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Easy, Scalable Subsetting of GEDI Point Clouds

The GEDI Subsetter, a Python tool developed for NASA’s Multi-mission Algorithm and Analysis Platform (MAAP), optimizes the accessibility and visualization of GEDI point clouds by enabling users to efficiently subset data in a convenient, scalable manner. Complex science data often requires users to learn new software skills and handle many large files. Handling and cleaning large data sets is tedious and error-prone. These challenges significantly impede analysis. One of the goals of NASA's MAAP is to provide a platform that lowers the barrier to conducting research and analysis at scale. When a group of MAAP users wanted to conduct above-ground biomass estimation using GEDI data, we found that their existing workflow for leveraging GEDI data suffered from the barriers mentioned above. Furthermore, their workflow did not scale easily beyond a small number of granules. We found that existing tools related to GEDI data retrieval and subsetting were too limiting, so the GEDI Subsetter was written to support MAAP users’ needs. Being able to run many subsetting jobs simultaneously in the MAAP, and parallelizing the code itself, has led to significant speed improvements in obtaining relevant data, reducing subsetting time from hours to minutes. MAAP users can now more quickly and easily obtain only the data relevant to their research, by choosing which GEDI collection they want to work with (L1A, L2A, L2B, or L4A), and how they want to subset it, by specifying an area of interest, a temporal range, and relevant attributes. This has significantly reduced the feedback loop for users, allowing them to much more quickly subset GEDI data and begin their analysis. Although the GEDI Subsetter originally targeted users of the MAAP, it is generalized such that it can also be used outside of the MAAP and includes a command-line interface for convenience. Furthermore, with minor modifications, it should be possible to use it with non-GEDI data as the general pattern should be applicable to other sparse/track-based sensors.

Charles Daniels↗

Biomass Estimation from Simulated GEDI, ICESat-2 and NISAR Across Environmental Gradients in Sonoma County, California

Estimates of the magnitude and distribution of aboveground carbon in Earth’s forests remain uncertain, yet knowledge of forest carbon content at a global scale is critical for forest management in support of climate mitigation. In light of this knowledge gap, several upcoming spaceborne missions aim to map forest aboveground biomass, and many new biomass products are expected from these datasets. As these new missions host different technologies, each with relative strengths and weaknesses for biomass retrieval, as well as different spatial resolutions, consistently comparing or combining biomass estimates from these new datasets will be challenging. This paper presents a demonstration of an inter-comparison of biomass estimates from simulations of three NASA missions (GEDI, ICESat-2 and NISAR) over Sonoma county in California, USA. We use a high resolution, locally calibrated airborne lidar map as our reference dataset, and emphasize the importance of considering uncertainties in both reference maps and spaceborne estimates when conducting biomass product validation. GEDI and ICESat-2 were simulated from airborne lidar point clouds, while UAVSAR’s L-band backscatter was used as a proxy for NISAR. To estimate biomass for the lidar missions we used GEDI’s footprint-level biomass algorithms, and also adapted these for application to ICESat-2. For UAVSAR, we developed a locally trained biomass model, calibrated against the ALS reference map. Each mission simulation was evaluated in comparison to the local reference map at its native product resolution (25 m, 100m transect, and 1 ha) yielding RMSEs of 57%, 75%, and 89% for GEDI, NISAR, and ICESat-2 respectively. RMSE values increased for GEDI’s power beam during simulated daytime conditions (64%), coverage beam during nighttime conditions (72%), and coverage beam daytime conditions (87%). We also test the application of GEDI’s biomass modeling framework for estimation of biomass from ICESat-2, and fine that ICESat-2 yields reasonable biomass estimates, particularly in relatively short, open canopies. Results suggest that while all three missions will produce datasets useful for biomass mapping, tall, dense canopies such as those found in Sonoma County present the greatest challenges for all three missions, while steep slopes also prove challenging for single-date SAR based biomass retrieval. Our methods provide guidance for the inter-comparison and validation of spaceborne biomass estimates through the use of airborne lidar reference maps, and could be repeated with on-orbit estimates in any area with high quality field plot and ALS data. These methods allow for regional interpretations and filtering of multi-mission biomass estimates toward improved wall-to-wall biomass maps through data fusion.

