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At least 19 records
All sourcesNASA NTRSDOE OSTI
NASA NTRS2004

Southeast Ecological Observatory Network (SEEON) Workshop on Ecological Sensors and Information Technology. Report on Second SEEON Workshop

A fundamental goal of the new National Science Foundation (NSF) initiative National Ecological Observatory Network (NEON) is to provide timely and broad access to the ecological data collected at NEON sites. Information management and data collection will be critical components to achieving this goal and a successful NEON implementation. The Southeast Ecological Observatory Network (SEEON) working group recognized the importance of information management and sensor technology in its first planning workshop and recommended that interested parties in the region come together to discuss these subjects in the context of the needs and capabilities of a southeast regional ecological observatory network. In February 2004, 28 participants from 14 organizations including academic institutions, state and federal agencies, private and non-profit entities convened at the Space Life Sciences Laboratory (SLSL) at the Kennedy Space Center, Florida for two days of presentations and discussions on ecological sensors and information management. Some of the participants were previously involved in the first SEEON workshop or other meetings concerned with NEON, but many were somewhat new to the NEON community. Each day focused on a different technical component, i.e. ecological sensors the first day and cyber-infrastructure the second day, and were structured in a similar manner. The mornings were devoted to presentations by experts to help stimulate discussions on aspects of the focal topic held in the afternoon. The formal and informal discussions held during the workshop succeeded in validating some concerns and needs identified in the first SEEON workshop, but also served to bring to light other questions or issues that will need to be addressed as the NEON planning and design stages move forward. While the expansion of the SEEON community meant that some of the presentation and discussion time was needed to help bring the newcomers up to speed on the goals, objectives and current status of the various NEON efforts, the additional perspectives and technical expertise included in this workshop helped fuel some valuable interdisciplinary discussions that will need to continue to bring SEEON and NEON to fruition. Participants agreed that continued discussions of SEEON are needed , to keep up the momentum and that the southeast region must continue to be represented at the national level. It is vital that the all'the regions continue to push things forward for NEON to succeed.

Jones, Lori N.↗
NASA NTRS2019

The Terrestrial Organism and Biogeochemistry Spatial Sampling Design for the National Ecological Observatory Network

The National Ecological Observatory Network (NEON) seeks to facilitate ecological prediction at a continental scale by measuring processes that drive change and responses at sites across the United States for thirty years. The spatial distribution of observations of terrestrial organisms and soil within NEON sites is determined according to a “design‐based” sample design that relies on the randomization of sampling locations. Development of the sample design was guided by high‐level NEON objectives and the multitude of data products that will be subjected to numerous analytical approaches to address the causes and consequences of ecological change. A requirement framework permeates the NEON design, ensuring traceability from each facet of the design to the high‐level requirements that make the NEON mission statement actionable. Requirements were developed for the terrestrial sample design to guide the key components of the design: Randomizing the sample locations ensures the unbiased collection of data, is appropriate for organisms and soil, and provides data suitable for a variety of analyses. Stratification increases efficiency and allows sampling to focus on those parts of the landscape measured by other NEON observation platforms. Attention to the sample size and spatial plot allocation ensures that data products will be sufficient to inform questions asked of the data and the NEON objectives. Establishing a framework with the capacity for re‐evaluate and design iteration allows for adaption to unexpected challenges and optimization of the sample design based on early data returns. The utility of the NEON sampling design is highlighted by its application across terrestrial systems. The data generated from this unique design will be used to quantify patterns in: the abundance and diversity of small mammals, breeding birds, insects, and soil microbes; vegetation structure, biomass, productivity, and diversity; and soil biogeochemistry.

