Molecular basis for Ras suppressor-1 binding to PINCH-1 in focal adhesion assembly
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Fukuda, Koichi↗
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Single-shot, phase-diversity phase retrieval for high-energy beam focal-spot diagnostics
A single-shot, phase-diversity phase-retrieval method is demonstrated for directly characterizing the on-target focal spot at kilojoule energy in the OMEGA 60-beam laser. A 2D holographic grating that introduces diversity focal spots is installed in an existing on-target focal-spot diagnostic to obtain a single-shot diversity focal-spot image. A nonlinear optimization phase-retrieval algorithm with four diversity focal spots is employed to determine modal coefficients for the incident wavefront. The agreement between the measured and calculated focal spots is excellent. Furthermore, this approach can be easily adapted for other high-energy focal-spot diagnostics.
47 OTHER INSTRUMENTATION↗
Approximating large-basis coupled-cluster theory vibrational frequencies using focal-point approximations
The focal-point approximation can be used to estimate a high-accuracy, slow quantum chemistry computation by combining several lower-accuracy, faster computations. We examine the performance of focal-point methods by combining second-order Møller–Plesset perturbation theory (MP2) with coupled-cluster singles, doubles, and perturbative triples [CCSD(T)] for the calculation of harmonic frequencies and that of fundamental frequencies using second-order vibrational perturbation theory (VPT2). In contrast to standard CCSD(T), the focal-point CCSD(T) method approaches the complete basis set (CBS) limit with only triple-ζ basis sets for the coupled-cluster portion of the computation. The predicted harmonic and fundamental frequencies were compared with the experimental values for a set of 20 molecules containing up to six atoms. Here, the focal-point method combining CCSD(T)/aug-cc-pV(T + d)Z with CBS-extrapolated MP2 has mean absolute errors vs experiment of only 7.3 cm −1 for the fundamental frequencies, which are essentially the same as the mean absolute error for CCSD(T) extrapolated to the CBS limit using the aug-cc-pV(Q + d)Z and aug-cc-pV(5 + d)Z basis sets. However, for H 2 O, the focal-point procedure requires only 3% of the computation time as the extrapolated CCSD(T) result, and the cost savings will grow for larger molecules.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
High-speed Focal Plane Wave Front Sensing with an Optical Chopper
Focal plane wave front sensing and control is a critical approach to reducing noncommon path errors between a conventional astronomical adaptive optics (AO) wave front sensor (WFS) detector and a science camera. However, in addition to mitigating noncommon path errors, recent focal plane wave front sensing techniques have been developed to operate at speeds fast enough to enable "multi-WFS" AO, where residual atmospheric errors are further corrected by a focal plane WFS. Although a number of such techniques have been recently developed for coronagraphic imaging, here we present one designed for noncoronagraphic imaging. Utilizing conventional AO system components, this concept additionally requires (1) a detector imaging the focal plane of the WFS light source and (2) a pupil plane optical chopper device that is the noncommon path to the first WFS and is synchronized to the focal plane imager readout. These minimal hardware requirements enable the temporal amplitude modulation to resolve the sine ambiguity of even wave-front modes for low, mid, and high wave front spatial frequencies. Similar capabilities have been demonstrated with classical phase diversity by defocusing the detector, but such techniques are incompatible with simultaneous science observations. This optical chopping technique, however, enables science imaging at up to 50% duty cycle. In conclusion, we present both simulations and laboratory validation of this concept on SEAL, the Santa Cruz Extreme AO Laboratory testbed.