GEDI↗

Forest aboveground biomass estimation through integration of sentinel-2 and PALSAR-2 time series: assessing models trained on GEDI and field inventory benchmarks

Accurate and spatially explicit forest Aboveground Biomass (AGB) mapping through remote sensing is critical for quantifying terrestrial carbon stocks and informing effective forest management strategies. However, AGB estimation in dense forests with complex terrain remains challenging due to satellite sensor signal saturation problem (saturation issue occurs in high biomass forests), structural complexity, and limited ground truth for calibration. This study presents a novel framework that integrates multi-temporal Sentinel-2 optical imagery, ALOS PALSAR-2 Synthetic Aperture Radar (SAR) data, and topographic variables with explainable Machine Learning to map AGB across mountainous forests within subtropical and temperate oceanic climate zones of Mexico. We evaluate the effects of temporal granularity and sensor synergy by comparing multiple temporal inputs and sensor configurations (Sentinel-2, PALSAR-2, and their fusion), and assess model performance using two reference datasets: NASA GEDI LiDAR-derived biomass and Mexico’s National Forest and Soil Inventory (INFyS). Our results showed that models trained on INFyS consistently outperformed those trained on GEDI, highlighting limitations in GEDI’s reliability in biomass estimates within this study region. Furthermore, the integration of Sentinel-2 and PALSAR-2 provided improved predictions compared to single-sensor models, particularly when combined with temporally explicit yearly statistics. The best-performing model, which was trained on INFyS data, and considered both Sentinel-2 and PALSAR-2 yearly statistics, as well as topographic variables, achieved an R2 of 0.64, RMSE of 51.10 Mg/ha, and relative RMSE (rRMSE) of 58.69%. Explainable ML analysis identified Sentinel-2 spectral indices and topographic features as key predictors, while PALSAR-2 metrics provided complementary information, partially mitigating saturation effects in high-biomass areas. Specifically, integrating both sensors substantially improved AGB estimation in high biomass forest (≥200 Mg/ha), yielding 98% gains over optical-only model, with resulting estimates exceeding GEDI L4B by 29% and ESA-CCI-BIOMASS by 174%. Terrain-stratified analysis indicated close agreement with GEDI in low-slope areas, with increasing divergence as slope steepness increased, while estimates remained consistently higher than ESA-CCI-BIOMASS across all slope classes. The proposed approach advances multi-sensor fusion and temporal feature engineering for AGB mapping using open-access satellite datasets, providing a scalable and reproducible framework for annual biomass monitoring in topographically complex mountainous forests. The resulting 25 m resolution biomass product has the potential to provide spatially detailed information for forest monitoring and may support applications in carbon accounting and forest management.

54 ENVIRONMENTAL SCIENCES↗

Aboveground biomass density models for NASA’s Global Ecosystem Dynamics Investigation (GEDI) lidar mission

NASA's Global Ecosystem Dynamics Investigation (GEDI) is collecting spaceborne full waveform lidar data with a primary science goal of producing accurate estimates of forest aboveground biomass density (AGBD). This paper presents the development of the models used to create GEDI's footprint-level (~25 m) AGBD (GEDI04_A) product, including a description of the datasets used and the procedure for final model selection. The data used to fit our models are from a compilation of globally distributed spatially and temporally coincident field and airborne lidar datasets, whereby we simulated GEDI-like waveforms from airborne lidar to build a calibration database. We used this database to expand the geographic extent of past waveform lidar studies, and divided the globe into four broad strata by Plant Functional Type (PFT) and six geographic regions. GEDI's waveform-to-biomass models take the form of parametric Ordinary Least Squares (OLS) models with simulated Relative Height (RH) metrics as predictor variables. From an exhaustive set of candidate models, we selected the best input predictor variables, and data transformations for each geographic stratum in the GEDI domain to produce a set of comprehensive predictive footprint-level models. We found that model selection frequently favored combinations of RH metrics at the 98th, 90th, 50th, and 10th height above ground-level percentiles (RH98, RH90, RH50, and RH10, respectively), but that inclusion of lower RH metrics (e.g. RH10) did not markedly improve model performance. Second, forced inclusion of RH98 in all models was important and did not degrade model performance, and the best performing models were parsimonious, typically having only 1-3 predictors. Third, stratification by geographic domain (PFT, geographic region) improved model performance in comparison to global models without stratification. Fourth, for the vast majority of strata, the best performing models were fit using square root transformation of field AGBD and/or height metrics. There was considerable variability in model performance across geographic strata, and areas with sparse training data and/or high AGBD values had the poorest performance. These models are used to produce global predictions of AGBD, but will be improved in the future as more and better training data become available.

