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All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

New constraints on warm dark matter from the Lyman- α forest power spectrum

The forest of Lyman-α absorption lines detected in the spectra of distant quasars encodes information on the nature and properties of dark matter and the thermodynamics of diffuse baryonic material. Its main observable—the 1D flux power spectrum (FPS)—should exhibit a suppression on small scales and an enhancement on large scales in warm dark matter (WDM) cosmologies compared to standard Λ⁢CDM. Here, we present an unprecedented suite of 1080 high-resolution cosmological hydrodynamical simulations run with the graphics processing unit-accelerated code cholla to study the evolution of the Lyman-α forest under a wide range of physically motivated gas thermal histories along with different free-streaming lengths of WDM thermal relics in the early Universe. A statistical comparison of synthetic data with the forest FPS measured down to the smallest velocity scales ever probed at redshifts 4.0≲z≲5.2 [E. Boera et al., Revealing reionization with the thermal history of the intergalactic medium: New constraints from the Ly⁢α flux power spectrum, Astrophys. J. 872, 101 (2019)] yields a lower-limit m WDM >3.1 keV (95% C.L.) for the WDM particle mass and constrains the amplitude and spectrum of the photoheating and photoionizing background produced by star-forming galaxies and active galactic nuclei at these redshifts. Interestingly, our Bayesian inference analysis appears to weakly favor WDM models with a peak likelihood value at the thermal relic mass of m WDM =4.5 keV. In conclusion, we find that the suppression of the FPS from free-streaming saturates at k≳0.1 s km -1 because of peculiar velocity smearing, and this saturated suppression combined with a slightly lower gas temperature provides a moderately better fit to the observed small-scale FPS for WDM cosmologies.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2025

Light in the dark forest. Part I. An efficient optimal estimator for 3D Lyman-alpha forest power spectrum

The highly anisotropic nature of the Lyman-alpha (Lyα) forest data introduces a complex survey window function that complicates the measurement of the three-dimensional power spectrum ( P 3D ). In this paper, we present the first fully optimal estimator for P 3D , which exactly deconvolves the survey window function and marginalizes contaminated modes that distort the power spectrum. Our approach adapts optimal estimator techniques developed for the 2D cosmic microwave background data to the 3D case. To achieve computational feasibility, we employ the conjugate gradient method and implement the P 3 M formalism to handle large-scale and small-scale operations separately and efficiently. We validate our estimator using Monte Carlo mocks and Gaussian simulations, demonstrating its accuracy and computational efficiency. We confirm that mode marginalization eliminates distortions arising from quasar continuum errors and delivers robust power spectrum estimation, though it also inflates errors at large scales. This first implementation works in the flat-sky case; we discuss the remaining steps needed to generalize it to the curved-sky case. This formalism offers a foundation for the Lyα forest P 3D measurements and a new path toward cosmological constraints from the Lyα forest data.

Lyman alpha forest↗
DOE OSTI2024

Measurement of the small-scale 3D Lyman- α forest power spectrum

Small-scale correlations measured in the Lyman-α (Lyα) forest encode information about the intergalactic medium and the primordial matter power spectrum. In this article, we present and implement a simple method to measure the 3-dimensional power spectrum, P 3D , of the Lyα forest at wavenumbers k corresponding to small, ~ Mpc scales. In order to estimate P 3D from sparsely and unevenly distributed data samples, we rely on averaging 1-dimensional Fourier Transforms, as previously carried out to estimate the 1-dimensional power spectrum of the Lyα forest, P 1D . Further, this methodology exhibits a very low computational cost. We confirm the validity of this approach through its application to Nyx cosmological hydrodynamical simulations. Subsequently, we apply our method to the eBOSS DR16 Lyα forest sample, providing as a proof of principle, a first P 3D measurement averaged over two redshift bins z = 2.2 and z = 2.4. This work highlights the potential for forthcoming P 3D measurements, from upcoming large spectroscopic surveys, to untangle degeneracies in the cosmological interpretation of P 1D .

