Search NASA⌕ Search

SEARCH · Search NASA

Results for “EAV”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 19 records
All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

Demonstrating the importance of porcine reproductive and respiratory syndrome virus papain-like protease 2 deubiquitinating activity in viral replication by structure-guided mutagenesis

Deubiquitination of cellular substrates by viral proteases is a mechanism used to interfere with host cellular signaling processes, shared between members of the coronavirus- and arterivirus families. In the case of Arteriviruses, deubiquitinating and polyprotein processing activities are accomplished by the virus-encoded papain-like protease 2 (PLP2). Several studies have implicated the deubiquitinating activity of the porcine reproductive and respiratory syndrome virus (PRRSV) PLP2 in the downregulation of cellular interferon production, however to date, the only arterivirus PLP2 structure described is that of equine arteritis virus (EAV), a distantly related virus. Here we describe the first crystal structure of the PRRSV PLP2 domain both in the presence and absence of its ubiquitin substrate, which reveals unique structural differences in this viral domain compared to PLP2 from EAV. To probe the role of PRRSV PLP2 deubiquitinating activity in host immune evasion, we selectively removed this activity from the domain by mutagenesis and found that the viral domain could no longer downregulate cellular interferon production. Interestingly, unlike EAV, and also unlike the situation for MERS-CoV, we found that recombinant PRRSV carrying PLP2 DUB-specific mutations faces significant selective pressure to revert to wild-type virus in MARC-145 cells, suggesting that the PLP2 DUB activity, which in PRRSV is present as three different versions of viral protein nsp2 expressed during infection, is critically important for PRRSV replication.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2020

Multiple biomarkers highlight the importance of water column processes in treatment wetland organic matter cycling

A suite of biomarkers, including amino acids, pigments, and lignin phenols coupled with high resolution mass spectrometry were used to evaluate differences in the sources and fate of organic matter (OM) in Everglades treatment wetlands as a model for OM cycling in shallow water wetlands. Five components of the system (water column particulate organic matter, vertical traps, flocculent material, periphyton, and surface soil) were assessed for OM transformations down-profile (i.e. water column to soil) and between treatment cells dominated by emergent aquatic vegetation (EAV) and submerged aquatic vegetation (SAV), with comparisons to reference sites that resemble historic Everglades conditions. We found that OM cycling is fundamentally different between EAV and SAV wetlands, and that SAV wetlands have some shared characteristics with similar habitats in the Everglades. Other than locations densely populated by Typha spp., water column particulate organic C was derived from microbial/cryptomonad sources, rather than macroscopic sources (vascular plants and algal mats). Bacterial amino acid biomarkers were positively correlated with amino acid degradation indices and organic P (Po), respectively suggesting that microbial abundance is associated with "fresher" OM, and that further investigation into relationships between microbial biomass and Po is warranted. Overall, this multi-biomarker approach can evaluate the relative "freshness" of OM pools, identify sources of OM, and highlight the importance of water column processes in shallow water wetlands.