National Ecological Observatory Network↗
NASA NTRS2016

The Plant Phenology Monitoring Design for the National Ecological Observatory Network

Phenology is an integrative science that comprises the study of recurring biological activities or events. In an era of rapidly changing climate, the relationship between the timing of those events and environmental cues such as temperature, snowmelt, water availability, or day length are of particular interest. This article provides an overview of the observer-based plant phenology sampling conducted by the U.S. National Ecological Observatory Network (NEON), the resulting data, and the rationale behind the design. Trained technicians will conduct regular in situ observations of plant phenology at all terrestrial NEON sites for the 30-yr life of the observatory. Standardized and coordinated data across the network of sites can be used to quantify the direction and magnitude of the relationships between phenology and environmental forcings, as well as the degree to which these relationships vary among sites, among species, among phenophases, and through time. Vegetation at NEON sites will also be monitored with tower-based cameras, satellite remote sensing, and annual high-resolution airborne remote sensing. Ground-based measurements can be used to calibrate and improve satellite-derived phenometrics. NEON's phenology monitoring design is complementary to existing phenology research efforts and citizen science initiatives throughout the world and will produce interoperable data. By collocating plant phenology observations with a suite of additional meteorological, biophysical, and ecological measurements (e.g., climate, carbon flux, plant productivity, population dynamics of consumers) at 47 terrestrial sites, the NEON design will enable continental-scale inference about the status, trends, causes, and ecological consequences of phenological change.

phenology↗
NASA NTRS2020

Exploring Carbon Mineral Systems: Recent Advances in C Mineral Evolution, Mineral Ecology, and Network Analysis

Large and growing data resources on the spatial and temporal diversity and distribution of the more than 400 carbon-bearing mineral species reveal patterns of mineral evolution and ecology. Recent advances in analytical and visualization techniques leverage these data and are propelling mineralogy from a largely descriptive field into one of prediction within complex, integrated, multidimensional systems. These discoveries include: (1) systematic changes in the character of carbon minerals and their networks of coexisting species through deep time; (2) improved statistical predictions of the number and types of carbon minerals that occur on Earth but are yet to be discovered and described; and (3) a range of proposed and ongoing studies related to the quantification of network structures and trends, relation of mineral “natural kinds” to their genetic environments, prediction of the location of mineral species across the globe, examination of the tectonic drivers of mineralization through deep time, quantification of preservational and sampling bias in the mineralogical record, and characterization of feedback relationships between minerals and geochemical environments with microbial populations. These aspects of Earth’s carbon mineralogy underscore the complex coevolution of the geosphere and biosphere and highlight the possibility for scientific discovery in Earth and planetary systems.

Carbon↗
NASA NTRS1997

Pre-Launch Tasks Proposed in our Contract of December 1991

We propose, during the pre-EOS phase to: (1) develop, with other MODIS Team Members, a means of discriminating different major biome types with NDVI and other AVHRR-based data. (2) develop a simple ecosystem process model for each of these biomes, BIOME-BGC (3) relate the seasonal trend of weekly composite NDVI to vegetation phenology and temperature limits to develop a satellite defined growing season for vegetation; and (4) define physiologically based energy to mass conversion factors for carbon and water for each biome. Our final core at-launch product will be simplified, completely satellite driven biome specific models for net primary production. We will build these biome specific satellite driven algorithms using a family of simple ecosystem process models as calibration models, collectively called BIOME-BGC, and establish coordination with an existing network of ecological study sites in order to test and validate these products. Field datasets will then be available for both BIOME-BGC development and testing, use for algorithm developments of other MODIS Team Members, and ultimately be our first test point for MODIS land vegetation products upon launch. We will use field sites from the National Science Foundation Long-Term Ecological Research network, and develop Glacier National Park as a major site for intensive validation.

Running, Steven W.↗
NASA NTRS1998

Pre-Launch Tasks Proposed in our Contract of December 1991

We propose, during the pre-EOS phase to: (1) develop, with other MODIS Team Members, a means of discriminating different major biome types with NDVI and other AVHRR-based data; (2) develop a simple ecosystem process model for each of these biomes, BIOME-BGC; (3) relate the seasonal trend of weekly composite NDVI to vegetation phenology and temperature limits to develop a satellite defined growing season for vegetation; and (4) define physiologically based energy to mass conversion factors for carbon and water for each biome. Our final core at-launch product will be simplified, completely satellite driven biome specific models for net primary production. We will build these biome specific satellite driven algorithms using a family of simple ecosystem process models as calibration models, collectively called BIOME-BGC, and establish coordination with an existing network of ecological study sites in order to test and validate these products. Field datasets will then be available for both BIOME-BGC development and testing, use for algorithm developments of other MODIS Team Members, and ultimately be our first test point for MODIS land vegetation products upon launch. We will use field sites from the National Science Foundation Long-Term Ecological Research network, and develop Glacier National Park as a major site for intensive validation.

