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Results for “Block tridiagonal solver”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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12 records
All sourcesNASA NTRSDOE OSTI
DOE OSTI2014

A block-tridiagonal solver with two-level parallelization for finite element-spectral codes

Two-level parallelization is introduced to solve a massive block-tridiagonal matrix system. One-level is used for distributing blocks whose size is as large as the number of block rows due to the spectral basis, and the other level is used for parallelizing in the block row dimension. The reason for the added parallelization dimension is to retard the saturation of the scaling due to communication overhead and inefficiencies in the single-level parallelization only distributing blocks. As a technique for parallelizing the tridiagonal matrix, the combined method of “Partitioned Thomas method” and “Cyclic Odd–Even Reduction” is implemented in an MPI-Fortran90 based finite element-spectral code (TORIC) that calculates the propagation of electromagnetic waves in a tokamak. The two-level parallel solver using thousands of processors shows more than 5 times improved computation speed with the optimized processor grid compared to the single-level parallel solver under the same conditions. Three-dimensional RF field reconstructions in a tokamak are reflected as examples of the physics simulations that have been enabled by this algorithmic advance.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2023

Multigrid Reduction in Time for Chaotic and Hyperbolic Problems (Final Report)

The coming massive parallelism of exascale computing presents a pressing challenge for the many DOE simulations of time-dependent partial differential equations (PDEs), which typically use traditional sequential time stepping methods. Since this traditional approach is inherently serial, it presents a sequential bottleneck when moving to exascale computing, because future performance gains will come through greater concurrency, not faster clock speeds. Thus, the goal of this work is to research parallelism in time, i.e., methods that compute multiple time values simultaneously, not sequentially. The focus will be on hyperbolic and chaotic problems of interest to DOE, with the goal of enabling scalable simulations of time-dependent hyperbolic and chaotic problems on future architectures. The chosen methodology for solving these problems parallel-in-time is multigrid, because multigrid (when it works) is a powerful, optimal, and scalable solver for discretized PDEs. Multigrid is already commonly used in many DOE simulations for scalably and optimally solving space-only PDE problems. The areas of hyperbolic and chaotic problems are chosen because of their relevance to problems of programmatic interest to DOE. However, these problems are also well-known to be difficult for parallelin-time methods, with the most common method, parareal, diverging in many cases. The current state-of-the-art for parallel-in-time at LLNL is the multigrid reduction in time (MGRIT) XBraid package, which also struggles for such problems, while still showing some improvement over parareal. In summary, new methods are needed for an efficient parallel-in-time scheme for hyperbolic and chaotic problems, and this work shall research promising new multigrid methods in this area. In particular, this work shall continue researching the directions from the current collaboration with Dr. Falgout, which are laid out in the work Toward Parallel in Time for Chaotic Dynamical Systems and showed the first known results of a parallel-in-time speedup for a chaotic problem. This work outlines two key improvements to XBraid for chaotic problems, the so-called “theta” and “delta-correction” methods. Here, these two improvements will be implemented in a high-performance but general way in XBraid and explored for more complicated problems. We will additionally research, as time allows, improvements to these techniques, as well as multigrid relaxation techniques based on Least Squares Shadowing (LSS by Wang) and a nonintrusive block tridiagonal solver based on MGRIT, called TriMGRIT.

97 MATHEMATICS AND COMPUTING↗
NASA NTRS1983

A nonstationary relaxation method for the Cauchy-Riemann and 1-D Euler equations

The Cauchy-Riemann equations and the 1-D Euler equations are expressed in generalized coordinates and then cast in finite difference form by using central differencing throughout. The resulting matrix representation has an eigensystem that permits the development of an annihilation process using complex arithmetic in a block tridiagonal solver. Initial numerical experiments show that the process has potential for use as a relaxation procedure for the Euler equations.

Liu, Y.↗
NASA NTRS1989

Parallel Gaussian elimination of a block tridiagonal matrix using multiple microcomputers

The solution of a block tridiagonal matrix using parallel processing is demonstrated. The multiprocessor system on which results were obtained and the software environment used to program that system are described. Theoretical partitioning and resource allocation for the Gaussian elimination method used to solve the matrix are discussed. The results obtained from running 1, 2 and 3 processor versions of the block tridiagonal solver are presented. The PASCAL source code for these solvers is given in the appendix, and may be transportable to other shared memory parallel processors provided that the synchronization outlines are reproduced on the target system.

