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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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Pavilion 2 Feature Additions [Slides]

Pavilion 2 is a critical component of system testing for LANL HPC systems. Pavilion 2 is system independent, which allows for the creation of a large suite of generalized tests than can be applied to multiple systems. These additions to Pavilion 2 improve our ability to test systems and diagnose issues. With such a large suite, running the proper tests when diagnosing and fixing a system can be difficult, as well as locating old tests for reference. Test configurations may contain several permutations of a test, not all of which may apply to a given system. The ability to run sets of test permutations lets the tester focus on specific parts of the test without having to edit the test configurations or run extraneous tests. The addition of the filter argument improves the ability to find test results based on test attributes, including past tests. Pavilion 2's system independence is largely based on various layers of configuration files. Configuration files for the host, test, and modes exist to allow generalized testing. The operating system configuration layer can provide helpful OS defaults to a test. Survey, a collection and reporting tool, can help us gauge the performance of a system as well as diagnose issues. The addition of a Survey mode in Pavilion 2 makes running tests with Survey very straightforward. The Survey results are combined with Pavilion 2's test results to make it easy to access.

97 MATHEMATICS AND COMPUTING↗

Pavilion 2 Feature Additions [Slides]

Pavilion 2 is a critical component of system testing for LANL HPC systems. Pavilion 2 is system independent, which allows for the creation of a large suite of generalized tests than can be applied to multiple systems. These additions to Pavilion 2 improve our ability to test systems and diagnose issues. With such a large suite, running the proper tests when diagnosing and fixing a system can be difficult, as well as locating old tests for reference. Test configurations may contain several permutations of a test, not all of which may apply to a given system. The ability to run sets of test permutations lets the tester focus on specific parts of the test without having to edit the test configurations or run extraneous tests. The addition of the filter argument improves the ability to find test results based on test attributes, including past tests. Pavilion 2's system independence is largely based on various layers of configuration files. Configuration files for the host, test, and modes exist to allow generalized testing. The operating system configuration layer can provide helpful OS defaults to a test. Survey, a collection and reporting tool, can help us gauge the performance of a system as well as diagnose issues. The addition of a Survey mode in Pavilion 2 makes running tests with Survey very straightforward. The Survey results are combined with Pavilion 2's test results to make it easy to access.

97 MATHEMATICS AND COMPUTING↗

Innovative large overbraided carbon fiber composite beams in historical Friendship Bell Pavilion

The International Friendship Bell Pavilion located in the City of Oak Ridge, Tennessee symbolizes the spirit of the peace and friendship shared by the city of Oak Ridge and city of Naka, Japan. The Bell Pavilion features an 8000-pound bronze cast bell along with futuristic materials and advanced manufacturing technologies. The team has developed innovative overbraided carbon fiber arched beams in conjunction with the bronze bell. Carbon fiber was utilized in these beams because of its lightweight, strong, stiff, and durable characteristics. A sandwich design used a high-performance foam core, overbraided with triaxial carbon fibers. This is the world’s largest overbraided composite structure for parks and recreation. For the first time in such an application, 17 free floating, 33-foot (10 m) long arched carbon fiber composite beams cantilever from a central concrete-steel superstructure over the bronze bell. The arc radius of the bottom of each beam is uniquely different giving an appearance of an open dome when standing underneath the structure.

Parks and Recreation↗

Pavilion Basics [Slides]

This presentation will be used as part of training on the LANL owned (but open-sourced) Pavilion software.

97 MATHEMATICS AND COMPUTING↗

Solar Energy Extension Project

The town of Stratford plans to develop and own a 6 kilowatt (kW) solar array on the roof of a municipal-owned public pavilion on the town green. A SolarEdge level 2 EV charging station will be installed at the pavilion to be used by the public. The charging station will have one charging port. The town will install 3 air source heat pumps in the library located adjacent to the pavilion to reduce the use of propane to heat the library. The town will install 4 air source heat pumps in the Town Hall to reduce the use of #2 heating oil to heat the facility. The 6 kW solar array will provide electricity to the library to offset electricity usage, and when an EV plugs into the charging station the solar will provide electricity to the charging station. There is no ground disturbance or ground trenching associated with this project. The 6 kW solar array on the roof of the pavilion will include 20 (390) watt all black panels. A SolarEdge level 2 EV charger will be installed at the pavilion with the 240 V inverter. The solar array will provide electricity to the library and when a vehicle plugs into the EV charger the solar array will switch to power the charger. Any excess electricity that is generated by the array and not used by the library or the EV charger will be fed onto the grid and the town will receive a net metering credit applied towards future consumption. There is no ground disturbance associated with the EV charger or solar array, and the town will install signage to direct the public to the charger. The library will install 2 (18,000) BTU ductless air source heat pumps and 1 (24,000) BTU unit. This will significantly reduce the amount of propane required to heat the library. The Town Hall will install 2 (36,000) BTU ductless air source heat pumps and 2 (9,000) BTU units to reduce the amount of #2 heating oil required to heat the building.