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2024

The 3D Lyman- α forest power spectrum from eBOSS DR16

We measure the three-dimensional power spectrum (P3D) of the transmitted flux in the Lyman-α (Ly α) forest using the complete extended Baryon Oscillation Spectroscopic Survey data release 16 (eBOSS DR16). This sample consists of ~205 000 quasar spectra in the redshift range 2 ≤ z ≤ 4 at an effective redshift z = 2.334. We propose a pair-count spectral estimator in configuration space, weighting each pair by exp( i k ∙ r), for wave vector k and pixel pair separation r, effectively measuring the anisotropic power spectrum without the need for fast Fourier transforms. This accounts for the window matrix in a tractable way, avoiding artefacts found in Fourier-transform based power spectrum estimators due to the sparse sampling transverse to the line of sight of Ly α skewers. We extensively test our pipeline on two sets of mocks: (i) idealized Gaussian random fields with a sparse sampling of Ly α skewers, and (ii) log-normal LyaCoLoRe mocks including realistic noise levels, the eBOSS survey geometry and contaminants. On eBOSS DR16 data, the Kaiser formula with a non-linear correction term obtained from hydrodynamic simulations yields a good fit to the power spectrum data in the range $(0.02 ≤ k ≤ 0.35)$ h Mpc -1 at the 1–2σ level with a covariance matrix derived from LyaCoLoRe mocks. We demonstrate a promising new approach for full-shape cosmological analyses of Ly α forest data from cosmological surveys such as eBOSS, the currently observing Dark Energy Spectroscopic Instrument and future surveys such as the Prime Focus Spectrograph, WEAVE-QSO, and 4MOST.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2025

Emulating the Lyman-Alpha forest 1D power spectrum from cosmological simulations: new models and constraints from the eBOSS measurement

We present the Lyssa suite of high-resolution cosmological simulations of the Lyman-α forest designed for cosmological analyses. These 18 simulations have been run using the Nyx code with 40963 hydrodynamical cells in a 120 Mpc (∼ 81 Mpc/h) comoving box and individually provide sub-percent level convergence of the Lyman-α forest 1d flux power spectrum. We build a Gaussian process emulator for the Lyssa simulations in the lym1d likelihood framework to interpolate the power spectrum at arbitrary parameter values. We validate this emulator based on leave-one-out tests and based on the parameter constraints for simulations outside of the training set. We also perform comparisons with a previous emulator, showing a percent level accuracy and a good recovery of the expected cosmological parameters. Using this emulator we derive constraints on the linear matter power spectrum amplitude and slope parameters A Lyα and n Lyα . While the best-fit Planck ΛCDM model has A Lyα = 8.79 and n Lyα = -2.363, from DR14 eBOSS data we find that A Lyα < 7.6 (95% CI) and n Lyα = -2.369 ± 0.008. The low value of A Lyα , in tension with Planck, is driven by the correlation of this parameter with the mean transmission of the Lyman-α forest. This tension disappears when imposing a well-motivated external prior on this mean transmission, in which case we find A Lyα = 9.8 ± 1.1 in accordance with Planck.

Walther, Michael↗
DOE OSTI2025

DESI DR1 Ly α 1D power spectrum: the Fast Fourier Transform estimator measurement

Here, we present the one-dimensional Lyman-α forest power spectrum measurement derived from the data release 1 (DR1) of the Dark Energy Spectroscopic Instrument (DESI). The measurement of the Lyman-α forest power spectrum along the line of sight from high-redshift quasar spectra provides information on the shape of the linear matter power spectrum, neutrino masses, and the properties of dark matter. In this work, we use a Fast Fourier Transform (FFT)-based estimator, which is validated on synthetic data in a companion paper. Compared to the FFT measurement performed on the DESI early data release, we improve the noise characterization with a cross-exposure estimator and test the robustness of our measurement using various data splits. We also refine the estimation of the uncertainties and now present an estimator for the covariance matrix of the measurement. Furthermore, we compare our results to previous high-resolution and eBOSS measurements. In another companion paper, we present the same DR1 measurement using the Quadratic Maximum Likelihood Estimator (QMLE). These two measurements are consistent with each other and constitute the most precise one-dimensional power spectrum measurement to date, while being in good agreement with results from the DESI early data release.

