminate mixture, by concentration from dilute solution, and in the case of the mineral-induced processes, by particular effectiveness in ordering and selective reaction, directed toward formation of functional biomolecules. Numerous circumstances provide support for the notion that negatively charged molecules were functionally required and geochemically available for biopoesis. Sulfite ion may have been important in bisulfite complex formation with simple aldehydes, facilitating the initial concentration by sorption of aldehydes in positively charged surface active minerals. Borate ion may have played a similar, albeit less investigated role in forming charged sugar complexes. Among anionic species, oligophosphate ions and charged phosphate esters are likely to have been of even more wide ranging importance, reflected in the continued need for phosphate in a proposed RNA world, and extending its central role to evolved biochemistry. Phosphorylation is shown to result in selective concentration by surface sorption of compounds, otherwise too dilute to support condensation reactions. It provides protection against rapid hydrolysis of sugars and, by selective concentration, induces the oligomerization of aldehydes. As a manifestation of life arisen, phosphate already appears in an organic context in the oldest preserved sedimentary record.
NASA Discipline Exobiology↗