14 SOLAR ENERGY↗

Parallel File System I/O Performance Testing On LANL Clusters

These are slides from a presentation on parallel file system I/O performance testing on LANL clusters. I/O is a known bottleneck for HPC applications. Performance optimization of I/O is often required. This summer project entailed integrating IOR under Pavilion and automating the results analysis. The slides cover the following topics: scope of the work, tools utilized, IOR-Pavilion test workflow, build script, IOR parameters, how parameters are passed to IOR, *run_ior: functionality, Python IOR-Output Parser, Splunk data format, Splunk dashboard and features, and future work.

97 MATHEMATICS AND COMPUTING↗

Control and prevention measures for legionellosis in hospitals: A cross-sectional survey in Italy

Highlights: • Legionellosis risk is high in Italian hospitals with many hospitalizations. • Legionella contamination in the water system was assessed in 97% of hospitals. • Risk assessment was performed in 73% of hospitals but only 53% had a dedicated team. • Measures to reduce legionellosis risk were adopted in 93.3% of hospitals. • Training courses on Legionnaires’ disease were planned in 36.5% of hospitals. Risk assessment, environmental monitoring, and the disinfection of water systems are the key elements in preventing legionellosis risk. The Italian Study Group of Hospital Hygiene of the Italian Society of Hygiene, Preventive Medicine, and Public Health and the Italian Multidisciplinary Society for the Prevention of Health Care-Associated Infections carried out a national cross-sectional survey to investigate the measures taken to prevent and control legionellosis in Italian hospitals. A multiple-choice questionnaire was developed, comprising 71 questions regarding hospital location, general characteristics, clinical and environmental surveillance, and control and preventive measures for legionellosis in 2015. Overall, 739 hospitals were enrolled from February to June 2017, and 178 anonymous questionnaires were correctly completed and evaluated (response rate: 24.1%). The survey was conducted using the SurveyMonkey® platform, and the data were analyzed using Stata 12 software. Of the participating hospitals, 63.2% reported at least one case of legionellosis, of which 28.2% were of proven nosocomial origin. The highest case numbers were reported in the Northern Italy, in hospitals with a pavilion structure or cooling towers, and in hospitals with higher numbers of beds, wards and operating theaters. Laboratory diagnosis was performed using urinary antigen testing alone (31.9%), both urinary antigen testing and single antibody titer (17.8%), or with seroconversion also added (21.5%). Culture-based or molecular investigations were performed in 28.8% and 22.1% of the clinical specimens, respectively. The water systems were routinely tested for Legionella in 97.4% of the hospitals, 62% of which detected a positive result (> 1000 cfu/L). Legionella pneumophila serogroup 2–15 was the most frequently isolated species (58.4%). The most common control measures were the disinfection of the water system (73.7%), mostly through thermal shock (37.4%) and chlorine dioxide (34.4%), and the replacement (69.7%) or cleaning (70.4%) of faucets and showerheads. A dedicated multidisciplinary team was present in 52.8% of the hospitals, and 73% of the hospitals performed risk assessment. Targeted training courses were organized in 36.5% of the hospitals, involving nurses (30.7%), physicians (28.8%), biologists (21.5%), technicians (26.4%), and cleaners (11%). Control and prevention measures for legionellosis are present in Italian hospitals, but some critical aspects should be improved. More appropriate risk assessment is necessary, especially in large facilities with a high number of hospitalizations. Moreover, more sensitive diagnostic tests should be used, and dedicated training courses should be implemented.