79 ASTRONOMY AND ASTROPHYSICS↗
Inferring the Focal Depths of Small Earthquakes in Southern California Using Physics-Based Waveform Features
Determining the depths of small crustal earthquakes is challenging in many regions of the world, because most seismic networks are too sparse to resolve trade-offs between depth and origin time with conventional arrival-time methods. Precise and accurate depth estimation is important, because it can help seismologists discriminate between earthquakes and explosions, which is relevant to monitoring nuclear test ban treaties and producing earthquake catalogs that are uncontaminated by mining blasts. Here, we examine the depth sensitivity of several physics-based waveform features for ~8000 earthquakes in southern California that have well-resolved depths from arrival-time inversion. We focus on small earthquakes (2 < M L < 4) recorded at local distances (<150 km), for which depth estimation is especially challenging. We find that differential magnitudes (M w /M L –M c ) are positively correlated with focal depth, implying that coda wave excitation decreases with focal depth. We analyze a simple proxy for relative frequency content, Φ≡log 10 (M 0 )+3log 10 (f c ), and find that source spectra are preferentially enriched in high frequencies, or “blue-shifted,” as focal depth increases. Here, we also find that two spectral amplitude ratios Rg 0.5–2 Hz/Sg 0.5–8 Hz and Pg/Sg at 3–8 Hz decrease as focal depth increases. Using multilinear regression with these features as predictor variables, we develop models that can explain 11%–59% of the variance in depths within 10 subregions and 25% of the depth variance across southern California as a whole. We suggest that incorporating these features into a machine learning workflow could help resolve focal depths in regions that are poorly instrumented and lack large databases of well-located events. Some of the waveform features we evaluate in this study have previously been used as source discriminants, and our results imply that their effectiveness in discrimination is partially because explosions generally occur at shallower depths than earthquakes.
58 GEOSCIENCES↗
A positive feedback loop involving the Spa2 SHD domain contributes to focal polarization
Focal polarization is necessary for finely arranged cell-cell interactions. The yeast mating projection, with its punctate polarisome, is a good model system for this process. We explored the critical role of the polarisome scaffold protein Spa2 during yeast mating with a hypothesis motivated by mathematical modeling and tested by in vivo experiments. Our simulations predicted that two positive feedback loops generate focal polarization, including a novel feedback pathway involving the N-terminal domain of Spa2. We characterized the latter using loss-of-function and gain-of-function mutants. The N-terminal region contains a Spa2 Homology Domain (SHD) which is conserved from yeast to humans, and when mutated largely reproduced the spa2Δ phenotype. Our work together with published data show that the SHD domain recruits Msb3/4 that stimulates Sec4-mediated transport of Bud6 to the polarisome. There, Bud6 activates Bni1-catalyzed actin cable formation, recruiting more Spa2 and completing the positive feedback loop. We demonstrate that disrupting this loop at any point results in morphological defects. Gain-of-function perturbations partially restored focal polarization in a spa2 loss-of-function mutant without restoring localization of upstream components, thus supporting the pathway order. Thus, we have collected data consistent with a novel positive feedback loop that contributes to focal polarization during pheromone-induced polarization in yeast.
59 BASIC BIOLOGICAL SCIENCES↗
FOCAL Campaign IV: Integrated System Control: Turbine + Hull
Campaign IV of the Floating Offshore-wind Controls Advanced Laboratory Experimental Program (FOCAL) aimed to generate a dataset enabling the validation of a floating offshore wind turbine with turbine and hull controls. The turbine considered in this campaign is the scaled IEA 15MW Reference Wind Turbine similar to the setup considered in FOCAL Campaign I. This turbine is mounted on the VolturnUS platform with integrated hull controls similar to the hull considered in FOCAL Campaign II/III. This system is deployed for a fully-coupled wind and wave testing campaign at the University of Maine's Harold Alfond Wind and Wave (W2) facility. System dynamics and turbine characteristics are measured to determine global performance and assess the effect of the control strategies employed. NREL's reference open-source controller (ROSCO) is used for active blade pitch control and hull structural control is examined through the use of tuned mass dampers (TMD's) tuned to the systems pitch and tower-bending natural frequency. The naming convention of the load cases considered are described in the data details section. Detailed properties on the modeled system are found in the following reference: Lenfest E., Floating Offshore-wind Controls Advanced Laboratory (FOCAL) Experimental Program - Campaign IV: 1:70 Model-scale Testing of the IEA-Wind 15MW Reference Turbine and the VolturnUS-S Platform. UMaine ASCC Report Number 23-57-1183.
