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MITgcm-AD v2: Open source tangent linear and adjoint modeling framework for the oceans and atmosphere enabled by the Automatic Differentiation tool Tapenade

The Massachusetts Institute of Technology General Circulation Model (MITgcm) is widely used by the climate science community to simulate planetary atmosphere and ocean circulations. A defining feature of the MITgcm is that it has been developed to be compatible with an algorithmic differentiation (AD) tool, TAF, enabling the generation of tangent-linear and adjoint models. These provide gradient information which enables dynamics-based sensitivity and attribution studies, state and parameter estimation, and rigorous uncertainty quantification. Importantly, gradient information is essential for computing comprehensive sensitivities and performing efficient large-scale data assimilation, ensuring that observations collected from satellites and in-situ measuring instruments can be effectively used to optimize a large uncertain control space. As a result, the MITgcm forms the dynamical core of a key data assimilation product employed by the physical oceanography research community: Estimating the Circulation and Climate of the Ocean (ECCO) state estimate. Although MITgcm and ECCO are used extensively within the research community, the AD tool TAF is proprietary and hence inaccessible to a large proportion of these users. The new version 2 (MITgcm-AD v2) framework introduced here is based on the source-to-source AD tool Tapenade, which has recently been open-sourced. Another feature of Tapenade is that it stores required variables by default (instead of recomputing them) which simplifies the implementation of efficient, AD-compatible code. The framework has been integrated with the MITgcm model’s main branch and is now freely available.

Adjoints↗

Estimation and Validation of Oceanic Mass Circulation from the GRACE Mission

Since the launch of the Gravity Recovery And Climate Experiment (GRACE) in March 2002, the Earth's surface mass variations have been monitored with unprecedented accuracy and resolution. Compared to the classical spherical harmonic solutions, global high-resolution mascon solutions allows the retrieval of mass variations with higher spatial and temporal sampling (2 degrees and 10 days). We present here the validation of the GRACE global mascon solutions by comparing mass estimates to a set of about 100 ocean bottom pressure (OSP) records, and show that the forward modelling of continental hydrology prior to the inversion of the K-band range rate data allows better estimates of ocean mass variations. We also validate our GRACE results to OSP variations modelled by different state-of-the-art ocean general circulation models, including ECCO (Estimating the Circulation and Climate of the Ocean) and operational and reanalysis from the MERCATOR project.

Boy, J.-P.↗

NASA Supercomputer Improves Prospects for Ocean Climate Research

Estimates of ocean circulation constrained by in situ and remotely sensed observations have become routinely available during the past five years, and they are being applied to myriad scientific and operational problems [Stammer et al.,2002]. Under the Global Ocean Data Assimilation Experiment (GODAE), several regional and global estimates have evolved for applications in climate research, seasonal forecasting, naval operations, marine safety, fisheries,the offshore oil industry, coastal management, and other areas. This article reports on recent progress by one effort, the consortium for Estimating the Circulation and Climate of the Ocean (ECCO), toward a next-generation synthesis of ocean and sea-ice data that is global, that covers the full ocean depth, and that permits eddies.

Estimating the Circulation and Climate of the Ocea↗

Mechanisms of Interannual Variations of the Meridional Overturning Circulation of the North Atlantic Ocean

The authors investigate the nature of the interannual variability of the meridional overturning circulation (MOC) of the North Atlantic Ocean using an Estimating the Circulation and Climate of the Ocean (ECCO) assimilation product for the period of 1993-2003. The time series of the first empirical orthogonal function of the MOC is found to be correlated with the North Atlantic Oscillation (NAO) index, while the associated circulation anomalies correspond to cells extending over the full ocean depth. Model sensitivity experiments suggest that the wind is responsible for most of this interannual variability, at least south of 40(deg)N. A dynamical decomposition of the meridional streamfunction allows a further look into the mechanisms. In particular, the contributions associated with 1) the Ekman flow and its depth-independent compensation, 2) the vertical shear flow, and 3) the barotropic gyre flowing over zonally varying topography are examined. Ekman processes are found to dominate the shorter time scales (1.5-3 yr), while for longer time scales (3-10 yr) the MOC variations associated with vertical shear flow are of greater importance. The latter is primarily caused by heaving of the pycnocline in the western subtropics associated with the stronger wind forcing. Finally, how these changes in the MOC affect the meridional heat transport (MHT) is examined. It is found that overall, Ekman processes explain a larger part of interannual variability (3-10 yr) for MHT (57%) than for the MOC (33%).