treatment wetlands, organic matter, Everglades, am↗
DOE OSTI2023

Early glacier advance in New Zealand during the Antarctic Cold Reversal

ABSTRACT Glacial landscapes preserve records of past climate change. Investigating the glacier–climate system over the Late Quaternary provides information about past climate change and context for present‐day glacier response to climate warming. Using 28 beryllium‐10 ( 10 Be) surface exposure dates and snowline reconstructions, we present glacier fluctuations and climate changes for the Antarctic Cold Reversal in the Ahuriri River catchment, Southern Alps of New Zealand (44°7′50″S, 169°38′29″E). Prominent terminal and lateral moraine features from the upper right tributary of the Ahuriri River valley have exposure ages of 14.5 ± 0.3, 13.6 ± 0.3 and 12.6 ± 0.2 ka, suggesting retreat of the glacier during the Antarctic Cold Reversal. Maximum elevation of lateral moraines (MELM) and accumulation area ratio (AAR) suggest snowline elevations at these ages were ≤700, ≤630 and ~360 m lower than today, respectively. This equates to air temperatures ≤3.9, ≤3.5 and 2.3 ± 0.7 °C lower than today (1981–2010), assuming no changes in past precipitation. Ice‐sculpted bedrock surfaces bound by a lateral moraine at nearby Canyon Creek have an age of 13.1 ± 0.3 ka, indicating the moraine correlates with those in the Ahuriri upper right tributary. MELM and AAR reconstructions from the Canyon Creek suggest that snowline elevations at 14.5–13.6 ka were ≤500 or ~380 m lower than today, corresponding to air temperatures ≤2.8 or 2.4 ± 0.7 °C lower than the present‐day (1981–2010). Our results provide insight into the structure of the Antarctic Cold Reversal in the Southern Alps, showing that the largest glacier advance occurred at the start of this interval at c . 14.5 ± 0.3 ka and was followed by gradual retreat. We hypothesize that the early cooling and glacier readvance in New Zealand at the onset of the Antarctic Cold Reversal were triggered by a latitudinal shift of the Southern Hemisphere westerly wind belt.

58 GEOSCIENCES↗
DOE OSTI2023

The age and potential causes of the giant Green Lake Landslide, Fiordland, New Zealand

Abstract Landslide deposits preserved in the geological record afford opportunities to better inform hillslope and seismic hazard and risk models, particularly in regions where observational records are short. In the Southern Alps of New Zealand, small coseismic landslides are frequent, but the geological record preserves several instances of more substantial (> 1 km 3 ) but infrequent mass failures. With an estimated volume of 27 km 3 , the giant Green Lake Landslide represents one of the largest subaerial landslides on Earth. Previous work has suggested this deep-seated mass movement was most likely triggered by high-intensity seismic shaking, but that local structural weakness and/or glacial debuttressing may help to explain the anomalously large failure volume. Resolving the potential contribution of the latter is important given predictions concerning alpine deglaciation in the coming decades to centuries. Key to resolution are secure chronologies of landslide emplacement and past glacier change. Here we present in situ cosmogenic 10 Be exposure ages from the Green Lake Landslide that suggest an emplacement age of 15.5 ± 0.7 ka. Recent work shows that glacial retreat in the region was underway by 19 ka, indicating that the Green Lake Landslide was emplaced 3–4 kyr after the onset of glacier retreat. Given the geometry of the former confining valley glacier, we expect that the deglaciation-landslide age gap is closer to the upper end of this estimate. If correct, this conclusion places greater weight on the roles of local geological structure and/or a great earthquake as factors contributing to the exceptionally large volume of this event.

58 GEOSCIENCES↗
DOE OSTI2021

The Modernization of Radiation Therapy Services in Cambodia: A Model of International Collaboration

Cambodia is a Southeast Asian low-middle-income country with a population of >15 million. In 2020, Cambodia was estimated to have 18,375 new diagnoses of cancer and 12,638 deaths attributable to cancer. Cambodia was estimated to have a deficit of 16 megavoltage machines in 2012. Cambodia's radiation therapy services have suffered through the tumultuous events of the country's history, with intermittent services until the last decade. In recent years, Cambodia has undergone rapid economic growth and, with this, the development of its first comprehensive cancer center, the National Cancer Centre (NCC).

62 RADIOLOGY AND NUCLEAR MEDICINE↗
DOE OSTI2021

Local summer insolation and greenhouse gas forcing drove warming and glacier retreat in New Zealand during the Holocene