17 WIND ENERGY↗
Plasmonic photoconductive terahertz focal-plane array with pixel super-resolution
Abstract Imaging systems operating in the terahertz part of the electromagnetic spectrum are attractive due to their ability to penetrate many opaque materials and provide unique spectral signatures of various chemicals. However, the use of terahertz imagers in real-world applications has been limited by the slow speed, large size, high cost and complexity of present systems, largely due to the lack of suitable terahertz focal-plane array detectors. Here we report a terahertz focal-plane array that can directly provide the spatial amplitude and phase distributions, along with the ultrafast temporal and spectral information of an imaged object. It consists of a two-dimensional array of ~0.3 million plasmonic photoconductive nanoantennas optimized to rapidly detect broadband terahertz radiation with a high signal-to-noise ratio. We utilized the multispectral nature of the amplitude and phase data captured by these plasmonic nanoantennas to image different objects, including super-resolved etched patterns in a silicon substrate and defects in battery electrodes. By eliminating the need for raster scanning and spatial terahertz modulation, our terahertz focal-plane array offers more than a 1,000-fold increase in the imaging speed compared with the state of the art and potentially suits a broad range of applications in industrial inspection, security screening and medical diagnosis, among others.
Optics↗
Improved laser-plasma accelerator stability via high-bandwidth longitudinal focal position stabilization of a 100 TW-class laser system
Laser-plasma accelerators (LPAs) offer an attractive alternative to conventional accelerators for the development of compact electron sources and next-generation light sources. Due to orders-of-magnitude larger accelerating gradients, LPAs enable the acceleration of high-brightness electron beams to ultrarelativistic energies in millimeter- to centimeter-scale distances. However, LPA stability is limited by shot-to-shot fluctuations of the driving laser system. Specifically, fluctuations in the final-focus longitudinal position result in correlated instability in LPA electron beam qualities, including total beam charge, average beam energy, and energy spread. We demonstrate active stabilization of the longitudinal focal position for a 100 TW-class laser system. This repetition-rate scalable stabilization system leverages noninvasive wave front monitoring of a copropagating, unamplified kHz pulse train to guide corrective adjustments to the focal position of a 1 Hz amplified drive laser via an upstream telescope on millisecond timescales. In this demonstration, the approach limits standard deviation fluctuations of the amplified drive beam’s longitudinal focal position to ±0.22 mm (representing at least a 53% reduction), achieved with a correction bandwidth that reaches the Nyquist frequency limit. Consequently, we observe marked improvements in both long-term and shot-to-shot LPA stability in terms of charge and spectrum.
Beam control↗
Modal focal adaptive optics for Bessel-focus two-photon fluorescence microscopy
Adaptive optics (AO) improves the spatial resolution of microscopy by correcting optical aberrations. While its application has been well established in microscopy modalities utilizing a circular pupil, its adaptation to systems with non-circular pupils, such as Bessel-focus two-photon fluorescence microscopy (2PFM) with an annular pupil, remains relatively uncharted. Herein, we present a modal focal AO (MFAO) method for Bessel-focus 2PFM. Measuring and correcting aberration using a spatial light modulator placed in conjugation with the focal plane of the microscope objective, MFAO employs Zernike annular polynomials — a first in AO implementation — to achieve performance on par with a previous zonal AO method, but with a notably simplified optical configuration. We validated the performance of MFAO in correcting artificial and sample-induced aberrations, as well as in in vivo imaging of zebrafish larvae and mouse brains. By expanding the application of modal AO to annular pupils as well as aberration measurement and correction to a wavefront modulator at the objective focal plane, MFAO represents a notable advancement in the implementation of AO in microscopy.
47 OTHER INSTRUMENTATION↗
Interferometric focal planes
We propose arrays of integrated interferometers to characterize the mutual intensity on focal planes. While focal coherence measurement does not increase the aperture-limited spatial bandpass, it can increase Shannon information capacity relative to irradiance measurement by increasing the number of degrees of freedom per Nyquist sample. We describe a sampling model for interferometric measurement using arrays of 2-port Mach-Zehnder interferometers and show within this model that interferometric focal planes enable more accurate estimation of prototypical scene parameters.