Blech, Richard A.↗
NASA NTRS1991

Navier-Stokes computation of compressible turbulent flows with a second order closure

The objective was the development of a complete second order closure for wall bounded flows, including all components of the dissipation rate tensor and a numerical solution procedure for the resulting system of equations. The main topics discussed are the closure of the pressure correlations and the viscous destruction terms in the dissipation rate equations and the numerical solution scheme based on a block-tridiagonal solver for the nine equations required for the prediction of plane or axisymmetric flows.

Dingus, C.↗
NASA NTRS1992

Adaptive explicit and implicit finite element methods for transient thermal analysis

The application of adaptive finite element methods to the solution of transient heat conduction problems in two dimensions is investigated. The computational domain is represented by an unstructured assembly of linear triangular elements and the mesh adaptation is achieved by local regeneration of the grid, using an error estimation procedure coupled to an automatic triangular mesh generator. Two alternative solution procedures are considered. In the first procedure, the solution is advanced by explicit timestepping, with domain decomposition being used to improve the computational efficiency of the method. In the second procedure, an algorithm for constructing continuous lines which pass only once through each node of the mesh is employed. The lines are used as the basis of a fully implicit method, in which the equation system is solved by line relaxation using a block tridiagonal equation solver. The numerical performance of the two procedures is compared for the analysis of a problem involving a moving heat source applied to a convectively cooled cylindrical leading edge.

Probert, E. J.↗
DOE OSTI2025

Linear Solver for Electromagnetic Simulation of General Distribution Feeders

High-fidelity electromagnetic transient (EMT) modeling is required for accurate simulation and analysis of power system dynamics in modern distribution feeders. However, the high-fidelity of EMT models often leads to significant computational challenges, particularly in terms of computational resources and simulation time. This paper investigates the development and application of a detailed EMT model for general distribution feeders, with a focus on improving computational efficiency. A direct linear solver is proposed for a bordered block diagonal (BBD) matrix structure commonly encountered in a EMT model of distribution feeders. The solver integrates the Schur complement method with the block tridiagonal matrix algorithm to enhance the computational performance. The proposed solver is validated using the primary feeder of the IEEE 342-node test system, demonstrating its accuracy and efficiency in EMT simulations. Furthermore, the solver’s performance is benchmarked against MATLAB’s built-in linear solvers, showing significant improvements in computation time while maintaining high fidelity and accuracy in simulation results.

Choi, Jongchan [ORNL] (ORCID:000000025952455X)↗
NASA NTRS1989

Some fast elliptic solvers on parallel architectures and their complexities

The discretization of separable elliptic partial differential equations leads to linear systems with special block tridiagonal matrices. Several methods are known to solve these systems, the most general of which is the Block Cyclic Reduction (BCR) algorithm which handles equations with nonconstant coefficients. A method was recently proposed to parallelize and vectorize BCR. In this paper, the mapping of BCR on distributed memory architectures is discussed, and its complexity is compared with that of other approaches including the Alternating-Direction method. A fast parallel solver is also described, based on an explicit formula for the solution, which has parallel computational compelxity lower than that of parallel BCR.

Gallopoulos, E.↗
DOE OSTI2022

Development and Analysis of Optimal Multilevel Solvers on Advanced Computers. Final Report

Constrained optimization in the context of time dependent, partial differential equations (PDE) leads to a symmetric, block-tridiagonal system of nonlinear equations that must be solved repeatedly in an iterative solution strategy. The blocks represent spatial discretization, while the connection between the blocks represents a forward and backward integration in time. The focus of this project is to apply a parallel-in-time (PiT) solution technique to the large block-triangular system.

97 MATHEMATICS AND COMPUTING↗
NASA NTRSDate not supplied

Improvements to a Batch Pentadiagonal Solver on NVIDIA GPUs

This poster presents the recent work in OVERFLOW to port the batched pentadiagonal solver to NVIDIA GPUs. There are five pentadiagonal systems for each pencil in the grid but three of these systems share the same LHS. Our first simple approach for porting the pentadiagonal solver to the GPUs was to take advantage of the shared LHS by assigning three threads to the three LHS of each pencil. We demonstrated that this custom solver was 92% faster than the NVIDIA batched pentadiagonal library implementation on a V100 GPU due to the lower memory bandwidth requirements. The second approach treated each pentadiagonal system as a 2x2 block tridiagonal system and used a variant of the parallel cyclic reduction algorithm to solve the problem. One benefit of this approach is that it does not require interleaving the data between each system. We demonstrated that this algorithm is 2.18x faster than the NVIDIA library implementation for the same amount of work. If we take advantage of our shared LHS, this approach is 2.58x faster than the library implementation on a V100 GPU.