meridional heat transport↗

Antarctic Circumpolar Current Transport Variability during 2003-05 from GRACE

Gravity Recovery and Climate Experiment (GRACE) gravity data spanning January 2003-November 2005 are used as proxies for ocean bottom pressure (BP) averaged over 1 month, spherical Gaussian caps 500 km in radius, and along paths bracketing the Antarctic Circumpolar Current's various fronts. The GRACE BP signals are compared with those derived from the Estimating the Circulation and Climate of the Ocean (ECCO) ocean modeling-assimilation system, and to a non-Boussinesq version of the Regional Ocean Model System (ROMS). The discrepancy found between GRACE and the models is 1.7 cm H2O (1 cm H2O approx. 1 hPa), slightly lower than the 1.9 cmH2O estimated by the authors independently from propagation of GRACE errors. The northern signals are weak and uncorrelated among basins. The southern signals are strong, with a common seasonality. The seasonal cycle GRACE data observed in the Pacific and Indian Ocean sectors of the ACC are consistent, with annual and semiannual amplitudes of 3.6 and 0.6 cmH2O (1.1 and 0.6 cm H2O with ECCO), the average over the full southern path peaks (stronger ACC) in the southern winter, on days of year 197 and 97 for the annual and semiannual components, respectively; the Atlantic Ocean annual peak is 20 days earlier. An approximate conversion factor of 3.1 Sv (Sv equiv 10(exp 6)cu m/s) of barotropic transport variability per cm H2O of BP change is estimated. Wind stress data time series from the Quick Scatterometer (QuikSCAT), averaged monthly, zonally, and over the latitude band 40(deg)- 65(deg)S, are also constructed and subsampled at the same months as with the GRACE data. The annual and semiannual harmonics of the wind stress peak on days 198 and 82, respectively. A decreasing trend over the 3 yr is observed in the three data types.

Gravity Recovery and Climate Experiment (GRACE)↗

Antarctic Circumpolar Current Transport Variability during 2003-05 from GRACE

Gravity Recovery and Climate Experiment (GRACE) gravity data spanning January 2003 - November 2005 are used as proxies for ocean bottom pressure (BP) averaged over 1 month, spherical Gaussian caps 500 km in radius, and along paths bracketing the Antarctic Circumpolar Current's various fronts. The GRACE BP signals are compared with those derived from the Estimating the Circulation and Climate of the Ocean (ECCO) ocean modeling-assimilation system, and to a non-Boussinesq version of the Regional Ocean Model System (ROMS). The discrepancy found between GRACE and the models is 1.7 cm(sub H2O) (1 cm(sub H2O) similar to 1 hPa), slightly lower than the 1.9 cm(sub H2O) estimated by the authors independently from propagation of GRACE errors. The northern signals are weak and uncorrelated among basins. The southern signals are strong, with a common seasonality. The seasonal cycle GRACE data observed in the Pacific and Indian Ocean sectors of the ACC are consistent, with annual and semiannual amplitudes of 3.6 and 0.6 cm(sub H2O) (1.1 and 0.6 cm(sub H2O) with ECCO), the average over the full southern path peaks (stronger ACC) in the southern winter, on days of year 197 and 97 for the annual and semiannual components, respectively; the Atlantic Ocean annual peak is 20 days earlier. An approximate conversion factor of 3.1 Sv ( Sv equivalent to 10(exp 6) m(exp 3) s(exp -1)) of barotropic transport variability per cm(sub H2O) of BP change is estimated. Wind stress data time series from the Quick Scatterometer (QuikSCAT), averaged monthly, zonally, and over the latitude band 40 de - 65 deg S, are also constructed and subsampled at the same months as with the GRACE data. The annual and semiannual harmonics of the wind stress peak on days 198 and 82, respectively. A decreasing trend over the 3 yr is observed in the three data types.

oceanographic regions↗

Development of the GEOS-MIT gcm Atmosphere-Ocean Model for Coupled Data Assimilation