Source record↗
NASA NTRS2017

Monitoring Land Surface Albedo and Vegetation Dynamics Using High Spatial and Temporal Resolution Synthetic Time Series from Landsat and the MODIS BRDF/NBAR/Albedo Product

Seasonal vegetation phenology can significantly alter surface albedo which in turn affects the global energy balance and the albedo warmingcooling feedbacks that impact climate change. To monitor and quantify the surface dynamics of heterogeneous landscapes, high temporal and spatial resolution synthetic time series of albedo and the enhanced vegetation index (EVI) were generated from the 500-meter Moderate Resolution Imaging Spectroradiometer (MODIS) operational Collection V006 daily BRDF (Bidirectional Reflectance Distribution Function) / NBAR (Nadir BRDF-Adjusted Reflectance) / albedo products and 30-meter Landsat 5 albedo and near-nadir reflectance data through the use of the Spatial and Temporal Adaptive Reflectance Fusion Model (STARFM). The traditional Landsat Albedo (Shuai et al., 2011) makes use of the MODIS BRDFAlbedo products (MCD43) by assigning appropriate BRDFs from coincident MODIS products to each Landsat image to generate a 30-meter Landsat albedo product for that acquisition date. The available cloud free Landsat 5 albedos (due to clouds, generated every 16 days at best) were used in conjunction with the daily MODIS albedos to determine the appropriate 30-meter albedos for the intervening daily time steps in this study. These enhanced daily 30-meter spatial resolution synthetic time series were then used to track albedo and vegetation phenology dynamics over three Ameriflux tower sites (Harvard Forest in 2007, Santa Rita in 2011 and Walker Branch in 2005). These Ameriflux sites were chosen as they are all quite nearby new towers coming on line for the National Ecological Observatory Network (NEON), and thus represent locations which will be served by spatially paired albedo measures in the near future. The availability of data from the NEON towers will greatly expand the sources of tower albedometer data available for evaluation of satellite products. At these three Ameriflux tower sites the synthetic time series of broadband shortwave albedos were evaluated using the tower albedo measurements with a Root Mean Square Error (RMSE) less than 0.013 and a bias within the range of 0.006. These synthetic time series provide much greater spatial detail than the 500 meter gridded MODIS data, especially over more heterogeneous surfaces, which improves the efforts to characterize and monitor the spatial variation across species and communities. The mean of the difference between maximum and minimum synthetic time series of albedo within the MODIS pixels over a subset of satellite data of Harvard Forest (16 kilometers by 14 kilometers) was as high as 0.2 during the snow-covered period and reduced to around 0.1 during the snow-free period. Similarly, we have used STARFM to also couple MODIS Nadir BRDF-Adjusted Reflectances (NBAR) values with Landsat 5 reflectances to generate daily synthetic times series of NBAR and thus Enhanced Vegetation Index (NBAR-EVI) at a 30-meter resolution. While normally STARFM is used with directional reflectances, the use of the view angle corrected daily MODIS NBAR values will provide more consistent time series. These synthetic times series of EVI are shown to capture seasonal vegetation dynamics with finer spatial and temporal details, especially over heterogeneous land surfaces.

Vegetation Index↗
NASA NTRS2017

A Probabilistic Method of Assessing Carbon Accumulation Rate at Imnavait Creek Peatland, Arctic Long Term Ecological Research Station, Alaska

Arctic peatlands are an important part of the global carbon cycle, accumulating atmospheric carbon as organic matter since the Late glacial. Current methods for understanding the changing efficiency of the peatland carbon sink rely on peatlands with an undisturbed stratigraphy. Here we present a method of estimating primary carbon accumulation rate from a site where permafrost processes have either vertically or horizontally translocated nearby carbon-rich sediment out of stratigraphic order. Briefly, our new algorithm estimates the probability of the age of deposition of a random increment of sediment in the core. The method assumes that if sediment age is measured at even depth increments, dates are more likely to occur during intervals of higher accumulation rate and vice versa. Multiplying estimated sedimentation rate by measured carbon density yields carbon accumulation rate. We perform this analysis at the Imnavait Creek Peatland, near the Arctic Long Term Ecological Research network site at Toolik Lake, Alaska. Using classical radiocarbon age modeling, we find unreasonably high rates of carbon accumulation at various Holocene intervals. With our new method, we find accumulation rate changes that are in improved agreement within the context of other sites throughout Alaska and the rest of the Circum-Arctic region.