Lyman alpha forest↗
DOE OSTI2022

Evaluating Lyman- α constraints for general dark-matter velocity distributions: Multiple scales and cautionary tales

One of the most important observational constraints on possible models of dark-matter physics exploits the Lyman-α absorption spectrum associated with photons traversing the intergalactic medium. Because these data allow us to probe the linear matter power spectrum with great accuracy down to relatively small distance scales, finding ways of accurately evaluating such Lyman-α constraints across large classes of candidate models of dark-matter physics is of paramount importance. While such Lyman-α constraints have been evaluated for dark-matter models that give rise to relatively simple dark-matter velocity distributions, more complex models—particularly those whose dark-matter velocity distributions stretch across multiple scales—have recently been receiving increasing attention. In this paper, we undertake a study of the Lyman-α constraints associated with general dark-matter velocity distributions. Although such Lyman-α constraints are difficult to evaluate in principle, in practice there currently exist two classes of methods in the literature through which such constraints can be recast into forms which are easier to evaluate and which therefore allow a more rapid determination of whether a given dark-matter model is ruled in or out. Accordingly, we utilize both of these recasts in order to determine the Lyman-α bounds on different classes of dark-matter velocity distributions. Here we also develop a general method by which the results of these different recasts can be compared. For relatively simple dark-matter velocity distributions, we demonstrate that these two classes of recasts tend to align and give similar results. However, we find that the situation is far more complex for distributions involving multiple velocity scales: while these two classes of recasts continue to yield similar results within certain regions of parameter space, they nevertheless yield dramatically different results within precisely those regions of parameter space which are likely to be phenomenologically relevant. This, then, serves as a cautionary tale regarding the use of such recasts for complex dark-matter velocity distributions.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2026

Cosmological analysis of the DESI DR1 Lyα 1D power spectrum

We present the cosmological analysis of the one-dimensional Lyman-α flux power spectrum from the first data release of the Dark Energy Spectroscopic Instrument (DESI). We capture the dependence of the signal on cosmology and intergalactic medium physics using an emulator trained on a cosmological suite of hydrodynamical simulations, and we correct its predictions for the impact of astrophysical contaminants and systematics, many of these not considered in previous analyses. We employ this framework to constrain the amplitude and logarithmic slope of the linear matter power spectrum at k ★ = 0.009 km -1 s and redshift z = 3, obtaining Δ 2 ★ = 0.379 ± 0.032 and n ★ = -2.309 ± 0.019 https://github.com/igmhub/cobaya_lya_p1d. The robustness of these constraints is validated through the analysis of mocks and a large number of alternative data analysis variations, with cosmological parameters kept blinded throughout the validation process. We then combine our results with constraints from DESI BAO and temperature, polarization, and lensing measurements from Planck, ACT, and SPT-3G to set constraints on ΛCDM extensions. While our measurements do not significantly tighten the limits on the sum of neutrino masses from the combination of these probes, they sharpen the constraints on the effective number of relativistic species, N eff = 3.02 ± 0.10, the running of the spectral index, α s = 0.0014 ± 0.0041, and the running of the running, β s = -0.0006 ± 0.0048, by a factor of 1.18, 1.27, and 1.90, respectively. We conclude by outlining the improvements needed to fully reach the level of confidence implied by these uncertainties.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2025

Precision measurements of EFT parameters and BAO peak shifts for the Lyman- α forest

We present precision measurements of the bias parameters of the one-loop power spectrum model of the Lyman- α (Ly- α ) forest, derived within the effective field theory (EFT) of large-scale structure. We fit our model to the three-dimensional flux power spectrum measured from the ACCEL 2 hydrodynamic simulations. The EFT model fits the data with an accuracy of below 2% up to k = 2 h Mpc − 1 . Further, we analytically derive how nonlinearities in the three-dimensional clustering of the Ly- α forest introduce biases in measurements of the baryon acoustic oscillations (BAOs) scaling parameters in radial and transverse directions. From our EFT parameter measurements, we obtain a theoretical error budget of Δ α ∥ = − 0.2 % ( Δ α ⊥ = − 0.3 % ) for the radial (transverse) parameters at redshift z = 2.0 . This corresponds to a shift of − 0.3 % (0.1%) for the isotropic (anisotropic) distance measurements. We provide an estimate for the shift of the BAO peak for Ly- α -quasar cross-correlation measurements assuming analytical and simulation-based scaling relations for the nonlinear quasar bias parameters resulting in a shift of − 0.2 % ( − 0.1 % ) for the radial (transverse) dilation parameters, respectively. This analysis emphasizes the robustness of Ly- α forest BAO measurements to the theory modeling. We provide informative priors and an error budget for measuring the BAO feature—a key science driver of the currently observing Dark Energy Spectroscopic Instrument (DESI). Our work paves the way for full-shape cosmological analyses of Ly- α forest data from DESI and upcoming surveys such as the Prime Focus Spectrograph, WEAVE-QSO, and 4MOST. Published by the American Physical Society 2025