During the last two plus decades, The Goddard Earth Observing System (GEOS) and Massachusetts Institute of Technology (MIT) modeling groups have developed, respectively, atmosphere-only and ocean-only global general circulation models. These two models (GEOS and MIT-GCM (General Circulation Model)) have demonstrated their data assimilation capabilities with the recent releases of the Modern Era Reanalysis for Research Applications, Version 2 (MERRA-2) atmospheric reanalysis and the Estimating the Circulation and Climate of the Ocean, Version 4 (ECCO-v4) ocean (and sea ice) state estimate. Independently, the two modeling groups have also produced global atmosphere-only and ocean-only simulations with km-scale grid spacing which proved invaluable for process studies and for the development of satellite and in-situ sampling strategies. Recently, a new effort has been made to couple these two models and to leverage their data-assimilation and high resolution capabilities (i.e., eddy-permitting ocean, cloud-permitting atmosphere). The focus in the model development is put on sub-seasonal to decadal time scales. In this talk, I discuss the new coupled model and present some first coupled simulation results. This will include a high-resolution coupled GEOS-MIT simulation, whereby we have coupled a cubed-sphere-720 (approximately 1/8 degrees) configuration of the GEOS atmosphere to a latitude-longitude-cap-1080 (approximately 1/12 degrees) configuration of the MIT ocean. We compare near-surface diagnostics of this fully coupled ocean-atmosphere set-up to equivalent atmosphere-only and ocean-only simulations. In the comparisons we focus in particular on the differences in air-sea interactions between sea surface temperature (SST) and wind for the coupled and uncoupled simulations.

Strobach, Ehud↗

The Development of the New GEOS-MITgcm Atmosphere-Ocean Model for Coupled Data Assimilation System

During the last two plus decades, The Goddard Earth Observing System (GEOS) and Massachusetts Institute of Technology (MIT) modeling groups have developed, respectively, atmosphere-only and ocean-only global general circulation models. These two models (GEOS and MITgcm) have demonstrated their data assimilation capabilities with the recent releases of the Modern Era Reanalysis for Research Applications, Version 2 (MERRA-2) atmospheric reanalysis and the Estimating the Circulation and Climate of the Ocean, Version 4 (ECCO-v4) ocean (and sea ice) state estimate. Independently, the two modeling groups have also produced global atmosphere-only and ocean-only simulations with km-scale grid spacing which proved invaluable for process studies and for the development of satellite and in-situ sampling strategies.Recently, a new effort has been made to couple these two models and to leverage their data-assimilation and high resolution capabilities (i.e., eddy-permitting ocean, cloud-permitting atmosphere). The focus in the model development is put on sub-seasonal to decadal time scales. In this talk, I discuss the new coupled model and present some first coupled simulation results. This will include a high-resolution coupled GEOS-MIT simulation, whereby we have coupled a cubed-sphere-720 (~ 1/8 deg) configuration of the GEOS atmosphere to a lat-lon-cap-1080 (~ 1/12 deg) configuration of the MIT ocean. We compare near-surface diagnostics of this fully coupled ocean-atmosphere set-up to equivalent atmosphere-only and ocean-only simulations. In the comparisons we focus in particular on the differences in air-sea interactions between sea surface temperature (SST) and wind for the coupled and uncoupled simulations.

Strobach, Ehud↗

A New Atmosphere-Ocean Model for Studying Air-Sea Interactions and Coupled Data Assimilation

During the last two plus decades, The Goddard Earth Observing System (GEOS) and Massachusetts Institute of Technology (MIT) modeling groups have developed, respectively, atmosphere-only and ocean-only global general circulation models. These two models (GEOS and MITgcm) have demonstrated their data assimilation capabilities with the recent releases of the Modern Era Reanalysis for Research Applications, Version 2 (MERRA-2) atmospheric reanalysis and the Estimating the Circulation and Climate of the Ocean, Version 4 (ECCO-v4) ocean (and sea ice) state estimate. Independently, the two modeling groups have also produced global atmosphere-only and ocean-only simulations with km-scale grid spacing which proved invaluable for process studies and for the development of satellite and in-situ sampling strategies.Recently, a new effort has been made to couple these two models and to leverage their data-assimilation and high resolution capabilities (i.e., eddy-permitting ocean, cloud-permitting atmosphere). The focus in the model development is put on sub-seasonal to decadal time scales. In this talk, I discuss the new coupled model and present some first coupled simulation results. This will include a high-resolution coupled GEOS-MIT simulation, whereby we have coupled a cubed-sphere-720 (~ 1/8°) configuration of the GEOS atmosphere to a lat-lon-cap-1080 (~ 1/12°) configuration of the MIT ocean. We compare near-surface diagnostics of this fully coupled ocean-atmosphere set-up to equivalent atmosphere-only and ocean-only simulations. In the comparisons we focus in particular on the differences in air-sea interactions between sea surface temperature (SST) and wind for the coupled and uncoupled simulations.