carbon accumulation;Imnavait;peatlands;permafrost;↗
NASA NTRSDate not supplied

TPSAS-NF1676L-31944-DND

The Plum Island Estuary (PIE) in Massachusetts is New England’s largest salt marsh. This dynamic ecosystem plays an important role in the surrounding communities by providing ecosystem and social services, acting as a center for education, research, and recreation. However, marshes around the world are threatened by sea level rise. As the equilibrium between sediment supply, erosion rates, and vegetation growth is unbalanced by rising waters, marshes are liable to recede, or even drown. Because sediment is so crucial, researchers use sediment budgets as a metric to assess Plum Island Estuary’s vulnerability to rising seas; however, established data collection methods are limited in scope. The project employed five years of imagery from Landsat 8 Operational Land Imager (OLI) and three years of imagery from Sentinel-2 Multispectral Instrument (MSI), in conjunction with in situ data, to generate and refine a local algorithm that derives suspended sediment concentration from remote sensing reflectance. This information was applied to a flux model to analyze transport patterns and possible sediment sources, particularly the Merrimack River. The use of remote sensing techniques will provide our partners at the US Geological Survey, US Fish and Wildlife Service, and Plum Island Ecosystems Long Term Ecological Research Network with higher spatial and temporal resolution data, which will allow for the development of more effective management practices.

Sydney Neugebauer↗
NASA NTRSDate not supplied

Validation of Remotely Sensed and Modeled Soil Moisture at Forested and Unforested Sites

Soil moisture is an important driver for forest ecosystems, influencing fire occurrence and extent, insect and pathogen impacts, and tree growth, which creates a need for regular, globally extensive soil moisture information that only satellite-based sensors or models can achieve. However, the reliability of soil moisture measurements in forests is not well understood due to a lack of suitable validation sites (especially relative to unforested ecosystems) and interference caused by high vegetation water content on remotely sensed measurements; although recent studies have started to address this gap [1], [2], [3], [4]. Here we validate the performance of multiyear remotely sensed (SMAP/Sentinel), remotely sensed data assimilation modelled (SMAP-L4), and modelled (NLDAS) surface and root zone (0-1 m) soil moisture datasets with data from in-situ sensors at 39 National Ecological Observatory Network (NEON) sites throughout the contiguous US. Due to differences in spatial resolution, NEON soil moisture (~0.2 km measurement zone) correlations were expected to be stronger with the SMAP/Sentinel product (3 km resolution) than with coarser resolution SMAP-L4 (9 km resolution) or NLDAS products (13 km resolution). However, given the sensitivity of satellite measurements to vegetation water content we expected a deterioration in the correlations based on remotely sensed measurements (SMAP/Sentinel and SMAP-L4) as aboveground biomass increased, whereas the model-based data (NLDAS) was expected to be largely insensitive to vegetation type. We recognize that the SMAP/Sentinel product was developed for unforested regions, therefore our application is outside its primary use case. Soil moisture is measured at up to 8 depths in five soil plots spaced up to 40 m apart at each NEON terrestrial site. Correlation parameters were calculated for the three remotely sensed and modelled data products relative to in-situ measurement following Entekhabi et al. [5]. The datasets comprised 94 (SMAP-L4), 28 (SMAP/Sentinel), and 106 (NLDAS) sites-years for surface soils and 13 (SMAP-L4) and 14 (NLDAS) site-years for the root zone. At unforested sites, the performance of the three remotely sensed and modelled data products was similar for surface soils (Table 1). For example, unbiased RMSD (ubRMSD), which SMAP uses as its primary performance metric [6], ranged from 0.05 to 0.06 m3 m-3 (Table 1), indicating the ability of all three products to track changes in soil moisture over time. The performance of the three products deteriorated at forested sites, however, while the difference in performance was modest for SMAP-L4 and NLDAS, the deterioration in SMAP/Sentinel performance was substantial. For instance, SMAP/Sentinel ubRMSD increased from 0.06 to 0.11 m3 m-3 and absolute mean difference (Abs MD; which includes measurement bias and spatial representativeness errors) increased from 0.06 to 0.16 m3 m-3, indicating both a reduction in ability to track temporal changes and absolute amounts of soil moisture in forest ecosystems. SMAP-L4 and NLDAS had lower unbiased RMSD for root zone (0-1 m) than surface soils at both forested and unforested sites (Tables 1 and 2; SMAP/Sentinel does not produce a root zone measurement). However, in most cases the correlation coefficient (r) was lower for the root zone than surface soils, suggesting the lower unbiased RMSD may be attributed to greater temporal stability of soil moisture in the root zone rather than improved data product performance. Mean difference and absolute mean difference, which encompass measurement bias and spatial representativeness errors, were greater for root zone than surface soils at unforested sites for both data products, but the opposite was generally true at forested sites. As with surface soils, there was relatively little change in the performance of SMAP-L4 and NLDAS between the unforested and forested sites. In summary, all three data products were able to adequately represent soil moisture at unforested sites, at least when aggregating across sites. However, while the performance of all three products deteriorated at forested sites, SMAP-L4 and NLDAS maintained sufficient performance to remain suitable for some use cases (ubRMSD <0.06 m3 m-3 and RMSD <0.13 m3 m-3). In contrast, the relatively poorer performance of the SMAP/Sentinel product at forested sites seems insufficient for most use cases (ubRMSD >0.1 m3 m-3 and RMSD >0.2 m3 m-3). We attribute the large reduction in the performance of the SMAP/Sentinel product in forests to its use of C-band wavelengths, which are particularly sensitive to vegetation interference, and apparently outweighed any gains provided by its higher spatial resolution. A combined SMAP/NISAR soil moisture product may provide improved performance relative to SMAP/Sentinel due to NISAR’s use of L-band wavelengths, which are less sensitive to vegetation (NISAR is scheduled for launch in early 2024).