Brady, David J. (ORCID:0000000156552478)↗
FOCAL Campaign I: Advanced Wind Turbine Control Strategies
Campaign I of the Floating Offshore-wind Controls Advanced Laboratory Experimental Program (FOCAL) aims to generate a dataset enabling the validation of aerodynamic performance of a scaled turbine mounted on a rigid tower in a fixed condition. The turbine considered in the FOCAL testing campaigns is the IEA-Wind 15MW Reference Wind Turbine. This scaled model is capable of simulating advanced blade-pitch control strategies in a high-quality wind field. The turbine is fully instrumented to record a variety of parameters in real time such as structural loads and dynamics. The test data considered was generated at the University of Maine's Harold Alfond Wind and Wave (W2) testing facility. The Load Cases (LC) considered in this testing campaign are as follows: LC 1.X - Constant wind and blade-pitch with varying rotor speeds LC 2.X - Constant wind and rotor speed with varying blade-pitch LC 3.X - Varying wind with active closed-loop control Detailed properties on the modeled system are found in the following reference: Lenfest E., Floating Offshore-wind Controls Advanced Laboratory (FOCAL) Experimental Program - Campaign I: 1:70 Model-scale Testing of the IEA-Wind 15MW Reference Turbine. UMaine ASCC Report Number 23-40-1183. Details on the results of the verification and validation are found in the following reference: Mendoza, Nicole et al., "Verification and Validation of Model-Scale Turbine Performance and Control for the IEA Wind 15 MW Reference Wind Turbine," Energies, vol. 15, no. 20, 2022, https://doi.org/10.3390/en15207649.
17 WIND ENERGY↗
Laboratory Measurements of Instrumental Signatures of the LSST Camera Focal Plane
Electro-optical testing and characterization of the Vera C. Rubin Observatory Legacy Survey of Space and Time (LSST) Camera focal plane, consisting of 205 charge-coupled devices (CCDs) arranged into 21 stand-alone Raft Tower Modules (RTMs) and 4 Corner Raft Tower Modules (CRTMs), is currently being performed at the SLAC National Accelerator Laboratory. Testing of the camera sensors is performed using a set of custom-built optical projectors, designed to illuminate the full focal plane or specific regions of the focal plane with a series of light illumination patterns: the crosstalk projector, the flat illuminator projector, and the spot grid projector. In addition to measurements of crosstalk, linearity and full well, the ability to project realistically-sized sources, using the spot grid projector, makes possible unique measurements of instrumental signatures such as deferred charge distortions, astrometric shifts due to sensor effects, and the brighter-fatter effect, prior to camera first light. Here we present the optical projector designs and usage, the electro-optical measurements and how these results have been used in testing and improving the LSST Camera instrumental signature removal algorithms.
79 ASTRONOMY AND ASTROPHYSICS↗
Physics‐based iterative reconstruction for dual‐source and flying focal spot computed tomography
Purpose For single‐source helical Computed Tomography (CT), both Filtered‐Back Projection (FBP) and statistical iterative reconstruction have been investigated. However, for dual‐source CT with flying focal spot (DS‐FFS CT), a statistical iterative reconstruction that accurately models the scanner geometry and acquisition physics remains unknown to researchers. Therefore, our purpose is to present a novel physics‐based iterative reconstruction method for DS‐FFS CT and assess its image quality. Methods Our algorithm uses precise physics models to reconstruct from the native cone‐beam geometry and interleaved dual‐source helical trajectory of a DS‐FFS CT. To do so, we construct a noise physics model to represent data acquisition noise and a prior image model to represent image noise and texture. In addition, we design forward system models to compute the locations of deflected focal spots, the dimension, and sensitivity of voxels and detector units, as well as the length of intersection between x‐rays and voxels. The forward system models further represent the coordinated movement between the dual sources by computing their x‐ray coverage gaps and overlaps at an arbitrary helical pitch. With the above models, we reconstruct images by an advanced Consensus Equilibrium (CE) numerical method to compute the maximum a posteriori estimate to a joint optimization problem that simultaneously fits all models. Results We compared our reconstruction with Siemens ADMIRE, which is the clinical standard hybrid iterative reconstruction (IR) method for DS‐FFS CT, in terms of spatial resolution, noise profile, and image artifacts through both phantoms and clinical scan datasets. Experiments show that our reconstruction has a higher spatial resolution, with a Task‐Based Modulation Transfer Function (MTF task ) consistently higher than the clinical standard hybrid IR. In addition, our reconstruction shows a reduced magnitude of image undersampling artifacts than the clinical standard. Conclusions By modeling a precise geometry and avoiding data rebinning or interpolation, our physics‐based reconstruction achieves a higher spatial resolution and fewer image artifacts with smaller magnitude than the clinical standard hybrid IR.