GPU Programming↗
DOE OSTI2016

An Algebraic Multilevel Preconditioner with Low-Rank Corrections for Sparse Symmetric Matrices

In this work, we describe a multilevel preconditioning technique for solving sparse symmetric linear systems of equations. This “Multilevel Schur Low-Rank” (MSLR) preconditioner first builds a tree structure $\mathcal{T}$ based on a hierarchical decomposition of the matrix and then computes an approximate inverse of the original matrix level by level. Unlike classical direct solvers, the construction of the MSLR preconditioner follows a top-down traversal of $\mathcal{T}$ and exploits a low-rank property that is satisfied by the difference between the inverses of the local Schur complements and specific blocks of the original matrix. A few steps of the generalized Lanczos tridiagonalization procedure are applied to capture most of this difference. Numerical results are reported to illustrate the efficiency and robustness of the MSLR preconditioner with both two- and three-dimensional discretized PDE problems and with publicly available test problems.

97 MATHEMATICS AND COMPUTING↗
NASA NTRS1994

A Navier-Strokes Chimera Code on the Connection Machine CM-5: Design and Performance

We have implemented a three-dimensional compressible Navier-Stokes code on the Connection Machine CM-5. The code is set up for implicit time-stepping on single or multiple structured grids. For multiple grids and geometrically complex problems, we follow the 'chimera' approach, where flow data on one zone is interpolated onto another in the region of overlap. We will describe our design philosophy and give some timing results for the current code. A parallel machine like the CM-5 is well-suited for finite-difference methods on structured grids. The regular pattern of connections of a structured mesh maps well onto the architecture of the machine. So the first design choice, finite differences on a structured mesh, is natural. We use centered differences in space, with added artificial dissipation terms. When numerically solving the Navier-Stokes equations, there are liable to be some mesh cells near a solid body that are small in at least one direction. This mesh cell geometry can impose a very severe CFL (Courant-Friedrichs-Lewy) condition on the time step for explicit time-stepping methods. Thus, though explicit time-stepping is well-suited to the architecture of the machine, we have adopted implicit time-stepping. We have further taken the approximate factorization approach. This creates the need to solve large banded linear systems and creates the first possible barrier to an efficient algorithm. To overcome this first possible barrier we have considered two options. The first is just to solve the banded linear systems with data spread over the whole machine, using whatever fast method is available. This option is adequate for solving scalar tridiagonal systems, but for scalar pentadiagonal or block tridiagonal systems it is somewhat slower than desired. The second option is to 'transpose' the flow and geometry variables as part of the time-stepping process: Start with x-lines of data in-processor. Form explicit terms in x, then transpose so y-lines of data are in-processor. Form explicit terms in y, then transpose so z-lines are in processor. Form explicit terms in z, then solve linear systems in the z-direction. Transpose to the y-direction, then solve linear systems in the y-direction. Finally transpose to the x direction and solve linear systems in the x-direction. This strategy avoids inter-processor communication when differencing and solving linear systems, but requires a large amount of communication when doing the transposes. The transpose method is more efficient than the non-transpose strategy when dealing with scalar pentadiagonal or block tridiagonal systems. For handling geometrically complex problems the chimera strategy was adopted. For multiple zone cases we compute on each zone sequentially (using the whole parallel machine), then send the chimera interpolation data to a distributed data structure (array) laid out over the whole machine. This information transfer implies an irregular communication pattern, and is the second possible barrier to an efficient algorithm. We have implemented these ideas on the CM-5 using CMF (Connection Machine Fortran), a data parallel language which combines elements of Fortran 90 and certain extensions, and which bears a strong similarity to High Performance Fortran. We make use of the Connection Machine Scientific Software Library (CMSSL) for the linear solver and array transpose operations.

Jespersen, Dennis C.↗