Edward Ayres↗
NASA NTRS2005

Biomimetic Models for An Ecological Approach to Massively-Deployed Sensor Networks

Promises of ubiquitous control of the physical environment by massively-deployed wireless sensor networks open avenues for new applications that will redefine the way we live and work. Due to small size and low cost of sensor devices, visionaries promise systems enabled by deployment of massive numbers of sensors ubiquitous throughout our environment working in concert. Recent research has concentrated on developing techniques for performing relatively simple tasks with minimal energy expense, assuming some form of centralized control. Unfortunately, centralized control is not conducive to parallel activities and does not scale to massive size networks. Execution of simple tasks in sparse networks will not lead to the sophisticated applications predicted. We propose a new way of looking at massively-deployed sensor networks, motivated by lessons learned from the way biological ecosystems are organized. We demonstrate that in such a model, fully distributed data aggregation can be performed in a scalable fashion in massively deployed sensor networks, where motes operate on local information, making local decisions that are aggregated across the network to achieve globally-meaningful effects. We show that such architectures may be used to facilitate communication and synchronization in a fault-tolerant manner, while balancing workload and required energy expenditure throughout the network.

Jones, Kennie H.↗
NASA NTRS1998

Predicting Ecologically Important Vegetation Variables from Remotely Sensed Optical/Radar Data Using Neural Networks

A number of satellite sensor systems will collect large data sets of the Earth's surface during NASA's Earth Observing System (EOS) era. Efforts are being made to develop efficient algorithms that can incorporate a wide variety of spectral data and ancillary data in order to extract vegetation variables required for global and regional studies of ecosystem processes, biosphere-atmosphere interactions, and carbon dynamics. These variables are, for the most part, continuous (e.g. biomass, leaf area index, fraction of vegetation cover, vegetation height, vegetation age, spectral albedo, absorbed photosynthetic active radiation, photosynthetic efficiency, etc.) and estimates may be made using remotely sensed data (e.g. nadir and directional optical wavelengths, multifrequency radar backscatter) and any other readily available ancillary data (e.g., topography, sun angle, ground data, etc.). Using these types of data, neural networks can: 1) provide accurate initial models for extracting vegetation variables when an adequate amount of data is available; 2) provide a performance standard for evaluating existing physically-based models; 3) invert multivariate, physically based models; 4) in a variable selection process, identify those independent variables which best infer the vegetation variable(s) of interest; and 5) incorporate new data sources that would be difficult or impossible to use with conventional techniques. In addition, neural networks employ a more powerful and adaptive nonlinear equation form as compared to traditional linear, index transformations, and simple nonlinear analyses. These neural networks attributes are discussed in the context of the authors' investigations of extracting vegetation variables of ecological interest.