54 ENVIRONMENTAL SCIENCES↗

Aboveground biomass density models for NASA’s Global Ecosystem Dynamics Investigation (GEDI) lidar mission

NASA’s Global Ecosystem Dynamics Investigation (GEDI) is collecting spaceborne full waveform lidar data with a primary science goal of producing accurate estimates of forest aboveground biomass density (AGBD). This paper presents the development of the models used to create GEDI’s footprint-level (~25 m) AGBD (GEDI04_A) product, including a description of the datasets used and the procedure for final model selection. The data used to fit our models are from a compilation of globally distributed spatially and temporally coincident field and airborne lidar datasets, whereby we simulated GEDI-like waveforms from airborne lidar to build a calibration database. We used this database to expand the geographic extent of past waveform lidar studies, and divided the globe into four broad strata by Plant Functional Type (PFT) and six geographic regions. GEDI’s waveform-to-biomass models take the form of parametric Ordinary Least Squares (OLS) models with simulated Relative Height (RH) metrics as predictor variables. From an exhaustive set of candidate models, we selected the best input predictor variables, and data transformations for each geographic stratum in the GEDI domain to produce a set of comprehensive predictive footprint-level models. We found that model selection frequently favored combinations of RH metrics at the 98th, 90th, 50th, and 10th height above ground-level percentiles (RH98, RH90, RH50, and RH10, respectively), but that inclusion of lower RH metrics (e.g. RH10) did not markedly improve model performance. Second, forced inclusion of RH98 in all models was important and did not degrade model performance, and the best performing models were parsimonious, typically having only 1-3 predictors. Third, stratification by geographic domain (PFT, geographic region) improved model performance in comparison to global models without stratification. Fourth, for the vast majority of strata, the best performing models were fit using square root transformation of field AGBD and/or height metrics. There was considerable variability in model performance across geographic strata, and areas with sparse training data and/or high AGBD values had the poorest performance. These models are used to produce global predictions of AGBD, but will be improved in the future as more and better training data become available.

Laura Duncanson↗

Gene Expression Dynamics Inspector (GEDI): for integrative analysis of expression profiles

Genome-wide expression profiles contain global patterns that evade visual detection in current gene clustering analysis. Here, a Gene Expression Dynamics Inspector (GEDI) is described that uses self-organizing maps to translate high-dimensional expression profiles of time courses or sample classes into animated, coherent and robust mosaics images. GEDI facilitates identification of interesting patterns of molecular activity simultaneously across gene, time and sample space without prior assumption of any structure in the data, and then permits the user to retrieve genes of interest. Important changes in genome-wide activities may be quickly identified based on 'Gestalt' recognition and hence, GEDI may be especially useful for non-specialist end users, such as physicians. AVAILABILITY: GEDI v1.0 is written in Matlab, and binary Matlab.dll files which require Matlab to run can be downloaded for free by academic institutions at http://www.chip.org/~ge/gedihome.html Supplementary information: http://www.chip.org/~ge/gedihome.html.

