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Mechanistic insights to drive catalytic hydrogenation of formamide intermediates to methanol via deaminative hydrogenation
Amine-promoted hydrogenation of CO 2 to methanol typically proceeds via a formamide intermediate when amines are used as additives or if the hydrogenation is performed in carbon capture solvents. The catalysts used for the hydrogenation of the formamide intermediate dictate the selectivity of the products formed: 1) Deoxygenative hydrogenation (C–O bond cleavage) resulting in N-methylation of amine and deactivation of the solvent, 2) Deaminative hydrogenation (C–N bond cleavage) resulting in formation of methanol and regeneration of the solvent. To date, catalytic reductions of CO 2 with amine promoters suffer from poor selectively for methanol which we attribute to the limiting formamide intermediate, though to date, the conditions that favor C–N cleavage have yet to be fully understood. To better understand the reactivity of the formamide intermediates, a range of heterogenous catalysts were used to study the hydrogenation of formamide. Well-known gas phase CO 2 hydrogenation catalysts catalyze the hydrogenation of formamide to N-methyl product via C–O bond cleavage. However, the selectivity can be readily shifted to selective C–N bond cleavage by addition of an additive with sufficient basicity for both homogenous and heterogeneous catalytic systems. The base additive shifts the selectivity by deprotonating a hemiaminal intermediate formed in situ during the formamide hydrogenation. This prevents dehydration process leading to N-methylated product, which is a key capture solvent deactivation pathway that hinders amine use in carbon capture, utilization, and storage (CCUS). The findings from this study provide a roadmap on how to improve the selectivity of known heterogenous catalysts, enabling catalytic reduction of captured CO 2 to methanol.
Triggering C-N Coupling on Metal Oxide Nanocomposite for the Electrochemical Reduction of CO 2 and NO x ⁻ to Formamide
The co-electroreduction of CO 2 and NO x ⁻ (NO 3 ⁻ /NO 2 ⁻ ) to generate formamide (HCONH 2 ) offers an opportunity for downstream chemical and polymer manufacturing decarbonization; however, significant challenges lie in the C-N coupling and the associated low product selectivity. Herein, p-block metal oxides are incorporated in copper oxides to provide more accessible active sites for reactant adsorption and activation, tuning the reaction selectivity toward the formamide production. Through in situ Raman and synchrotron-based infrared spectroscopy measurements, C-N bond formation is demonstrated in real-time with the CuO x /BiO x catalyst, where the C-N bond is detected via a *CHO and *NH 2 intermediates formation, in agreement with the density functional theory calculations. When tested in a flow electrolyzer, a formamide yield rate of 134 ± 11 mmol h -1 g cat -1 is reported, the first report of co-electroreduction of CO 2 and NO x ⁻ to formamide beyond conventional H-cell measurements. These new insights on the C-N coupling mechanisms and scale-up capability provide directions for further development of electrocatalysts for the formamide production.
Dynamics of HCN, HNC, and HNCO Formation in the 193 nm Photodissociation of Formamide
Formamide (NH 2 CHO) is the simplest molecule containing a peptide linkage [-NH-C($=$O)-], and it plays an essential role in the study of prebiotic chemistry. Exposure to UV irradiation allows formamide to decompose and act as a prebiotic feedstock in the formation of nucleobases and other necessary starting materials. The photodissociation mechanism of gaseous formamide at 193 nm is studied using (a) chirped-pulse Fourier transform millimeter-wave spectroscopy in the 260-290 GHz spectral region in a room-temperature flow-tube reactor at 1 mu bar pressure, (b) a combination of electronic structure theory, transition state theory, and quasiclassical trajectories, and (c) the Active Thermochemical Tables. The HCN and HNC photoproducts of hydrogenated (NH 2 CHO) and deuterated (NH 2 CDO and ND 2 CHO) formamide precursors are examined to gain insight into the photodissociation mechanism. Here, the theoretical investigation has characterized the main pathway leading to each of the HCN/HNC isomers from the precursor isotopologues. The theoretical branching ratio [HNC]/[HCN] = 2.1 for nascent photofragments agrees with the experiment. The effect of the postphotolysis HNC ↔ HCN isomerization on the [HNC]/[HCN] ratio is predicted. We report the experimental branching ratio [HNCO]: ([HNC] + [HCN]) = 12 ± 3 and propose that most of HNCO originates from dissociation on the S-1 electronic state of formamide.