Kimes, Daniel S.↗
NASA NTRS1993

Genetic learning in rule-based and neural systems

The design of neural networks and fuzzy systems can involve complex, nonlinear, and ill-conditioned optimization problems. Often, traditional optimization schemes are inadequate or inapplicable for such tasks. Genetic Algorithms (GA's) are a class of optimization procedures whose mechanics are based on those of natural genetics. Mathematical arguments show how GAs bring substantial computational leverage to search problems, without requiring the mathematical characteristics often necessary for traditional optimization schemes (e.g., modality, continuity, availability of derivative information, etc.). GA's have proven effective in a variety of search tasks that arise in neural networks and fuzzy systems. This presentation begins by introducing the mechanism and theoretical underpinnings of GA's. GA's are then related to a class of rule-based machine learning systems called learning classifier systems (LCS's). An LCS implements a low-level production-system that uses a GA as its primary rule discovery mechanism. This presentation illustrates how, despite its rule-based framework, an LCS can be thought of as a competitive neural network. Neural network simulator code for an LCS is presented. In this context, the GA is doing more than optimizing and objective function. It is searching for an ecology of hidden nodes with limited connectivity. The GA attempts to evolve this ecology such that effective neural network performance results. The GA is particularly well adapted to this task, given its naturally-inspired basis. The LCS/neural network analogy extends itself to other, more traditional neural networks. Conclusions to the presentation discuss the implications of using GA's in ecological search problems that arise in neural and fuzzy systems.

Smith, Robert E.↗
NASA NTRS1987

Survey on large scale system control methods

The problem inherent to large scale systems such as power network, communication network and economic or ecological systems were studied. The increase in size and flexibility of future spacecraft has put those dynamical systems into the category of large scale systems, and tools specific to the class of large systems are being sought to design control systems that can guarantee more stability and better performance. Among several survey papers, reference was found to a thorough investigation on decentralized control methods. Especially helpful was the classification made of the different existing approaches to deal with large scale systems. A very similar classification is used, even though the papers surveyed are somehow different from the ones reviewed in other papers. Special attention is brought to the applicability of the existing methods to controlling large mechanical systems like large space structures. Some recent developments are added to this survey.

Mercadal, Mathieu↗
NASA NTRS1984

Relationship between forest clearing and biophysical factors in tropical environments: Implications for the design of a forest change monitoring approach

The relationship between forest clearing, biophysical factors (e.g, ecological zones, slope gradient, soils), and transportation network in Costa Rica was analyzed. The location of forested areas at four reference datas (1940, 1950, 1961, and 1977) as derived from aerial photography and LANDSAT MSS data was digitilized and entered into a geographically-referenced data base. Ecological zones as protrayed by the Holdridge Life Zone Ecology System, and the location of roads and railways were also digitized from maps of the entire country as input to the data base. Information on slope gradient and soils was digitized from maps of a 21,000 square kilometer area. The total area of forest cleared over four decades are related to biophysical factors was analyzed within the data base and deforestation rates and trends were tabulated. The relatiohship between forest clearing and ecological zone and the influence of topography, sils, and transportation network are presented and discussed.

Sader, S. A.↗
NASA NTRS2004

Ecology Based Decentralized Agent Management System

The problem of maintaining a desired number of mobile agents on a network is not trivial, especially if we want a completely decentralized solution. Decentralized control makes a system more r e bust and less susceptible to partial failures. The problem is exacerbated on wireless ad hoc networks where host mobility can result in significant changes in the network size and topology. In this paper we propose an ecology-inspired approach to the management of the number of agents. The approach associates agents with living organisms and tasks with food. Agents procreate or die based on the abundance of uncompleted tasks (food). We performed a series of experiments investigating properties of such systems and analyzed their stability under various conditions. We concluded that the ecology based metaphor can be successfully applied to the management of agent populations on wireless ad hoc networks.

Peysakhov, Maxim D.↗