Database Management Systems↗

GEDI Launches a New Era of Biomass Inference from Space

Accurate estimation of aboveground forest biomass stocks is required to assess the impacts of land use changes such as deforestation and subsequent regrowth on concentrations of atmospheric CO 2 . The Global Ecosystem Dynamics Investigation (GEDI) is a lidar mission launched by NASA to the International Space Station in 2018. GEDI was specifically designed to retrieve vegetation structure within a novel, theoretical sampling design that explicitly quantifies biomass and its uncertainty across a variety of spatial scales. In this paper we provide the estimates of pan-tropical and temperate biomass derived from two years of GEDI observations. We present estimates of mean biomass densities at 1 km resolution, as well as estimates aggregated to the national level for every country GEDI observes, and at the sub-national level for the United States. For all estimates we provide the standard error of the mean biomass. These data serve as a baseline for current biomass stocks and their future changes, and the mission’s integrated use of formal statistical inference points the way towards the possibility of a new generation of powerful monitoring tools from space.

Ralph Dubayah↗

Mission Status, On-Orbit Performance, and Lessons Learned of the Global Ecosystem Dynamics Investigation (GEDI) Lidar Laser Transmitters

The Global Ecosystems Dynamics Investigation (GEDI) Lidar, is a global 3-dimensional biomass lidar instrument aboard the International Space Station (ISS) and the Japanese Experiment Module (JEM). Its core mission is to measure the global carbon balance of Earth’s forests with 3 laser transmitters using multi-beam waveform-capture methods. GEDI’s laser transmitter concept was originally funded by NASA Goddard’s Earth Science Technology Office (ESTO) for future Earth Altimetry and Lidar missions ~ 20 years ago, and after a long road of development, the first flight-ready unit was a 10 mJ-class system for GEDI’s ISS-based specifications. Furthermore, no adjustment in drive parameters has been required nor significant decay detected after 4 years of near continuous operation of 3 on-board lasers, which were designed for a 2-year mission. We report on the GEDI laser design process, their on-orbit performance, the major lessons learned, and some critical insight into our in-house flight quality development process that enabled their delivery within budget, schedule, and low risk extended mission life capability.

D. Barry Coyle↗

The Global Ecosystem Dynamics Investigation (GEDI) Lidar Laser Transmitter

The Global Ecosystems Dynamics Investigation (GEDI) Lidar, is an Earth Science remote sensing instrument aboard the International Space Station (ISS) and the Japanese Experiment Module (JEM). Its core mission is to measure the global carbon balance of Earth's forests by using a set of three solid state laser transmitters in a multibeam waveform capture lidar technique. GEDI's laser transmitters and precision optical system transmits over 3.4 million laser pulses to the Earth every hour, each pulse producing an individual 3-D biomass column measurement. To enable a successful two-year mission, the lasers had to be reliable, highly repeatable in performance with each measurement power cycle, and designed with minimal part count for reduced manufacture complexity and cost. These transmitters are in-house products; developed, constructed, qualified, and fully integrated into the GEDI instrument at NASA's Goddard Space Flight Center. We will present the lasers' path from initial design to flight operation, with emphasis on the major milestones, critical issues, and lessons learned. Full credit goes to the excellent team effort that led to the successful commissioning and initiation of full-time science operations in March 2019.

Coyle, D. Barry↗

Advanced Silicon Avalanche Photodiodes on NASA's Global Ecosystem Dynamics Investigation (GEDI) Mission

Silicon Avalanche Photodiodes (APDs) are used in NASA’s Global Ecosystem Dynamics Investigation (GEDI) which was launched in December 2018 and is currently measuring the Earth’s vegetation vertical structure from the International Space Station. The APDs were specially made for space lidar with a much lower hole-to-electron ionization coefficient ratio (k-factor ~0.008) than that of commercially available silicon APDs in order to reduce the APD excess noise from the randomness of the avalanche gain. A silicon heater resistor was used under the APD chip to heat the device up to 70°C and improve its quantum efficiency at 1064 nm laser wavelength while maintaining a low dark current such that the overall signal to noise ratio is improved. Special APD protection circuits were used to raise the overload damage threshold to prevent device damage from strong laser return by specular surfaces, such as still water bodies, and space radiation events. The APD and a hybrid transimpedance amplifier circuit were hermetically sealed in a package with a sufficiently low leak rate to ensure multi-year operation lifetime in space. The detector assemblies underwent a series of pre-launch tests per NASA Goddard Environmental Verification Standard for space qualification. They have performed exactly as expected with GEDI in orbit. A detailed description of the GEDI detector design, signal and noise model, and test results are presented in this paper.