Strobach, Ehud↗

The Development of the New GEOS-MITgcm Atmosphere-Ocean Model for Coupled Data Assimilation System

During the last two plus decades, The Goddard Earth Observing System (GEOS) and Massachusetts Institute of Technology (MIT) modeling groups have developed, respectively, atmosphere-only and ocean-only global general circulation models. These two models (GEOS and MITgcm) have demonstrated their data assimilation capabilities with the recent releases of the Modern Era Reanalysis for Research Applications, Version 2 (MERRA-2) atmospheric reanalysis and the Estimating the Circulation and Climate of the Ocean, Version 4 (ECCO-v4) ocean (and sea ice) state estimate. Independently, the two modeling groups have also produced global atmosphere-only and ocean-only simulations with km-scale grid spacing which proved invaluable for process studies and for the development of satellite and in-situ sampling strategies.Recently, a new effort has been made to couple these two models and to leverage their data-assimilation and high resolution capabilities (i.e., eddy-permitting ocean, cloud-permitting atmosphere). The focus in the model development is put on sub-seasonal to decadal time scales. In this talk, I discuss the new coupled model and present some first coupled simulation results. This will include a high-resolution coupled GEOS-MIT simulation, whereby we have coupled a cubed-sphere-720 (~ 1/8°) configuration of the GEOS atmosphere to a lat-lon-cap-1080 (~ 1/12°) configuration of the MIT ocean. We compare near-surface diagnostics of this fully coupled ocean-atmosphere set-up to equivalent atmosphere-only and ocean-only simulations. In the comparisons we focus in particular on the differences in air-sea interactions between sea surface temperature (SST) and wind for the coupled and uncoupled simulations.

Strobach, Ehud↗

Performance Analysis of Scientific and Engineering Applications Using MPInside and TAU

In this paper, we present performance analysis of two NASA applications using performance tools like Tuning and Analysis Utilities (TAU) and SGI MPInside. MITgcmUV and OVERFLOW are two production-quality applications used extensively by scientists and engineers at NASA. MITgcmUV is a global ocean simulation model, developed by the Estimating the Circulation and Climate of the Ocean (ECCO) Consortium, for solving the fluid equations of motion using the hydrostatic approximation. OVERFLOW is a general-purpose Navier-Stokes solver for computational fluid dynamics (CFD) problems. Using these tools, we analyze the MPI functions (MPI_Sendrecv, MPI_Bcast, MPI_Reduce, MPI_Allreduce, MPI_Barrier, etc.) with respect to message size of each rank, time consumed by each function, and how ranks communicate. MPI communication is further analyzed by studying the performance of MPI functions used in these two applications as a function of message size and number of cores. Finally, we present the compute time, communication time, and I/O time as a function of the number of cores.

Saini, Subhash↗

Ocean Circulation and Biogeochemistry

Dr. Whitt will give an oral presentation on his work on the impact of the ocean’s meridional overturning circulation on North Atlantic Ocean biogeochemical tracer budgets, including nutrients and carbon. The results are derived from two versions of the Estimating the Circulation and Climate of the Ocean (ECCO) model, including the latest release V4r5 (at 1 degree resolution) and the actively developed LLC270 (at 1/3 degree resolution).

MOC↗

Emerging Capabilities Toward Decadal Prediction - NASA

NASA's interest and role in decadal prediction is described, along with the current capabilities and experience in prediction across weather to climate time scales. These activities span different NASA centers. In addition, plans for conducting decadal prediction at GMAO (Global Modeling and Assimilation Office) are presented, including an expansion of the present seasonal prediction system and the use of the newly developed Goddard Earth Observing System-Estimating the Circulation and Climate of the Ocean (GEOS-ECCO) system.

GEOS↗

Consequences of Different Air-Sea Feedbacks on Ocean Using MITgcm and MERRA-2 Forcing: Implications for Coupled Data Assimilation Systems