Geological climate archives from the Holocene Epoch provide baseline information concerning natural climate variability. Temperate mountain glacier extent is sensitive to summer air temperature, thus geological records of past glacier length changes are a useful proxy for this climatic variable. Here we present a new cosmogenic 10 Be chronology of glacier length changes at Dart Glacier in the Southern Alps, New Zealand. Prominent moraines deposited 321 ± 44 yr ago (n = 11) and 7.8 ± 0.3 ka (n = 5) show glaciers during the Little Ice Age were less extensive than during the early Holocene. This pattern of net Holocene glacier retreat is consistent with emerging data from other catchments in New Zealand and across the southern mid-latitudes. Using the physical framework of a transient global climate model simulation, we suggest that cool summers in the early Holocene were promoted by the local summer insolation minimum, together with low atmospheric greenhouse gas concentrations, causing an early Holocene austral glacial maximum. An insolation-driven reduction in seasonality at southern mid-latitudes may reconcile differences between early Holocene temperature reconstructions where climate proxies have different seasonal sensitivities. Furthermore, we suggest that rising greenhouse gas concentrations after 7 ka caused regional-scale glacier retreat and appear to be the dominant driver of multi-millennial summer temperature trends in the southern mid-latitudes during the present interglacial.

58 GEOSCIENCES↗
DOE OSTI2021

Climate reconstructions for the Last Glacial Maximum from a simple cirque glacier in Fiordland, New Zealand

Mountain glacier records offer important constraints on the timing and magnitude of climate variability during the last glacial cycle. Existing moraine chronologies from the central Southern Alps indicate maximum ice extent was achieved during marine isotope stages 3–4, followed by repeated advances of similar, but gradually declining extent during marine isotope stage 2, until onset of the glacial termination. Questions remain over the precise role of climate in driving these changes, as most existing moraine chronologies come from large, complex former valley glacier systems, where non-climatic influences such as changing bed topography and proglacial lake formation may have influenced glacier length changes. In this work, we address this problem via a new cosmogenic 10Be chronology and equilibrium line altitude reconstruction from a cirque glacier situated in Fiordland, New Zealand. Our chronology shows moraine deposition at 32 ± 11 ka, 18.7 ± 0.2 ka, 18.1 ± 0.1 ka, and c. 17.2 ± 0.3 ka. The simple geometry of the former glacier supports the role of climate in driving a net decline of regional ice volume during marine isotope stages 3–2. Close spacing and good preservation of the 19–17 ka moraines permits 2D glacier reconstruction which suggests the equilibrium line altitude remained depressed by c.1130 m (equivalent to 5.8 ± 0.6 °C colder than present) during this interval. Onset of warming after 17.2 ± 0.2 ka is consistent with climate proxy evidence for a sustained southward shift in the southern westerly winds, which may have promoted deglaciation via shifting ocean currents and promoting increases in atmospheric carbon dioxide.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Cosmogenic 10Be constraints on deglacial snowline rise in the Southern Alps, New Zealand

We report geochronological dating of glacial landforms, such as terminal and lateral moraines, is useful for determining the extent and timing of past glaciation and for reconstructing the magnitude and rate of past climate changes. In the Southern Alps of New Zealand, well-dated glacial geomorphological records constrain the last glacial cycle across much of the Waitaki River basin (e.g. Ōhau, Pukaki, Tekapo) but its southern sector such as the Ahuriri River valley remains comparatively unconstrained. Recently, there has been debate on the scale and rapidity of mountain glacier retreat during the last glacial termination, particularly the 20–17 ka period in New Zealand. Missing from this debate is well-constrained equilibrium-line altitude (ELA) and associated temperature reconstructions, particularly over the period around 17 ka, which can help us to develop a more complete picture of how past temperature changes drove glacier retreat. Here we report the first glacial chronology dataset from the Last Glacial Maximum (LGM) and subsequent deglaciation from the Ahuriri River valley, Southern Alps, New Zealand (44°23'54"S, 169°39'48"E) based on 38 beryllium-10 ( 10 Be) surface-exposure ages from terminal moraine systems and glaciated bedrock situated at the lower and middle sections of the valley. Our results show that the former Ahuriri Glacier reached its maximum extent at 19.8 ± 0.3 ka, which coincides with the global Last Glacial Maximum. By 16.7 ± 0.3 ka, the glacier had retreat ~18 km up-valley suggesting at least ~43% glacier-length loss relative to its full LGM extent. This deglaciation was accompanied by the formation of a shallow proglacial lake. Using the accumulation area ratio (AAR) method, we estimate that the ELA was lower than present by ~880 m (~1120 m a.s.l.) at 19.8 ± 0.3 ka, and ~770 m lower (~1230 m a.s.l.) at 16.7 ± 0.3 ka. Applying an estimate for temperature lapse rate, this ELA anomaly implies that local air temperature was 5 ± 1 °C colder than present (1981–2010) at 19.8 ± 0.3 ka, while it was 4.4 ± 0.9 °C colder at 16.7 ± 0.3 ka, assuming no change in precipitation. The substantial glacier retreat in response to a relatively small accompanying increases in ELA (110 m) and temperature (0.6 °C) may have been a result of the high glacier-length sensitivity of this glacier system due to its low gradient of former ice surface. Our low warming estimate differs markedly from other deglaciation studies, specifically from Rakaia River valley, which reports a much larger temperature increase at the onset of the last deglaciation. This precisely-dated moraine record along with reconstructed ELA as proxies for atmospheric conditions, provides new insight into post LGM glacier behaviour and climate conditions in New Zealand.