Synthesis of formamide and related organic species in the interstellar medium via chemical dynamics simulations
We show, by means of direct dynamics simulations, how it is possible to define possible reactants and mechanisms leading to the formation of formamide in the interstellar medium. In particular, different ion–molecule reactions in the gas phase were considered: NH{sub 3}OH{sup +}, NH{sub 2}OH{sub 2}{sup +}, H{sub 2}COH{sup +}, and NH{sub 4} {sup +} for the ions and NH{sub 2}OH, H{sub 2}CO, and NH{sub 3} for the partner neutrals. These calculations were combined with high level ab initio calculations to investigate possible further evolution of the products observed. In particular, for formamide, we propose that the NH{sub 2}OH{sub 2}{sup +} + H{sub 2}CO reaction can produce an isomer, NH{sub 2}OCH{sub 2}{sup +}, that, after dissociative recombination, can produce neutral formamide, which was observed in space. The direct dynamics do not pre-impose any reaction pathways and in other reactions, we did not observe the formation of formamide or any possible precursor. On the other hand, we obtained other interesting reactions, like the formation of NH{sub 2}CH{sub 2}{sup +}. Finally, some radiative association processes are proposed. All of the results obtained are discussed in light of the species observed in radioastronomy.
Electron ionization of clusters containing the formamide molecule
Abstract Studies on electron interactions with formamide (FA) clusters promote scientific interest as a model system to understand phenomena relevant to astrophysical, prebiotic, and radiobiological processes. In this work, mass spectrometric detection of cationic species for both small bare and microhydrated formamide clusters was performed at an electron ionization of 70 eV. Furthermore, a comparative analysis of the cluster spectra with the literature-reported gas-phase spectra is presented and discussed, revealing different reaction channels affected by the cluster environment. This study is essential in developing our understanding of both low-energy electron phenomena in clusters that can bridge the complexity gap between gas and realistic systems and the effect of hydration on electron-induced processes.
High intensity x-ray interaction with a model bio-molecule system: double-core-hole states and fragmentation of formamide
Formamide, a simple model bio-molecule (HCONH 2 ), is irradiated with high intensity, ultrashort pulses from an x-ray free electron laser. Ionic fragments resulting from photoionization and subsequent decay processes are recorded, as well as the electronic signature of the different inner shell ionization events that can take place during the x-ray pulses. Additionally, the formation of double-core-hole states, where a second inner shell electron is removed before the first core hole has been refilled is observed in the electron spectra, recorded at all three sites (C, N, O) of the molecule. The individual ionization potentials are compared with results of ab initio calculations at different level of theory. Based on our results, future opportunities for advanced studies of inner-shell-induced electronic and nuclear dynamics are explored.
Investigating resonant low-energy electron attachment to formamide: Dynamics of model peptide bond dissociation and other fragmentation channels
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Organic Modulators Enable Morphological Diversity in Colloidal Crystals Engineered with DNA
Colloidal crystal engineering with DNA is a powerful way of generating a wide variety of crystals spanning over 90 different symmetries. However, in many cases, crystals with well-defined habits are difficult, if not impossible, to make, in part due to rapid crystal defect formation and propagation. This is especially true in the case of face-centered cubic (FCC) structures. Herein, we report a strategy that uses formamide as a chemical modulator to slow down colloidal crystal growth, which decreases defect formation and yields higher-quality crystals. Formamide forms hydrogen bonds with DNA bases and destabilizes the DNA duplex; in the context of colloidal crystallization, formamide leads to the disassembly of undercoordinated particles (defect architectures) and facilitates their reassembly into structures with the maximum number of nearest-neighbor contacts and DNA bonds. Here, when targeting an FCC lattice comprised of DNA-modified spherical 20 nm particles, formamide promotes the formation of its Wulff polyhedron (a truncated octahedron), never observed before in colloidal crystal engineering with DNA. Importantly, kinetic habits, including tetrahedra, octahedra, icosahedra, and decahedra, are also observed depending on formamide concentration.
Two-dimensional vibrational-electronic spectroscopy
Two-dimensional vibrational-electronic (2D VE) spectroscopy is a femtosecond Fourier transform (FT) third-order nonlinear technique that creates a link between existing 2D FT spectroscopies in the vibrational and electronic regions of the spectrum. 2D VE spectroscopy enables a direct measurement of infrared (IR) and electronic dipole moment cross terms by utilizing mid-IR pump and optical probe fields that are resonant with vibrational and electronic transitions, respectively, in a sample of interest. We detail this newly developed 2D VE spectroscopy experiment and outline the information contained in a 2D VE spectrum. We then use this technique and its single-pump counterpart (1D VE) to probe the vibrational-electronic couplings between high frequency cyanide stretching vibrations (ν{sub CN}) and either a ligand-to-metal charge transfer transition ([Fe{sup III}(CN){sub 6}]{sup 3−} dissolved in formamide) or a metal-to-metal charge transfer (MMCT) transition ([(CN){sub 5}Fe{sup II}CNRu{sup III}(NH{sub 3}){sub 5}]{sup −} dissolved in formamide). The 2D VE spectra of both molecules reveal peaks resulting from coupled high- and low-frequency vibrational modes to the charge transfer transition. The time-evolving amplitudes and positions of the peaks in the 2D VE spectra report on coherent and incoherent vibrational energy transfer dynamics among the coupled vibrational modes and the charge transfer transition. The selectivity of 2D VE spectroscopy to vibronic processes is evidenced from the selective coupling of specific ν{sub CN} modes to the MMCT transition in the mixed valence complex. The lineshapes in 2D VE spectra report on the correlation of the frequency fluctuations between the coupled vibrational and electronic frequencies in the mixed valence complex which has a time scale of 1 ps. The details and results of this study confirm the versatility of 2D VE spectroscopy and its applicability to probe how vibrations modulate charge and energy transfer in a wide range of complex molecular, material, and biological systems.