54 ENVIRONMENTAL SCIENCES↗

Microbial diversity and biomarker analysis of modern freshwater microbialites from Laguna Bacalar, Mexico

Laguna Bacalar is a sulfate-rich freshwater lake on the Yucatan Peninsula that hosts large microbialites. High sulfate concentrations distinguish Laguna Bacalar from other freshwater microbialite sites such as Pavilion Lake and Alchichica, Mexico, as well as from other aqueous features on the Yucatan Peninsula. We report that while cyanobacterial populations have been described here previously, this study offers a more complete characterization of the microbial populations and corresponding biogeochemical cycling using a three-pronged geobiological approach of microscopy, high-throughput DNA sequencing, and lipid biomarker analyses. We identify and compare diverse microbial communities of Alphaproteobacteria, Deltaproteobacteria, and Gammaproteobacteria that vary with location along a bank-to-bank transect across the lake, within microbialites, and within a neighboring mangrove root agglomeration. In particular, sulfate-reducing bacteria are extremely common and diverse, constituting 7%-19% of phylogenetic diversity within the microbialites, and are hypothesized to significantly influence carbonate precipitation. In contrast, Cyanobacteria account for less than 1% of phylogenetic diversity. The distribution of lipid biomarkers reflects these changes in microbial ecology, providing meaningful biosignatures for the microbes in this system. Polysaturated short-chain fatty acids characteristic of cyanobacteria account for <3% of total abundance in Laguna Bacalar microbialites. By contrast, even short-chain and monounsaturated short-chain fatty acids attributable to both Cyanobacteria and many other organisms including types of Alphaproteobacteria and Gammaproteobacteria constitute 43%-69% and 17%-25%, respectively, of total abundance in microbialites. Lastly, while cyanobacteria are the largest and most visible microbes within these microbialites and dominate the mangrove root agglomeration, it is clear that their smaller, metabolically diverse associates are responsible for significant biogeochemical cycling in this microbialite system.

58 GEOSCIENCES↗

AmeriFlux FLUXNET-1F US-ORv Olentangy River Wetland Research Park

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-ORv Olentangy River Wetland Research Park. This is the FLUXNET version of the carbon flux data for the site US-ORv Olentangy River Wetland Research Park produced by applying the standard ONEFlux (1F) software. Site Description - The ORWRP site is a 21-ha large-scale, long-term wetland campus facility that is owned by Ohio State University. It is designed to provide teaching, research, and service related to wetland and river science and ecological engineering. The site has been developed in several phases: Phase 1 (1992 - 1994) - Construction of two 2.5-acre deepwater marshes and a river water delivery system began, with pumps installed on the floodplain to bring water from the Olentangy River. In May 1994, one wetland was planted with marsh vegetation, while the other remained as an unplanted control; Phase 2 (1994 - 1999) - Development of a research and teaching infrastructure took place with the construction of boardwalks, a pavilion, and a compound. The creation of the 7-acre naturally flooded oxbow was also included; Phase 3 (2000 - 2003) - As a research building was created, three additional wetlands were created in the vicinity of the building, including a stormwater wetland that receives runoff from the roof of the building; Phase 4 - The current phase involves research access to the Olentangy River.

Bohrer, Gil↗

The Complete Genome and Physiological Analysis of the Eurythermal Firmicute Exiguobacterium chiriqhucha Strain RW2 Isolated From a Freshwater Microbialite, Widely Adaptable to Broad Thermal, pH, and Salinity Ranges

Members of the genus Exiguobacterium are found in diverse environments from marine and fresh waters to permafrost and hot springs. As such, they can grow at a wide range of temperature, pH, salinity, and heavy-metal concentrations. Here we propose Exiguobacterium pavilionensis sp. nov. strain RW2 using phylogenetic, biochemical, and genome analyses. Isolated from a cold freshwater microbialite in Pavilion Lake, British Columbia, E. pavilionensis can grow between 4 and 50 °C, the broadest temperature range reported for the genus. The three Mbp circular genome includes a large set of core genes associated with stress responses to temperature, salinity and heavy metals that are conserved among all sequenced strains of Exiguobacterium spp., and which may explain their distribution across such a wide range of ecosystems. We also nominate potential pathways involved in carbonate precipitation (and therefore microbialite formation), as well as carotenoid biosynthesis that could lend the characteristic orange color to members of the genus. The unexpectedly high thermal tolerance of this cold-water bacterium, as well as its latent flagellum synthesis operons, suggest that this species may have had its evolutionary origins in a much warmer environment in which motility was important. These results provide further insight into the potential of Exiguobacterium to exploit a wide range of environmental conditions.

59 BASIC BIOLOGICAL SCIENCES↗