58 GEOSCIENCES↗
DOE OSTI2024

Competition between Water–Water Hydrogen Bonds and Water–π Bonds in Pyrene–Water Cluster Anions

We present infrared spectra and density functional theory calculations of hydrated pyrene anion clusters with up to four water molecules. The experimental spectra were acquired using infrared Ar messenger photodissociation spectroscopy. Water molecules form clusters on the surface of the pyrene, forming hydrogen bonds with the pi-system. The structures of the water clusters and their interaction with the π-system are encoded in the OH stretching vibrational modes. Here, we find that the interactions between water molecules are stronger than they are between water molecules and the π-system. While all clusters show multiple conformers, three- and four-membered rings are the lowest energy structures in the larger hydrates.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2025

Formation of Water Networks on Anionic Perylene

We present infrared photodissociation spectra of hydrated perylene anion clusters with up to four water molecules, as well as electronic structure calculations based on density functional theory. Water molecules form weak hydrogen bonds to the π system of the perylene anion. For clusters with more than one water molecule, water−water hydrogen bonds are formed, which generally appear to be stronger than water−π hydrogen bonds, especially for the trihydrate and tetrahydrate. The resulting water networks exist as water subclusters on the surface of the carbon frame of perylene. Here, we observe temperature-dependent dynamic effects, which highlight large amplitude motions of the water network and the shallowness of the potential energy surfaces governing the structures of these clusters.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2024

Water–Hydrocarbon Interactions in Anionic Pyrene Monohydrate

Interactions between water and polycyclic aromatic hydrocarbons are essential in many aspects of chemistry, from interstellar and atmospheric processes to interfacial hydrophobicity and wetting phenomena. Despite their growing importance, the intermolecular potentials of the water-hydrocarbon interactions are underdeveloped compared to water-water potentials, and there are similarly few experimental probes that are sensitive to the details of the water-hydrocarbon potential. We present a combined experimental and computational study of anionic pyrene monohydrate, one of the simplest water/hydrocarbon clusters. The action spectrum in the OH region of the mass-selected cluster ion provides a rigorous benchmark for intermolecular potentials and computational methodologies. We identify missing intermolecular interactions and shortcomings in conventional dynamics calculations by comparing experimental data to density functional theory and classical molecular dynamics calculations. Kinetic trapping is prevalent, even for one water molecule and one pyrene molecule, leading to slow equilibration in conventional molecular dynamics calculations, even on nanosecond timescales and at low temperatures (50 K). At constant energy, temperature fluctuations for the pair of molecules are substantial. Immersing the system in a bath of soft spheres and employing parallel tempering alleviates kinetic trapping and dampens temperature fluctuations, bringing the system closer to the thermodynamic limit. With such augmented sampling, a simple, flexible water model reproduces the linewidth and the asymmetric broadening of the symmetric OH stretching mode, which we assign to spectral diffusion. In the OH stretching region, dynamics calculations predict a more intense antisymmetric peak than experiments observe but do not predict the bimodal split symmetric peak that the experiments show. Furthermore, our work suggests that electronic polarization, missing in the empirical force field, is responsible for the first discrepancy and that quantum nuclear effects, captured neither in density functional theory nor in classical dynamics, may be responsible for the second.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2025