ON THE FORMATION OF AMIDE POLYMERS VIA CARBONYL–AMINO GROUP LINKAGES IN ENERGETICALLY PROCESSED ICES OF ASTROPHYSICAL RELEVANCE
We report on the formation of organic amide polymers via carbonyl–amino group linkages in carbon monoxide and ammonia bearing energetically processed ices of astrophysical relevance. The first group comprises molecules with one carboxyl group and an increasing number of amine moieties starting with formamide (45 u), urea (60 u), and hydrazine carboxamide (75 u). The second group consists of species with two carboxyl (58 u) and up to three amine groups (73 u, 88 u, and 103 u). The formation and polymerization of these linkages from simple inorganic molecules via formamide und urea toward amide polymers is discussed in an astrophysical and astrobiological context. Our results show that long chain molecules, which are closely related to polypeptides, easily form by energetically processing simple, inorganic ices at very low temperatures and can be released into the gas phase by sublimation of the ices in star-forming regions. Our experimental results were obtained by employing reflectron time-of-flight mass spectroscopy, coupled with soft, single photon vacuum ultraviolet photoionization; they are complemented by theoretical calculations.
Solvothermal synthesis of porous organic cage CC3 in the presence of dimethylformamide as solvent
Morphology, and crystal product of porous organic cage CC3, was modified by the use of a novel and non-traditional high dielectric constant solvent dimethyl formamide.
Investigating vibrational relaxation in cyanide-bridged transition metal mixed-valence complexes using two-dimensional infrared and infrared pump-probe spectroscopies
Using polarization-selective two-dimensional infrared (2D IR) and infrared pumpprobe spectroscopies, we study vibrational relaxation of the four cyanide stretching (CN) vibrations found in [(NH3)5RuIIINCFeII(CN)5] (FeRu) dissolved in D2O or formamide and [(NC)5FeIICNPtIV(NH3)4NCFeII(CN)5] 4 (FePtFe) dissolved in D2O. These cyanide-bridged transition metal complexes serve as models for understanding the role high frequency vibrational modes play in metal-to-metal charge transfers over a bridging ligand. However, there is currently little information about vibrational relaxation and dephasing dynamics of the anharmonically coupled CN modes in the electronic ground state of these complexes. IR pump-probe experiments reveal that the vibrational lifetimes of the CN modes are 2 times faster when FeRu is dissolved in D2O versus formamide. They also reveal that the vibrational lifetimes of the CN modes of FePtFe in D2O are almost four times as long as for FeRu in D2O. Combined with mode-specific relaxation dynamics measured from the 2D IR experiments, the IR pump-probe experiments also reveal that intramolecular vibrational relaxation is occurring in all three systems on 1 ps timescale. Center line slope dynamics, which have been shown to be a measure of the frequency-frequency correlation function, reveal that the radial, axial, and trans CN modes exhibit a 3 ps timescale for frequency fluctuations. This timescale is attributed to the forming and breaking of hydrogen bonds between each mode and the solvent. The results presented here along with our previous work on FeRu and FePtFe reveal a picture of coupled anharmonic CN modes where the spectral diffusion and vibrational relaxation dynamics depend on the spatial localization of the mode on the molecular complex and its specific interaction with the solvent.
Fungicidal Properties of 2-Amino-4-nitrophenol and Its Derivatives
Fungicidal effect of 2-amino-4-nitrophenol and its derivates, prepared by replacing the hydrogen atom in its amino group by different organic radicals was studied. Evaluation of the biological activity of studied substances by сomputational chemistry methods was performed. Toxicity of 2-amino-4-nitrophenol and synthesized N-(2-hydroxy-5-nitrophenyl)formamide and N-(2-hydroxy-5-nitrophenyl)acetamide to six species of phytophatogen fungi were tested in the experiment. The results of the study demonstrate that replacement of the hydrogen atom in the amino group by a aldehyde group leads to an increase in fungicidal activity with respect to Rhizoctonia solani and Bipolaris sorokiniana. A replacement of the hydrogen atom by a ketone group increases the inhibitory effect on Sclerotinia sclerotiorum and Venturia inaequalis. The paper contains comparative data on the fungicide effect of commercial preparation for studied fungi also.