Sun, Xiaoli↗

High Output Maximum Efficiency Resonator (HOMER) Laser for NASA's Global Ecosystem Dynamics Investigation (GEDI) Lidar Mission

The Global Ecosystems Dynamics Investigation (GEDI) is a planned mission sending a LIDAR instrument to the International Space Station that will employ three NASA laser transmitters. This instrument will produce parallel tracks on the Earth's surface that will provide global 3D vegetation canopy measurements. To meet the mission goals a total of 5 High Output Maximum Efficiency Resonator lasers will to be built (1 ETU + 3 Flight + 1 spare) in-house at NASA-GSFC. This presentation will summarize the HOMER design, the testing the design has completed in the past, and the plans to successfully build the units needed for the GEDI mission.

soil↗

Laser Pulse Production for NASA's Global Ecosystem Dynamics Investigation (GEDI) Lidar

The Lasers and Electro-Optics Branch at Goddard Space Flight Center has been tasked with building the Lasers for the Global Ecosystems Dynamics Investigation (GEDI) Lidar Mission, to be installed on the Japanese Experiment Module (JEM) on the International Space Station (ISS). GEDI will use three NASA-developed lasers, each coupled with a Beam Dithering Unit (BDU) to produce three sets of staggered footprints on the Earth's surface to accurately measure global biomass. We will report on the design, assembly progress, test results, and delivery process of this laser system.

Laser Oscillator↗

Laser Pulse Production for NASA's Global Ecosystem Dynamics Investigation (GEDI) Lidar

The Lasers and Electro-Optics Branch at Goddard Space Flight Center has been tasked with building the Lasers for the Global Ecosystems Dynamics Investigation (GEDI) Lidar Mission, to be installed on the Japanese Experiment Module (JEM) on the International Space Station (ISS)1. GEDI will use three NASA-developed lasers, each coupled with a Beam Dithering Unit (BDU) to produce three sets of staggered footprints on the Earth's surface to accurately measure global biomass. We will report on the design, assembly progress, test results, and delivery process of this laser system.

Laser Oscillator↗

Component-Level Selection and Qualification for the Global Ecosystem Dynamics Investigation (GEDI) Laser Altimeter Transmitter

Flight quality solid-state lasers require a unique and extensive set of testing and qualification processes, both at the system and component levels to insure the laser's promised performance. As important as the overall laser transmitter design is, the quality and performance of individual subassemblies, optics, and electro-optics dictate the final laser unit's quality. The Global Ecosystem Dynamics Investigation (GEDI) laser transmitters employ all the usual components typical for a diode-pumped, solid-state laser, yet must each go through their own individual process of specification, modeling, performance demonstration, inspection, and destructive testing. These qualification processes and results for the laser crystals, laser diode arrays, electro-optics, and optics, will be reviewed as well as the relevant critical issues encountered, prior to their installation in the GEDI flight laser units.

Frese, Erich A.↗

Global Ecosystem Dynamics Investigation (GEDI) Instrument Alignment and Test

NASA's Global Ecosystem Dynamics Investigation (GEDI) instrument was launched Dec. 5, 2018, and installed on the International Space Station 419 km from Earth. The GEDI is a Light Detection and Ranging (LIDAR) instrument; measuring the time of flight of transmitted laser beams to the Earth and back to determine altitude for geospatial mapping of forest canopy heights. The need for very dense cross track sampling for slope measurements of canopy height is accomplished by using three individual laser transmitter systems, where each beam is split into two beams by a birefringent crystal. Furthermore, one transmitter is equipped with a diffractive optical element splitting the two beams into four, for a total of 8 beams. The beams are reflected off of the features and imaged by an 800 mm diameter Receiver Telescope Assembly, composed of a Ritchey-Chretien telescope, a refractive aft optics assembly and focal plane array which collects and focuses the light from the 8 probe beams into the 8 science fibers, each with a field of view on the Earth subtending 300 mu rad. The dense cross-track sampling mandated a custom designed dual-fiber interface. The science fibers had to be aligned to the nominal, projected laser spots. The alignment was highly dependent on optimization and co-positioning of the fibers pair-wise due to mechanical constraints. This paper presents the end-to-end alignment and metrology of the full optical system from transmitter elements through receiver telescope, aft-optics, focal plane and receiver fibers performed at NASA Goddard Space Flight Center.[GRAPHICS]