Wang, Xiao↗
Design of the SPT-SLIM Focal Plane: A Spectroscopic Imaging Array for the South Pole Telescope
The Summertime Line Intensity Mapper (SLIM) is a mm-wave line-intensity mapping (mm-LIM) experiment for the South Pole Telescope (SPT). The goal of SPT-SLIM is to serve as a technical and scientific pathfinder for the demonstration of the suitability and in-field performance of multi-pixel superconducting filterbank spectrometers for future mm-LIM experiments. Scheduled to deploy in the 2023-24 austral summer, the SPT-SLIM focal plane will include 18 dual-polarisation pixels, each coupled to an $R = \lambda / \Delta \lambda = 300$ thin-film microstrip filterbank spectrometer that spans the 2 mm atmospheric window (120–180 GHz). Each individual spectral channel feeds a microstrip-coupled lumped-element kinetic inductance detector, which provides the highly multiplexed readout for the 10k detectors needed for SPT-SLIM. Here, we present an overview of the preliminary design of key aspects of the SPT-SLIM focal plane array, a description of the detector architecture and predicted performance, and initial test results that will be used to inform the final design of the SPT-SLIM spectrometer array.
46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
Influence of Fault Architecture on Induced Earthquake Sequence Evolution Revealed by High-Resolution Focal Mechanism Solutions
The increasing seismicity and improved seismic observation network in recent years provide an opportunity to explore factors that influence the triggering processes, spatiotemporal evolution, and maximum magnitude of induced sequences. We map the fault architecture and stress state of four induced sequences in Oklahoma to determine their influence on the seismicity. We systematically relocate the earthquakes and compute hundreds of focal mechanisms of small to medium events (1.0 < M < 5.1) using various techniques, including machine learning, for the Guthrie, Woodward, Cushing, and Fairview sequences. The detailed fault geometry and spatiotemporal evolution of seismicity and stress states reveal different dominant driving forces for each sequence. In Cushing and Fairview (largest event ≥M5.0), the main fault structures are near-vertical narrow strike-slip faults, with most of the small earthquake fault planes optimally oriented. The two sequences exhibit discontinuous temporal migration but strong earthquake self-driven rupture growth. In Guthrie and Woodward (largest event <M5.0), the two sequences show more complex diffuse fault structures with varying dipping angles along depth. The inverted focal mechanisms show a mix of strike-slip faulting and normal faulting in both sequences, and the normal faulting events are less optimally oriented than strike-slip events. The two sequences are dominated by continuous diffusive migration in time driven by pore pressure propagation. The above results suggest that fault architecture and stress state influence sequence evolution, major driving forces, and possibly maximum magnitude.
58 GEOSCIENCES↗
Target normal sheath acceleration with a large laser focal diameter
In this work, the dependence of the laser-driven ion acceleration from thin titanium foils in the Target Normal Sheath Acceleration (TNSA) regime on target and laser parameters is explored using two dimensional particle-in-cell simulations. The oblique incidence (θ L = 45°) and large focal spot size (w 0 = 40μm) are chosen to take an advantage of quasi one-dimensional geometry of sheath fields and effective electron heating. This interaction setup also reveals low and achromatic angular divergence of a proton beam. It is shown that the hot electron temperature deviates from the ponderomotive scaling for short laser pulses and small pre-plasmas. This deviation is mainly due to the laser sweeping, as the short duration laser pulse each moment in time effectively heats only a fraction of a focal spot on the foil. This instantaneous partial heating results in an electron temperature deviation from the ponderomotive scaling and, thus, lower maximum proton energies than it could have been expected from the TNSA theory.
70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
Vector meson photoproduction in UPCs with FoCal
Abstract We discuss the physics prospects of photon-induced measurements using the high-granularity FoCal detector to be installed at the ALICE experiment, covering the pseudorapidity interval 3.4 ≤ η ≤ 5.8. This new detector, scheduled to be in operation from Run 4, will explore the small Bjorken- x physics region in an unprecedented way. In this region the gluon ,saturation phenomenon is expected to be dominant. Combined with the rest of the ALICE subdetectors, including the zero degree calorimenters, FoCal will serve to reconstruct in a model-independent way the measured photoproduction cross sections for vectors mesons in a wide range of photon-target energies, down to x values of about 7 × 10 −6 and 2 × 10 −6 in ultra-peripheral photon–proton and photon–lead collisions, respectively.
73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