de Belsunce, Roger (ORCID:0000000336604028)↗
DOE OSTI2025

Forecasting the Ly-𝛼 forest × CMB lensing bispectrum from ACT, SO, S4, and DESI

We forecast the sensitivity of future correlations between cosmic microwave background (CMB) lensing and the Lyman-𝛼 forest power spectrum. This squeezed-limit bispectrum probes the connection between the Lyman-𝛼 transmission and the underlying large-scale matter density field. We recover the measured signal-to-noise (SNR) ratio obtained with Planck × BOSS, and forecast a SNR of 10.3, 14.8 and 20.2 for DESI combined with ACT, SO, and CMB-S4, respectively. For DESI and SO/CMB-S4, the correlation should be detectable at SNR ≥ 5 in 5 redshift bins, useful for distinguishing our signal from several contaminants. Indeed, our forecast is affected by large theoretical uncertainties in the current modeling of the signal and its contaminants, such as continuum misestimation bias or damped-Lyman-𝛼 absorbers. Quantifying these more accurately will be crucial to enable a reliable cosmological interpretation of this observable in future measurements. We attempt to enumerate the features required in future Lyman-𝛼 forest simulations required to do so.

Cosmic microwave background↗
DOE OSTI2026

Generation of lognormal synthetic Lyman-α forest spectra for P 1 D analysis

The one-dimensional flux power spectrum (P 1 D ) of the Lyman-α forest probes small-scale structure in the intergalactic medium (IGM) and is therefore sensitive to a variety of cosmological and astrophysical parameters. These include the amplitude and shape of the matter power spectrum, the thermal history of the IGM, the sum of neutrino masses, and potential small-scale fluctuations due to the nature of dark matter. However, P 1 D is also highly sensitive to observational and instrumental systematics, making accurate synthetic spectra essential for validating analyses and quantifying these effects, especially in high-volume surveys like the Dark Energy Spectroscopic Instrument (DESI). We present an efficient lognormal mock framework for generating one-dimensional Lyman-α forest spectra tailored for P 1 D analysis. Our method captures the redshift evolution of the mean transmitted flux and the scale-dependent shape and amplitude of the one-dimensional flux power spectrum by tuning Gaussian field correlations and transformation parameters. Across the DESI Early Data Release (EDR) redshift range (2.0 ≤ z ≤ 3.8), and a wide range of scales (10 -4 s km -1 ≤ k ≤ 1.0 s km -1 ), our mocks recover the mean flux evolution with redshift to sub-percent accuracy, and the P 1 D at the percent level. Additionally, we discuss potential extensions of this framework, such as the incorporation of astrophysical contaminants, continuum uncertainties, and instrumental effects. Such improvements would expand its utility in ongoing and upcoming surveys and enable a broader range of validation efforts and systematics studies for P 1 D inference and precision cosmology.

Lyman alpha forest↗
DOE OSTI2026

Cosmological neutrino mass: a frequentist overview in light of DESI

We derive constraints on the neutrino mass using a variety of recent cosmological datasets, including DESI BAO, the full-shape analysis of the DESI matter power spectrum and the one-dimensional power spectrum of the Lyman-α forest (P1D) from eBOSS quasars as well as the cosmic microwave background (CMB). The constraints are obtained in the frequentist formalism by constructing profile likelihoods and applying the Feldman-Cousins prescription to compute confidence intervals. This method avoids potential prior and volume effects that may arise in a comparable Bayesian analysis. Parabolic fits to the profiles allow one to distinguish changes in the upper limits from variations in the constraining power σ of the different data combinations. We find that all profiles in the ΛCDM model are cut off by the ∑m ν ≥ 0 bound, meaning that the corresponding parabolas reach their minimum in the unphysical sector. The most stringent 95% C.L. upper limit is obtained by the combination of DESI DR2 BAO, Planck PR4 and CMB lensing at 53 meV, below the minimum of 59 meV set by the normal ordering. The corresponding constraining power σ is 43 meV, which highlights the importance of the cut-off by negative values in the determination of the upper limit. Extending ΛCDM to non-zero curvature and w 0 w a CDM relaxes the constraints past 59 meV again, but only w 0 w a CDM exhibits profiles with a minimum at a positive value. Additionally, we extend the formalism to constrain the lightest neutrino mass. For DESI DR2 BAO, Planck PR4 and CMB lensing, we find confidence limits at 20 and 19 meV for normal and inverted ordering, respectively. Using a combination of DESI DR1 full-shape, BBN and eBOSS Lyman-α P1D, we successfully constrain the neutrino mass independently of the CMB. This combination yields m l ≤ 97 and 98 meV in the normal and inverted orderings, and total neutrino mass ∑m ν ≤ 285 meV (95% C.L.). The addition of DESI full-shape or Lyman-α P1D to CMB and DESI BAO results in small but noticeable improvement of the constraining power of the data. Lyman-α free-streaming measurements especially improve the constraint. Since they are based on eBOSS data, this sets a promising precedent for upcoming DESI data.