Non-aqueous metathesis as a general approach to prepare nanodispersed materials: Case study of scheelites
A general approach to the preparation of inorganic nanoparticles is proposed, using metathesis of precursor salts in non-aqueous liquids. Nanoparticles of scheelites AMO{sub 4} (A=Ba, Sr, Ca; M=Mo, W), were obtained with a quantitative yield. Precipitations in formamide, N-methylformamide, propylene carbonate, DMSO and polyols often provide narrow particle size distributions. Advantageous morphology was explained by strong ionic association in non-aqueous solvents, leading to slow nucleation and negligible Ostwald ripening. Mean particle size below 10 nm and high specific surface areas were obtained for several Ca(Sr)Mo(W)O{sub 4} materials, making them promising for applications as adsorbents or catalysts. Zeta-potential of scheelites in aqueous suspensions showed negative values in a wide range of pH. Systematic study of optical properties demonstrated variation of optical gap in the sequences W>Mo and Ba>Sr>Ca. The observed trends were reproduced by DFT calculations. No quantum confinement effect was observed for small particles, though the surface states induce low-energy features in the optical spectra. - Graphical abstract: Scheelites AMO{sub 4} (A=Ca, Sr, Ba; M=Mo, W) were prepared in various non-aqueous liquids with high specific surface areas and narrow size distributions. The optical gap of scheelites changes in the series Ca<Sr<Ba and Mo<W. - Highlights: • Scheelites AMO{sub 4} (A=Ca, Sr, Ba; M=Mo, W) were prepared in various non-aqueous liquids. • Narrow size distributions explained by ionic association in non-aqueous media. • Nanoparticles of less than 10 nm size and highest ever specific surface areas were obtained. • Optical gap of scheelites changes in the series Ca<Sr<Ba and Mo <W.
Solvent induced synthesis, structure and properties of coordination polymers based on 5-hydroxyisophthalic acid as linker and 1,10-phenanthroline as auxiliary ligand
Three new coordination polymers [Mn(hip)(phen) (H{sub 2}O)]{sub n} (1), [Co(hip)(phen) (H{sub 2}O)]{sub n} (2), and [Cd(hip) (phen) (H{sub 2}O)]{sub n} (3) (H{sub 2}hip=5-hydroxyisophthalic acid; phen=1,10-phenanthroline) have been synthesized by solvo-hydrothermal method using diethyl formamide-water (DEF-H{sub 2}O) as solvent system. Single-crystal X-ray diffraction analysis reveals that all three coordination polymers 1, 2 and 3 crystallize in monoclinic space group P2/n. Metal ions are inter-connected by hydroxyisophthalate anions forming zig-zag 1D chain. 1D chains are further inter-connected by hydrogen bonding and π–π stacking interactions leading to 3D supramolecular architecture. Hydrogen-bonding and π–π stacking provide thermal stability to polymers. Compounds 1 and 2 are paramagnetic at room temperature and variable temperature magnetic moment measurements revealed weak ferromagnetic interactions between metal ions at low temperature. Compound 3 exhibits excellent photoluminescence with large Stokes shift. - Graphical abstract: 1D helical chains of coordination polymers were synthesized by solvo-hydrothermal reaction of 5-hydroxyisopthalic acid and 1,10-phenanthroline with MnCl{sub 2}·4H{sub 2}O / CoCl{sub 2}·6H{sub 2}O / Cd(NO{sub 3}){sub 2}·6H{sub 2}O. - Highlights: • Solvent induced synthesis of three coordination polymers with 1D zig-zag structure. • Crystal structures of coordination polymers are reported and discussed. • 1,10-Phenanthroline influences magnetic and luminescent properties of polymers. • Coordination polymer of Cd is luminescent exhibiting large Stokes shift.
Elastic and total cross sections for simple biomolecules in the intermediate energy range
The elastic and total cross sections for formaldehyde, acetaldehyde, acetone, 2-butanone and formamide are calculated using the spherical complex optical potential formalism in the intermediate energy range from 50 eV to 10 keV. These cross sections find application to various fields like radiation damage and biological sciences. The present results are compared with the available experimental and theoretical data and are found to give excellent agreement. The elastic cross sections reported for most of the targets in the present energy range are done for the first time. The energy dependence of the contribution of ionization and elastic cross section with respect to the total cross section and the correlation of total cross section with polarizability of the molecules are also studied.