Bente Eegholm↗

Mapping National Forest Aboveground Biomass in Mexico by Integrating GEDI, Sentinel‐1 and Sentinel‐2 Data

Accurate mapping of forest aboveground biomass density (AGBD) is required to better understand the role of forests in the global carbon cycle and to support international policies for climate change mitigation and adaptation. Mexico is one of the countries having great potential for the United Nations Programme on Reducing Emissions from Deforestation and Forest Degradation (or UN-REDD program) and there is a growing demand for unbiased Monitoring Reporting Verification systems at a national level. As an effort under NASA’s Carbon Monitoring System (CMS) program, we developed a machine learning model using multi-stream remote sensing measurements as well as topographic data to create a high spatial resolution AGBD map (~100 m) over Mexico (circa 2020). The remote sensing data includes Global Ecosystem Dynamic Investigation (GEDI) lidar, Sentinel 1 Synthetic-Aperture Radar (SAR), and Sentinel-2 multispectral imagery (MSI). GEDI onboard the International Space Station provides unprecedented forest structure and AGBD sampling datasets for model training and validation practices. Our analysis indicates that the developed random forest model can capture 63 % of the spatial variation (RMSE = 33.7 Mg/ha) of AGBD of Mexican forests. We find that shortwave infrared bands of Sentinel-2 MSI and topographical variables from elevation data are the most important variables in the developed AGBD model. Our study highlights methodological opportunities in synergistic uses of multiple sensors for large-scale forest AGBD mapping and shows potential for retrospective analysis and operational monitoring of forest AGBD and its dynamics.

Taejin Park↗

Mapping National Forest Aboveground Biomass in Mexico By Integrating GEDI and Landsat Times Series Data

Mexico is one of the countries with great potential for the UN's Reducing Emissions from Deforestation and Forest Degradation (REDD+) program, a key nature-based solution for the forest sector. To monitor carbon stock changes, there is a growing demand for unbiased Monitoring Reporting Verification (MRV) systems to facilitate effective forest management and climate change mitigation strategies. Remote sensing-based national aboveground biomass density (AGBD) estimation over Mexico is scarce and often limited to one-time static mapping, leading to spatiotemporal inconsistency in inputs. As an effort under NASA's Carbon Monitoring System (CMS) program, we have developed a remote sensing-based approach to create consistent historical AGBD maps of Mexico using multi-stream remote sensing data, including spaceborne lidar GEDI and long-term Landsat time series, as well as topographic information. We employ the continuous change detection and classification (CCDC) algorithm for temporal modeling of Landsat surface reflectance, followed by the inference of forest AGBD using a random forest machine learning algorithm with the temporal information of land surface dynamics extracted by the CCDC as input. GEDI provides unprecedented forest structure and AGBD sampling datasets for model training and validation practices. In this presentation, we share the progress made in developing a spatially explicit mapping of historical AGBD changes associated with land surface changes and post-disturbance landscapes.

Taejin Park↗

Global Ecosystem Dynamics Investigation (GEDI) Structural Verification Unit (SVU) Vibration Test

This presentation describes the vibration test campaign of the Structural Verification Unit for the Global Ecosystem Dynamics Investigation (GEDI) mission The Structural Verification Unit test campaign served multiple purposes including the qualification of the instrument primary structure, verification of the structure's stiffness, Aperture Control Mechanism assembly level verification, and validation of the control approach for protoflight instrument vibration testing. Testing included three axes of sine burst, random, and sine vibration excitation. This test sequence required a high number of response instrumentation sensors that included tri-axial accelerometers and tri-axial force gauges. Multiple response limiting methods that included acceleration, force, and moment measurements were used to ensure the safety of the flight hardware. The lessons and specific test details learned on the structural verification unit test campaign will reduce test risks for the upcoming instrument-level vibration tests.

Structural Verification Unit↗