Tetracene Functionalized Si(111) Achieves Enhanced Solar-to-Chemical Energy Conversion via Molecular Acceptor States

The properties of semiconductor|liquid interfaces play a critical role in determining the efficiency of solar-to-hydrogen (STH) conversion. Here, we investigate how molecular functionalization of Si(111) and Si(111)|TiO 2 surfaces impacts photoelectrochemical (PEC) hydrogen production efficiency. We find that functionalization of ∼3% of the atop sites of Si(111) with either 9-anthracene (Anth) or 5-tetracene (Tet), with the remaining sites passivated by methyl groups, provides substrates with high electronic quality and low surface oxide densities, as determined by X-ray photoelectron spectroscopy (XPS) measurements. Surface photovoltage (SPV) spectroscopy shows that surfaces modified with Anth or Tet exhibit an increased photovoltage, with Tet-functionalized surfaces yielding an additional 192 meV relative to methyl-terminated Si(111), indicating improved charge separation for Si-Tet. Further improvement in onset potential was achieved by replacing a nitrogen-containing TiO 2 atomic layer deposition (ALD) precursor (TDMAT) with a precursor lacking nitrogen (TTIP), which eliminates the parasitic defect band in the TiO 2 overlayer (p-Si(111)-Tet|TTIP-TiO 2 |Pt: V OC = +0.283 ± 0.041 V vs RHE). Density functional theory (DFT) analysis demonstrates that compared with Anth-modified Si(111), the Tet-modified surface exhibits more hybridized Si(111)-Tet states closer to the silicon band edges. Mercury contact current–voltage (I–V, dark) measurements quantified the relative interfacial density of states of Si-Tet, Si-Anth and Si-Me surfaces─revealing that the interfacial state density was highest for Si-Tet. This suggests that such hybridized interfaces serve to capture better photoexcited charge, which enables facile electron transfer to molecular acceptors in solution. Altogether, the data indicate that beneficial hybrid molecular LUMO surface states interacting with the Si conduction band edge results in improved hydrogen evolution (HER) performance for p-Si devices.

Group theory↗
DOE OSTI2023

Entangled spin-polarized excitons from singlet fission in a rigid dimer

Abstract Singlet fission, a process that splits a singlet exciton into a biexciton, has promise in quantum information. We report time-resolved electron paramagnetic resonance measurements on a conformationally well-defined acene dimer molecule, TIPS-BP1', designed to exhibit strongly state-selective relaxation to specific magnetic spin sublevels. The resulting optically pumped spin polarization is a nearly pure initial state from the ensemble. The long-lived spin coherences modulate the signal intrinsically, allowing a measurement scheme that substantially removes noise and uncertainty in the magnetic resonance spectra. A nonadiabatic transition theory with a minimal number of spectroscopic parameters allows the quantitative assignment and interpretation of the spectra. In this work, we show that the rigid dimer TIPS-BP1' supports persistent spin coherences at temperatures far higher than those used in conventional superconducting quantum hardware.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2020

Singlet fission for quantum information and quantum computing: the parallel JDE model

Abstract Singlet fission is a photoconversion process that generates a doubly excited, maximally spin entangled pair state. This state has applications to quantum information and computing that are only beginning to be realized. In this article, we construct and analyze a spin-exciton hamiltonian to describe the dynamics of the two-triplet state. We find the selection rules that connect the doubly excited, spin-singlet state to the manifold of quintet states and comment on the mechanism and conditions for the transition into formally independent triplets. For adjacent dimers that are oriented and immobilized in an inert host, singlet fission can be strongly state-selective. We make predictions for electron paramagnetic resonance experiments and analyze experimental data from recent literature. Our results give conditions for which magnetic resonance pulses can drive transitions between optically polarized magnetic sublevels of the two-exciton states, making it possible to realize quantum gates at room temperature in these systems.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