Frequentist statistics↗
DOE OSTI2025

Constraints on dark photon dark matter from Lyman- α forest simulations and an ultrahigh signal-to-noise quasar spectrum

The ultralight dark photon is a well-motivated, hypothetical dark matter candidate. In a dilute plasma, they can resonantly convert into photons, and heat up the intergalactic medium between galaxies. In this work, we explore the dark photon dark matter parameter space by comparing synthetic Lyman- α forest data from cosmological hydrodynamical simulations to observational data from VLT/UVES of the quasar HE0940-1050 ( z em = 3.09 ). We use a novel flux normalization technique that targets underdense gas, reshaping the flux probability distribution. Not only do we place robust constraints on the kinetic mixing parameter of dark photon dark matter, but notably our findings suggest that this model can still reconcile simulated and observed Doppler parameter distributions of z ∼ 0 Lyman- α lines, as seen by HST/COS. This work opens new pathways for the use of the Lyman- α forest to explore new physics, and can be extended to other scenarios such as primordial black hole evaporation, dark matter decay, and annihilation.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2021

An emulator for the Lyman-α forest in beyond-ΛCDM cosmologies

Interpreting observations of the Lyman-α forest flux power spectrum requires interpolation between a small number of expensive simulations. We present a Gaussian process emulator modelling the 1D flux power spectrum as a function of the amplitude and slope of the small-scale linear matter power spectrum, and the state of the intergalactic medium at the epoch of interest (2 < z < 4). This parameterisation enables the prediction of the flux power spectrum in extended cosmological models that are not explicitly included in the training set, eliminating the need to construct bespoke emulators for a number of extensions to ΛCDM. Our emulator is appropriate for cosmologies in which the linear matter power spectrum is described to percent level accuracy by just an amplitude and slope across the epoch of interest, and in the regime probed by eBOSS/DESI data. We demonstrate this for massive neutrino cosmologies, where the emulator is able to predict the flux power spectrum in a Σm ν = 0.3 eV neutrino cosmology to sub-percent accuracy, without including massive neutrinos in the training simulations. Further parameters would be required to describe models with sharp features in the linear power, such as warm or light axion dark matter. This work will facilitate the combination of upcoming DESI data with observations of the cosmic microwave background, to obtain constraints on neutrino mass and other extensions to ΛCDM cosmology.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2020

Redshift-space streaming velocity effects on the Lyman- α forest baryon acoustic oscillation scale

The baryon acoustic oscillation (BAO) scale acts as a standard ruler for measuring cosmological distances and has therefore emerged as a leading probe of cosmic expansion history. However, any physical effect that alters the length of the ruler can lead to a bias in our determination of distance and expansion rate. One of these physical effects is the streaming velocity, the relative velocity between baryons and dark matter in the early Universe, which couples to the BAO scale due to their common origin in acoustic waves at recombination. In this work, we investigate the impact of streaming velocity on the BAO feature of the Lyman- α forest auto-power spectrum, one of the main tracers being used by the recently commissioned Dark Energy Spectroscopic Instrument (DESI). To do this, we develop a perturbative model for Lyman- α flux fluctuations which is complete to second order for a certain set of fields, and applicable to any redshift-space tracer of structure since it is based only on symmetry considerations. We find that there are 8 biasing coefficients through second order. We find streaming velocity-induced shifts in the BAO scale of 0.081%–0.149% (transverse direction) and 0.053%–0.058% (radial direction), depending on the model for the biasing coefficients used. These are smaller than, but not negligible compared to, the DESI Lyman- α BAO error budget, which is 0.46% on the overall scale. Overall, the sensitivity of these results to our choice of bias parameters underscores the need for future work to measure the higher-order biasing coefficients from simulations, especially for future experiments beyond DESI.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2023