Ocean surface flux estimates from atmospheric and oceanic reanalyses contain errors that compensate for inaccuracies in the respective atmosphere and ocean models used to generate these reanalyses. A conundrum for climate studies is the discrepancy between surface fluxes that minimize model-data differences for an atmosphere-only model vs surface fluxes that minimize model-data differences for an ocean model. As a first step towards a consistent coupled ocean-atmosphere data-assimilation (DA) system, we compare surface net heat flux from a state-of-the-art atmospheric reanalysis, the Modern-Era Retrospective analysis for Research and Applications, Version 2 (MERRA-2), to net heat flux from a state-of-the-art ocean state estimate, the Estimating the Circulation and Climate of the Ocean Version 4 (ECCO-v4). The possible impacts of the MERRA-2 and ECCO-v4 air-sea net heat flux difference in a coupled DA system were assessed using a set of experiments designed to imitate different “flavors” of a coupled DA system in an ocean-only setup. This was done by forcing the ECCO-v4 underlying ocean model - the Massachusetts Institute of Technology general circulation model (MITgcm) - with different sets of MERRA-2 fields and utilizing different forcing methods. By doing so we were able to turn off different air-sea feedbacks which, in a coupled DA setup, are partially muted by the constraining observations. The set of experiments, therefore, represents a range of active feedbacks in different “flavors” of coupled data-assimilation systems. For the period 1992–2011, MERRA-2 net heat flux has a global mean difference of -4.9 Wm(exp -2) relative to ECCO-v4. When MERRA-2 surface fields are used to force MITgcm, imbalances in the energy and the hydrological cycles of MERRA-2, which are directly related to the fact that MERRA-2 was created without an interactive ocean, propagate to the ocean. The experiment in which MITgcm is forced with MERRA-2 fluxes (MERRA-2-flux experiment) results in a 2.5°C global mean Sea Surface Temperature (SST) cooling, a 1m reduction in global mean sea level, and other drastic changes in the large scale ocean circulation relative to those resulting when the MITgcm is forced with the optimized ECCO-v4 net heat flux (the ECCO-v4 experiment itself). When MITgcm is forced with MERRA-2 state variables (MERRA-2-state experiment), the SST is somewhat restored to the observed SST, but the errors are shifted to the water cycle, resulting in a global mean sea level increase of 2.7 m. To further explore the pros and cons of these two approaches, we introduce a new intermediate forcing method in which the ocean is forced with turbulent fluxes but has a long wave feedback. This method, unlike MERRA-2 state, preserves the MERRA-2 water and salinity cycles, and it reduces the SST error compared to the MERRA-2-flux experiment, but the SST is not as good as that in the MERRA-2-state experiment. Our results have implications for ocean-model forcing recipes and clearly reveal the undesirable consequences of limiting the feedbacks in either these types of experiments or in coupled DA.

Ehud Strobach↗

Comparison of MERRA-2 and ECCO-V4 Ocean Surface Heat Fluxes: Consequences of Different Forcing Feedbacks on Ocean Circulation and Implications for Climate Data Assimilation

Forcing ocean models with reanalysis data is a common practice in ocean modeling. As part of this practice, prescribed atmospheric state variables and interactive ocean SST (Sea Surface Temperature) are used to calculate fluxes between the ocean and the atmosphere. When forcing an ocean model with reanalysis fields, errors in the reanalysis data, errors in the ocean model and errors in the forcing formulation will generate a different solution compared to other ocean reanalysis solutions (which also have their own errors). As a first step towards a consistent coupled ocean-atmosphere reanalysis, we compare surface heat fluxes from a state-of-the-art atmospheric reanalysis, the Modern-Era Retrospective analysis for Research and Applications, Version 2 (MERRA-2), to heat fluxes from a state-of-the-art oceanic reanalysis, the Estimating the Circulation and Climate of the Ocean Version 4, Release 2 (ECCO-v4). Then, we investigate the errors associated with the MITgcm (Massachusetts Institute of Technology general circulation model) ocean model in its ECCO-v4 ocean reanalysis configuration (1992-2011) when it is forced with MERRA- 2 atmospheric reanalysis fields instead of with the ECCO-v4 adjoint optimized ERA-interim state variables. This is done by forcing ECCO-v4 ocean with and without feedbacks from MERRA-2 related to turbulent fluxes of heat and moisture and the outgoing long wave radiation. In addition, we introduce an intermediate forcing method that includes only the feedback from the interactive outgoing long wave radiation. The resulting ocean circulation is compared with ECCO-v4 reanalysis and in-situ observations. We show that, without feedbacks, imbalances in the energy and the hydrological cycles of MERRA-2 (which are directly related to the fact it was created without interactive ocean) result in considerable SST drifts and a large reduction in sea level. The bulk formulae and interactive outgoing long wave radiation, although providing air-sea feedbacks and reducing model-data misfit, strongly relax the ocean to observed SST and may result in unwanted features such as large change in the water budget. These features have implications in a desired forcing recipe to be used. The results strongly and unambiguously argue for next generation data assimilation climate studies to involve fully coupled systems.

MERRA-2↗

What is data assimilation really solving, and how is the calculation actually done?

Data assimilation is a procedure in which observations are combined with models. The observations correct model errors on the one hand, and the models extrapolate the data information in space, time, and among different properties on the other. The result of assimilation is generally a more complete and more accurate description of the state of the modeled system than those obtained by either observations or model simulations alone. However, data assimilation is not a panacea for correcting every model error or for compensating all deficiencies of observations.

smoother↗