Compressing the Cosmological Information in One-dimensional Correlations of the Lyman-$\alpha$ Forest

Observations of the Lyman-α forest from spectroscopic surveys such as the Baryon Oscillation Spectroscopic Survey or its extension, eBOSS, or the ongoing Dark Energy Spectroscopic Instrument (DESI) survey offer a unique window to study the growth of structure on megaparsec scales. Interpretation of these measurements is a complicated task, requiring hydrodynamical simulations to model and marginalize over the thermal and ionization state of the intergalactic medium. This complexity has limited the use of Lyα clustering measurements in joint cosmological analyses. In this work we show that the cosmological information content of the one-dimensional power spectrum (P 1D ) of the Lyman-α forest can be compressed into a simple two-parameter likelihood without any significant loss of constraining power. We simulate P 1D measurements from DESI using hydrodynamical simulations and show that the compressed likelihood is model independent and lossless, recovering unbiased results even in the presence of massive neutrinos or running of the primordial power spectrum.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2025

DESI DR1 Lyα 1D power spectrum: the optimal estimator measurement

The one-dimensional power spectrum P 1D of Lyα forest offers rich insights into cosmological and astrophysical parameters, including constraints on the sum of neutrino masses, warm dark matter models, and the thermal state of the intergalactic medium. We present the measurement of P 1D using the optimal quadratic maximum likelihood estimator applied to over 300,000 Lyα quasars from Data Release 1 (DR1) of the Dark Energy Spectroscopic Instrument (DESI) survey. This sample represents the largest to date for P 1D measurements and is larger than the Extended Baryon Oscillation Spectroscopic Survey (eBOSS) by a factor of 1.7. We conduct a meticulous investigation of instrumental and analysis systematics and quantify their impact on P 1D . This includes the development of a cross-exposure estimator that eliminates the need to model the pipeline noise and has strong potential for future P 1D measurements. We also present new insights into metal contamination through the 1D correlation function. Using a fitting function we measure the evolution of the Lyα forest bias with high precision: b F (z) = (-0.218 ± 0.002) × ((1 + z)/4) 2.96±0.06 . In a companion validation paper, we substantially extend our previous suite of CCD image simulations to quantify the pipeline's exquisite performance accurately. In another companion paper, we present DR1 P 1D measurements using the Fast Fourier Transform (FFT) approach to power spectrum estimation. These two measurements produce a forest bias parameter that differs by 2.2 sigma. However, our model is simplistic, so this disagreement will be investigated in future work.

Lyman alpha forest↗
DOE OSTI2026

DESI DR1 Ly α 1D power spectrum: Validation of estimators

The Data Release 1 (DR1) of the Dark Energy Spectroscopic Instrument (DESI) is the largest sample to date for small-scale Lyα forest cosmology, accessed through its one-dimensional power spectrum (P 1D ). The Lyα forest P 1D is extracted from quasar spectra that are highly inhomogeneous (both in wavelength and between quasars) in noise properties due to intrinsic properties of the quasar, atmospheric and astrophysical contamination, and also sensitive to low-level details of the spectral extraction pipeline. We employ two estimators in DR1 analysis to measure P 1D : the optimal estimator and the fast Fourier transform (FFT) estimator. To ensure robustness of our DR1 measurements, we validate these two power spectrum and covariance matrix estimation methodologies against the challenging aspects of the data. First, using a set of 20 synthetic 1D realizations of DR1, we derive the masking bias corrections needed for the FFT estimator and the continuum fitting bias needed for both estimators. We demonstrate that both estimators, including their covariances, are unbiased with these corrections using the Kolmogorov-Smirnov test. Second, we substantially extend our previous suite of CCD image simulations to include 675,000 quasars, allowing us to accurately quantify the pipeline's performance. This set of simulations reveals biases at the highest k values, corresponding to a resolution error of a few percent. We base the resolution systematics error budget of DR1 P 1D on these values, but do not derive corrections from them since the simulation fidelity is insufficient for precise corrections.

Lyman alpha forest↗